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authorGlenn Johnson <glenn-johnson@uiowa.edu>2022-06-07 09:12:51 -0500
committerGitHub <noreply@github.com>2022-06-07 16:12:51 +0200
commitffd63c5de1d9586920b70b86ca5a8ec71f17b0c2 (patch)
tree397c256223039e10b8f173739451596419a15b4f /var
parented263615d7fad8d7beaef63949cc380e6a4cc2c4 (diff)
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R ecosystem: cran updates (#31004)
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-rw-r--r--var/spack/repos/builtin/packages/r-statnet-common/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-stringfish/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-styler/package.py10
-rw-r--r--var/spack/repos/builtin/packages/r-subplex/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-survival/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-svglite/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-systemfonts/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-tclust/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-testthat/package.py4
-rw-r--r--var/spack/repos/builtin/packages/r-th-data/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-tibble/package.py3
-rw-r--r--var/spack/repos/builtin/packages/r-tidycensus/package.py3
-rw-r--r--var/spack/repos/builtin/packages/r-tidygraph/package.py6
-rw-r--r--var/spack/repos/builtin/packages/r-tidyr/package.py4
-rw-r--r--var/spack/repos/builtin/packages/r-tidyselect/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-tidytree/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-tigris/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-tinytex/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-truncnorm/package.py4
-rw-r--r--var/spack/repos/builtin/packages/r-tseries/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-tsne/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-tzdb/package.py3
-rw-r--r--var/spack/repos/builtin/packages/r-udunits2/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-usethis/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-uuid/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-v8/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-vctrs/package.py5
-rw-r--r--var/spack/repos/builtin/packages/r-vegan/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-vgam/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-waldo/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-webshot/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-wgcna/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-withr/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-xfun/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-xgboost/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-xml/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-zcompositions/package.py1
-rw-r--r--var/spack/repos/builtin/packages/r-zoo/package.py1
295 files changed, 608 insertions, 49 deletions
diff --git a/var/spack/repos/builtin/packages/r-ade4/package.py b/var/spack/repos/builtin/packages/r-ade4/package.py
index 54d7f54efe..c0b2887a8d 100644
--- a/var/spack/repos/builtin/packages/r-ade4/package.py
+++ b/var/spack/repos/builtin/packages/r-ade4/package.py
@@ -19,6 +19,7 @@ class RAde4(RPackage):
cran = "ade4"
+ version('1.7-19', sha256='c85111881ff93a261ca34a5b5ef313d1c0ff9b84f0b23596bc56cfa696f165ef')
version('1.7-18', sha256='ecb6f4c42c60f39702aa96f454bb536a333049c9608ee2b6bdf8795e059cc525')
version('1.7-16', sha256='9bd7a25ff4fe30a32fd8f6b71909f4c638a0e2f002fc8303c0a4795423385590')
version('1.7-13', sha256='f5d0a7356ae63f82d3adb481a39007e7b0d70211b8724aa686af0c89c994e99b')
diff --git a/var/spack/repos/builtin/packages/r-adegenet/package.py b/var/spack/repos/builtin/packages/r-adegenet/package.py
index 58dc9402e5..77cb8e9e4e 100644
--- a/var/spack/repos/builtin/packages/r-adegenet/package.py
+++ b/var/spack/repos/builtin/packages/r-adegenet/package.py
@@ -21,6 +21,7 @@ class RAdegenet(RPackage):
cran = "adegenet"
+ version('2.1.6', sha256='7823de4933634cb887481fe4b12cf2faacbaa1b4b66939584d10fcb7ce2da26b')
version('2.1.5', sha256='e4eee8c41dae6cb0841db74ec6f9adb2580873f3e313471f37df58324c1857f2')
version('2.1.3', sha256='0790114ecb22642683b5be1f4b3a6a49856e06dc2f9e21b9cba4390c2257f6c6')
version('2.1.1', sha256='3043fe5d731a38ff0e266f090dcda448640c3d0fd61934c76da32d082e5dce7a')
diff --git a/var/spack/repos/builtin/packages/r-adespatial/package.py b/var/spack/repos/builtin/packages/r-adespatial/package.py
index 394cd9716e..526197addc 100644
--- a/var/spack/repos/builtin/packages/r-adespatial/package.py
+++ b/var/spack/repos/builtin/packages/r-adespatial/package.py
@@ -17,6 +17,7 @@ class RAdespatial(RPackage):
cran = "adespatial"
+ version('0.3-16', sha256='987bd6e0bc6a32ac8e678338ffbbd88580007c4916129b51da681c331818a821')
version('0.3-14', sha256='a2ef7549c1ed7a23651716c633b25eaff468af8ccbf2e9fcd164e485984cbfbf')
version('0.3-8', sha256='e3fd3209ce3f0a862a0794187e8c884f1697c87c96e569a2f51f252e00022906')
diff --git a/var/spack/repos/builtin/packages/r-afex/package.py b/var/spack/repos/builtin/packages/r-afex/package.py
index d7ceb0fdd6..03ebc28bd3 100644
--- a/var/spack/repos/builtin/packages/r-afex/package.py
+++ b/var/spack/repos/builtin/packages/r-afex/package.py
@@ -24,6 +24,7 @@ class RAfex(RPackage):
cran = "afex"
+ version('1.1-1', sha256='66011599b193ebbb3bd241eb7200bd68ac4b5d2d1df84e63e9fdd72fb4110427')
version('1.0-1', sha256='6febc34b87a1109f5cbcd213c08d2b7b3e9cf99065fa41c19bc88ac99fb104cc')
version('0.28-1', sha256='cfb0b79bfa01b590afc3354a5b2ad3640d2f4974b036d6c256fa8e684bc69c2e')
diff --git a/var/spack/repos/builtin/packages/r-animation/package.py b/var/spack/repos/builtin/packages/r-animation/package.py
index bf7eeccb8a..66067bdd22 100644
--- a/var/spack/repos/builtin/packages/r-animation/package.py
+++ b/var/spack/repos/builtin/packages/r-animation/package.py
@@ -26,6 +26,6 @@ class RAnimation(RPackage):
depends_on('r@2.14:', type=('build', 'run'))
depends_on('r-magick', type=('build', 'run'), when='@2.6:')
depends_on('imagemagick')
- depends_on('texlive')
+ depends_on('texlive@2019:')
depends_on('swftools')
depends_on('ffmpeg')
diff --git a/var/spack/repos/builtin/packages/r-aod/package.py b/var/spack/repos/builtin/packages/r-aod/package.py
index bf00c7dee2..f5fe7d3ad3 100644
--- a/var/spack/repos/builtin/packages/r-aod/package.py
+++ b/var/spack/repos/builtin/packages/r-aod/package.py
@@ -17,6 +17,7 @@ class RAod(RPackage):
cran = "aod"
+ version('1.3.2', sha256='9b85be7b12b31ac076f2456853a5b18d8a79ce2b86d00055264529a0cd28515c')
version('1.3.1', sha256='052d8802500fcfdb3b37a8e3e6f3fbd5c3a54e48c3f68122402d2ea3a15403bc')
depends_on('r@2.10:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-ape/package.py b/var/spack/repos/builtin/packages/r-ape/package.py
index 671871ea8a..5b26bee4cf 100644
--- a/var/spack/repos/builtin/packages/r-ape/package.py
+++ b/var/spack/repos/builtin/packages/r-ape/package.py
@@ -27,6 +27,7 @@ class RApe(RPackage):
cran = "ape"
+ version('5.6-2', sha256='9b62450a0390a1f07df007d348ad4cedcd814d42cb11c5a300ed33550fd41257')
version('5.6-1', sha256='25401e036576eed1200e15bf68879ccd85611303a3508b989e15164cd4c0f7f7')
version('5.4-1', sha256='f0316c8e74ce900053e8b3e8c9322b9d10e7730f3be2150365f74630bee7eee4')
version('5.3', sha256='08b0df134c523feb00a86896d1aa2a43f0f0dab20a53bc6b5d6268d867988b23')
diff --git a/var/spack/repos/builtin/packages/r-aplot/package.py b/var/spack/repos/builtin/packages/r-aplot/package.py
index 6d4d238fd0..dca11c88d3 100644
--- a/var/spack/repos/builtin/packages/r-aplot/package.py
+++ b/var/spack/repos/builtin/packages/r-aplot/package.py
@@ -18,11 +18,15 @@ class RAplot(RPackage):
cran = "aplot"
+ version('0.1.6', sha256='7d69d1968bc613d8ceccc05c53362b0f62b632e1c6ef5100c91b65b15afa200c')
+ version('0.1.4', sha256='cde9dfc1c6b38e370c1f7338651c37727efa57d52b646fec6b021855809492ac')
version('0.1.2', sha256='899c4d101ddcedb1eba9803d78cf02288b63de25e2879add8add1165167509f0')
- depends_on('r-ggfun@0.0.4:', type=('build', 'run'))
+ depends_on('r-ggfun@0.0.4:', type=('build', 'run'), when='@0.1.2:')
+ depends_on('r-ggfun@0.0.6:', type=('build', 'run'), when='@0.1.4:')
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-ggplotify', type=('build', 'run'))
depends_on('r-patchwork', type=('build', 'run'))
depends_on('r-magrittr', type=('build', 'run'))
- depends_on('r-yulab-utils', type=('build', 'run'))
+
+ depends_on('r-yulab-utils', type=('build', 'run'), when='@0.1.2')
diff --git a/var/spack/repos/builtin/packages/r-argparse/package.py b/var/spack/repos/builtin/packages/r-argparse/package.py
index 56ab2cd0ca..1ab2e1e1a2 100644
--- a/var/spack/repos/builtin/packages/r-argparse/package.py
+++ b/var/spack/repos/builtin/packages/r-argparse/package.py
@@ -15,6 +15,7 @@ class RArgparse(RPackage):
cran = "argparse"
+ version('2.1.5', sha256='83e112beb47733849980b286d93ac930f0cbe6ac78fcb94fc9f6b0eea882658d')
version('2.1.3', sha256='aeda31a54a8d7a0a511cfbf7c5868637e129922671d43938165867437fb6a66e')
version('2.0.3', sha256='d26139c610ea0adf8d6632699cd34c4595ae3e7963bfc7a00cb3b7504f2059b0')
version('2.0.1', sha256='949843920d14fc7c162aedab331a936499541736e7dafbb103fbfd79be8147ab')
diff --git a/var/spack/repos/builtin/packages/r-assertive-properties/package.py b/var/spack/repos/builtin/packages/r-assertive-properties/package.py
index 73fd37eae6..b0e011d7d8 100644
--- a/var/spack/repos/builtin/packages/r-assertive-properties/package.py
+++ b/var/spack/repos/builtin/packages/r-assertive-properties/package.py
@@ -17,6 +17,7 @@ class RAssertiveProperties(RPackage):
cran = "assertive.properties"
+ version('0.0-5', sha256='b68954f53082561f0242682611bf3373e0bf30d8ac2256d82474edc5f992f4dd')
version('0.0-4', sha256='5c0663fecb4b7c30f2e1d65da8644534fcfe97fb3d8b51f74c1327cd14291a6b')
depends_on('r@3.0.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-bayesplot/package.py b/var/spack/repos/builtin/packages/r-bayesplot/package.py
index 1aef4ce2d3..c403d742b4 100644
--- a/var/spack/repos/builtin/packages/r-bayesplot/package.py
+++ b/var/spack/repos/builtin/packages/r-bayesplot/package.py
@@ -20,6 +20,7 @@ class RBayesplot(RPackage):
cran = "bayesplot"
+ version('1.9.0', sha256='0a81a4b99cf781334e57cfc3c469fad8b932a68204016a3bbca33cab4e2a1e43')
version('1.8.1', sha256='d8d74201ea91fa5438714686ca22a947ec9375b6c12b0cfef010c57104b1aa2a')
version('1.8.0', sha256='a605f9929e681593a3ef3ca9c836e713314994aaea00f359f71cfc42d151c948')
@@ -28,7 +29,10 @@ class RBayesplot(RPackage):
depends_on('r-ggplot2@3.0.0:', type=('build', 'run'))
depends_on('r-ggridges', type=('build', 'run'))
depends_on('r-glue', type=('build', 'run'))
+ depends_on('r-posterior', type=('build', 'run'), when='@1.9.0:')
depends_on('r-reshape2', type=('build', 'run'))
depends_on('r-rlang@0.3.0:', type=('build', 'run'))
depends_on('r-tibble', type=('build', 'run'))
+ depends_on('r-tibble@2.0.0:', type=('build', 'run'), when='@1.9.0:')
depends_on('r-tidyselect', type=('build', 'run'))
+ depends_on('pandoc@1.12.3:', when='@1.9.0:')
diff --git a/var/spack/repos/builtin/packages/r-bbmisc/package.py b/var/spack/repos/builtin/packages/r-bbmisc/package.py
index 4f95c6ac58..24aacc6de4 100644
--- a/var/spack/repos/builtin/packages/r-bbmisc/package.py
+++ b/var/spack/repos/builtin/packages/r-bbmisc/package.py
@@ -14,6 +14,8 @@ class RBbmisc(RPackage):
cran = "BBmisc"
+ version('1.12', sha256='900a633f69b7d9b13d58709eeae2fca2c1bc510765d778623a2af32cc870053e')
version('1.11', sha256='1ea48c281825349d8642a661bb447e23bfd651db3599bf72593bfebe17b101d2')
depends_on('r-checkmate@1.8.0:', type=('build', 'run'))
+ depends_on('r-data-table', type=('build', 'run'), when='@1.12:')
diff --git a/var/spack/repos/builtin/packages/r-beanplot/package.py b/var/spack/repos/builtin/packages/r-beanplot/package.py
index b2da347f09..23b8d701b2 100644
--- a/var/spack/repos/builtin/packages/r-beanplot/package.py
+++ b/var/spack/repos/builtin/packages/r-beanplot/package.py
@@ -14,4 +14,5 @@ class RBeanplot(RPackage):
cran = "beanplot"
+ version('1.3.1', sha256='49158aee3449108fd857ef43fb777f55a2b975b350a4a710788996ad19dd15ad')
version('1.2', sha256='49da299139a47171c5b4ccdea79ffbbc152894e05d552e676f135147c0c9b372')
diff --git a/var/spack/repos/builtin/packages/r-bglr/package.py b/var/spack/repos/builtin/packages/r-bglr/package.py
index ba892929a6..9a4072ba22 100644
--- a/var/spack/repos/builtin/packages/r-bglr/package.py
+++ b/var/spack/repos/builtin/packages/r-bglr/package.py
@@ -11,6 +11,7 @@ class RBglr(RPackage):
cran = "BGLR"
+ version('1.1.0', sha256='97c5bb8a461eb408e907693811b2d917efc993000da06591a83a3f5529451ea7')
version('1.0.9', sha256='440a96f9f502e0d6ecc8c00720d1ccdbab5ee8223e1def6c930edaa9a9de9099')
version('1.0.8', sha256='5e969590d80b2f272c02a43b487ab1ffa13af386e0342993e6ac484fc82c9b95')
diff --git a/var/spack/repos/builtin/packages/r-bigalgebra/package.py b/var/spack/repos/builtin/packages/r-bigalgebra/package.py
index d88f9ac219..c05da5488d 100644
--- a/var/spack/repos/builtin/packages/r-bigalgebra/package.py
+++ b/var/spack/repos/builtin/packages/r-bigalgebra/package.py
@@ -20,6 +20,7 @@ class RBigalgebra(RPackage):
cran = "bigalgebra"
+ version('1.1.0', sha256='e51530287a64826a3dfb55f41594bc8123b7b4c9b2074f6c8de218fa8b525734')
version('1.0.1', sha256='ff7e261d0aa0e0f498e926d923ac62fc5cb783fa1f74bb2ff76a09167388a9d2')
version('1.0.0', sha256='f186b603bd660be0cc5b7a52c943e23e92fef264f0bc96a8858e38df6cfc4085')
version('0.8.4.2', sha256='29962468cbfa6416f8628563d5ed8c9f76089190311ff1c618f099ee8d9eea75')
diff --git a/var/spack/repos/builtin/packages/r-bigmemory/package.py b/var/spack/repos/builtin/packages/r-bigmemory/package.py
index c0dd9af947..15f1285949 100644
--- a/var/spack/repos/builtin/packages/r-bigmemory/package.py
+++ b/var/spack/repos/builtin/packages/r-bigmemory/package.py
@@ -16,9 +16,11 @@ class RBigmemory(RPackage):
cran = "bigmemory"
+ version('4.6.1', sha256='b56e157c87ed6c4fc69d4cb9c697ae9a2001726e776e41aa7c48b35327b65141')
version('4.5.36', sha256='18c67fbe6344b2f8223456c4f19ceebcf6c1166255eab81311001fd67a45ef0e')
depends_on('r@3.2.0:', type=('build', 'run'))
- depends_on('r-bh', type=('build', 'run'))
- depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-bigmemory-sri', type=('build', 'run'))
+ depends_on('r-rcpp', type=('build', 'run'))
+ depends_on('r-uuid@1.0-2:', type=('build', 'run'), when='@4.6.1:')
+ depends_on('r-bh', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-bio3d/package.py b/var/spack/repos/builtin/packages/r-bio3d/package.py
index 3775ad0c9b..3957c3ebcc 100644
--- a/var/spack/repos/builtin/packages/r-bio3d/package.py
+++ b/var/spack/repos/builtin/packages/r-bio3d/package.py
@@ -24,6 +24,7 @@ class RBio3d(RPackage):
cran = "bio3d"
+ version('2.4-3', sha256='c6031f0d9033260a938171d0fa70720962e352935eb7bd2ddb9b92b93abe6a74')
version('2.4-2', sha256='91415766cda0f96557e6bc568dbce8d44254a9460f2e2d0beed0ce14ffad6ccb')
version('2.4-1', sha256='679fbd87fe9fb82a65427d281d3b68906509e411270cd87d2deb95d404333c1f')
version('2.3-4', sha256='f9b39ab242cbedafcd98c1732cb1f5c0dd9ef66e28be39695e3420dd93e2bafe')
diff --git a/var/spack/repos/builtin/packages/r-biocmanager/package.py b/var/spack/repos/builtin/packages/r-biocmanager/package.py
index d5d17cc016..f8e9685614 100644
--- a/var/spack/repos/builtin/packages/r-biocmanager/package.py
+++ b/var/spack/repos/builtin/packages/r-biocmanager/package.py
@@ -13,5 +13,6 @@ class RBiocmanager(RPackage):
cran = "BiocManager"
+ version('1.30.18', sha256='f763126b45614e1b83260da5311923eac50db24002f3c22fa5f667434a5b5c35')
version('1.30.16', sha256='75a754a55192ef6aa6ac9b054fd5381ff03fe6bb8b2e033eb8143da930ef3855')
version('1.30.10', sha256='f3b7a412b42be0ab8df5fcd9bf981876ba9e5c55bc5faaca7af7ede3b6d0c90e')
diff --git a/var/spack/repos/builtin/packages/r-biomartr/package.py b/var/spack/repos/builtin/packages/r-biomartr/package.py
index 528e00df00..d2a086f084 100644
--- a/var/spack/repos/builtin/packages/r-biomartr/package.py
+++ b/var/spack/repos/builtin/packages/r-biomartr/package.py
@@ -23,8 +23,10 @@ class RBiomartr(RPackage):
cran = "biomartr"
+ version('1.0.2', sha256='7fd6cccd915aa39e593fb7591107ab9792d98a119dd42f3f666e5184f4e42743')
version('0.9.2', sha256='d88085696e9c5614828602254c33f2cdd3bbfeebc2f21a705eee3cb961097c89')
+ depends_on('r@3.1.1:', type=('build', 'run'), when='@1.0.2:')
depends_on('r-biomart', type=('build', 'run'))
depends_on('r-biostrings', type=('build', 'run'))
depends_on('r-curl', type=('build', 'run'))
@@ -32,7 +34,8 @@ class RBiomartr(RPackage):
depends_on('r-jsonlite', type=('build', 'run'))
depends_on('r-data-table@1.9.4:', type=('build', 'run'))
depends_on('r-dplyr@0.3.0:', type=('build', 'run'))
- depends_on('r-readr@0.2.2:', type=('build', 'run'))
+ depends_on('r-readr@0.2.2:', type=('build', 'run'), when='@0.9.2:')
+ depends_on('r-readr@1.4.0:', type=('build', 'run'), when='@1.0.2:')
depends_on('r-downloader@0.3:', type=('build', 'run'))
depends_on('r-rcurl@1.95-4.5:', type=('build', 'run'))
depends_on('r-xml@3.98-1.1:', type=('build', 'run'))
@@ -41,4 +44,6 @@ class RBiomartr(RPackage):
depends_on('r-purrr', type=('build', 'run'))
depends_on('r-r-utils', type=('build', 'run'))
depends_on('r-philentropy', type=('build', 'run'))
- depends_on('r-fs@1.3.1:', type=('build', 'run'))
+ depends_on('r-withr', type=('build', 'run'), when='@1.0.2:')
+ depends_on('r-fs', type=('build', 'run'))
+ depends_on('r-fs@1.3.1:', type=('build', 'run'), when='@0.9.2')
diff --git a/var/spack/repos/builtin/packages/r-blavaan/package.py b/var/spack/repos/builtin/packages/r-blavaan/package.py
index 469264dbb0..1c84718296 100644
--- a/var/spack/repos/builtin/packages/r-blavaan/package.py
+++ b/var/spack/repos/builtin/packages/r-blavaan/package.py
@@ -16,6 +16,7 @@ References: Merkle & Rosseel (2018) <doi:10.18637/jss.v085.i04>; Merkle et al.
cran = "blavaan"
+ version('0.4-3', sha256='a9f9f7b32aab7e7f179340c9f0f9d154b5fac51352c4fd590d317c201fe81b74')
version('0.4-1', sha256='afb077d72f84ef0b6f45ef2ccb8335358042943c32a3472a9ca239ebca1c4aa4')
version('0.3-18', sha256='373960a22fc741c765e2ad2e0d99c1d4b2162f5f2a230ef314778ef8f433e865')
version('0.3-15', sha256='f73ead024bc3b65bdb0c5e5cd5458845158914eb579c07be2fd697a3573ebe6f')
@@ -25,7 +26,6 @@ References: Merkle & Rosseel (2018) <doi:10.18637/jss.v085.i04>; Merkle et al.
depends_on('r-lavaan@0.6-7:', type=('build', 'run'), when='@0.3-18:')
depends_on('r-lavaan@0.6-10:', type=('build', 'run'), when='@0.4-1:')
depends_on('r-rcpp@0.12.15:', type=('build', 'run'))
- depends_on('r-mcmcpack', type=('build', 'run'))
depends_on('r-coda', type=('build', 'run'))
depends_on('r-mnormt', type=('build', 'run'))
depends_on('r-nonnest2@0.5-5:', type=('build', 'run'))
@@ -42,3 +42,5 @@ References: Merkle & Rosseel (2018) <doi:10.18637/jss.v085.i04>; Merkle et al.
