diff options
| author | manifest <robqiao@users.noreply.github.com> | 2020-10-29 12:15:24 +1030 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-10-28 20:45:24 -0500 |
| commit | b4a0a43d980f23623101ca5bbaf34d3791d239df (patch) | |
| tree | b007272da010159dd8d1aff3b48e3cf6f4bd600c /var | |
| parent | 3243e904a84042522d1b298ec7ddd75574eddf4b (diff) | |
| download | spack-b4a0a43d980f23623101ca5bbaf34d3791d239df.tar.gz spack-b4a0a43d980f23623101ca5bbaf34d3791d239df.tar.bz2 spack-b4a0a43d980f23623101ca5bbaf34d3791d239df.tar.xz spack-b4a0a43d980f23623101ca5bbaf34d3791d239df.zip | |
PopLDdecay package + (#17802)
* poplddecay bio
* flake8 debug
* bin PATH correction
* build step opt
* BUILD_PATH fix
* retro implementation + style fix
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/poplddecay/package.py | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/poplddecay/package.py b/var/spack/repos/builtin/packages/poplddecay/package.py new file mode 100644 index 0000000000..6dbf55dc27 --- /dev/null +++ b/var/spack/repos/builtin/packages/poplddecay/package.py @@ -0,0 +1,28 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Poplddecay(MakefilePackage): + """ + PopLDdecay: a fast and effective tool for linkage disequilibrium + decay analysis based on variant call format files + """ + + homepage = "https://github.com/BGI-shenzhen/PopLDdecay" + url = "https://github.com/BGI-shenzhen/PopLDdecay/archive/v3.41.tar.gz" + + maintainers = ['robqiao'] + + version('3.41', sha256='09a1ad01581520b84ef73eaa0b199879c84e77b259ba6ff06dbca5fcfc090457') + version('3.40', sha256='5070930166fb90f7eaaa4b87c4430caa8a827d79c54683e2f56434a4daf69778') + + build_directory = 'src' + + build_targets = ['all', 'clean'] + + def install(self, spec, prefix): + install_tree('bin', prefix.bin) |