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authordownloadico <download@carc.unm.edu>2023-01-23 18:37:40 -0700
committerGitHub <noreply@github.com>2023-01-23 17:37:40 -0800
commitb5fc217dc287b6b5929e8a1fbd3a719275919f72 (patch)
tree2639007c01e4af179ba6fceca870c1165f41a5d2 /var
parenta4b8753456706e2727daa45b32d120ce825099be (diff)
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actually add samtools 1.16.1 and fix Copyright dates on samtools, bcftools, and htslib (#35118)
* samtools: add version 1.16.1 (for real this time!) also, fix Copyright date * bcftools and htslib: fix Copyright date
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/bcftools/package.py2
-rw-r--r--var/spack/repos/builtin/packages/htslib/package.py2
-rw-r--r--var/spack/repos/builtin/packages/samtools/package.py3
3 files changed, 4 insertions, 3 deletions
diff --git a/var/spack/repos/builtin/packages/bcftools/package.py b/var/spack/repos/builtin/packages/bcftools/package.py
index a74a54a733..d329cb5111 100644
--- a/var/spack/repos/builtin/packages/bcftools/package.py
+++ b/var/spack/repos/builtin/packages/bcftools/package.py
@@ -1,4 +1,4 @@
-# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py
index 394f3cf6ff..7305661d0c 100644
--- a/var/spack/repos/builtin/packages/htslib/package.py
+++ b/var/spack/repos/builtin/packages/htslib/package.py
@@ -1,4 +1,4 @@
-# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
diff --git a/var/spack/repos/builtin/packages/samtools/package.py b/var/spack/repos/builtin/packages/samtools/package.py
index 28385976f6..6f3d530c76 100644
--- a/var/spack/repos/builtin/packages/samtools/package.py
+++ b/var/spack/repos/builtin/packages/samtools/package.py
@@ -1,4 +1,4 @@
-# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -14,6 +14,7 @@ class Samtools(Package):
homepage = "https://www.htslib.org"
url = "https://github.com/samtools/samtools/releases/download/1.13/samtools-1.13.tar.bz2"
+ version("1.16.1", sha256="2fa0a25f78594cf23d07c9d32d5060a14f1c5ee14d7b0af7a8a71abc9fdf1d07")
version("1.15.1", sha256="708c525ac76b0532b25f14aadea34a4d11df667bc19bf0a74dae617d80526c6e")
version("1.15", sha256="35d945a5eee9817a764490870474f24e538400b0397b28f94247a5b91447215d")
version("1.14", sha256="9341dabaa98b0ea7d60fd47e42af25df43a7d3d64d8e654cdf852974546b7d74")