depends_on('r-bh@1.69.0:', type=('build', 'run'))
depends_on('r-rcppeigen@0.3.3.4.0:', type=('build', 'run'))
depends_on('gmake', type='build')
+
+ depends_on('r-mcmcpack', type=('build', 'run'), when='@:0.4-1')
diff --git a/var/spack/repos/builtin/packages/r-blob/package.py b/var/spack/repos/builtin/packages/r-blob/package.py
index af46d82047..bc1a16d500 100644
--- a/var/spack/repos/builtin/packages/r-blob/package.py
+++ b/var/spack/repos/builtin/packages/r-blob/package.py
@@ -16,6 +16,7 @@ class RBlob(RPackage):
cran = "blob"
+ version('1.2.3', sha256='2d88d683ee3d1b56b332b5c7769979b5d3994b5d9285ea634ec919576da3631b')
version('1.2.2', sha256='4976053c65994c769a4c22b4553bea0bd9c623b3b991dbaf023d2a164770c7fa')
version('1.2.1', sha256='ef54bc7a9646c1b73f4d2f60c869b4f1940bc3505874175114297ad7772d8bea')
version('1.2.0', sha256='1af1cfa28607bc0e2f1f01598a00a7d5d1385ef160a9e79e568f30f56538e023')
diff --git a/var/spack/repos/builtin/packages/r-bookdown/package.py b/var/spack/repos/builtin/packages/r-bookdown/package.py
index 0d04327f33..beb1c32fd2 100644
--- a/var/spack/repos/builtin/packages/r-bookdown/package.py
+++ b/var/spack/repos/builtin/packages/r-bookdown/package.py
@@ -14,6 +14,7 @@ class RBookdown(RPackage):
cran = "bookdown"
+ version('0.26', sha256='c6207288cb72ea7c555cbad449c61278e94b742cac1f610879fb3f2d60b2b185')
version('0.24', sha256='8bead2a20542d05f643fe77a949689a17b0ae9ff23efbb918ddab47597db1be3')
version('0.21', sha256='47c0fa7a65da83753c2f445e0e972913f9203460f1daae3ab255d0d4b30eba76')
version('0.12', sha256='38eb4c5b877ccd85b16cfe74a48c3bc53de2f276da98e5515f37e7a06e065bb0')
@@ -26,10 +27,12 @@ class RBookdown(RPackage):
depends_on('r-rmarkdown@1.12:', type=('build', 'run'))
depends_on('r-rmarkdown@2.4:', type=('build', 'run'), when='@0.21:')
depends_on('r-rmarkdown@2.9:', type=('build', 'run'), when='@0.24:')
+ depends_on('r-rmarkdown@2.13:', type=('build', 'run'), when='@0.26:')
depends_on('r-jquerylib', type=('build', 'run'), when='@0.24:')
depends_on('r-xfun@0.6:', type=('build', 'run'))
depends_on('r-xfun@0.13:', type=('build', 'run'), when='@0.21:')
depends_on('r-xfun@0.22:', type=('build', 'run'), when='@0.24:')
+ depends_on('r-xfun@0.29:', type=('build', 'run'), when='@0.26:')
depends_on('r-tinytex@0.12:', type=('build', 'run'), when='@0.12:')
depends_on('r-yaml@2.1.14:', type=('build', 'run'))
depends_on('r-yaml@2.1.19:', type=('build', 'run'), when='@0.21:')
diff --git a/var/spack/repos/builtin/packages/r-brew/package.py b/var/spack/repos/builtin/packages/r-brew/package.py
index 6728f4551f..a56d1c2e0c 100644
--- a/var/spack/repos/builtin/packages/r-brew/package.py
+++ b/var/spack/repos/builtin/packages/r-brew/package.py
@@ -15,4 +15,5 @@ class RBrew(RPackage):
cran = "brew"
+ version('1.0-7', sha256='38b859c1dca63479f6937c593da8f806f2b3279585bb6e20ecff1b898469e76e')
version('1.0-6', sha256='d70d1a9a01cf4a923b4f11e4374ffd887ad3ff964f35c6f9dc0f29c8d657f0ed')
diff --git a/var/spack/repos/builtin/packages/r-brms/package.py b/var/spack/repos/builtin/packages/r-brms/package.py
index bf34b12aea..0cbf72aa14 100644
--- a/var/spack/repos/builtin/packages/r-brms/package.py
+++ b/var/spack/repos/builtin/packages/r-brms/package.py
@@ -27,6 +27,7 @@ class RBrms(RPackage):
cran = "brms"
+ version('2.17.0', sha256='24e5a3a40b81bea558e8f660d0de7fd1a4c2080c7553baac98f34dd2682ece71')
version('2.16.3', sha256='68302b10b5264f72d163d01c17792c002306cf37f0ee778dcec4c7e118f923e1')
version('2.16.1', sha256='749efbd9fb061fe207cf2e729c1387d9a8538b922f12ceec4e82a9f8dd9c1bc4')
version('2.15.0', sha256='c11701d1d8758590b74bb845b568b736e4455a81b114c7dfde0b27b7bd1bcc2f')
diff --git a/var/spack/repos/builtin/packages/r-broom/package.py b/var/spack/repos/builtin/packages/r-broom/package.py
index a646b3aab6..27048d7771 100644
--- a/var/spack/repos/builtin/packages/r-broom/package.py
+++ b/var/spack/repos/builtin/packages/r-broom/package.py
@@ -20,6 +20,7 @@ class RBroom(RPackage):
cran = "broom"
+ version('0.8.0', sha256='66a1095d4430450dc810a5cea61cd7e7bee0e23739dcf5ddc5b57c9894fcf999')
version('0.7.12', sha256='04fac12b2546689603a474fb92a0572f4241ae87b51b21b0808814a489227bd9')
version('0.7.11', sha256='9e3999d2635ac72e8f4c3a81decd50ee5d464c001c155375b5a970a629ba2e19')
version('0.7.10', sha256='129fd5a53abef7f42b7efac6c64ebd71269b136aa648846d640562357927464f')
diff --git a/var/spack/repos/builtin/packages/r-c50/package.py b/var/spack/repos/builtin/packages/r-c50/package.py
index 1886f223fb..0fd1a67f5f 100644
--- a/var/spack/repos/builtin/packages/r-c50/package.py
+++ b/var/spack/repos/builtin/packages/r-c50/package.py
@@ -15,6 +15,7 @@ class RC50(RPackage):
cran = "C50"
+ version('0.1.6', sha256='cc20c0e2656287e6ca76ea341a703c816798b212ea4658f249ec047dbbf18cb4')
version('0.1.5', sha256='f0c17b4830371832ca64f5fcc702351a394ee90b384e0865307de9447f3f16d7')
version('0.1.3.1', sha256='0b151ba8deef50ab2e2ad8469d87f54f0c6ab862f5c790ed8bb16cb3b8027546')
version('0.1.2', sha256='8f459856e0309274bee24462b7145db4eba1d71031c236db39000a5375bdfaba')
diff --git a/var/spack/repos/builtin/packages/r-cairo/package.py b/var/spack/repos/builtin/packages/r-cairo/package.py
index 08c54f6229..3246fca17d 100644
--- a/var/spack/repos/builtin/packages/r-cairo/package.py
+++ b/var/spack/repos/builtin/packages/r-cairo/package.py
@@ -25,6 +25,7 @@ class RCairo(RPackage):
cran = "Cairo"
+ version('1.5-15', sha256='bb3ab1ff6431c15eb01a66ddf90695cd9a2af3d5a384753f5180cd0401d2e89d')
version('1.5-14', sha256='067751face3b5771e72f9fb49bfeefb3a7bbecc060b672ab4393cb5935204c7b')
version('1.5-12.2', sha256='dd524105c83b82b5c3b3ee2583ef90d4cafa54b0c29817dac48b425b79f90f92')
version('1.5-10', sha256='7837f0c384cd49bb3342cb39a916d7a80b02fffbf123913a58014e597f69b5d5')
@@ -33,4 +34,3 @@ class RCairo(RPackage):
depends_on('r+X', type=('build', 'run'))
depends_on('r@2.4.0:', type=('build', 'run'))
depends_on('cairo@1.2:')
- depends_on('libxt')
diff --git a/var/spack/repos/builtin/packages/r-car/package.py b/var/spack/repos/builtin/packages/r-car/package.py
index 095531690b..1b667314f3 100644
--- a/var/spack/repos/builtin/packages/r-car/package.py
+++ b/var/spack/repos/builtin/packages/r-car/package.py
@@ -14,6 +14,7 @@ class RCar(RPackage):
cran = "car"
+ version('3.0-13', sha256='d35ae8da80284c9e4471ff13e7100c3cdc1809fd06f813cd223a3958e29e47eb')
version('3.0-12', sha256='b899a6efae3842a90a2349d381dbcf4b4ed36bd03108ebe7380e81120e457302')
version('3.0-11', sha256='b32c927206f515631ff276dbb337b0f22e9b2d851f4abb1d2c272e534c19542c')
version('3.0-10', sha256='1ce316d2fee9b47c951d25d096be732489a3c9f6fc9e612a1eca2e50fb5925f1')
@@ -33,6 +34,6 @@ class RCar(RPackage):
depends_on('r-quantreg', type=('build', 'run'))
depends_on('r-maptools', type=('build', 'run'), when='@3.0:')
depends_on('r-rio', type=('build', 'run'), when='@3.0:3.0-11')
- depends_on('r-lme4@1.1-27.1:', type=('build', 'run'), when='@3.0-11:')
depends_on('r-lme4', type=('build', 'run'), when='@3.0:')
+ depends_on('r-lme4@1.1-27.1:', type=('build', 'run'), when='@3.0-11:')
depends_on('r-nlme', type=('build', 'run'), when='@3.0:')
diff --git a/var/spack/repos/builtin/packages/r-caracas/package.py b/var/spack/repos/builtin/packages/r-caracas/package.py
index ea83b3c310..63d6e5762a 100644
--- a/var/spack/repos/builtin/packages/r-caracas/package.py
+++ b/var/spack/repos/builtin/packages/r-caracas/package.py
@@ -15,6 +15,7 @@ class RCaracas(RPackage):
cran = "caracas"
+ version('1.1.2', sha256='9c726c77508617e74d1a11ac6e276973df42e1ad81145db455cc6e420526c757')
version('1.1.1', sha256='e14487c9492417cf5c7d7373c37dbb4fea4d91180a1a03154e51eaa7878b2769')
version('1.0.1', sha256='2482dd7b77791243b8174cb41b80b735c3ebd7db837bbf991127514f492af594')
version('1.0.0', sha256='0da6f1d94d1dacb1c11a3635bdff8f7cd8f84373deffa7126636d0876d48e42b')
diff --git a/var/spack/repos/builtin/packages/r-caret/package.py b/var/spack/repos/builtin/packages/r-caret/package.py
index 31b4f12b31..045eb64136 100644
--- a/var/spack/repos/builtin/packages/r-caret/package.py
+++ b/var/spack/repos/builtin/packages/r-caret/package.py
@@ -14,6 +14,7 @@ class RCaret(RPackage):
cran = "caret"
+ version('6.0-92', sha256='1d814a2a921a23ad8b9a7da6f788e6abc06f5668b3918bd440d4355bc4b81511')
version('6.0-90', sha256='e851a4ed7d939c665e57e3551a5464b09fe4285e7c951236efdd890b0da866bc')
version('6.0-86', sha256='da4a1c7c3fbf645c5b02871e563a77404622b83623f0d1c5dc1425de7aa4ce37')
version('6.0-84', sha256='a1831c086a9c71b469f7405649ba04517683cdf229e119c005189cf57244090d')
diff --git a/var/spack/repos/builtin/packages/r-caroline/package.py b/var/spack/repos/builtin/packages/r-caroline/package.py
index e6c0c192fb..4fca021ec7 100644
--- a/var/spack/repos/builtin/packages/r-caroline/package.py
+++ b/var/spack/repos/builtin/packages/r-caroline/package.py
@@ -22,6 +22,7 @@ class RCaroline(RPackage):
cran = "caroline"
+ version('0.8.0', sha256='58f464711f7279ca2aa173e6ce29d3308e01db37dccefbbf14cd7720c0231976')
version('0.7.6', sha256='e7ba948f7d87f091b498dd0eec2ca4fdad7af4e2bbb67e0945c2f0d3f2eadda9')
depends_on('r@1.8.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-ccp/package.py b/var/spack/repos/builtin/packages/r-ccp/package.py
index 42e2531536..fec52cc3af 100644
--- a/var/spack/repos/builtin/packages/r-ccp/package.py
+++ b/var/spack/repos/builtin/packages/r-ccp/package.py
@@ -15,4 +15,5 @@ class RCcp(RPackage):
cran = 'CCP'
+ version('1.2', sha256='7e3906abf51f4c7046730760800711b915f52855fbb2bfd33eca8fa75e70f618')
version('1.1', sha256='9d21cda05221f1a458fe2938cd5ff0e89711ef058865d25f9894a275c7805d1e')
diff --git a/var/spack/repos/builtin/packages/r-checkmate/package.py b/var/spack/repos/builtin/packages/r-checkmate/package.py
index d35d7c7633..55f2ecdd53 100644
--- a/var/spack/repos/builtin/packages/r-checkmate/package.py
+++ b/var/spack/repos/builtin/packages/r-checkmate/package.py
@@ -15,6 +15,7 @@ class RCheckmate(RPackage):
cran = "checkmate"
+ version('2.1.0', sha256='b784dd5163a0350d084ef34882d9781373839dedeaa9a8b8e6187d773d0d21c6')
version('2.0.0', sha256='0dc25b0e20c04836359df1885d099c6e4ad8ae0e585a9e4107f7ea945d9c6fa4')
version('1.9.4', sha256='faa25754b757fe483b876f5d07b73f76f69a1baa971420892fadec4af4bbad21')
version('1.8.4', sha256='6f948883e5a885a1c409d997f0c782e754a549227ec3c8eb18318deceb38f8f6')
diff --git a/var/spack/repos/builtin/packages/r-chron/package.py b/var/spack/repos/builtin/packages/r-chron/package.py
index 0c78ce8c2f..d3ff798ac0 100644
--- a/var/spack/repos/builtin/packages/r-chron/package.py
+++ b/var/spack/repos/builtin/packages/r-chron/package.py
@@ -13,6 +13,7 @@ class RChron(RPackage):
cran = "chron"
+ version('2.3-57', sha256='9645d86a84d1afc12a0accf4f826fdd40e6d050a313424ad70f8085e8f19c232')
version('2.3-56', sha256='863ecbb951a3da994761ea9062fa96d34e94e19fbc4122521ac179274dfa3f5d')
version('2.3-53', sha256='521814b46ba958eae28e29d8766aebd285da5e6fa16c5806603df3ae39f77309')
version('2.3-52', sha256='c47fcf4abb635babe6337604c876d4853d8a24639a98b71523746c56ce75b4a0')
diff --git a/var/spack/repos/builtin/packages/r-circlize/package.py b/var/spack/repos/builtin/packages/r-circlize/package.py
index 187dad174b..7205794461 100644
--- a/var/spack/repos/builtin/packages/r-circlize/package.py
+++ b/var/spack/repos/builtin/packages/r-circlize/package.py
@@ -23,6 +23,7 @@ class RCirclize(RPackage):
cran = "circlize"
+ version('0.4.15', sha256='d602d55313fe7c675109153d6ed3b99bdba5292e1deefed71d5a21e0db595cc7')
version('0.4.13', sha256='6cbadbf8e8b1abbd71a79080677d2b95f2bdd18f2e4d707c32d5c2ff26c5369b')
version('0.4.12', sha256='b3b60caa5292cf980cf474c85f59582f6862925631a4da86a78eac05903252f4')
version('0.4.6', sha256='cec88cfc5e512a111cc37177552c25698ccc0e9bbecb0d6e60657e7b115a56fa')
diff --git a/var/spack/repos/builtin/packages/r-cli/package.py b/var/spack/repos/builtin/packages/r-cli/package.py
index a7bead40c1..5e5a1717d2 100644
--- a/var/spack/repos/builtin/packages/r-cli/package.py
+++ b/var/spack/repos/builtin/packages/r-cli/package.py
@@ -18,6 +18,7 @@ class RCli(RPackage):
cran = "cli"
+ version('3.3.0', sha256='c3a9ebbcb9017fb9aeda4f7df5ca981e42b169cbd7ce13e592cda2cd74250d63')
version('3.2.0', sha256='cd5a1b754d09de33f088f25ecdb0494100f9a42bc0a66622bfd7d8ec5498e862')
version('3.1.1', sha256='c8b3e6014ad60593ba21897255acfe90c0e3f98bd4f7e22c1f3acb2644cf54cf')
version('3.1.0', sha256='c70a61830bf706a84c59eb74a809978846cee93742198ab4192742a5df1ace11')
@@ -29,7 +30,9 @@ class RCli(RPackage):
version('1.0.0', sha256='8fa3dbfc954ca61b8510f767ede9e8a365dac2ef95fe87c715a0f37d721b5a1d')
depends_on('r@2.10:', type=('build', 'run'))
+ depends_on('r@3,4:', type=('build', 'run'), when='@3.3.0:')
depends_on('r-glue', type=('build', 'run'), when='@2:')
+ depends_on('r-glue@1.6.0:', type=('build', 'run'), when='@3.3.0:')
depends_on('r-assertthat', type=('build', 'run'), when='@:2.3')
depends_on('r-crayon@1.3.4:', type=('build', 'run'), when='@:2.2')
diff --git a/var/spack/repos/builtin/packages/r-clipr/package.py b/var/spack/repos/builtin/packages/r-clipr/package.py
index 53a3e4af58..26123d582c 100644
--- a/var/spack/repos/builtin/packages/r-clipr/package.py
+++ b/var/spack/repos/builtin/packages/r-clipr/package.py
@@ -14,6 +14,7 @@ class RClipr(RPackage):
cran = "clipr"
+ version('0.8.0', sha256='32c2931992fbec9c31b71de3e27059f1cbb45b4b1f45fd42e0e8dbcec6de3be9')
version('0.7.1', sha256='ffad477b07847e3b68f7e4406bbd323025a8dae7e3c768943d4d307ee3248afb')
version('0.7.0', sha256='03a4e4b72ec63bd08b53fe62673ffc19a004cc846957a335be2b30d046b8c2e2')
version('0.5.0', sha256='fd303f8b7f29badcdf490bb2d579acdfc4f4e1aa9c90ac77ab9d05ce3d053dbf')
diff --git a/var/spack/repos/builtin/packages/r-clue/package.py b/var/spack/repos/builtin/packages/r-clue/package.py
index 1d143768cc..3829eb9ad6 100644
--- a/var/spack/repos/builtin/packages/r-clue/package.py
+++ b/var/spack/repos/builtin/packages/r-clue/package.py
@@ -11,6 +11,7 @@ class RClue(RPackage):
cran = "clue"
+ version('0.3-61', sha256='71311b16ce380fd9a8834be95b55b3d1b47e4ee2b8acb35b8d481138c314dc31')
version('0.3-60', sha256='6d21ddfd0d621ed3bac861890c600884b6ed5ff7d2a36c9778b892636dbbef2a')
version('0.3-58', sha256='2ab6662eaa1103a7b633477e8ebd266b262ed54fac6f9326b160067a2ded9ce7')
version('0.3-57', sha256='6e369d07b464a9624209a06b5078bf988f01f7963076e946649d76aea0622d17')
diff --git a/var/spack/repos/builtin/packages/r-cluster/package.py b/var/spack/repos/builtin/packages/r-cluster/package.py
index e6ff553821..205ae7e288 100644
--- a/var/spack/repos/builtin/packages/r-cluster/package.py
+++ b/var/spack/repos/builtin/packages/r-cluster/package.py
@@ -15,6 +15,7 @@ class RCluster(RPackage):
cran = "cluster"
+ version('2.1.3', sha256='a3ad7a9455d634c4e0c6ccf8ea7a3a392a0ecf9c2bdb368d127ffa68a93164a9')
version('2.1.2', sha256='5c8aa760fb6dda4fcfe6196e561ffcd2dc12b1a6c7659cb90be2cde747311499')
version('2.1.0', sha256='eaf955bef8f616ea563351ec7f597c445aec43e65991ca975e382ef1fd70aa14')
version('2.0.7-1', sha256='b10141090cf3c2b62260611a0ea822eb2f7bab9f4fd656c48bdc12b65c5c3dbf')
@@ -25,3 +26,4 @@ class RCluster(RPackage):
depends_on('r@3.2.0:', type=('build', 'run'), when='@2.0.7:')
depends_on('r@3.3.0:', type=('build', 'run'), when='@2.0.8:')
depends_on('r@3.4.0:', type=('build', 'run'), when='@2.1.2:')
+ depends_on('r@3.5.0:', type=('build', 'run'), when='@2.1.3:')
diff --git a/var/spack/repos/builtin/packages/r-colorspace/package.py b/var/spack/repos/builtin/packages/r-colorspace/package.py
index 81ec52fb40..5ce7598131 100644
--- a/var/spack/repos/builtin/packages/r-colorspace/package.py
+++ b/var/spack/repos/builtin/packages/r-colorspace/package.py
@@ -27,6 +27,7 @@ class RColorspace(RPackage):
cran = "colorspace"
+ version('2.0-3', sha256='e75681cc4dd6e4b70303fd96a6d4597065dc6bffcaa4ae4244b73ff19016857f')
version('2.0-2', sha256='b891cd2ec129ed5f116429345947bcaadc33969758a108521eb0cf36bd12183a')
version('2.0-0', sha256='4e6a53af9918db282cefdc71eaa30f507d4d1d682bcfb74cb0dd68a0b282018e')
version('1.4-1', sha256='693d713a050f8bfecdb7322739f04b40d99b55aed168803686e43401d5f0d673')
diff --git a/var/spack/repos/builtin/packages/r-commonmark/package.py b/var/spack/repos/builtin/packages/r-commonmark/package.py
index e0b6d9a9e1..dabd0f57c1 100644
--- a/var/spack/repos/builtin/packages/r-commonmark/package.py
+++ b/var/spack/repos/builtin/packages/r-commonmark/package.py
@@ -18,4 +18,5 @@ class RCommonmark(RPackage):
cran = "commonmark"
+ version('1.8.0', sha256='7d07e72937b1cf158e69f183722bf79dbb91b8967a9dd29f4fa145500c2be668')
version('1.7', sha256='d14a767a3ea9778d6165f44f980dd257423ca6043926e3cd8f664f7171f89108')
diff --git a/var/spack/repos/builtin/packages/r-conquer/package.py b/var/spack/repos/builtin/packages/r-conquer/package.py
index d46abbbb1f..8093b50db9 100644
--- a/var/spack/repos/builtin/packages/r-conquer/package.py
+++ b/var/spack/repos/builtin/packages/r-conquer/package.py
@@ -16,6 +16,7 @@ class RConquer(RPackage):
cran = "conquer"
+ version('1.3.0', sha256='ac354e18c9ad6f41ed5200fad1c99fa5b124fc6fa5bba8f3434be2478f53d5fa')
version('1.2.1', sha256='1354f90f962a2124e155227cdc0ed2c6e54682f1e08934c49a827e51dc112f45')
version('1.0.2', sha256='542f6154ce1ffec0c1b4dd4e1f5b86545015f4b378c4c66a0840c65c57d674ff')
@@ -23,5 +24,6 @@ class RConquer(RPackage):
depends_on('r-rcpp@1.0.3:', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-matrixstats', type=('build', 'run'))
- depends_on('r-caret', type=('build', 'run'), when='@1.2:')
depends_on('r-rcpparmadillo@0.9.850.1.0:', type=('build', 'run'))
+
+ depends_on('r-caret', type=('build', 'run'), when='@1.2.1')
diff --git a/var/spack/repos/builtin/packages/r-countrycode/package.py b/var/spack/repos/builtin/packages/r-countrycode/package.py
index 7edded4ebe..9744c05a36 100644
--- a/var/spack/repos/builtin/packages/r-countrycode/package.py
+++ b/var/spack/repos/builtin/packages/r-countrycode/package.py
@@ -14,6 +14,7 @@ class RCountrycode(RPackage):
cran = "countrycode"
+ version('1.4.0', sha256='99dfe7652c1e631b9e0f8fac0b0163e7a3fdde8476498555d553e0d1c5fdccc4')
version('1.3.0', sha256='34361416e771ece1d56dc56f79416c8b7f9591885773becae270684d095bc70f')
version('1.2.0', sha256='32c65702dcc33d512ff99f14c12f4e0c48fe7ed7c8aa2f0a64194576d129dd40')
diff --git a/var/spack/repos/builtin/packages/r-crayon/package.py b/var/spack/repos/builtin/packages/r-crayon/package.py
index c6b7ce3a10..8d418ce238 100644
--- a/var/spack/repos/builtin/packages/r-crayon/package.py
+++ b/var/spack/repos/builtin/packages/r-crayon/package.py
@@ -17,6 +17,7 @@ class RCrayon(RPackage):
cran = "crayon"
+ version('1.5.1', sha256='c025c73b78a8e88e8e4363c8e1a941da5089a7baea39e59ea5342ab9ebe45df9')
version('1.4.2', sha256='ee34397f643e76e30588068d4c93bd3c9afd2193deacccacb3bffcadf141b857')
version('1.4.1', sha256='08b6e42e748d096960b2f32b7ffe690c25742e29fe14c19d1834cd6ff43029c7')
version('1.3.4', sha256='fc6e9bf990e9532c4fcf1a3d2ce22d8cf12d25a95e4779adfa17713ed836fa68')
diff --git a/var/spack/repos/builtin/packages/r-cubature/package.py b/var/spack/repos/builtin/packages/r-cubature/package.py
index aa1db67710..fa6b0c523f 100644
--- a/var/spack/repos/builtin/packages/r-cubature/package.py
+++ b/var/spack/repos/builtin/packages/r-cubature/package.py
@@ -18,6 +18,7 @@ class RCubature(RPackage):
cran = "cubature"
+ version('2.0.4.4', sha256='087b3b2c4f25d873fa95e9d38766a17a7201d03a6f4960f1e080a8db8b67d569')
version('2.0.4.2', sha256='605bdd9d90fb6645359cccd1b289c5afae235b46360ef5bdd2001aa307a7694e')
version('2.0.4.1', sha256='383fbdf49d1cdf760ad5d88d353e69118c7c663cde126c5bdd33b6fecc50d400')
version('2.0.3', sha256='79bf03ebdb64b0de1ef19d24051b9d922df9310254bee459bb47764522407a73')
diff --git a/var/spack/repos/builtin/packages/r-cubist/package.py b/var/spack/repos/builtin/packages/r-cubist/package.py
index d717860035..0d9e9e5ae9 100644
--- a/var/spack/repos/builtin/packages/r-cubist/package.py
+++ b/var/spack/repos/builtin/packages/r-cubist/package.py
@@ -13,6 +13,7 @@ class RCubist(RPackage):
cran = "Cubist"
+ version('0.4.0', sha256='3a1f74d44300e3a38a10e3693fc019cfcca221d62d7c416abebb20811e965578')
version('0.3.0', sha256='88a76e7f858a8e978a73a97ce6a3504201d889517b39ce862cef734dcf9eb263')
version('0.2.3', sha256='19845f585e073f316bb4bdf74b28a624e839561faeedd40ef5548960c5b1e1f4')
version('0.2.2', sha256='cd3e152cc72ab33f720a8fb6b8b6787171e1c037cfda48f1735ab692ed6d85d4')
diff --git a/var/spack/repos/builtin/packages/r-dada2/package.py b/var/spack/repos/builtin/packages/r-dada2/package.py
index 7f1667015e..06c94d4904 100644
--- a/var/spack/repos/builtin/packages/r-dada2/package.py
+++ b/var/spack/repos/builtin/packages/r-dada2/package.py
@@ -13,6 +13,7 @@ class RDada2(RPackage):
homepage = "https://benjjneb.github.io/dada2/"
url = "https://github.com/benjjneb/dada2/archive/v1.14.tar.gz"
+ version('1.20', sha256='351b80dc5cdd587f5d4fe2541574e3d0cf7966342ee913b47cb20c7eb150e3f5')
version('1.14', sha256='19980b9d7b0a0e80e86010357cae11d1fc07c2d02067c4445169143cf1f99906')
depends_on('r@3.4:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-deoptimr/package.py b/var/spack/repos/builtin/packages/r-deoptimr/package.py
index 97e87a15bc..77d1dbb727 100644
--- a/var/spack/repos/builtin/packages/r-deoptimr/package.py
+++ b/var/spack/repos/builtin/packages/r-deoptimr/package.py
@@ -19,5 +19,6 @@ class RDeoptimr(RPackage):
cran = "DEoptimR"
+ version('1.0-11', sha256='1874b30f4b75f9bfa891986598f1ebe1fce27fdced14f8f417d3535cac08165b')
version('1.0-10', sha256='774f7ba0ac9c73aaab4567024b98afdb58098905726e72bceeeb9e380e782ad5')
version('1.0-8', sha256='846911c1b2561a9fae73a8c60a21a5680963ebb0050af3c1f1147ae9a121e5ef')
diff --git a/var/spack/repos/builtin/packages/r-desc/package.py b/var/spack/repos/builtin/packages/r-desc/package.py
index 53c1d918d4..f848ebeaa3 100644
--- a/var/spack/repos/builtin/packages/r-desc/package.py
+++ b/var/spack/repos/builtin/packages/r-desc/package.py
@@ -14,12 +14,15 @@ class RDesc(RPackage):
cran = "desc"
+ version('1.4.1', sha256='8f9ebb51eccf925b2e76bc65ecf495e8f3882b8c0053023f396622f0402d6f54')
version('1.4.0', sha256='8220e4c706449b8121b822e70b1414f391ef419aed574836a234c63b83e5d649')
version('1.2.0', sha256='e66fb5d4fc7974bc558abcdc107a1f258c9177a29dcfcf9164bc6b33dd08dae8')
depends_on('r@3.1.0:', type=('build', 'run'))
+ depends_on('r@3.4:', type=('build', 'run'), when='@1.4.1:')
+ depends_on('r-cli', type=('build', 'run'), when='@1.4.1:')
depends_on('r-r6', type=('build', 'run'))
- depends_on('r-crayon', type=('build', 'run'))
depends_on('r-rprojroot', type=('build', 'run'))
depends_on('r-assertthat', type=('build', 'run'), when='@:1.2')
+ depends_on('r-crayon', type=('build', 'run'), when='@:1.4.0')
diff --git a/var/spack/repos/builtin/packages/r-desolve/package.py b/var/spack/repos/builtin/packages/r-desolve/package.py
index 00426d68e7..adf57c035c 100644
--- a/var/spack/repos/builtin/packages/r-desolve/package.py
+++ b/var/spack/repos/builtin/packages/r-desolve/package.py
@@ -23,6 +23,7 @@ class RDesolve(RPackage):
cran = "deSolve"
+ version('1.32', sha256='74670f16eaafddd044a3ac1813acd5d164aed3f862b87aa1ac275b600e27d9ad')
version('1.30', sha256='39f65d7af6b4d85eb023cce2a200c2de470644b22d45e210c5b7d558c3abf548')
version('1.28', sha256='4c55ef4cae841df91034382d277b483985af120240f87af587ff82177fdb5a49')
version('1.24', sha256='3aa52c822abb0348a904d5bbe738fcea2b2ba858caab9f2831125d07f0d57b42')
@@ -31,3 +32,4 @@ class RDesolve(RPackage):
depends_on('r@2.15.0:', type=('build', 'run'))
depends_on('r@3.3.0:', type=('build', 'run'), when='@1.28:')
+ depends_on('r@4.0.0:', type=('build', 'run'), when='@1.32:')
diff --git a/var/spack/repos/builtin/packages/r-diagrammer/package.py b/var/spack/repos/builtin/packages/r-diagrammer/package.py
index c67d442258..72226e9409 100644
--- a/var/spack/repos/builtin/packages/r-diagrammer/package.py
+++ b/var/spack/repos/builtin/packages/r-diagrammer/package.py
@@ -18,6 +18,7 @@ class RDiagrammer(RPackage):
cran = "DiagrammeR"
+ version('1.0.9', sha256='64a426fe27110dddd8b0c1223ae4c397a2e553ae5e81ddd4ff67c026cfc40abf')
version('1.0.8', sha256='b9157b26215edda4fe0a1b9330a597d5b01a5d7e660a9832f593b87c584dd233')
version('1.0.7', sha256='6af291a7136657b9f7c67b96cd7f3afe99662cf5a477ebbb213a6c53df623050')
version('1.0.6.1', sha256='be4e4c520a3692902ce405e8225aef9f3d5f0cd11fcde614f6541e981b63673d')
diff --git a/var/spack/repos/builtin/packages/r-dichromat/package.py b/var/spack/repos/builtin/packages/r-dichromat/package.py
index be700d02ce..311caab1b1 100644
--- a/var/spack/repos/builtin/packages/r-dichromat/package.py
+++ b/var/spack/repos/builtin/packages/r-dichromat/package.py
@@ -14,6 +14,7 @@ class RDichromat(RPackage):
cran = "dichromat"
+ version('2.0-0.1', sha256='a10578e9ad8a581bd8fe0d8a8370051f3cdcf12c7d282f3af2a18dacda566081')
version('2.0-0', sha256='31151eaf36f70bdc1172da5ff5088ee51cc0a3db4ead59c7c38c25316d580dd1')
depends_on('r@2.10:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-domc/package.py b/var/spack/repos/builtin/packages/r-domc/package.py
index a1d18dc947..dc30deca61 100644
--- a/var/spack/repos/builtin/packages/r-domc/package.py
+++ b/var/spack/repos/builtin/packages/r-domc/package.py
@@ -14,6 +14,7 @@ class RDomc(RPackage):
cran = "doMC"
+ version('1.3.8', sha256='b2186f851448251ae6af5d14b9e3e7f9221f90887e5f8de6a68c91caf16619a3')
version('1.3.7', sha256='defab27adc298a6746896d83251f8355d62c01012d51ef96d491875a2e74b54d')
version('1.3.6', sha256='2977fc9e2dc54d85d45b4a36cd286dff72834fbc73f38b6ee45a6eb8557fc9b2')
version('1.3.4', sha256='76a1092fca59b441e6f89eb7e2fb3a12de807f736a217949c80339f20c958778')
diff --git a/var/spack/repos/builtin/packages/r-doparallel/package.py b/var/spack/repos/builtin/packages/r-doparallel/package.py
index 8853387558..b6ab1bb011 100644
--- a/var/spack/repos/builtin/packages/r-doparallel/package.py
+++ b/var/spack/repos/builtin/packages/r-doparallel/package.py
@@ -14,6 +14,7 @@ class RDoparallel(RPackage):
cran = "doParallel"
+ version('1.0.17', sha256='b96a25ad105a654d70c7b4ca27290dc9967bc47f4668b2763927a886b178abd7')
version('1.0.16', sha256='f1bb26f964f30d47ae4d6cf2b0a2ca0c2122d376424875e82d9abe9e7b054eb2')
version('1.0.15', sha256='71ad7ea69616468996aefdd8d02a4a234759a21ddde9ed1657e3c537145cd86e')
version('1.0.11', sha256='4ccbd2eb46d3e4f5251b0c3de4d93d9168b02bb0be493656d6aea236667ff76a')
diff --git a/var/spack/repos/builtin/packages/r-dosnow/package.py b/var/spack/repos/builtin/packages/r-dosnow/package.py
index 3e62dae875..6e7b1738ec 100644
--- a/var/spack/repos/builtin/packages/r-dosnow/package.py
+++ b/var/spack/repos/builtin/packages/r-dosnow/package.py
@@ -14,6 +14,7 @@ class RDosnow(RPackage):
cran = "doSNOW"
+ version('1.0.20', sha256='917cabed166aa2d1ec291691c17e1e3d344e858543e1682e3a442cc0c504bbb8')
version('1.0.19', sha256='4cd2d080628482f4c6ecab593313d7e42516f5ff13fbf9f90e461fcad0580738')
version('1.0.18', sha256='70e7bd82186e477e3d1610676d4c6a75258ac08f104ecf0dcc971550ca174766')
diff --git a/var/spack/repos/builtin/packages/r-dplyr/package.py b/var/spack/repos/builtin/packages/r-dplyr/package.py
index 25d61c125f..6cd671c2a7 100644
--- a/var/spack/repos/builtin/packages/r-dplyr/package.py
+++ b/var/spack/repos/builtin/packages/r-dplyr/package.py
@@ -14,6 +14,7 @@ class RDplyr(RPackage):
cran = "dplyr"
+ version('1.0.9', sha256='e2e1f7312618b4e32ada9a1da79cef32eaec12acd408c973a6b069c6be4fb46b')
version('1.0.7', sha256='d2fe3aedbce02fdddce09a8a80f85f5918a9d1f15f792ad4a98f254959d7123d')
version('1.0.3', sha256='28a1a9d87e99154d4d1542ef9da9fd70f869a173dc9709f4583a5770bae58441')
version('0.8.3', sha256='68b4aac65a69ea6390e90991d9c7ce7a011a07e5db439d60cce911a078424c0c')
@@ -31,22 +32,27 @@ class RDplyr(RPackage):
depends_on('r@3.1.2:', type=('build', 'run'))
depends_on('r@3.2.0:', type=('build', 'run'), when='@0.8.1:')
depends_on('r@3.3.0:', type=('build', 'run'), when='@1.0.3:')
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@1.0.9:')
depends_on('r-ellipsis', type=('build', 'run'), when='@1.0.3:')
depends_on('r-generics', type=('build', 'run'), when='@1.0.3:')
depends_on('r-glue@1.3.0:', type=('build', 'run'))
depends_on('r-glue@1.3.2:', type=('build', 'run'), when='@1.0.3:')
depends_on('r-lifecycle@0.2.0:', type=('build', 'run'), when='@1.0.3:')
depends_on('r-lifecycle@1.0.0:', type=('build', 'run'), when='@1.0.5:')
+ depends_on('r-lifecycle@1.0.1:', type=('build', 'run'), when='@1.0.9:')
depends_on('r-magrittr@1.5:', type=('build', 'run'))
depends_on('r-r6', type=('build', 'run'))
depends_on('r-rlang@0.4.0:', type=('build', 'run'))
depends_on('r-rlang@0.4.9:', type=('build', 'run'), when='@1.0.3:')
depends_on('r-rlang@0.4.10:', type=('build', 'run'), when='@1.0.5:')
+ depends_on('r-rlang@1.0.2:', type=('build', 'run'), when='@1.0.9:')
depends_on('r-tibble@2.0.0:', type=('build', 'run'))
depends_on('r-tibble@2.1.3:', type=('build', 'run'), when='@1.0.3:')
depends_on('r-tidyselect@0.2.5:', type=('build', 'run'))
depends_on('r-tidyselect@1.1.0:', type=('build', 'run'), when='@1.0.3:')
+ depends_on('r-tidyselect@1.1.1:', type=('build', 'run'), when='@1.0.9:')
depends_on('r-vctrs@0.3.5:', type=('build', 'run'), when='@1.0.3:')
+ depends_on('r-vctrs@0.4.1:', type=('build', 'run'), when='@1.0.9:')
depends_on('r-pillar@1.5.1:', type=('build', 'run'), when='@1.0.6:')
depends_on('r-assertthat@0.2.0:', type=('build', 'run'), when='@:0.8.3')
diff --git a/var/spack/repos/builtin/packages/r-dt/package.py b/var/spack/repos/builtin/packages/r-dt/package.py
index 7595c0f185..07f76f9175 100644
--- a/var/spack/repos/builtin/packages/r-dt/package.py
+++ b/var/spack/repos/builtin/packages/r-dt/package.py
@@ -16,6 +16,7 @@ class RDt(RPackage):
cran = "DT"
+ version('0.23', sha256='360ae2fcb1141125a1b16448570fc37d14c4dd3f78a872c26df4fda1787cdc70')
version('0.20', sha256='c66d7f49ec101fdbb91c6d26c06fb1373f9ebdefe29fe99f2ae1a641220aba9f')
version('0.17', sha256='e3430292421dcc2b6ad5f2deda729f0603da4eb31f86d071833e6e11abf3fb56')
version('0.13', sha256='79a073fe96980ce150d790ab76133c9e80bd463270c34d149c03934a622d63b5')
diff --git a/var/spack/repos/builtin/packages/r-ellipse/package.py b/var/spack/repos/builtin/packages/r-ellipse/package.py
index c27182d859..c0369d3bb5 100644
--- a/var/spack/repos/builtin/packages/r-ellipse/package.py
+++ b/var/spack/repos/builtin/packages/r-ellipse/package.py
@@ -18,6 +18,7 @@ class REllipse(RPackage):
cran = "ellipse"
+ version('0.4.3', sha256='02ef2b11c3462a8b800332e522183f4c7c40c7d2d66c5174d5f3f6d8cc68a946')
version('0.4.2', sha256='1719ce9a00b9ac4d56dbf961803085b892d3359726fda3567bb989ddfed9a5f2')
version('0.4.1', sha256='1a9a9c52195b26c2b4d51ad159ab98aff7aa8ca25fdc6b2198818d1a0adb023d')
version('0.3-8', sha256='508d474c142f0770c25763d6c8f8f8c9dcf8205afd42ffa22e6be1e0360e7f45')
diff --git a/var/spack/repos/builtin/packages/r-emmeans/package.py b/var/spack/repos/builtin/packages/r-emmeans/package.py
index c9cd071621..5bce450efb 100644
--- a/var/spack/repos/builtin/packages/r-emmeans/package.py
+++ b/var/spack/repos/builtin/packages/r-emmeans/package.py
@@ -19,6 +19,7 @@ class REmmeans(RPackage):
cran = "emmeans"
+ version('1.7.4-1', sha256='f7a33a2b54ad13d6e39ee6c58004f83a9edb06e8dc8282180440610eb18be721')
version('1.7.2', sha256='d3e51c2a4b6c74dd9840efebe241a53072172f269f4324421f28f68db71721bc')
version('1.7.1-1', sha256='6b01eaad1ea0f96245db8563cc77929a3c3b96cd61c24ce1d452308d6e0250de')
version('1.7.0', sha256='d4b654896197dfda8354b33257380a66ee06117d6177b1ed7f1e42176525e9c5')
diff --git a/var/spack/repos/builtin/packages/r-energy/package.py b/var/spack/repos/builtin/packages/r-energy/package.py
index 7ed05d6814..4b7b7ab4b2 100644
--- a/var/spack/repos/builtin/packages/r-energy/package.py
+++ b/var/spack/repos/builtin/packages/r-energy/package.py
@@ -21,6 +21,7 @@ class REnergy(RPackage):
cran = "energy"
+ version('1.7-10', sha256='543de4875c46cc90e711e71c45b082d962fbb5158a094f9f10d37d3f57e1bea7')
version('1.7-9', sha256='68d0e0ed99f5a8a03858603ed36010a2f67b87a947dbcc65a9da2e08a2d3bad9')
version('1.7-8', sha256='de08e8de037bb30068bbf0c1880b153a586d342304681f4ba103ab808c7f4789')
version('1.7-7', sha256='67b88fb33ee6e7bec2e4fe356a4efd36f70c3cf9b0ebe2f6d9da9ec96de9968f')
diff --git a/var/spack/repos/builtin/packages/r-envstats/package.py b/var/spack/repos/builtin/packages/r-envstats/package.py
index 21a2b1f9f7..812fb58a0a 100644
--- a/var/spack/repos/builtin/packages/r-envstats/package.py
+++ b/var/spack/repos/builtin/packages/r-envstats/package.py
@@ -23,6 +23,7 @@ class REnvstats(RPackage):
cran = "EnvStats"
+ version('2.7.0', sha256='09a6f0d5b60856c7298371e4a8a085a1db7abf0e71ccb9a2dc9ca24248fb5d81')
version('2.5.0', sha256='4f77aa66c9dbbe411370a6dd5b9e514823d5506bbcdad9dc09a9e4268d65a7f7')
version('2.4.0', sha256='49459e76412037b3d8021bd83ee93d140bc3e715a2a2282a347ef60061900514')
version('2.3.1', sha256='d753d42b42ff28c1cd25c63916fb2aa9e325941672fb16f7dfd97e218416cf2a')
diff --git a/var/spack/repos/builtin/packages/r-ergm/package.py b/var/spack/repos/builtin/packages/r-ergm/package.py
index 80798d4081..d3a3078c06 100644
--- a/var/spack/repos/builtin/packages/r-ergm/package.py
+++ b/var/spack/repos/builtin/packages/r-ergm/package.py
@@ -17,6 +17,8 @@ class RErgm(RPackage):
cran = "ergm"
+ version('4.2.2', sha256='ced92b0a32c78c85546d665c32fb3993fe77a3809aa88f43c3eee39e2577f2f0')
+ version('4.2.1', sha256='484769eb69d127a9e9adf5c1c8c88106d5fbaf4aaf2f915621d7f043c7cab0f5')
version('4.1.2', sha256='1abc6ef53376a4132530c376ce477ae7a2590e95fe8feb011c0da9cfb4d49ba0')
version('3.11.0', sha256='4e5506b44badc2343be3657acbf2bca51b47d7c187ff499d5a5e70a9811fe9f2')
version('3.10.4', sha256='885f0b1a23c5a2c1947962350cfab66683dfdfd1db173c115e90396d00831f22')
@@ -24,6 +26,7 @@ class RErgm(RPackage):
version('3.7.1', sha256='91dd011953b93ecb2b84bb3ababe7bddae25d9d86e69337156effd1da84b54c3')
depends_on('r@3.5:', type=('build', 'run'), when='@4.1.2:')
+ depends_on('r@4.0:', type=('build', 'run'), when='@4.2.1:')
depends_on('r-network@1.15:', type=('build', 'run'))
depends_on('r-network@1.17:', type=('build', 'run'), when='@4.1.2:')
depends_on('r-robustbase@0.93-5:', type=('build', 'run'))
@@ -40,6 +43,7 @@ class RErgm(RPackage):
depends_on('r-statnet-common@4.3.0:', type=('build', 'run'))
depends_on('r-statnet-common@4.4.0:', type=('build', 'run'), when='@3.11.0:')
depends_on('r-statnet-common@4.5.0:', type=('build', 'run'), when='@4.1.2:')
+ depends_on('r-statnet-common@4.6.0:', type=('build', 'run'), when='@4.2.1:')
depends_on('r-rle', type=('build', 'run'), when='@3.11.0:')
depends_on('r-rle@0.9.2:', type=('build', 'run'), when='@4.1.2:')
depends_on('r-purrr@0.3.2:', type=('build', 'run'), when='@3.10.0:')
@@ -49,6 +53,10 @@ class RErgm(RPackage):
depends_on('r-memoise@2.0.0:', type=('build', 'run'), when='@4.1.2:')
depends_on('r-tibble@2.1.1:', type=('build', 'run'), when='@3.10.0:')
depends_on('r-tibble@3.1.0:', type=('build', 'run'), when='@4.1.2:')
+ depends_on('r-magrittr@2.0.1:', type=('build', 'run'), when='@4.2.1:')
+ depends_on('r-knitr', type=('build', 'run'), when='@4.2.1:')
+ depends_on('r-digest', type=('build', 'run'), when='@4.2.1:')
+ depends_on('r-stringr', type=('build', 'run'), when='@4.2.1:')
depends_on('r-dplyr@0.8.0.1:', type=('build', 'run'), when='@3.10.0:3.10.4')
depends_on('r-lpsolve@5.6.13:', type=('build', 'run'), when='@:3.11.0')
diff --git a/var/spack/repos/builtin/packages/r-evaluate/package.py b/var/spack/repos/builtin/packages/r-evaluate/package.py
index f820461717..0dbf18e88f 100644
--- a/var/spack/repos/builtin/packages/r-evaluate/package.py
+++ b/var/spack/repos/builtin/packages/r-evaluate/package.py
@@ -14,6 +14,7 @@ class REvaluate(RPackage):
cran = "evaluate"
+ version('0.15', sha256='885aee530a8b6aa7fd3acaa1ecd94ab58b71038c879ca37405f948e105907c5d')
version('0.14', sha256='a8c88bdbe4e60046d95ddf7e181ee15a6f41cdf92127c9678f6f3d328a3c5e28')
version('0.10.1', sha256='c9a763895d3f460dbf87c43a6469e4b41a251a74477df8c5d7e7d2b66cdd1b1c')
version('0.10', sha256='6163baeb382c2c1e87d4e36a2e986ef74673d8a92ea8508c39ac662ff3519657')
diff --git a/var/spack/repos/builtin/packages/r-evd/package.py b/var/spack/repos/builtin/packages/r-evd/package.py
index 2f5dcd37fb..43c73e5c67 100644
--- a/var/spack/repos/builtin/packages/r-evd/package.py
+++ b/var/spack/repos/builtin/packages/r-evd/package.py
@@ -17,4 +17,5 @@ class REvd(RPackage):
cran = "evd"
+ version('2.3-6', sha256='8edb8bc4f06d246c4343fd923bb5d5df99724d6db8821bfd996220343a834cb6')
version('2.3-3', sha256='2fc5ef2e0c3a2a9392425ddd45914445497433d90fb80b8c363877baee4559b4')
diff --git a/var/spack/repos/builtin/packages/r-exactextractr/package.py b/var/spack/repos/builtin/packages/r-exactextractr/package.py
index e522f5a302..fe0b043ade 100644
--- a/var/spack/repos/builtin/packages/r-exactextractr/package.py
+++ b/var/spack/repos/builtin/packages/r-exactextractr/package.py
@@ -14,6 +14,7 @@ class RExactextractr(RPackage):
cran = "exactextractr"
+ version('0.8.2', sha256='cc32ab3af8d881a7e7836c296ea42f3fdabf3373ec1de0b154dbfe9870ee8a74')
version('0.7.2', sha256='2eb2b5eb2156cca875e7004b80687589217abd6fce5ebb7d8acb7fa71f6e6958')
version('0.5.1', sha256='47ddfb4b9e42e86957e03b1c745d657978d7c4bed12ed3aa053e1bc89f20616d')
version('0.3.0', sha256='c7fb38b38b9dc8b3ca5b8f1f84f4ba3256efd331f2b4636b496d42689ffc3fb0')
diff --git a/var/spack/repos/builtin/packages/r-expint/package.py b/var/spack/repos/builtin/packages/r-expint/package.py
index c332bf93b7..b8160d4190 100644
--- a/var/spack/repos/builtin/packages/r-expint/package.py
+++ b/var/spack/repos/builtin/packages/r-expint/package.py
@@ -20,6 +20,7 @@ class RExpint(RPackage):
cran = "expint"
+ version('0.1-7', sha256='7cfbd77e5c8ee2f4be5d12d3dd364819a146cbb6d533a00801a763c2ee51a005')
version('0.1-6', sha256='c7d13a8e299a91e94622047fe22b0006137e7bf82e34d10871b631fa58115145')
version('0.1-5', sha256='b03d60938cd6cf615aa3a02b1bf73436785eca89eaff56059ee0807b8244718a')
diff --git a/var/spack/repos/builtin/packages/r-fansi/package.py b/var/spack/repos/builtin/packages/r-fansi/package.py
index 25245b0cb9..d51726271a 100644
--- a/var/spack/repos/builtin/packages/r-fansi/package.py
+++ b/var/spack/repos/builtin/packages/r-fansi/package.py
@@ -14,6 +14,7 @@ class RFansi(RPackage):
cran = "fansi"
+ version('1.0.3', sha256='86a7b83d8c9d28baebbde310cd0b459d0950a9c7ff1a6276ce5858f6a89bc06a')
version('1.0.2', sha256='d1e2cf2e10613abe19071e3dab7c564ebcf85ad13cbee25fa1999267af01b557')
version('0.5.0', sha256='9d1bf8c316969c163abd3dd41cc1425b2671df9471fe806bf8783794a19ca54f')
version('0.4.1', sha256='3c69eec803a3827e5227f9cf084976eeb738b22c7eb7665bb5faa251bce41e09')
diff --git a/var/spack/repos/builtin/packages/r-fastmatrix/package.py b/var/spack/repos/builtin/packages/r-fastmatrix/package.py
index 9310f8cfa2..2a4ffc40aa 100644
--- a/var/spack/repos/builtin/packages/r-fastmatrix/package.py
+++ b/var/spack/repos/builtin/packages/r-fastmatrix/package.py
@@ -28,6 +28,7 @@ class RFastmatrix(RPackage):
cran = "fastmatrix"
+ version('0.4-1', sha256='494a1aad38dcec28956eba8d095c964b20c5388dfb6dc2a23848ae37ea61cde5')
version('0.3-8196', sha256='72fae07c627b995a091ccc3e14b2b2167474e3b1f14d723e87252538cf978fb6')
version('0.3', sha256='d92e789454a129db5f6f5b23e0d2245f3d55ff34b167427af265b9a6331e7c21')
diff --git a/var/spack/repos/builtin/packages/r-fda/package.py b/var/spack/repos/builtin/packages/r-fda/package.py
index b4a4b751c5..e84c3580d9 100644
--- a/var/spack/repos/builtin/packages/r-fda/package.py
+++ b/var/spack/repos/builtin/packages/r-fda/package.py
@@ -17,9 +17,11 @@ class RFda(RPackage):
cran = 'fda'
+ version('6.0.3', sha256='205814b9812664e8201221f99e0e8391aa49dba2ae287dc404c57c0c492477d3')
version('5.5.1', sha256='dcaa2f6ae226d35855bc79c6967f60d45404b984c0afaec215b139c4b8dea23a')
depends_on('r@3.5:', type=('build', 'run'))
- depends_on('r-matrix', type=('build', 'run'))
depends_on('r-fds', type=('build', 'run'))
depends_on('r-desolve', type=('build', 'run'))
+
+ depends_on('r-matrix', type=('build', 'run'), when='@5.5.1')
diff --git a/var/spack/repos/builtin/packages/r-ff/package.py b/var/spack/repos/builtin/packages/r-ff/package.py
index dc07b73e14..e20f3edee0 100644
--- a/var/spack/repos/builtin/packages/r-ff/package.py
+++ b/var/spack/repos/builtin/packages/r-ff/package.py
@@ -54,6 +54,7 @@ class RFf(RPackage):
cran = "ff"
+ version('4.0.7', sha256='0a47333d31c7afc3f95387166e21a3e4c763cbef47d9b5927753aef4ff8d83fa')
version('4.0.5', sha256='9aba9e271144ec224063ddba0d791e2fcdb9c912d48fdc49e204fce628355037')
version('4.0.4', sha256='22ecf1811263f27c9fd9f7e13e77f97dcbc0b8ae6f59b76dbaed77569c13d2e5')
version('2.2-14', sha256='1c6307847275b1b8ad9e2ffdce3f4df3c9d955dc2e8a45e3fd7bfd2b0926e2f0')
diff --git a/var/spack/repos/builtin/packages/r-filehash/package.py b/var/spack/repos/builtin/packages/r-filehash/package.py
index ab59a33946..bd137ac30c 100644
--- a/var/spack/repos/builtin/packages/r-filehash/package.py
+++ b/var/spack/repos/builtin/packages/r-filehash/package.py
@@ -21,6 +21,7 @@ class RFilehash(RPackage):
cran = "filehash"
+ version('2.4-3', sha256='f394e2c93233e8ad1c104562ea9349855dc8e303131f559cd59834f9aa3e41bd')
version('2.4-2', sha256='b6d056f75d45e315943a4618f5f62802612cd8931ba3f9f474b595140a3cfb93')
version('2.4-1', sha256='d0e087d338d89372c251c18fc93b53fb24b1750ea154833216ff16aff3b1eaf4')
version('2.3', sha256='63b098df9a2cf4aac862cd7bf86ae516e00852a8ad0f3090f9721b6b173e6edb')
diff --git a/var/spack/repos/builtin/packages/r-fitdistrplus/package.py b/var/spack/repos/builtin/packages/r-fitdistrplus/package.py
index f41fe7584a..609b40dee3 100644
--- a/var/spack/repos/builtin/packages/r-fitdistrplus/package.py
+++ b/var/spack/repos/builtin/packages/r-fitdistrplus/package.py
@@ -22,6 +22,7 @@ class RFitdistrplus(RPackage):
cran = "fitdistrplus"
+ version('1.1-8', sha256='f3c72310f40773b3839a9506c3cb781d044e09b94f2f38d332bb24e5f9960f5a')
version('1.1-6', sha256='17c2990041a3bb7479f3c3a6d13d96c989db8eaddab17eff7e1fbe172a5b96be')
version('1.1-3', sha256='776d5456e14398e44b78b3d7db526559bb7a3537e546a29c88aa192141c756de')
version('1.0-14', sha256='85082590f62aa08d99048ea3414c5cc1e5b780d97b3779d2397c6cb435470083')
diff --git a/var/spack/repos/builtin/packages/r-flexclust/package.py b/var/spack/repos/builtin/packages/r-flexclust/package.py
index 0695fdb3e5..b751f161e0 100644
--- a/var/spack/repos/builtin/packages/r-flexclust/package.py
+++ b/var/spack/repos/builtin/packages/r-flexclust/package.py
@@ -19,6 +19,7 @@ class RFlexclust(RPackage):
cran = "flexclust"
+ version('1.4-1', sha256='d67977df059e622832358069509f8968d506074320a45d34bfd21c65f898538d')
version('1.4-0', sha256='82fe445075a795c724644864c7ee803c5dd332a89ea9e6ccf7cd1ae2d1ecfc74')
version('1.3-5', sha256='dbf49969c93a7b314d9dc3299a0764ed9a804ba7dcbdc08a1235f244f4b85059')
diff --git a/var/spack/repos/builtin/packages/r-fnn/package.py b/var/spack/repos/builtin/packages/r-fnn/package.py
index 0ec946e921..9bba92ea17 100644
--- a/var/spack/repos/builtin/packages/r-fnn/package.py
+++ b/var/spack/repos/builtin/packages/r-fnn/package.py
@@ -15,6 +15,7 @@ class RFnn(RPackage):
cran = "FNN"
+ version('1.1.3.1', sha256='52b0e20611481a95bced40be4126f44b002fd3a9c4c9674bb34db4e1e3b5be5a')
version('1.1.3', sha256='de763a25c9cfbd19d144586b9ed158135ec49cf7b812938954be54eb2dc59432')
version('1.1.2.2', sha256='b51a60fbbeff58c48cc90c2023c48972d5082d68efd02284c17ccd9820986326')
version('1.1', sha256='b2a2e97af14aa50ef4dce15a170e1d7329aebb7643bab4a6cf35609555acccce')
diff --git a/var/spack/repos/builtin/packages/r-formatr/package.py b/var/spack/repos/builtin/packages/r-formatr/package.py
index 3d70213129..69c85fc123 100644
--- a/var/spack/repos/builtin/packages/r-formatr/package.py
+++ b/var/spack/repos/builtin/packages/r-formatr/package.py
@@ -18,6 +18,7 @@ class RFormatr(RPackage):
cran = "formatR"
+ version('1.12', sha256='8b52efbf43cbef25d837bb99a793a590c0958b753052c032b52304724e808c8b')
version('1.11', sha256='bd81662d09cf363652761e63ba5969c71be4dd5ae6fc9098f440d6729254a30c')
version('1.7', sha256='a366621b3ff5f8e86a499b6f87858ad47eefdace138341b1377ecc307a5e5ddb')
version('1.6', sha256='f5c98f0c3506ca51599671a2cdbc17738d0f326e8e3bb18b7a38e9f172122229')
diff --git a/var/spack/repos/builtin/packages/r-future-apply/package.py b/var/spack/repos/builtin/packages/r-future-apply/package.py
index 1ce9b47e6e..b757d6138a 100644
--- a/var/spack/repos/builtin/packages/r-future-apply/package.py
+++ b/var/spack/repos/builtin/packages/r-future-apply/package.py
@@ -19,6 +19,7 @@ class RFutureApply(RPackage):
cran = "future.apply"
+ version('1.9.0', sha256='6166c1c5ce30b9745059c3d30c8110f7c1d51871e58aa414f195cb1f91c467f5')
version('1.8.1', sha256='0d5bc3cb0289665bb27ae4ccad51fcc5ebf6dca46872b0a4e57790b9dc0aa6c7')
version('1.7.0', sha256='2ffa6adb55f239918ce9679b7eac8dcc4bf2e6bed35c9cbedf4bf90d906345db')
version('1.3.0', sha256='6374eca49bb81e05c013509c8e324cf9c5d023f9f8217b29ce7b7e12025ca371')
@@ -27,6 +28,7 @@ class RFutureApply(RPackage):
depends_on('r-future@1.13.0:', type=('build', 'run'))
depends_on('r-future@1.17.0:', type=('build', 'run'), when='@1.7.0:')
depends_on('r-future@1.21.0:', type=('build', 'run'), when='@1.8.1:')
+ depends_on('r-future@1.22.1:', type=('build', 'run'), when='@1.9.0:')
depends_on('r-globals@0.12.4:', type=('build', 'run'))
depends_on('r-globals@0.12.5:', type=('build', 'run'), when='@1.7.0:')
depends_on('r-globals@0.14.0:', type=('build', 'run'), when='@1.8.1:')
diff --git a/var/spack/repos/builtin/packages/r-future/package.py b/var/spack/repos/builtin/packages/r-future/package.py
index 020cadeb8b..6e0161680c 100644
--- a/var/spack/repos/builtin/packages/r-future/package.py
+++ b/var/spack/repos/builtin/packages/r-future/package.py
@@ -26,6 +26,7 @@ class RFuture(RPackage):
cran = "future"
+ version('1.26.1', sha256='a35c0bdae86265ebe86119231802b6fbf7b1d533b57cb423d8483fbe779390d5')
version('1.24.0', sha256='7b8b212ba0e9d6303bfc15c512e6cf9b5db3a7aa0b2462d2e15cdd84dd09b276')
version('1.23.0', sha256='d869c80e837c0937a414b8050deff081aefeac586b796f3d634d64f0f4fdb8f8')
version('1.22.1', sha256='87b24a85caf08e1d809eab28f9258444105cd7788eee2e3e2f21727ba3bbedcd')
@@ -36,6 +37,7 @@ class RFuture(RPackage):
depends_on('r-globals@0.12.4:', type=('build', 'run'))
depends_on('r-globals@0.13.1:', type=('build', 'run'), when='@1.21.0:')
depends_on('r-globals@0.14.0:', type=('build', 'run'), when='@1.22.0:')
+ depends_on('r-globals@0.15.0:', type=('build', 'run'), when='@1.26.1:')
depends_on('r-listenv@0.7.0:', type=('build', 'run'))
depends_on('r-listenv@0.8.0:', type=('build', 'run'), when='@1.21.0:')
depends_on('r-parallelly@1.21.0:', type=('build', 'run'), when='@1.21.0:')
diff --git a/var/spack/repos/builtin/packages/r-gamlss-dist/package.py b/var/spack/repos/builtin/packages/r-gamlss-dist/package.py
index ae71c083e5..b650b221af 100644
--- a/var/spack/repos/builtin/packages/r-gamlss-dist/package.py
+++ b/var/spack/repos/builtin/packages/r-gamlss-dist/package.py
@@ -21,6 +21,7 @@ class RGamlssDist(RPackage):
cran = "gamlss.dist"
+ version('6.0-3', sha256='ec90ea83cd81b894c73f987f69814077697be33abf0708e0f3e2a39d02c912bf')
version('6.0-1', sha256='b563b4de6bcedcfa4f8d29198a47004e38fd2de6e0509c788015d4e3feb18154')
version('5.1-7', sha256='9871c38c893a8df7874c533351858dfe4e7587c71021dbbf88c0c76ff3c0ef5b')
version('5.1-4', sha256='343c6ca0fd8a1c1dfdf9ffc65c95d4dae0c6c80b3e60fccba003e5171f3d287e')
@@ -28,4 +29,5 @@ class RGamlssDist(RPackage):
version('5.1-1', sha256='44f999ff74ee516757eb39c8308c48aa850523aad2f38e622268313a13dda0b1')
depends_on('r@2.15:', type=('build', 'run'))
+ depends_on('r@3.5.0:', type=('build', 'run'), when='@6.0-3:')
depends_on('r-mass', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-gamlss/package.py b/var/spack/repos/builtin/packages/r-gamlss/package.py
index b1291ddfaa..d5671bf22b 100644
--- a/var/spack/repos/builtin/packages/r-gamlss/package.py
+++ b/var/spack/repos/builtin/packages/r-gamlss/package.py
@@ -18,6 +18,7 @@ class RGamlss(RPackage):
cran = "gamlss"
+ version('5.4-3', sha256='6619d4fdc183ab492615d44961a126c827d18db20a0d59362e54de877f0a3076')
version('5.3-4', sha256='72707187471fd35c5379ae8c9b7b0ca87e302557f09cb3979d1cdb2e2500b01a')
version('5.2-0', sha256='d3927547109064cbe7b0f955144f53204b5dc86c6b2dbc8f0551a74140ab02e1')
version('5.1-4', sha256='e2fc36fe6ca3a69d69cdafd9533a4ff35090fdfb01df126f6a49156f4aa3376c')
diff --git a/var/spack/repos/builtin/packages/r-gdalutilities/package.py b/var/spack/repos/builtin/packages/r-gdalutilities/package.py
index 249942e869..c9192558ea 100644
--- a/var/spack/repos/builtin/packages/r-gdalutilities/package.py
+++ b/var/spack/repos/builtin/packages/r-gdalutilities/package.py
@@ -23,6 +23,7 @@ class RGdalutilities(RPackage):
cran = "gdalUtilities"
+ version('1.2.1', sha256='8f5dcc0c077bf972da9d574c62c992935311afb76a97f03ace719bc6da214a9c')
version('1.2.0', sha256='ead446f7f77f952b72b9ed80c5e415cb9d8d30cfb2439c8d1a8156fa55e2b65b')
depends_on('r-sf', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-gdata/package.py b/var/spack/repos/builtin/packages/r-gdata/package.py
index 018561f277..3017846beb 100644
--- a/var/spack/repos/builtin/packages/r-gdata/package.py
+++ b/var/spack/repos/builtin/packages/r-gdata/package.py
@@ -33,6 +33,7 @@ class RGdata(RPackage):
cran = "gdata"
+ version('2.18.0.1', sha256='5e2f3d5b9398d52a4c07a4d35f5f936450a44567c7db8d8f68b4cc6946e032d9')
version('2.18.0', sha256='4b287f59f5bbf5fcbf18db16477852faac4a605b10c5284c46b93fa6e9918d7f')
version('2.17.0', sha256='8097ec0e4868f6bf746f821cff7842f696e874bb3a84f1b2aa977ecd961c3e4e')
diff --git a/var/spack/repos/builtin/packages/r-geiger/package.py b/var/spack/repos/builtin/packages/r-geiger/package.py
index 49cefe3d81..ab59267ebe 100644
--- a/var/spack/repos/builtin/packages/r-geiger/package.py
+++ b/var/spack/repos/builtin/packages/r-geiger/package.py
@@ -14,6 +14,8 @@ class RGeiger(RPackage):
cran = "geiger"
+ version('2.0.10', sha256='2895cfb73fb91764be2ec3f931e4f3b2e75ae00a1431af4b40dc90e7c0693be0')
+ version('2.0.9', sha256='c8c8c871b4eb03ba1dc2fd49db304741b16ede99fe49bb5f9b2c220b9e2a8066')
version('2.0.7', sha256='d200736c4ad7ed4bc55a13e7d0126ddc7fed88e245cd5706d4692aaa437e9596')
version('2.0.6.2', sha256='9153047b608d652821251206d1450bb3f517c8884379f498a695315574ae001d')
version('2.0.6.1', sha256='2a95e20a3a90c096343b014344dd97e699e954da99c151c17fc6c245c77dba0b')
diff --git a/var/spack/repos/builtin/packages/r-generics/package.py b/var/spack/repos/builtin/packages/r-generics/package.py
index ba568bce60..8a7133fbd1 100644
--- a/var/spack/repos/builtin/packages/r-generics/package.py
+++ b/var/spack/repos/builtin/packages/r-generics/package.py
@@ -15,6 +15,7 @@ class RGenerics(RPackage):
cran = "generics"
+ version('0.1.2', sha256='63eab37a9148f820ce2d67bda3dab6dedb9db6890baa5284949c39ab1b4c5898')
version('0.1.1', sha256='a2478ebf1a0faa8855a152f4e747ad969a800597434196ed1f71975a9eb11912')
version('0.1.0', sha256='ab71d1bdbb66c782364c61cede3c1186d6a94c03635f9af70d926e2c1ac88763')
version('0.0.2', sha256='71b3d1b719ce89e71dd396ac8bc6aa5f1cd99bbbf03faff61dfbbee32fec6176')
diff --git a/var/spack/repos/builtin/packages/r-geojsonsf/package.py b/var/spack/repos/builtin/packages/r-geojsonsf/package.py
index 69b34e9e85..f5172388ed 100644
--- a/var/spack/repos/builtin/packages/r-geojsonsf/package.py
+++ b/var/spack/repos/builtin/packages/r-geojsonsf/package.py
@@ -13,6 +13,7 @@ class RGeojsonsf(RPackage):
cran = "geojsonsf"
+ version('2.0.3', sha256='275ca14672d982e6a95884515f49d8a0aad14f3be62ea01b675a91b0bffb46d1')
version('2.0.1', sha256='42df40433bfbece5a39cd97b5bd4690b4424855241fcc3e7322ee68a3988bfbf')
depends_on('r@3.3.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-geometry/package.py b/var/spack/repos/builtin/packages/r-geometry/package.py
new file mode 100644
index 0000000000..4a0a6f96d6
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-geometry/package.py
@@ -0,0 +1,31 @@
+# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class RGeometry(RPackage):
+ """Mesh Generation and Surface Tessellation.
+
+ Makes the 'Qhull' library <http://www.qhull.org> available in R, in a
+ similar manner as in Octave and MATLAB. Qhull computes convex hulls,
+ Delaunay triangulations, halfspace intersections about a point, Voronoi
+ diagrams, furthest-site Delaunay triangulations, and furthest-site Voronoi
+ diagrams. It runs in 2D, 3D, 4D, and higher dimensions. It implements the
+ Quickhull algorithm for computing the convex hull. Qhull does not support
+ constrained Delaunay triangulations, or mesh generation of non-convex
+ objects, but the package does include some R functions that allow for
+ this."""
+
+ cran = "geometry"
+
+ version('0.4.6', sha256='910465a8c8043faca73bcc7c81c9249b9938677ee6649468003b438a6503f5d8')
+
+ depends_on('r@3.0.0:', type=('build', 'run'))
+ depends_on('r-magic', type=('build', 'run'))
+ depends_on('r-rcpp', type=('build', 'run'))
+ depends_on('r-lpsolve', type=('build', 'run'))
+ depends_on('r-linprog', type=('build', 'run'))
+ depends_on('r-rcppprogress', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-geomorph/package.py b/var/spack/repos/builtin/packages/r-geomorph/package.py
index 4913b525b4..b2960696f9 100644
--- a/var/spack/repos/builtin/packages/r-geomorph/package.py
+++ b/var/spack/repos/builtin/packages/r-geomorph/package.py
@@ -16,6 +16,7 @@ class RGeomorph(RPackage):
cran = "geomorph"
+ version('4.0.3', sha256='8fd77bedf2ee85f1e4aaac4b22253810d12dba0b79d78d67695d237b7184e263')
version('4.0.1', sha256='9d54fba96dd8b8f2dcc8d0e4c427f6232bed1934da41f25084c16ec0b2c71117')
version('3.3.2', sha256='5f1d17cb98c54e40c4bbc650f7ccb5cb26e8d63934f810644facc69e91c1b7b7')
version('3.1.2', sha256='29cf1c484f756cb44808cfdbc20137a6fbc4bd0c5c6f98c6c3f397c5aebda8f1')
diff --git a/var/spack/repos/builtin/packages/r-gert/package.py b/var/spack/repos/builtin/packages/r-gert/package.py
index a44201a411..af6edb6c6c 100644
--- a/var/spack/repos/builtin/packages/r-gert/package.py
+++ b/var/spack/repos/builtin/packages/r-gert/package.py
@@ -17,6 +17,7 @@ class RGert(RPackage):
cran = "gert"
+ version('1.6.0', sha256='8c440aeebabf1cb3b57124ec9280e0f46b2ab56f2bca07d72b5c7a7f4edc2964')
version('1.5.0', sha256='9fc330893b0cb43360905fd204e674813e1906449a95dc4037fe8802bd74a2ae')
version('1.0.2', sha256='36687ab98291d50a35752fcb2e734a926a6b845345c18d36e3f48823f68304d3')
@@ -27,3 +28,4 @@ class RGert(RPackage):
depends_on('r-sys', type=('build', 'run'), when='@1.5.0:')
depends_on('r-zip@2.1.0:', type=('build', 'run'))
depends_on('libgit2@0.26:')
+ depends_on('libgit2@1.0:', when='@1.6.0:')
diff --git a/var/spack/repos/builtin/packages/r-ggdendro/package.py b/var/spack/repos/builtin/packages/r-ggdendro/package.py
index 25221cce64..a85822898c 100644
--- a/var/spack/repos/builtin/packages/r-ggdendro/package.py
+++ b/var/spack/repos/builtin/packages/r-ggdendro/package.py
@@ -19,6 +19,7 @@ class RGgdendro(RPackage):
cran = "ggdendro"
+ version('0.1.23', sha256='3a33e988c4fe12eec540876ad8ba09bda998773b2d2a90e043ebae4a69fa8eb8')
version('0.1.22', sha256='f0a65f3498c1abc3076df0fb56364b63bdf5d212d8931f85bcc6997510916b6a')
version('0.1-20', sha256='125cae904fa5d426cccaf32ebe9c6297e9ef0c6fd3f19f61513834d03a0cf8ff')
diff --git a/var/spack/repos/builtin/packages/r-ggfun/package.py b/var/spack/repos/builtin/packages/r-ggfun/package.py
index 6218356f5b..ee7a52caf0 100644
--- a/var/spack/repos/builtin/packages/r-ggfun/package.py
+++ b/var/spack/repos/builtin/packages/r-ggfun/package.py
@@ -14,6 +14,7 @@ class RGgfun(RPackage):
cran = "ggfun"
+ version('0.0.6', sha256='59989ed260fcc71cd95487cf3493113a2d8a47d273d9a2f3e5e842609620511b')
version('0.0.5', sha256='b1e340a8932d2cffbbbf6070ce96c9356599e9955a2b6534fcb17e599c575783')
version('0.0.4', sha256='5926365f9a90baf47320baf48c40f515ef570f9c767484adea5f04219964d21e')
diff --git a/var/spack/repos/builtin/packages/r-ggplot2/package.py b/var/spack/repos/builtin/packages/r-ggplot2/package.py
index 6bfa9085a8..d774fcfd32 100644
--- a/var/spack/repos/builtin/packages/r-ggplot2/package.py
+++ b/var/spack/repos/builtin/packages/r-ggplot2/package.py
@@ -16,6 +16,7 @@ class RGgplot2(RPackage):
cran = "ggplot2"
+ version('3.3.6', sha256='bfcb4eb92a0fcd3fab713aca4bb25e916e05914f2540271a45522ad7e43943a9')
version('3.3.5', sha256='b075294faf3af31b18e415f260c62d6000b218770e430484fe38819bdc3224ea')
version('3.3.3', sha256='45c29e2348dbd195bbde1197a52db7764113e57f463fd3770fb899acc33423cc')
version('3.2.0', sha256='31b6897fb65acb37913ff6e2bdc1b57f652360098ae3aa660abdcf54f84d73b3')
diff --git a/var/spack/repos/builtin/packages/r-git2r/package.py b/var/spack/repos/builtin/packages/r-git2r/package.py
index fd1d28e84d..a505ac1ac4 100644
--- a/var/spack/repos/builtin/packages/r-git2r/package.py
+++ b/var/spack/repos/builtin/packages/r-git2r/package.py
@@ -15,6 +15,7 @@ class RGit2r(RPackage):
cran = "git2r"
+ version('0.30.1', sha256='85d913ddc7659e32c1b98ebc247fa1cc1b7717a5bd413fa78ea84696986ca840')
version('0.29.0', sha256='f8f7a181dc0ac761f2a0c4099bfd744ded01c0e0832cab32dc5b4da32accd48e')
version('0.28.0', sha256='ce6d148d21d2c87757e98ef4474b2d09faded9b9b866f046bd26d4ca925e55f2')
version('0.27.1', sha256='099207f180aa45ddcc443cbb22487eafd14e1cd8e5979b3476214253fd773bc0')
diff --git a/var/spack/repos/builtin/packages/r-glmnet/package.py b/var/spack/repos/builtin/packages/r-glmnet/package.py
index bab2c30f98..f0bde64fdc 100644
--- a/var/spack/repos/builtin/packages/r-glmnet/package.py
+++ b/var/spack/repos/builtin/packages/r-glmnet/package.py
@@ -18,6 +18,7 @@ class RGlmnet(RPackage):
cran = "glmnet"
+ version('4.1-4', sha256='f6b0f70a0b3d81ff91c2b94f795a2a32e90dd458270f1a29e49e085dd65000f9')
version('4.1-3', sha256='64bc35aa40b6e580cfb8a21e649eb103e996e8747a10c476b8bb9545c846325a')
version('4.1', sha256='8f0af50919f488789ecf261f6e0907f367d89fca812baa2f814054fb2d0e40cb')
version('2.0-18', sha256='e8dce9d7b8105f9cc18ba981d420de64a53b09abee219660d3612915d554256b')
diff --git a/var/spack/repos/builtin/packages/r-globals/package.py b/var/spack/repos/builtin/packages/r-globals/package.py
index 73d293bed0..c7f1543286 100644
--- a/var/spack/repos/builtin/packages/r-globals/package.py
+++ b/var/spack/repos/builtin/packages/r-globals/package.py
@@ -17,6 +17,7 @@ class RGlobals(RPackage):
cran = "globals"
+ version('0.15.0', sha256='f83689a420590b0d62b049c40a944c1c8c7202b3f1cc12102712c63104e99496')
version('0.14.0', sha256='203dbccb829ca9cc6aedb6f5e79cb126ea31f8dd379dff9111ec66e3628c32f3')
version('0.12.4', sha256='7985356ad75afa1f795f8267a20dee847020c0207252dc075c614cef55d8fe6b')
diff --git a/var/spack/repos/builtin/packages/r-glue/package.py b/var/spack/repos/builtin/packages/r-glue/package.py
index 4833f3ea2c..0e75332df4 100644
--- a/var/spack/repos/builtin/packages/r-glue/package.py
+++ b/var/spack/repos/builtin/packages/r-glue/package.py
@@ -17,6 +17,7 @@ class RGlue(RPackage):
cran = "glue"
+ version('1.6.2', sha256='9da518f12be584c90e75fe8e07f711ee3f6fc0d03d817f72c25dc0f66499fdbf')
version('1.6.1', sha256='318c2f9544f1204216009f512793c44d6bbe178ff2012f56fa5ffb5e1da978db')
version('1.6.0', sha256='77bef37ef2c47aad6188ea772880591c5763cce4b1c256e10e68e7c3ec6b4338')
version('1.4.2', sha256='9f7354132a26e9a876428fa87629b9aaddcd558f9932328e6ac065b95b8ef7ad')
diff --git a/var/spack/repos/builtin/packages/r-gmodels/package.py b/var/spack/repos/builtin/packages/r-gmodels/package.py
index da2b29ee28..36ca04e4ca 100644
--- a/var/spack/repos/builtin/packages/r-gmodels/package.py
+++ b/var/spack/repos/builtin/packages/r-gmodels/package.py
@@ -11,9 +11,10 @@ class RGmodels(RPackage):
cran = "gmodels"
+ version('2.18.1.1', sha256='da7d48021b7cd2fd8a7cd8d0bb9658b12342a32698a13877b25ca94aa03f1e95')
version('2.18.1', sha256='626140a34eb8c53dd0a06511a76c71bc61c48777fa76fcc5e6934c9c276a1369')
version('2.16.2', sha256='ab018894bdb376c5bd6bc4fbc4fe6e86590f4106795a586ef196fbb6699ec47d')
depends_on('r@1.9.0:', type=('build', 'run'))
- depends_on('r-gdata', type=('build', 'run'))
depends_on('r-mass', type=('build', 'run'))
+ depends_on('r-gdata', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-gmp/package.py b/var/spack/repos/builtin/packages/r-gmp/package.py
index 0cd3a3b3aa..ee94fd5d7c 100644
--- a/var/spack/repos/builtin/packages/r-gmp/package.py
+++ b/var/spack/repos/builtin/packages/r-gmp/package.py
@@ -15,6 +15,7 @@ class RGmp(RPackage):
cran = "gmp"
+ version('0.6-5', sha256='8ae76f3d17542eab3e7468341dabeebe28b11da8c1b4b3f7bbdb00d379689e52')
version('0.6-2.1', sha256='c458026346c12093a22e627e2d5707a929fe95f4de3281894db4ab988d8747d6')
version('0.6-2', sha256='6bfcb45b3f1e7da27d8773f911027355cab371d150c3dabf7dbaf8fba85b7f0e')
version('0.5-13.5', sha256='f681ab2ff3d1e379ba8ac44a8abddd08d08170723e885abc0b469b6fa8fe5510')
diff --git a/var/spack/repos/builtin/packages/r-googlevis/package.py b/var/spack/repos/builtin/packages/r-googlevis/package.py
index 62491925c3..75550bd88a 100644
--- a/var/spack/repos/builtin/packages/r-googlevis/package.py
+++ b/var/spack/repos/builtin/packages/r-googlevis/package.py
@@ -17,6 +17,7 @@ class RGooglevis(RPackage):
cran = "googleVis"
+ version('0.7.0', sha256='5f1636024e678f9973e3ce605b46f46ea9cdffd58b98e315b495e66f34eb02e9')
version('0.6.11', sha256='f8c90b6c51da7bf184bff6762d98fc24faba1b634724ecdb987161ee10987b97')
version('0.6.9', sha256='0739d0a3382a73a824b5ff9a6fe329198dd05c9da5855ac051ed022d7b41b7ea')
version('0.6.4', sha256='7dcaf0e9d5e5598c17e8bd474141708de37eeb2578b09788431b9d871edb7eb8')
diff --git a/var/spack/repos/builtin/packages/r-gower/package.py b/var/spack/repos/builtin/packages/r-gower/package.py
index 5c5acb787e..e38398d016 100644
--- a/var/spack/repos/builtin/packages/r-gower/package.py
+++ b/var/spack/repos/builtin/packages/r-gower/package.py
@@ -15,5 +15,6 @@ class RGower(RPackage):
cran = "gower"
+ version('1.0.0', sha256='671cb7baafe05140d822e8f26f9cd3576fc3bf4c6572b7223fb54da754ea385d')
version('0.2.2', sha256='3f022010199fafe34f6e7431730642a76893e6b4249b84e5a61012cb83483631')
version('0.2.1', sha256='af3fbe91cf818c0841b2c0ec4ddf282c182a588031228c8d88f7291b2cdff100')
diff --git a/var/spack/repos/builtin/packages/r-gparotation/package.py b/var/spack/repos/builtin/packages/r-gparotation/package.py
index 1e20f6a0ff..de086a38fc 100644
--- a/var/spack/repos/builtin/packages/r-gparotation/package.py
+++ b/var/spack/repos/builtin/packages/r-gparotation/package.py
@@ -14,6 +14,7 @@ class RGparotation(RPackage):
cran = "GPArotation"
+ version('2022.4-1', sha256='231e7edcdcc091fbecfb4f2e88d1a4344967cf7ea58074b385a4b8b48d9da224')
version('2014.11-1', sha256='351bc15fc8dc6c8ea5045fbba22180d1e68314fc34d267545687748e312e5096')
depends_on('r@2.0.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-gplots/package.py b/var/spack/repos/builtin/packages/r-gplots/package.py
index a40a1fb6c6..a652519747 100644
--- a/var/spack/repos/builtin/packages/r-gplots/package.py
+++ b/var/spack/repos/builtin/packages/r-gplots/package.py
@@ -32,6 +32,7 @@ class RGplots(RPackage):
cran = "gplots"
+ version('3.1.3', sha256='9f853b9e205264d087e61e8825f797ce36c9eb585b187dab794563613a526716')
version('3.1.1', sha256='f9ae19c2574b6d41adbeccaf7bc66cf56d7b2769004daba7e0038d5fbd821339')
version('3.0.1.1', sha256='7db103f903a25d174cddcdfc7b946039b61e236c95084b90ad17f1a41da3770c')
version('3.0.1', sha256='343df84327ac3d03494992e79ee3afc78ba3bdc08af9a305ee3fb0a38745cb0a')
diff --git a/var/spack/repos/builtin/packages/r-grbase/package.py b/var/spack/repos/builtin/packages/r-grbase/package.py
index c66440c786..29b4b97dd0 100644
--- a/var/spack/repos/builtin/packages/r-grbase/package.py
+++ b/var/spack/repos/builtin/packages/r-grbase/package.py
@@ -26,15 +26,17 @@ class RGrbase(RPackage):
cran = "gRbase"
+ version('1.8.7', sha256='01d77e1b029ac22b4e13f07384285f363733a42aba842eddfc5e1aceea99f808')
version('1.8-6.7', sha256='aaafc7e1b521de60e1a57c0175ac64d4283850c3273bd14774cf24dabc743388')
version('1.8-3.4', sha256='d35f94c2fb7cbd4ce3991570424dfe6723a849658da32e13df29f53b6ea2cc2c')
depends_on('r+X', type=('build', 'run'))
depends_on('r@3.0.2:', type=('build', 'run'))
depends_on('r@3.6.0:', type=('build', 'run'), when='@1.8-6.7:')
+ depends_on('r-biocmanager', type=('build', 'run'), when='@1.8.7:')
depends_on('r-graph', type=('build', 'run'))
- depends_on('r-rgraphviz', type=('build', 'run'), when='@1.8-6.7:')
depends_on('r-rbgl', type=('build', 'run'))
+ depends_on('r-rgraphviz', type=('build', 'run'), when='@1.8-6.7:')
depends_on('r-igraph', type=('build', 'run'))
depends_on('r-magrittr', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-gsa/package.py b/var/spack/repos/builtin/packages/r-gsa/package.py
index 367545eef3..6f84c1f0fd 100644
--- a/var/spack/repos/builtin/packages/r-gsa/package.py
+++ b/var/spack/repos/builtin/packages/r-gsa/package.py
@@ -11,4 +11,5 @@ class RGsa(RPackage):
cran = "GSA"
+ version('1.03.2', sha256='177d6059fc645d3d8883806d2dea1c5dfc68efdada9aadde8a96b6d57acf35b8')
version('1.03.1', sha256='e192d4383f53680dbd556223ea5f8cad6bae62a80a337ba5fd8d05a8aee6a917')
diff --git a/var/spack/repos/builtin/packages/r-gsodr/package.py b/var/spack/repos/builtin/packages/r-gsodr/package.py
index 1da51f9c88..363a708e4c 100644
--- a/var/spack/repos/builtin/packages/r-gsodr/package.py
+++ b/var/spack/repos/builtin/packages/r-gsodr/package.py
@@ -29,6 +29,7 @@ class RGsodr(RPackage):
cran = "GSODR"
+ version('3.1.5', sha256='37682141707d7e29fab653ccdeb154fea2c085080f686b33f1a54140608e824d')
version('3.1.4', sha256='615ac4271b44a63064cb23632b887c60c86f4742957fc46f300423f8f75858c8')
version('2.1.2', sha256='4fc1d084b6c21055d8cc17a6a6dc412261aa0d4ef4079bcd73b580a8c16bf74e')
version('2.1.1', sha256='dba732e5bd1e367b9d710e6b8924f0c02fa4546202f049124dba02bc2e3329f5')
diff --git a/var/spack/repos/builtin/packages/r-gstat/package.py b/var/spack/repos/builtin/packages/r-gstat/package.py
index ca118369c3..02ea25f74d 100644
--- a/var/spack/repos/builtin/packages/r-gstat/package.py
+++ b/var/spack/repos/builtin/packages/r-gstat/package.py
@@ -17,6 +17,7 @@ class RGstat(RPackage):
cran = "gstat"
+ version('2.0-9', sha256='122c032c2e15388496853597ebcb5664e76cda96b164e9917ee66d1c24fba4a6')
version('2.0-8', sha256='57cb9e8235a39379a96af0a5651c82e02fdd608375917939948c3dbf170668e8')
version('2.0-6', sha256='6711e68aa2444cf2927879a03a976d8caeca5eac98d806b19a6a7178b90bfcab')
version('2.0-3', sha256='20a93fe6bf89221a5888de273bddf9a98187806d507cd3cd6297c2b13e7acce1')
diff --git a/var/spack/repos/builtin/packages/r-gtools/package.py b/var/spack/repos/builtin/packages/r-gtools/package.py
index b36f37b4ac..4c11fd7376 100644
--- a/var/spack/repos/builtin/packages/r-gtools/package.py
+++ b/var/spack/repos/builtin/packages/r-gtools/package.py
@@ -43,7 +43,10 @@ class RGtools(RPackage):
cran = "gtools"
+ version('3.9.2.1', sha256='ec5febad7bb33812684b39679b0bce8a668361b87714f7388546e0f4ac02af5f')
version('3.9.2', sha256='03b1898bf581f6d12fa90e23ff700cfa7c834ac10c6654bdac42d7ec943fa953')
version('3.8.2', sha256='503ba60a41f3c61b8129c25de62c74dab29761d2e661d4addd106e2e02f1dcde')
version('3.8.1', sha256='051484459bd8ad1b03425b8843d24f6828fea18f7357cfa1c192198cc3f4ba38')
version('3.5.0', sha256='86b6a51a92ddb3c78095e0c5dc20414c67f6e28f915bf0ee11406adad3e476f6')
+
+ depends_on('r@2.10:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-hardhat/package.py b/var/spack/repos/builtin/packages/r-hardhat/package.py
index 4c2fed79a9..b17ef44f17 100644
--- a/var/spack/repos/builtin/packages/r-hardhat/package.py
+++ b/var/spack/repos/builtin/packages/r-hardhat/package.py
@@ -19,10 +19,16 @@ class RHardhat(RPackage):
cran = "hardhat"
+ version('1.0.0', sha256='2740dc243a440e7d32370a78f9258255faea6d900075901cf6009c651769e7bd')
version('0.2.0', sha256='9497ca0fe6206c54d1da79f248d44c5faffc7d375b630091ef45dfca46c29628')
depends_on('r@2.10:', type=('build', 'run'))
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@1.0.0:')
depends_on('r-glue', type=('build', 'run'))
+ depends_on('r-glue@1.6.2:', type=('build', 'run'), when='@1.0.0:')
depends_on('r-rlang@0.4.2:', type=('build', 'run'))
+ depends_on('r-rlang@1.0.2:', type=('build', 'run'), when='@1.0.0:')
depends_on('r-tibble', type=('build', 'run'))
+ depends_on('r-tibble@3.1.7:', type=('build', 'run'), when='@1.0.0:')
depends_on('r-vctrs@0.3.0:', type=('build', 'run'))
+ depends_on('r-vctrs@0.4.1:', type=('build', 'run'), when='@1.0.0:')
diff --git a/var/spack/repos/builtin/packages/r-haven/package.py b/var/spack/repos/builtin/packages/r-haven/package.py
index 483f92ead2..59c1a8c1e2 100644
--- a/var/spack/repos/builtin/packages/r-haven/package.py
+++ b/var/spack/repos/builtin/packages/r-haven/package.py
@@ -14,6 +14,7 @@ class RHaven(RPackage):
cran = "haven"
+ version('2.5.0', sha256='b580311bc1b28efc6b123e29a331282b9f7eb552c485f4e5cacab39fe534aff4')
version('2.4.3', sha256='95b70f47e77792bed4312441787299d2e3e27d79a176f0638a37e5301b93295f')
version('2.3.1', sha256='6eee9f3297aab4cae2e4a4181ea65af933eacee2a2fb40af5b2ecf06f1bb9e0d')
version('2.1.1', sha256='90bcb4e7f24960e7aa3e15c06b95cd897f08de149cec43fd8ba110b14526068a')
@@ -22,8 +23,11 @@ class RHaven(RPackage):
depends_on('r@3.1:', type=('build', 'run'))
depends_on('r@3.2:', type=('build', 'run'), when='@2.1.1:')
+ depends_on('r@3.4:', type=('build', 'run'), when='@2.5.0:')
+ depends_on('r-cli@3.0.0:', type=('build', 'run'), when='@2.5.0:')
depends_on('r-forcats@0.2.0:', type=('build', 'run'))
depends_on('r-hms', type=('build', 'run'))
+ depends_on('r-lifecycle', type=('build', 'run'), when='@2.5.0:')
depends_on('r-readr@0.1.0:', type=('build', 'run'))
depends_on('r-rlang@0.4.0:', type=('build', 'run'), when='@2.3.1:')
depends_on('r-tibble', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-hmisc/package.py b/var/spack/repos/builtin/packages/r-hmisc/package.py
index 5943ac6f67..25ec800bcc 100644
--- a/var/spack/repos/builtin/packages/r-hmisc/package.py
+++ b/var/spack/repos/builtin/packages/r-hmisc/package.py
@@ -17,6 +17,7 @@ class RHmisc(RPackage):
cran = "Hmisc"
+ version('4.7-0', sha256='29ec2d9ca11c790c350e93323126bef4f498c69c41c31bb335fd04671e0f87bd')
version('4.6-0', sha256='2c1ce906b2333c6dc946dc7f10b74cfa552bce2b12dbebf295d143163562a1ad')
version('4.4-2', sha256='490ac64dd8558868e7c6fdd9523af102e17ea536c450d62c48b04155279bfbc8')
version('4.4-0', sha256='f16ecf4c5ee2202d51f426282a54f8000ffa8b9747c3e910205f34f878556ec7')
diff --git a/var/spack/repos/builtin/packages/r-httr/package.py b/var/spack/repos/builtin/packages/r-httr/package.py
index c5af44a4de..4acd5de1ef 100644
--- a/var/spack/repos/builtin/packages/r-httr/package.py
+++ b/var/spack/repos/builtin/packages/r-httr/package.py
@@ -15,6 +15,7 @@ class RHttr(RPackage):
cran = "httr"
+ version('1.4.3', sha256='9a8613fa96173ac910c021391af1ced4d0609169049c802cf7cdfe1c40897c6a')
version('1.4.2', sha256='462bed6ed0d92f811d5df4d294336025f1dbff357286999d9269bfd9c20b1ef9')
version('1.4.1', sha256='675c7e07bbe82c48284ee1ab929bb14a6e653abae2860d854dc41a3c028de156')
version('1.4.0', sha256='d633f1425da514f65f3b8c034ae0a8b6911995009840c6bb9657ceedb99ddb48')
diff --git a/var/spack/repos/builtin/packages/r-hwriter/package.py b/var/spack/repos/builtin/packages/r-hwriter/package.py
index ba4eb1e1bf..464c6c9813 100644
--- a/var/spack/repos/builtin/packages/r-hwriter/package.py
+++ b/var/spack/repos/builtin/packages/r-hwriter/package.py
@@ -14,6 +14,7 @@ class RHwriter(RPackage):
cran = "hwriter"
+ version('1.3.2.1', sha256='ed2fa254ab27cf65d397e181339976fc3261dfb4f6b600fea8c5689620dab6f3')
version('1.3.2', sha256='6b3531d2e7a239be9d6e3a1aa3256b2745eb68aa0bdffd2076d36552d0d7322b')
depends_on('r@2.6.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-igraph/package.py b/var/spack/repos/builtin/packages/r-igraph/package.py
index 4dbbec06b9..034729835b 100644
--- a/var/spack/repos/builtin/packages/r-igraph/package.py
+++ b/var/spack/repos/builtin/packages/r-igraph/package.py
@@ -15,6 +15,7 @@ class RIgraph(RPackage):
cran = "igraph"
+ version('1.3.1', sha256='505a2ba7c417ceaf869240cc1c9a5f3fbd75f8d9dfcfe048df1326c6ec41144e')
version('1.2.11', sha256='1c8b715eb61e6e7d9082858673929f8e84dc832c0a2a7aba7811511bbd2000de')
version('1.2.6', sha256='640da72166fda84bea2c0e5eee374f1ed80cd9439c1171d056b1b1737ae6c76d')
version('1.2.4.1', sha256='891acc763b5a4a4a245358a95dee69280f4013c342f14dd6a438e7bb2bf2e480')
@@ -29,5 +30,6 @@ class RIgraph(RPackage):
depends_on('gmp@4.38:', when='@1.2.11:')
depends_on('libxml2')
depends_on('glpk', when='@1.2.0:')
+ depends_on('glpk@4.57:', when='@1.3.1:')
depends_on('r-irlba', type=('build', 'run'), when='@:1.1.9')
diff --git a/var/spack/repos/builtin/packages/r-imager/package.py b/var/spack/repos/builtin/packages/r-imager/package.py
index 26e24290af..ec137efe74 100644
--- a/var/spack/repos/builtin/packages/r-imager/package.py
+++ b/var/spack/repos/builtin/packages/r-imager/package.py
@@ -18,6 +18,7 @@ class RImager(RPackage):
cran = "imager"
+ version('0.42.13', sha256='d90a9893d11190ba249c7fae5bd6517a77907efbce2941452cb2aec57bb5cf7f')
version('0.42.11', sha256='47f8b7ff8d05a5191e30ad1869f12a62bdbe3142b22b12a6032dec9b5f8532a8')
version('0.42.10', sha256='01939eb03ad2e1369a4240a128c3b246a4c56f572f1ea4967f1acdc555adaeee')
version('0.42.3', sha256='6fc308153df8251cef48f1e13978abd5d29ec85046fbe0b27c428801d05ebbf3')
diff --git a/var/spack/repos/builtin/packages/r-insight/package.py b/var/spack/repos/builtin/packages/r-insight/package.py
index 49ef46827c..fd36f420e9 100644
--- a/var/spack/repos/builtin/packages/r-insight/package.py
+++ b/var/spack/repos/builtin/packages/r-insight/package.py
@@ -21,6 +21,7 @@ class RInsight(RPackage):
cran = "insight"
+ version('0.17.1', sha256='653c5542a0c953ad4b75800e2ab52eed244e1e698aa5bc9fc64dc657a3cece35')
version('0.16.0', sha256='7944d7a386c99ea06d9d9e2b5f4aeb98fded7ec90b1cb908d03e278480be9e3d')
version('0.15.0', sha256='d6a148c3e1cfcb3829e2f8950bcbf98f500ee88bebd7e2482f9b085542e93fee')
version('0.14.1', sha256='0e7761997a46ee33039cdeff1779dbc210de3644e4444c6e893e4ef2f12cc129')
diff --git a/var/spack/repos/builtin/packages/r-ipred/package.py b/var/spack/repos/builtin/packages/r-ipred/package.py
index b874776715..d4a1f477e5 100644
--- a/var/spack/repos/builtin/packages/r-ipred/package.py
+++ b/var/spack/repos/builtin/packages/r-ipred/package.py
@@ -15,6 +15,7 @@ class RIpred(RPackage):
cran = "ipred"
+ version('0.9-13', sha256='6168a062d93c2d3063c064a8f242cd3716dee99822e20363a1801261319c4c98')
version('0.9-12', sha256='d6e1535704d39415a799d7643141ffa4f6f55597f03e763f4ccd5d8106005843')
version('0.9-9', sha256='0da87a70730d5a60b97e46b2421088765e7d6a7cc2695757eba0f9d31d86416f')
version('0.9-8', sha256='9c1d11c3cb0d72be7870e70a216e589e403bbfee38c796fe75cd0611d878ac07')
diff --git a/var/spack/repos/builtin/packages/r-iterators/package.py b/var/spack/repos/builtin/packages/r-iterators/package.py
index ccb5a071b4..cb96279c22 100644
--- a/var/spack/repos/builtin/packages/r-iterators/package.py
+++ b/var/spack/repos/builtin/packages/r-iterators/package.py
@@ -14,6 +14,7 @@ class RIterators(RPackage):
cran = "iterators"
+ version('1.0.14', sha256='cef3075a0930e1408c764e4da56bbadd4f7d14315809df8f38dd51f80ccc677b')
version('1.0.13', sha256='778e30e4c292da9f94d62acc637cf55273dae258199d847e62658f44840f11a4')
version('1.0.12', sha256='96bf31d60ebd23aefae105d9b7790715e63327eec0deb2ddfb3d543994ea9f4b')
version('1.0.9', sha256='de001e063805fdd124953b571ccb0ed2838c55e40cca2e9d283d8a90b0645e9b')
diff --git a/var/spack/repos/builtin/packages/r-jomo/package.py b/var/spack/repos/builtin/packages/r-jomo/package.py
index f951c7d119..cdae69d4b4 100644
--- a/var/spack/repos/builtin/packages/r-jomo/package.py
+++ b/var/spack/repos/builtin/packages/r-jomo/package.py
@@ -18,6 +18,7 @@ class RJomo(RPackage):
cran = "jomo"
+ version('2.7-3', sha256='9d3987f3a73d305f3ab6fc66efc04a196a7eb8b65e20c411131dc17af51f0063')
version('2.7-2', sha256='3962d5cbecc60e72670329dbef0dd74303080f5ea2a79c91e27f75db99ba6ce9')
version('2.6-9', sha256='b90f47071e62b8863b00b1ae710a56ae6efbfe2baeb9963f8a91a10d6183cc9b')
version('2.6-7', sha256='6e83dab51103511038a3e9a3c762e00cc45ae7080c0a0f64e37bcea8c488db53')
@@ -27,3 +28,4 @@ class RJomo(RPackage):
depends_on('r-survival', type=('build', 'run'))
depends_on('r-mass', type=('build', 'run'), when='@2.6-7:')
depends_on('r-ordinal', type=('build', 'run'), when='@2.6-7:')
+ depends_on('r-tibble', type=('build', 'run'), when='@2.7-3:')
diff --git a/var/spack/repos/builtin/packages/r-kernlab/package.py b/var/spack/repos/builtin/packages/r-kernlab/package.py
index 9b8845a63f..57cca4b272 100644
--- a/var/spack/repos/builtin/packages/r-kernlab/package.py
+++ b/var/spack/repos/builtin/packages/r-kernlab/package.py
@@ -16,6 +16,7 @@ class RKernlab(RPackage):
cran = "kernlab"
+ version('0.9-30', sha256='48fc3a839ae57e8ab6ec26a34093ca3306391e7b271bef6e69812e2b4859ee81')
version('0.9-29', sha256='c3da693a0041dd34f869e7b63a8d8cf7d4bc588ac601bcdddcf7d44f68b3106f')
version('0.9-27', sha256='f6add50ed4097f04d09411491625f8d46eafc4f003b1c1cff78a6fff8cc31dd4')
version('0.9-26', sha256='954940478c6fcf60433e50e43cf10d70bcb0a809848ca8b9d683bf371cd56077')
diff --git a/var/spack/repos/builtin/packages/r-klar/package.py b/var/spack/repos/builtin/packages/r-klar/package.py
index af65cdf5bd..c3ac2b53e1 100644
--- a/var/spack/repos/builtin/packages/r-klar/package.py
+++ b/var/spack/repos/builtin/packages/r-klar/package.py
@@ -20,9 +20,14 @@ class RKlar(RPackage):
cran = "klaR"
+ version('1.7-0', sha256='b4795250ef19fd1b5e1b9a59343fd01159a33dbdbb504a06258220e37a718198')
version('0.6-15', sha256='5bfe5bc643f8a64b222317732c26e9f93be297cdc318a869f15cc9ab0d9e0fae')
depends_on('r@2.10.0:', type=('build', 'run'))
depends_on('r-mass', type=('build', 'run'))
depends_on('r-combinat', type=('build', 'run'))
depends_on('r-questionr', type=('build', 'run'))
+
+ # NOTE: The svmlight interface is not built. The external svmlight package
+ # dates back to 2008, and does not build with modern compilers. In
+ # addition, the tarfile is unversioned and its distribution is restricted.
diff --git a/var/spack/repos/builtin/packages/r-knitr/package.py b/var/spack/repos/builtin/packages/r-knitr/package.py
index f1ee5e7654..514a8513bb 100644
--- a/var/spack/repos/builtin/packages/r-knitr/package.py
+++ b/var/spack/repos/builtin/packages/r-knitr/package.py
@@ -15,6 +15,7 @@ class RKnitr(RPackage):
cran = "knitr"
+ version('1.39', sha256='c91a65edebdca779af7f7480fa6636667497c9291ad55d6efd982db0bb91ac72')
version('1.37', sha256='39cd2a4848baebbe7fa0c0ab8200179690fb5b9190f0c1688d987c38363ad763')
version('1.33', sha256='2f83332b0a880de6eae522271bda7f862c97693fba45c23ab1f772028f6c0909')
version('1.30', sha256='3aabb13566a234131ba18b78d690104f9468a982dc711f81344a985318c7c93e')
@@ -28,7 +29,9 @@ class RKnitr(RPackage):
depends_on('r@3.0.2:', type=('build', 'run'), when='@1.10:1.14')
depends_on('r@3.1.0:', type=('build', 'run'), when='@1.15:1.22')
depends_on('r@3.2.3:', type=('build', 'run'), when='@1.23:')
+ depends_on('r@3.3.0:', type=('build', 'run'), when='@1.39:')
depends_on('r-evaluate@0.10:', type=('build', 'run'))
+ depends_on('r-evaluate@0.15:', type=('build', 'run'), when='@1.39:')
depends_on('r-highr', type=('build', 'run'))
depends_on('r-stringr@0.6:', type=('build', 'run'))
depends_on('r-yaml@2.1.19:', type=('build', 'run'))
@@ -37,6 +40,7 @@ class RKnitr(RPackage):
depends_on('r-xfun@0.19:', type=('build', 'run'), when='@1.31')
depends_on('r-xfun@0.21:', type=('build', 'run'), when='@1.32:')
depends_on('r-xfun@0.27:', type=('build', 'run'), when='@1.37:')
+ depends_on('r-xfun@0.29:', type=('build', 'run'), when='@1.39:')
depends_on('pandoc', type='build')
depends_on('py-rst2pdf', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-ks/package.py b/var/spack/repos/builtin/packages/r-ks/package.py
index 4fc91ddf30..8f5c8baa4f 100644
--- a/var/spack/repos/builtin/packages/r-ks/package.py
+++ b/var/spack/repos/builtin/packages/r-ks/package.py
@@ -16,6 +16,7 @@ class RKs(RPackage):
cran = "ks"
+ version('1.13.5', sha256='d1c4d06d704f301628455787ba929add1e774debc343d0952a768abea6cc7815')
version('1.13.3', sha256='defb80df665d987f1751899f7a9809cb5a770f3c74266d7fbc7b9493616dce73')
version('1.11.7', sha256='6a6d9c2366e85a4c6af39b798f3798d20a42615ddfcebcedf6cf56087cdfd2b8')
version('1.11.5', sha256='4f65565376391b8a6dcce76168ef628fd4859dba8496910cbdd54e4f88e8d51b')
diff --git a/var/spack/repos/builtin/packages/r-labelled/package.py b/var/spack/repos/builtin/packages/r-labelled/package.py
index 9843dee958..2f78c97e16 100644
--- a/var/spack/repos/builtin/packages/r-labelled/package.py
+++ b/var/spack/repos/builtin/packages/r-labelled/package.py
@@ -16,6 +16,7 @@ class RLabelled(RPackage):
cran = "labelled"
+ version('2.9.1', sha256='9eb10b245f64f3fb7346121aa4cd98638946e1cc4208dd5e28791ef8fd62fa40')
version('2.9.0', sha256='36ac0e169ee065a8bced9417efeb85d62e1504a590d4321667d8a6213285d639')
version('2.7.0', sha256='b1b66b34d3ad682e492fc5bb6431780760576d29dbac40d87bef3c0960054bdb')
diff --git a/var/spack/repos/builtin/packages/r-lars/package.py b/var/spack/repos/builtin/packages/r-lars/package.py
index 585be7f7b6..5b38cc0d86 100644
--- a/var/spack/repos/builtin/packages/r-lars/package.py
+++ b/var/spack/repos/builtin/packages/r-lars/package.py
@@ -14,6 +14,7 @@ class RLars(RPackage):
cran = "lars"
+ version('1.3', sha256='c69e6a8da6a3344c0915dd1fd4c78fec5cdf50c62cf6297476e9bb7dc10b549d')
version('1.2', sha256='64745b568f20b2cfdae3dad02fba92ebf78ffee466a71aaaafd4f48c3921922e')
version('1.1', sha256='a8e4a0efb9ca6760dec1cadf395d9a805508455a2c3ced18cc53d9b8fa70cdc0')
version('0.9-8', sha256='8c64cb31073ea0785346bb716485da8db2fae14153a52e5a8d151bc9cb4906e5')
diff --git a/var/spack/repos/builtin/packages/r-lavaan/package.py b/var/spack/repos/builtin/packages/r-lavaan/package.py
index 1aac757a02..1e19fbf4fe 100644
--- a/var/spack/repos/builtin/packages/r-lavaan/package.py
+++ b/var/spack/repos/builtin/packages/r-lavaan/package.py
@@ -14,6 +14,7 @@ class RLavaan(RPackage):
cran = "lavaan"
+ version('0.6-11', sha256='2cc193b82463a865cd8dadb7332409fdebf47e4035d5fe8dbf3414a7ae18d308')
version('0.6-10', sha256='4d6944eb6d5743e7a2a2c7b56aec5d5de78585a52789be235839fb9f5f468c37')
version('0.6-9', sha256='d404c4eb40686534f9c05f24f908cd954041f66d1072caea4a3adfa83a5f108a')
version('0.6-8', sha256='40e204909100b7338619ae23cd87e0a4058e581c286da2327f36dbb3834b84a2')
diff --git a/var/spack/repos/builtin/packages/r-ldheatmap/package.py b/var/spack/repos/builtin/packages/r-ldheatmap/package.py
index 7c8f2cc981..d52211cd0a 100644
--- a/var/spack/repos/builtin/packages/r-ldheatmap/package.py
+++ b/var/spack/repos/builtin/packages/r-ldheatmap/package.py
@@ -20,6 +20,7 @@ class RLdheatmap(RPackage):
cran = "LDheatmap"
+ version('1.0-6', sha256='4cca2eea380b2a00b9958b5191ec442df24d60cd462e6634a21eaaa0fd4c293f')
version('1.0-4', sha256='07eb385f19e6a195e8e4d75be0b47c57744eabbf14045e527f0c27e1183ae5ca')
version('0.99-7', sha256='aca54c839a424506d8be7153bf03b32026aeefe7ed38f534e8e19708e34212e4')
diff --git a/var/spack/repos/builtin/packages/r-leafem/package.py b/var/spack/repos/builtin/packages/r-leafem/package.py
index 5c28ea77de..8378d6d822 100644
--- a/var/spack/repos/builtin/packages/r-leafem/package.py
+++ b/var/spack/repos/builtin/packages/r-leafem/package.py
@@ -18,6 +18,7 @@ class RLeafem(RPackage):
cran = "leafem"
+ version('0.2.0', sha256='97eb78b3eaf6012940f2c4f73effd8ff2d39aa46fef5f2ddf0005990b07dba8d')
version('0.1.6', sha256='ca50e0a699f564449248511857a2df0d48cd07de3157e099478a19b533088156')
version('0.1.3', sha256='6f123fc15efadb85d317c01003e3b7af5dc925cffe0bbe774b1b39b6bd67f304')
diff --git a/var/spack/repos/builtin/packages/r-leaflet/package.py b/var/spack/repos/builtin/packages/r-leaflet/package.py
index 57113ccff9..a0f825d180 100644
--- a/var/spack/repos/builtin/packages/r-leaflet/package.py
+++ b/var/spack/repos/builtin/packages/r-leaflet/package.py
@@ -15,6 +15,7 @@ class RLeaflet(RPackage):
cran = "leaflet"
+ version('2.1.1', sha256='32f6a043759a0d2d98ea05739b7b4c55a266aa01272e48243e3c44046c7a5677')
version('2.0.4.1', sha256='b0f038295f1de5d32d9ffa1d0dbc1562320190f2f1365f3a5e95863fff88901f')
version('2.0.2', sha256='fa448d20940e01e953e0706fc5064b0fa347e69fa967792599eb03c52b2e3114')
version('2.0.1', sha256='9876d5adf3235ea5683db79ec2435d3997c626774e8c4ec4ef14022e24dfcf06')
@@ -24,6 +25,7 @@ class RLeaflet(RPackage):
depends_on('r-base64enc', type=('build', 'run'))
depends_on('r-crosstalk', type=('build', 'run'), when='@2.0.0:')
depends_on('r-htmlwidgets', type=('build', 'run'))
+ depends_on('r-htmlwidgets@1.5.4:', type=('build', 'run'), when='@2.1.1:')
depends_on('r-htmltools', type=('build', 'run'))
depends_on('r-magrittr', type=('build', 'run'))
depends_on('r-markdown', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-leiden/package.py b/var/spack/repos/builtin/packages/r-leiden/package.py
index 0d37871235..40ea6d8e64 100644
--- a/var/spack/repos/builtin/packages/r-leiden/package.py
+++ b/var/spack/repos/builtin/packages/r-leiden/package.py
@@ -17,6 +17,7 @@ class RLeiden(RPackage):
cran = "leiden"
+ version('0.4.2', sha256='cace86748c4aa1720508210658ee2f63f7875be5bac215084001fdc59d22e2bd')
version('0.3.9', sha256='81754276e026a9a8436476365bbadf0f15a403a525a349cb56418da5d8edea0d')
version('0.3.6', sha256='a7096e38c4010b1f0baf6a7e1139362520b44c0e548b0b79584cb827172822cc')
version('0.3.1', sha256='17fa1e49667fdd30ef5166506181c8514ae406f68f0878a026ee111bff11f8a5')
@@ -24,3 +25,4 @@ class RLeiden(RPackage):
depends_on('r-reticulate', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-igraph', type=('build', 'run'))
+ depends_on('r-igraph@1.2.7:', type=('build', 'run'), when='@0.4.2:')
diff --git a/var/spack/repos/builtin/packages/r-lfe/package.py b/var/spack/repos/builtin/packages/r-lfe/package.py
index a178b07e06..7ca5111863 100644
--- a/var/spack/repos/builtin/packages/r-lfe/package.py
+++ b/var/spack/repos/builtin/packages/r-lfe/package.py
@@ -22,6 +22,7 @@ class RLfe(RPackage):
cran = "lfe"
+ version('2.8-8', sha256='0fc22928fa16f22ee66c8e426a0e994346ad2f67b3c5aea597f3eeffbd85ab71')
version('2.8-7.1', sha256='d6a1efd8c43f84fa291e4959938f16e85bf5feef113515aaca1fe90075a78c50')
version('2.8-6', sha256='bf5fd362e9722e871a5236f30da562c489ae6506b667609b9465eefa8f101612')
version('2.8-5', sha256='fd80c573d334594db933ff38f67bd4c9f899aaf648c3bd68f19477a0059723c2')
diff --git a/var/spack/repos/builtin/packages/r-lhs/package.py b/var/spack/repos/builtin/packages/r-lhs/package.py
index 43062dab92..154b8de32a 100644
--- a/var/spack/repos/builtin/packages/r-lhs/package.py
+++ b/var/spack/repos/builtin/packages/r-lhs/package.py
@@ -14,6 +14,7 @@ class RLhs(RPackage):
cran = "lhs"
+ version('1.1.5', sha256='7a3c6fdcc953490e51026e17a0b1a9dc0ca8d03e6fc989457a7cdda2075b6339')
version('1.1.3', sha256='e43b8d48db1cf26013697e2a798ed1d31d1ee1790f2ebfecb280176c0e0c06d1')
version('1.1.1', sha256='903e9f2adde87f6f9ad41dd52ff83d28a645dba69934c7535142cb48f10090dc')
version('1.0.1', sha256='a4d5ac0c6f585f2880364c867fa94e6554698beb65d3678ba5938dd84fc6ea53')
diff --git a/var/spack/repos/builtin/packages/r-linprog/package.py b/var/spack/repos/builtin/packages/r-linprog/package.py
new file mode 100644
index 0000000000..8ac9adbefd
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-linprog/package.py
@@ -0,0 +1,20 @@
+# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class RLinprog(RPackage):
+ """Linear Programming / Optimization.
+
+ Can be used to solve Linear Programming / Linear Optimization problems by
+ using the simplex algorithm."""
+
+ cran = "linprog"
+
+ version('0.9-4', sha256='81a6aa2fdc075f12dc912794d0554f87705a8b872b99c89a90a69ee9ada864b4')
+
+ depends_on('r@2.4.0:', type=('build', 'run'))
+ depends_on('r-lpsolve', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-lme4/package.py b/var/spack/repos/builtin/packages/r-lme4/package.py
index bde027c408..15de1dbf5a 100644
--- a/var/spack/repos/builtin/packages/r-lme4/package.py
+++ b/var/spack/repos/builtin/packages/r-lme4/package.py
@@ -16,6 +16,7 @@ class RLme4(RPackage):
cran = "lme4"
+ version('1.1-29', sha256='83d97de48cc4706a5a9615b126ba1a86f1a3009d3f38b8da3e57dd619519e826')
version('1.1-27.1', sha256='25fa873e39b8192e48c15eec93db8c8bf6f03baf3bd8d5ca9188482ce8442ec5')
version('1.1-27', sha256='fe0391c76c78188ac1eefb18014d0607212c909b55474d985a919b55efe5a15f')
version('1.1-26', sha256='364b6d6fb0a574dfed2d75cfdc79411aa53e2c1dd625b70bb1d25d026f9e4253')
@@ -32,6 +33,7 @@ class RLme4(RPackage):
depends_on('r-nlme@3.1-123:', type=('build', 'run'))
depends_on('r-minqa@1.1.15:', type=('build', 'run'))
depends_on('r-nloptr@1.0.4:', type=('build', 'run'))
- depends_on('r-statmod', type=('build', 'run'), when='@1.1-26')
depends_on('r-rcpp@0.10.5:', type=('build', 'run'))
depends_on('r-rcppeigen', type=('build', 'run'))
+
+ depends_on('r-statmod', type=('build', 'run'), when='@1.1-26')
diff --git a/var/spack/repos/builtin/packages/r-lmtest/package.py b/var/spack/repos/builtin/packages/r-lmtest/package.py
index 7ec9ec1d66..8c75a95e53 100644
--- a/var/spack/repos/builtin/packages/r-lmtest/package.py
+++ b/var/spack/repos/builtin/packages/r-lmtest/package.py
@@ -15,6 +15,7 @@ class RLmtest(RPackage):
cran = "lmtest"
+ version('0.9-40', sha256='64400d4d6cc635316531042971f1783539686e9015c76f5741c07304fa14d997')
version('0.9-39', sha256='71f8d67cbe559b33fe02910a3e98cddc60c9dcc421c64f7878c647218f07d488')
version('0.9-38', sha256='32a22cea45398ffc5732d9f5c0391431d0cdd3a9e29cc7b77bea32c1eb4a216b')
version('0.9-37', sha256='ddc929f94bf055974832fa4a20fdd0c1eb3a84ee11f716c287936f2141d5ca0a')
diff --git a/var/spack/repos/builtin/packages/r-locfit/package.py b/var/spack/repos/builtin/packages/r-locfit/package.py
index fb79019ef4..f45b7e94f7 100644
--- a/var/spack/repos/builtin/packages/r-locfit/package.py
+++ b/var/spack/repos/builtin/packages/r-locfit/package.py
@@ -14,9 +14,11 @@ class RLocfit(RPackage):
cran = "locfit"
+ version('1.5-9.5', sha256='fd9f2bad9d8beec8be4843dc80e38ebe0f388835a7003490f67e57eeb9e6de23')
version('1.5-9.4', sha256='d9d3665c5f3d49f698fb4675daf40a0550601e86db3dc00f296413ceb1099ced')
version('1.5-9.1', sha256='f524148fdb29aac3a178618f88718d3d4ac91283014091aa11a01f1c70cd4e51')
depends_on('r@2.0.1:', type=('build', 'run'))
depends_on('r@3.5.0:', type=('build', 'run'), when='@1.5-9.4:')
+ depends_on('r@4.1.0:', type=('build', 'run'), when='@1.5-9.5:')
depends_on('r-lattice', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-loo/package.py b/var/spack/repos/builtin/packages/r-loo/package.py
index 449e403614..d2c22729d9 100644
--- a/var/spack/repos/builtin/packages/r-loo/package.py
+++ b/var/spack/repos/builtin/packages/r-loo/package.py
@@ -22,6 +22,7 @@ class RLoo(RPackage):
cran = "loo"
+ version('2.5.1', sha256='866a2f54a4e8726cc3062e27daa8a073e6ac4aeb6719af7845284f7a668745f1')
version('2.4.1', sha256='bc21fb6b4a93a7e95ee1be57e4e787d731895fb8b4743c26b30b43adee475b50')
version('2.3.1', sha256='d98de21b71d9d9386131ae5ba4da051362c3ad39e0305af4f33d830f299ae08b')
version('2.1.0', sha256='1bf4a1ef85d151577ff96d4cf2a29c9ef24370b0b1eb08c70dcf45884350e87d')
diff --git a/var/spack/repos/builtin/packages/r-magic/package.py b/var/spack/repos/builtin/packages/r-magic/package.py
index 6aa56cf4f4..1e2369abc2 100644
--- a/var/spack/repos/builtin/packages/r-magic/package.py
+++ b/var/spack/repos/builtin/packages/r-magic/package.py
@@ -22,6 +22,7 @@ class RMagic(RPackage):
cran = "magic"
+ version('1.6-0', sha256='4516d48c9618e3f395db873e886f5deb3b66b32ebe10d4c26c1420ac848acbbf')
version('1.5-9', sha256='fa1d5ef2d39e880f262d31b77006a2a7e76ea38e306aae4356e682b90d6cd56a')
version('1.5-8', sha256='7f8bc26e05003168e9d2dadf64eb9a34b51bc41beba482208874803dee7d6c20')
version('1.5-6', sha256='1b6c3f5bef0ddc28c4b68894051df5d9c0d4985d9e6ad81892369d0f7fe0298d')
diff --git a/var/spack/repos/builtin/packages/r-magrittr/package.py b/var/spack/repos/builtin/packages/r-magrittr/package.py
index a0c8311580..5449f959f0 100644
--- a/var/spack/repos/builtin/packages/r-magrittr/package.py
+++ b/var/spack/repos/builtin/packages/r-magrittr/package.py
@@ -17,6 +17,9 @@ class RMagrittr(RPackage):
cran = "magrittr"
+ version('2.0.3', sha256='a2bff83f792a1acb801bfe6330bb62724c74d5308832f2cb6a6178336ace55d2')
version('2.0.2', sha256='7be6fd0d0da75b92d8bad0136076da96260ee84bf639ef632a24668acdc163a6')
version('2.0.1', sha256='75c265d51cc2b34beb27040edb09823c7b954d3990a7a931e40690b75d4aad5f')
version('1.5', sha256='05c45943ada9443134caa0ab24db4a962b629f00b755ccf039a2a2a7b2c92ae8')
+
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@2.0.3:')
diff --git a/var/spack/repos/builtin/packages/r-maptools/package.py b/var/spack/repos/builtin/packages/r-maptools/package.py
index c406d9718f..b3be387623 100644
--- a/var/spack/repos/builtin/packages/r-maptools/package.py
+++ b/var/spack/repos/builtin/packages/r-maptools/package.py
@@ -17,6 +17,7 @@ class RMaptools(RPackage):
cran = "maptools"
+ version('1.1-4', sha256='f3ee25f9787d97c8373dac3651c6a198c932948eb3a6006b8618c91c6344fdc9')
version('1.1-2', sha256='3995c96e8472cd6717fe3cbd3506358ff460b6c2cf92dbe4b00f75f507514439')
version('1.0-2', sha256='daac6da5817cf0cff17b9e7d4a7cdc7c329574249bd9b1bafdb6c9431e1fee49')
version('0.9-5', sha256='5d9511f09fb49d57a51f28495b02239800596a4fcfad7b03ee1074d793657bdd')
diff --git a/var/spack/repos/builtin/packages/r-mapview/package.py b/var/spack/repos/builtin/packages/r-mapview/package.py
index be7448066c..d546fb167b 100644
--- a/var/spack/repos/builtin/packages/r-mapview/package.py
+++ b/var/spack/repos/builtin/packages/r-mapview/package.py
@@ -16,6 +16,7 @@ class RMapview(RPackage):
cran = "mapview"
+ version('2.11.0', sha256='87f8cf562a0918201082a743438b9af47429bdb8871511235d72505107f4d30a')
version('2.10.0', sha256='b597902c654b9abf1163bb9d4f1044fef85d0a52c8dc6538ca46b0024f63baaa')
version('2.9.0', sha256='170cb2b5e67cbeb177f87bd2eab1ecabc44a1042addbcd95a85b2ec4a00eb690')
diff --git a/var/spack/repos/builtin/packages/r-mass/package.py b/var/spack/repos/builtin/packages/r-mass/package.py
index c370c452c7..be1cfd1ce0 100644
--- a/var/spack/repos/builtin/packages/r-mass/package.py
+++ b/var/spack/repos/builtin/packages/r-mass/package.py
@@ -14,6 +14,7 @@ class RMass(RPackage):
cran = "MASS"
+ version('7.3-57', sha256='bd8b880105bc1aadb2db699086f74bd92a8611287979a24243187f9d80795a8d')
version('7.3-55', sha256='65299cbc8f3fd5e09cb3535eabcb3faad2308e01d5ba9422145cc04d7d0c31a4')
version('7.3-54', sha256='b800ccd5b5c2709b1559cf5eab126e4935c4f8826cf7891253432bb6a056e821')
version('7.3-53', sha256='41824e70ada302a620226c0f17b1b2c880c6d1a3a100b53bd6df8e8c97e64b38')
diff --git a/var/spack/repos/builtin/packages/r-mathjaxr/package.py b/var/spack/repos/builtin/packages/r-mathjaxr/package.py
index e66bbf093f..c7a2e55ce9 100644
--- a/var/spack/repos/builtin/packages/r-mathjaxr/package.py
+++ b/var/spack/repos/builtin/packages/r-mathjaxr/package.py
@@ -14,5 +14,6 @@ class RMathjaxr(RPackage):
cran = "mathjaxr"
+ version('1.6-0', sha256='ecc47607111b788d84789459af7f4f9102719f98640b7a23bd5a4eb1a6d3c179')
version('1.4-0', sha256='ba57378236d593a39c5839054adc5473526de0c8f05b7eeb87c99438496ddc67')
version('1.0-1', sha256='0d3d370c4d0c7c7c6d5541d4e0ae50170b4084ca8a66e8a43bd92c7d1c112148')
diff --git a/var/spack/repos/builtin/packages/r-matlab/package.py b/var/spack/repos/builtin/packages/r-matlab/package.py
index 1311124129..aa56956b58 100644
--- a/var/spack/repos/builtin/packages/r-matlab/package.py
+++ b/var/spack/repos/builtin/packages/r-matlab/package.py
@@ -13,6 +13,7 @@ class RMatlab(RPackage):
cran = "matlab"
+ version('1.0.4', sha256='1988a2220703444a575f2bad4eb090a0da71478599eb53081dd7237b7ec216ea')
version('1.0.2', sha256='a23dec736c51ae1864c1a53caac556a2f98e8020138a3b121badb0f5b7984154')
depends_on('r@2.15:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-matrix/package.py b/var/spack/repos/builtin/packages/r-matrix/package.py
index 01608c2bc7..f4779a98b7 100644
--- a/var/spack/repos/builtin/packages/r-matrix/package.py
+++ b/var/spack/repos/builtin/packages/r-matrix/package.py
@@ -16,6 +16,7 @@ class RMatrix(RPackage):
cran = "Matrix"
+ version('1.4-1', sha256='42b24f1d1e94482b0ff0ef1292e2df29f69694bdbee47b3d6bfeec46fafb2f7e')
version('1.4-0', sha256='c2b463702e4051b621f5e2b091a33f883f1caa97703d65f7a52b78caf81206f6')
version('1.3-4', sha256='ab42179d44545e99bbdf44bb6d04cab051dd2aba552b1f6edd51ed71b55f6c39')
version('1.3-3', sha256='f77ec8de43ae7bfa19dfdc7e76bfefbb21b3223dbc174423fcde70b44cf36a3b')
diff --git a/var/spack/repos/builtin/packages/r-matrixstats/package.py b/var/spack/repos/builtin/packages/r-matrixstats/package.py
index b596a62621..9bfcec8636 100644
--- a/var/spack/repos/builtin/packages/r-matrixstats/package.py
+++ b/var/spack/repos/builtin/packages/r-matrixstats/package.py
@@ -17,6 +17,7 @@ class RMatrixstats(RPackage):
cran = "matrixStats"
+ version('0.62.0', sha256='85e2016b6dd20cbfe32d38a2ef2578ae80e688d9a3590aefd1d2f4bf4bd44eca')
version('0.61.0', sha256='dbd3c0ec59b1ae62ff9b4c2c90c4687cbd680d1796f6fdd672319458d4d2fd9a')
version('0.58.0', sha256='8367b4b98cd24b6e40022cb2b11e907aa0bcf5ee5b2f89fefb186f53661f4b49')
version('0.57.0', sha256='f9681887cd3b121762c83f55f189cae26cb8443efce91fcd212ac714fde9f343')
diff --git a/var/spack/repos/builtin/packages/r-mclust/package.py b/var/spack/repos/builtin/packages/r-mclust/package.py
index 37277685c9..87faa9d6cc 100644
--- a/var/spack/repos/builtin/packages/r-mclust/package.py
+++ b/var/spack/repos/builtin/packages/r-mclust/package.py
@@ -17,6 +17,7 @@ class RMclust(RPackage):
cran = "mclust"
+ version('5.4.10', sha256='2a1bbbf3c4a17df08d1ba8bc4d3c6d9c7241ed5fd68b8aabe660115597b60672')
version('5.4.9', sha256='65f123c6af86cf5eb511c81ae0eafa60da7b2085bfea1a08bdc3116081da9568')
version('5.4.7', sha256='45f5a666caee5bebd3160922b8655295a25e37f624741f6574365e4ac5a14c23')
version('5.4.5', sha256='75f2963082669485953e4306ffa93db98335ee6afdc1318b95d605d56cb30a72')
diff --git a/var/spack/repos/builtin/packages/r-mcmcpack/package.py b/var/spack/repos/builtin/packages/r-mcmcpack/package.py
index 497d0c600e..e19932ed76 100644
--- a/var/spack/repos/builtin/packages/r-mcmcpack/package.py
+++ b/var/spack/repos/builtin/packages/r-mcmcpack/package.py
@@ -19,12 +19,16 @@ class RMcmcpack(RPackage):
cran = "MCMCpack"
+ version('1.6-3', sha256='cb14ba20690b31fd813b05565484c866425f072a5ad99a5cbf1da63588958db3')
version('1.6-0', sha256='b5b9493457d11d4dca12f7732bd1b3eb1443852977c8ee78393126f13deaf29b')
version('1.5-0', sha256='795ffd3d62bf14d3ecb3f5307bd329cd75798cf4b270ff0e768bc71a35de0ace')
depends_on('r@3.6:', type=('build', 'run'))
depends_on('r-coda@0.11-3:', type=('build', 'run'))
- depends_on('r-mass', type=('build', 'run'))
depends_on('r-lattice', type=('build', 'run'))
depends_on('r-mcmc', type=('build', 'run'))
depends_on('r-quantreg', type=('build', 'run'))
+
+ depends_on('r-mass', type=('build', 'run'), when='@:1.6-0')
+
+ conflicts('%gcc@:3')
diff --git a/var/spack/repos/builtin/packages/r-mda/package.py b/var/spack/repos/builtin/packages/r-mda/package.py
index 4c37a9bc70..2821c89dd8 100644
--- a/var/spack/repos/builtin/packages/r-mda/package.py
+++ b/var/spack/repos/builtin/packages/r-mda/package.py
@@ -14,6 +14,7 @@ class RMda(RPackage):
cran = "mda"
+ version('0.5-3', sha256='bda6409c17f385fae97da458cc742334e7b47aab8217a975b7551e2e18d38463')
version('0.5-2', sha256='344f2053215ddf535d1554b4539e9b09067dac878887cc3eb995cef421fc00c3')
version('0.4-10', sha256='7036bc622a8fea5b2de94fc19e6b64f5f0c27e5d743ae7646e116af08c9de6a5')
version('0.4-9', sha256='b72456d2fa5b49895644489735d21cf4836d3d597f5e693e6103cce1887ffd85')
diff --git a/var/spack/repos/builtin/packages/r-metap/package.py b/var/spack/repos/builtin/packages/r-metap/package.py
index 44de67d288..16f8033bf5 100644
--- a/var/spack/repos/builtin/packages/r-metap/package.py
+++ b/var/spack/repos/builtin/packages/r-metap/package.py
@@ -17,6 +17,7 @@ class RMetap(RPackage):
cran = "metap"
+ version('1.8', sha256='ee9501a8de8a4c47af1632e6053e42ef53fc4b8bdf0f2759edc4d3eefaf5552b')
version('1.7', sha256='d9b511607d0e37de4428549061c5577a4e812b0f55bb7ed887d1b24711f58c42')
version('1.4', sha256='5fac23d823d0ad4eebc3f97620364e25f7b41f8d0c3579f6c09ec059940b85a5')
version('1.1', sha256='20120428672d39dc15829c7e66850fc4350a34df290d48cef0b1cc78d13f7b82')
@@ -28,3 +29,4 @@ class RMetap(RPackage):
depends_on('r-tfisher', type=('build', 'run'), when='@1.4:')
depends_on('r-mutoss', type=('build', 'run'), when='@1.4:')
depends_on('r-mathjaxr@0.8-3:', type=('build', 'run'), when='@1.4:')
+ depends_on('r-qqconf', type=('build', 'run'), when='@1.8:')
diff --git a/var/spack/repos/builtin/packages/r-mgcv/package.py b/var/spack/repos/builtin/packages/r-mgcv/package.py
index cc6cde5375..bf39fb2b1f 100644
--- a/var/spack/repos/builtin/packages/r-mgcv/package.py
+++ b/var/spack/repos/builtin/packages/r-mgcv/package.py
@@ -19,6 +19,7 @@ class RMgcv(RPackage):
cran = "mgcv"
+ version('1.8-40', sha256='dbe627266c3b339232e2d4228d5370ba88c86540319e6891d161242efba7e4a5')
version('1.8-38', sha256='cd12ed5787d6fdcead34e782e48b62b3f9efd523616c906e2da77bd9c142ddbb')
version('1.8-33', sha256='98cb7bac928e2c9564091a9af31e5d309305c6c5fcf96e8429c08925fe6f2bf4')
version('1.8-28', sha256='b55ea8227cd5c263c266c3885fa3299aa6bd23b54186517f9299bf38a7bdd3ea')
diff --git a/var/spack/repos/builtin/packages/r-mockery/package.py b/var/spack/repos/builtin/packages/r-mockery/package.py
index 3165838ce5..c016e62466 100644
--- a/var/spack/repos/builtin/packages/r-mockery/package.py
+++ b/var/spack/repos/builtin/packages/r-mockery/package.py
@@ -17,6 +17,7 @@ class RMockery(RPackage):
cran = "mockery"
+ version('0.4.3', sha256='9fc9f1565c51e51b33634e9fc5328211559a561f095bc4d0fa8bd8b7533d476a')
version('0.4.2', sha256='988e249c366ee7faf277de004084cf5ca24b5c8a8c6e3842f1b1362ce2f7ea9b')
version('0.4.1', sha256='959d83f8b21e9a89c06c73f310356790c2d63d5ba39b2b60c6777a4eb33909c1')
version('0.4.0', sha256='cecbd865b67d8d29b47d6c931e386189625d5885328a2931a65ade3ff9bc8e7b')
diff --git a/var/spack/repos/builtin/packages/r-mpm/package.py b/var/spack/repos/builtin/packages/r-mpm/package.py
index 0c076354e9..343d056929 100644
--- a/var/spack/repos/builtin/packages/r-mpm/package.py
+++ b/var/spack/repos/builtin/packages/r-mpm/package.py
@@ -15,6 +15,7 @@ class RMpm(RPackage):
cran = "mpm"
+ version('1.0-23', sha256='d2abda28246842b187b796a730c6e0590182960fda3bbf16ce4a1d5e5b13fbca')
version('1.0-22', sha256='d3ba4053cd57a189cb65c5fa20e6a4152374aead8c985254cb6e550e36e23272')
depends_on('r@2.10:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-multcomp/package.py b/var/spack/repos/builtin/packages/r-multcomp/package.py
index f86a41109f..779ec2fac1 100644
--- a/var/spack/repos/builtin/packages/r-multcomp/package.py
+++ b/var/spack/repos/builtin/packages/r-multcomp/package.py
@@ -17,6 +17,7 @@ class RMultcomp(RPackage):
cran = "multcomp"
+ version('1.4-19', sha256='f03473b1cfbc714cd85a0ee948e2ecdb23bcdccbe95e27237ee25e9c71e3e557')
version('1.4-18', sha256='107a5e65cfff158b271d7386240dc8672d8cf45313f016e0ed83767faf7c2806')
version('1.4-15', sha256='9927607efb3eb84ac3d25d82daf2faef6a69e05a334b163ce43fd31c14b19bce')
version('1.4-10', sha256='29bcc635c0262e304551b139cd9ee655ab25a908d9693e1cacabfc2a936df5cf')
diff --git a/var/spack/repos/builtin/packages/r-nanotime/package.py b/var/spack/repos/builtin/packages/r-nanotime/package.py
index 684343bc0a..791c839016 100644
--- a/var/spack/repos/builtin/packages/r-nanotime/package.py
+++ b/var/spack/repos/builtin/packages/r-nanotime/package.py
@@ -16,6 +16,7 @@ class RNanotime(RPackage):
cran = "nanotime"
+ version('0.3.6', sha256='df751a5cb11ca9ac8762cd1e33bc73e7d20fde9339d2c46bc6f85873388568df')
version('0.3.5', sha256='44deaae58452bacea4855d018212593811401c2afc460ffb11905479013923a0')
version('0.3.2', sha256='9ef53c3bca01b605a9519190117988e170e63865327007c90b05d31fe7f22b1d')
version('0.2.4', sha256='2dfb7e7435fec59634b87563a215467e7793e2711e302749c0533901c74eb184')
diff --git a/var/spack/repos/builtin/packages/r-network/package.py b/var/spack/repos/builtin/packages/r-network/package.py
index 25c3c20d26..d2581a74c1 100644
--- a/var/spack/repos/builtin/packages/r-network/package.py
+++ b/var/spack/repos/builtin/packages/r-network/package.py
@@ -15,6 +15,7 @@ class RNetwork(RPackage):
cran = "network"
+ version('1.17.2', sha256='9588a198807c8c68da147f479ca9af5bcb4468cf91b6a90b8044d313d9fa30f7')
version('1.17.1', sha256='fc3c3a0014f8895a11c33994c9b44c6ef6cc49c7d026cd41ae6bba5ef63005a7')
version('1.16.1', sha256='eb6435794cacc81abe1664391e8dcf1c10112bbb76fff9016dd6dbb8e83efeb1')
version('1.15', sha256='5cbe5c0369e5f8363e33a86f14fd33ce8727166106381627ecd13b7452e14cb3')
diff --git a/var/spack/repos/builtin/packages/r-nimble/package.py b/var/spack/repos/builtin/packages/r-nimble/package.py
index da609dcaf0..7b6f79d40b 100644
--- a/var/spack/repos/builtin/packages/r-nimble/package.py
+++ b/var/spack/repos/builtin/packages/r-nimble/package.py
@@ -26,6 +26,7 @@ class RNimble(RPackage):
cran = "nimble"
+ version('0.12.2', sha256='2af7a3ab159a7f0b3b4b139da1db45be4b602f2c0e115cb0403b060ab0101a1b')
version('0.12.1', sha256='3520f3212a48c8cbe08a6a8e57b3a72180594f7c09f647d1daf417c9857867d8')
version('0.10.1', sha256='11e248fda442f233c3590640efd9381c9b4b2e6fb66dce45a3391db03b70e702')
version('0.9.1', sha256='ad5e8a171193cb0172e68bf61c4f94432c45c131a150101ad1c5c7318c335757')
diff --git a/var/spack/repos/builtin/packages/r-nlme/package.py b/var/spack/repos/builtin/packages/r-nlme/package.py
index 8a861052b4..604f460cb7 100644
--- a/var/spack/repos/builtin/packages/r-nlme/package.py
+++ b/var/spack/repos/builtin/packages/r-nlme/package.py
@@ -13,6 +13,7 @@ class RNlme(RPackage):
cran = "nlme"
+ version('3.1-157', sha256='ddf2a2729dcb6cbaaf579d8093cf62fc41736648b5e8b74afc3acc7a9ae1d96c')
version('3.1-155', sha256='9f390f842852422921b5845130ea73c1f006d7bb5e988e82f728093a0cbdff4f')
version('3.1-153', sha256='3d27a98edf1b16ee868949e823ac0babbf10c937a7220d648b7ef9480cd680e3')
version('3.1-152', sha256='5b65d1b1f121caf29e60341acf6d85e267fd94ed517748cf42d36359f74e515e')
diff --git a/var/spack/repos/builtin/packages/r-nloptr/package.py b/var/spack/repos/builtin/packages/r-nloptr/package.py
index 2127d0e34d..d584b366a1 100644
--- a/var/spack/repos/builtin/packages/r-nloptr/package.py
+++ b/var/spack/repos/builtin/packages/r-nloptr/package.py
@@ -23,6 +23,7 @@ class RNloptr(RPackage):
cran = "nloptr"
+ version('2.0.3', sha256='7b26ac1246fd1bd890817b0c3a145456c11aec98458b8518de863650b99616d7')
version('2.0.0', sha256='65ca3149cfc9ba15ac10a91f34b5d86b20f5fd693f44e3edf3e392402911619a')
version('1.2.2.3', sha256='af08b74fd5e7b4cb455fe67ed759346cbb8f3b9a4178f5f117e0092e5c9af6ff')
version('1.2.2.2', sha256='e80ea9619ac18f4bfe44812198b40b9ae5c0ddf3f9cc91778f9ccc82168d1372')
diff --git a/var/spack/repos/builtin/packages/r-nmf/package.py b/var/spack/repos/builtin/packages/r-nmf/package.py
index 690113f092..8290a8ac7a 100644
--- a/var/spack/repos/builtin/packages/r-nmf/package.py
+++ b/var/spack/repos/builtin/packages/r-nmf/package.py
@@ -18,6 +18,7 @@ class RNmf(RPackage):
cran = "NMF"
+ version('0.24.0', sha256='481811d35b3bbc07e9a60e2f853b05ef26581b43be9c6c4bab81151b8dcadd93')
version('0.23.0', sha256='0f0cca01b37bf46fce90d2e951df609d3d377908aa607825083fd0c47cc24753')
version('0.21.0', sha256='3b30c81c66066fab4a63c5611a0313418b840d8b63414db31ef0e932872d02e3')
diff --git a/var/spack/repos/builtin/packages/r-nmof/package.py b/var/spack/repos/builtin/packages/r-nmof/package.py
index 4281319ac9..c81489d659 100644
--- a/var/spack/repos/builtin/packages/r-nmof/package.py
+++ b/var/spack/repos/builtin/packages/r-nmof/package.py
@@ -19,6 +19,7 @@ class RNmof(RPackage):
cran = "NMOF"
+ version('2.5-1', sha256='0468ba72364cbdf90781824dfb1a60324203e2248d93cb6f1ffd6eb0d271f390')
version('2.5-0', sha256='f44914c86d86c62f74cbc026179a694f0b3c2e3341b076acaf5de01de194a3c7')
version('2.2-2', sha256='e64472f89023f0d779a35df753747d750174ce89644a9142312a1d2dc6f24642')
version('1.6-0', sha256='5484cd43c28aaf23d560c2dde8bcd8dd440a205d2214eb50e02fe0bb42ec2755')
diff --git a/var/spack/repos/builtin/packages/r-openssl/package.py b/var/spack/repos/builtin/packages/r-openssl/package.py
index b2c8f69434..6288f42a72 100644
--- a/var/spack/repos/builtin/packages/r-openssl/package.py
+++ b/var/spack/repos/builtin/packages/r-openssl/package.py
@@ -22,6 +22,7 @@ class ROpenssl(RPackage):
cran = "openssl"
+ version('2.0.2', sha256='862d3dc9bb69d92e36e83a7506be83443d4a4957f5f08f6617d7873c67a1f1c4')
version('1.4.6', sha256='43b832af70e71770168b997107c52c8f406f8c33e9ef9b289610bccea2f34359')
version('1.4.5', sha256='4fc141aba8e94e9f5ecce6eda07e45a5e7048d8609ba909ede4f7f4933e0c1f7')
version('1.4.3', sha256='342001df8ecff5df2cdf757f123d35ea4b449751045f708b91f27c1be0d48269')
@@ -33,6 +34,7 @@ class ROpenssl(RPackage):
depends_on('r-askpass', type=('build', 'run'), when='@1.2:')
depends_on('openssl@1.0.1:')
+ depends_on('openssl@1.0.2:', when='@2.0.2:')
def flag_handler(self, name, flags):
if name == 'cflags':
diff --git a/var/spack/repos/builtin/packages/r-optimx/package.py b/var/spack/repos/builtin/packages/r-optimx/package.py
index b6fb27d387..6333144c47 100644
--- a/var/spack/repos/builtin/packages/r-optimx/package.py
+++ b/var/spack/repos/builtin/packages/r-optimx/package.py
@@ -20,6 +20,7 @@ class ROptimx(RPackage):
cran = "optimx"
+ version('2022-4.30', sha256='ebe9887a22296cf4b2db07981aaa1f898bf7c17fb61a4b398c228d4077d0b410')
version('2021-10.12', sha256='39384c856b5efa3992cd230548b60eff936d428111ad6ad5b8fb98a3bcbb7943')
version('2020-4.2', sha256='6381c25c322287fc98ab1b2965d3f68c9a92c587c76aca1d33fd6428b2167101')
diff --git a/var/spack/repos/builtin/packages/r-packrat/package.py b/var/spack/repos/builtin/packages/r-packrat/package.py
index 5ad2550bb9..16e6261025 100644
--- a/var/spack/repos/builtin/packages/r-packrat/package.py
+++ b/var/spack/repos/builtin/packages/r-packrat/package.py
@@ -15,6 +15,7 @@ class RPackrat(RPackage):
cran = "packrat"
+ version('0.8.0', sha256='3025b9052974bec00fb09299226b80004d48e611e15a65e5a0bc49d3538844ef')
version('0.7.0', sha256='e8bce1fd78f28f3a7bf56e65a2ae2c6802e69bf55466c24e1d1a4b8a5f83dcc2')
version('0.5.0', sha256='d6a09290fbe037a6c740921c5dcd70b500e5b36e4713eae4010adf0c456bc5f7')
version('0.4.9-3', sha256='87299938a751defc54eb00a029aecd3522d6349d900aaa8b3e1aa6bf31e98234')
diff --git a/var/spack/repos/builtin/packages/r-paleotree/package.py b/var/spack/repos/builtin/packages/r-paleotree/package.py
index c4ac697b08..ffc7334975 100644
--- a/var/spack/repos/builtin/packages/r-paleotree/package.py
+++ b/var/spack/repos/builtin/packages/r-paleotree/package.py
@@ -15,13 +15,16 @@ class RPaleotree(RPackage):
cran = "paleotree"
+ version('3.4.4', sha256='8809c3395e6904669db8c7cc3b54dd5c3c76948c8568d310cf02e4a5dbc678e4')
version('3.3.25', sha256='aa64b9120075581229439227a12db776d052b03eb5f9721692a16a9402ac8712')
version('3.3.0', sha256='f8f6b0228dd5290b251cad3a8626689442b5aa793d8f072c8c2c7813a063df90')
version('3.1.3', sha256='4c1cc8a5e171cbbbd88f78914f86d5e6d144ae573816fbeeff2ab54a814ec614')
depends_on('r@3.0.0:', type=('build', 'run'))
+ depends_on('r@4.1.0:', type=('build', 'run'), when='@3.4.4:')
depends_on('r-ape@4.1:', type=('build', 'run'))
depends_on('r-phangorn@2.0.0:', type=('build', 'run'))
+ depends_on('r-phangorn@2.6.3:', type=('build', 'run'), when='@3.4.4:')
depends_on('r-phytools@0.6-00:', type=('build', 'run'))
depends_on('r-jsonlite', type=('build', 'run'), when='@3.3.0:')
depends_on('r-png', type=('build', 'run'), when='@3.3.0:')
diff --git a/var/spack/repos/builtin/packages/r-parallelly/package.py b/var/spack/repos/builtin/packages/r-parallelly/package.py
index 3d8aa3ad82..10acfa4c44 100644
--- a/var/spack/repos/builtin/packages/r-parallelly/package.py
+++ b/var/spack/repos/builtin/packages/r-parallelly/package.py
@@ -22,6 +22,7 @@ class RParallelly(RPackage):
cran = "parallelly"
+ version('1.31.1', sha256='40c7fc3d842fa928448e574091a521bead2367bf97545c744ca78ea9af3117da')
version('1.30.0', sha256='aab080cb709bab232b2d808053efb2391eeb30a2de9497cbe474c99df89f9f3b')
version('1.28.1', sha256='f4ae883b18409adb83c561ed69427e740e1b50bf85ef57f48c3f2edf837cc663')
version('1.23.0', sha256='376ce2381587380a4da60f9563710d63084a605f93aa364e9349f2523e83bc08')
diff --git a/var/spack/repos/builtin/packages/r-party/package.py b/var/spack/repos/builtin/packages/r-party/package.py
index b6e6231390..baa9767474 100644
--- a/var/spack/repos/builtin/packages/r-party/package.py
+++ b/var/spack/repos/builtin/packages/r-party/package.py
@@ -28,6 +28,7 @@ class RParty(RPackage):
cran = "party"
+ version('1.3-10', sha256='e5892955f6ce662ade568e646d1d672c3ecbf5d4e74b4a887a353e6160f7b56a')
version('1.3-9', sha256='29a1fefdb86369285ebf5d48ab51268a83e2011fb9d9f609a2250b5f0b169089')
version('1.3-5', sha256='1c3a35d3fe56498361542b3782de2326561c14a8fa1b76f3c9f13beb1fd51364')
version('1.3-3', sha256='9f72eea02d43a4cee105790ae7185b0478deb6011ab049cc9d31a0df3abf7ce9')
diff --git a/var/spack/repos/builtin/packages/r-pbdzmq/package.py b/var/spack/repos/builtin/packages/r-pbdzmq/package.py
index a0c6d019b3..3c73d7a2a0 100644
--- a/var/spack/repos/builtin/packages/r-pbdzmq/package.py
+++ b/var/spack/repos/builtin/packages/r-pbdzmq/package.py
@@ -20,6 +20,7 @@ class RPbdzmq(RPackage):
cran = "pbdZMQ"
+ version('0.3-7', sha256='df2d2be14b2f57a64d76cdda4c01fd1c3d9aa12221c63524c01c71849df11808')
version('0.3-6', sha256='9944c8c44221aed1dbd7763ad9ec52c0ad2611d37bee25971ca16f02e8e8c37b')
version('0.3-4', sha256='07794bd6858e093f8b6b879ddd5ab0195449b47a41b70cab2f60603f0a53b129')
version('0.3-3', sha256='ae26c13400e2acfb6463ff9b67156847a22ec79f3b53baf65119efaba1636eca')
diff --git a/var/spack/repos/builtin/packages/r-pcapp/package.py b/var/spack/repos/builtin/packages/r-pcapp/package.py
index 2f3a8de0e7..7882a291a8 100644
--- a/var/spack/repos/builtin/packages/r-pcapp/package.py
+++ b/var/spack/repos/builtin/packages/r-pcapp/package.py
@@ -16,6 +16,7 @@ class RPcapp(RPackage):
cran = "pcaPP"
+ version('2.0-1', sha256='9690e2f263162452d5a14bd8c52264cb70b317d30907411af4e5b6df4086121a')
version('1.9-74', sha256='50837b434d67e4b5fcec34c689a9e30c7a9fb94c561b39f24e68a1456ff999b6')
version('1.9-73', sha256='ca4566b0babfbe83ef9418283b08a12b3420dc362f93c6562f265df7926b53fc')
version('1.9-72.1', sha256='a9e39ee15a650930c07672092f9f0c431807869b68b5471037eb7290a4d65bd5')
diff --git a/var/spack/repos/builtin/packages/r-phytools/package.py b/var/spack/repos/builtin/packages/r-phytools/package.py
index 57d9cffdcf..ebd2891769 100644
--- a/var/spack/repos/builtin/packages/r-phytools/package.py
+++ b/var/spack/repos/builtin/packages/r-phytools/package.py
@@ -30,6 +30,7 @@ class RPhytools(RPackage):
cran = "phytools"
+ version('1.0-3', sha256='bfe2aec6aae8235264c1494eee42be494fed81a676c6de9e39c57a6e3682b37d')
version('1.0-1', sha256='b7bf5d35ec4205115112481f6761de3e276e6b086a3e5249621ad63aa23a1ac8')
version('0.7-70', sha256='e3432c3b006e5cc6f1292bebd81ebc20044edf1f56c3d27a3497f738eb99f0d3')
version('0.6-99', sha256='2ef532cba77c5f73803bd34582bef05709705311a0b50e42316e69944567390f')
diff --git a/var/spack/repos/builtin/packages/r-pkgcache/package.py b/var/spack/repos/builtin/packages/r-pkgcache/package.py
index 5d8ef95309..843d87794e 100644
--- a/var/spack/repos/builtin/packages/r-pkgcache/package.py
+++ b/var/spack/repos/builtin/packages/r-pkgcache/package.py
@@ -15,14 +15,14 @@ class RPkgcache(RPackage):
cran = "pkgcache"
+ version('2.0.1', sha256='1add648c6f30543cbd5e43369c4d1462248d4caaedfcb588ee7b946a75d42f4f')
version('1.3.0', sha256='bd5f460a3bee9fc1298cf9f747bc59a6b9fbed90e92454bc6ea6bf82c15b9471')
depends_on('r@3.1:', type=('build', 'run'))
- depends_on('r-assertthat', type=('build', 'run'))
depends_on('r-callr@2.0.4.9000:', type=('build', 'run'))
depends_on('r-cli@2.0.0:', type=('build', 'run'))
+ depends_on('r-cli@3.2.0:', type=('build', 'run'), when='@2.0.1:')
depends_on('r-curl@3.2:', type=('build', 'run'))
- depends_on('r-digest', type=('build', 'run'))
depends_on('r-filelock', type=('build', 'run'))
depends_on('r-glue', type=('build', 'run'))
depends_on('r-jsonlite', type=('build', 'run'))
@@ -30,6 +30,9 @@ class RPkgcache(RPackage):
depends_on('r-r6', type=('build', 'run'))
depends_on('r-processx@3.3.0.9001:', type=('build', 'run'))
depends_on('r-rappdirs', type=('build', 'run'))
- depends_on('r-rlang', type=('build', 'run'))
- depends_on('r-tibble', type=('build', 'run'))
- depends_on('r-uuid', type=('build', 'run'))
+
+ depends_on('r-assertthat', type=('build', 'run'), when='@:1.3.0')
+ depends_on('r-digest', type=('build', 'run'), when='@:1.3.0')
+ depends_on('r-rlang', type=('build', 'run'), when='@:1.3.0')
+ depends_on('r-tibble', type=('build', 'run'), when='@:1.3.0')
+ depends_on('r-uuid', type=('build', 'run'), when='@:1.3.0')
diff --git a/var/spack/repos/builtin/packages/r-pkgdepends/package.py b/var/spack/repos/builtin/packages/r-pkgdepends/package.py
index 63469914ac..581f20f67b 100644
--- a/var/spack/repos/builtin/packages/r-pkgdepends/package.py
+++ b/var/spack/repos/builtin/packages/r-pkgdepends/package.py
@@ -20,8 +20,10 @@ class RPkgdepends(RPackage):
cran = "pkgdepends"
+ version('0.3.1', sha256='8e4263a1792871ee9629b0d6a8caeb53b77012db3b5be91b432f3553cd2a80be')
version('0.2.0', sha256='59afdbe0e59663088ba4facac5cd011a0a05b0b9c540103fb8b9f0a673bf4d94')
+ depends_on('r@3.4:', type=('build', 'run'), when='@0.3.1:')
depends_on('r-callr@3.3.1:', type=('build', 'run'))
depends_on('r-cli@2.1.0:', type=('build', 'run'))
depends_on('r-crayon', type=('build', 'run'))
@@ -33,12 +35,14 @@ class RPkgdepends(RPackage):
depends_on('r-lpsolve', type=('build', 'run'))
depends_on('r-pkgbuild@1.0.2:', type=('build', 'run'))
depends_on('r-pkgcache@1.3.0:', type=('build', 'run'))
+ depends_on('r-pkgcache@2.0.0:', type=('build', 'run'), when='@0.3.1:')
depends_on('r-prettyunits@1.1.1:', type=('build', 'run'))
depends_on('r-processx@3.4.2:', type=('build', 'run'))
depends_on('r-ps', type=('build', 'run'))
- depends_on('r-rematch2', type=('build', 'run'))
- depends_on('r-rprojroot', type=('build', 'run'))
depends_on('r-r6', type=('build', 'run'))
- depends_on('r-tibble', type=('build', 'run'))
+ depends_on('r-rprojroot', type=('build', 'run'))
depends_on('r-withr@2.1.1:', type=('build', 'run'))
depends_on('r-zip@2.1.0:', type=('build', 'run'))
+
+ depends_on('r-rematch2', type=('build', 'run'), when='@:0.2.0')
+ depends_on('r-tibble', type=('build', 'run'), when='@:0.2.0')
diff --git a/var/spack/repos/builtin/packages/r-plotmo/package.py b/var/spack/repos/builtin/packages/r-plotmo/package.py
index 80dcc8746e..d08581f4cd 100644
--- a/var/spack/repos/builtin/packages/r-plotmo/package.py
+++ b/var/spack/repos/builtin/packages/r-plotmo/package.py
@@ -15,6 +15,7 @@ class RPlotmo(RPackage):
cran = "plotmo"
+ version('3.6.2', sha256='cde33a8ec558b12d8e11d7d0531e73f6678a25ee589b79897d2fc425a3fd353c')
version('3.6.1', sha256='245a0c87f0cca08746c6fdc60da2e3856cd69b1a2b7b5641293c620d4ae04343')
version('3.6.0', sha256='c05afcc442f9542868beea5c3c40fb93b049f9b61c42725b2a1e2bc750c241e3')
version('3.5.6', sha256='78f08dc897136d21fa8ade2acb6290351b569d29eb0592c7074c0be3cf2aa594')
diff --git a/var/spack/repos/builtin/packages/r-plyr/package.py b/var/spack/repos/builtin/packages/r-plyr/package.py
index ffeefefac9..7f36f4a80b 100644
--- a/var/spack/repos/builtin/packages/r-plyr/package.py
+++ b/var/spack/repos/builtin/packages/r-plyr/package.py
@@ -19,6 +19,7 @@ class RPlyr(RPackage):
cran = "plyr"
+ version('1.8.7', sha256='7d9fdaf1157035a49c3661da3bbaa7bfcf782aafe1b98f7b5a68b0520046e87f')
version('1.8.6', sha256='ea55d26f155443e9774769531daa5d4c20a0697bb53abd832e891b126c935287')
version('1.8.4', sha256='60b522d75961007658c9806f8394db27989f1154727cb0bb970062c96ec9eac5')
diff --git a/var/spack/repos/builtin/packages/r-pmcmrplus/package.py b/var/spack/repos/builtin/packages/r-pmcmrplus/package.py
index 1e002d4a0d..421b263594 100644
--- a/var/spack/repos/builtin/packages/r-pmcmrplus/package.py
+++ b/var/spack/repos/builtin/packages/r-pmcmrplus/package.py
@@ -36,6 +36,7 @@ class RPmcmrplus(RPackage):
cran = "PMCMRplus"
+ version('1.9.4', sha256='1ec36674bb6d2fac3a1b0889c4672e40849c7e3565ffb34bb73b61f973bba19a')
version('1.9.3', sha256='76baba60f57343fa5bb6f6d2ea27aab77178e02b0d2f9d5d74abde7d18994f03')
depends_on('r@3.5.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-polspline/package.py b/var/spack/repos/builtin/packages/r-polspline/package.py
index 5bcb850e19..de8f255bc9 100644
--- a/var/spack/repos/builtin/packages/r-polspline/package.py
+++ b/var/spack/repos/builtin/packages/r-polspline/package.py
@@ -15,6 +15,7 @@ class RPolspline(RPackage):
cran = "polspline"
+ version('1.1.20', sha256='6992484e9e41036debef1e705e26959f8f5c7a68d3e1fda58273d2a72297a1b5')
version('1.1.19', sha256='953e3c4d007c3ef86ac2af3c71b272a99e8e35b194bdd58575785558c6711f66')
version('1.1.18', sha256='df250ee144bfff154249ba50308f46863107ef3efb2333ad908e599ed0eb0102')
version('1.1.17', sha256='d67b269d01105d4a6ea774737e921e66e065a859d1931ae38a70f88b6fb7ee30')
diff --git a/var/spack/repos/builtin/packages/r-polynom/package.py b/var/spack/repos/builtin/packages/r-polynom/package.py
index 1473f9b216..d7edcd31b4 100644
--- a/var/spack/repos/builtin/packages/r-polynom/package.py
+++ b/var/spack/repos/builtin/packages/r-polynom/package.py
@@ -12,4 +12,5 @@ class RPolynom(RPackage):
cran = "polynom"
+ version('1.4-1', sha256='bc1edb7bb16c8b299103f80a52ab8c5fc200cd07a9056578c1f672e9f5019278')
version('1.4-0', sha256='c5b788b26f7118a18d5d8e7ba93a0abf3efa6603fa48603c70ed63c038d3d4dd')
diff --git a/var/spack/repos/builtin/packages/r-posterior/package.py b/var/spack/repos/builtin/packages/r-posterior/package.py
index 22cfebc642..54110bfae8 100644
--- a/var/spack/repos/builtin/packages/r-posterior/package.py
+++ b/var/spack/repos/builtin/packages/r-posterior/package.py
@@ -21,6 +21,7 @@ class RPosterior(RPackage):
cran = "posterior"
+ version('1.2.1', sha256='b757e06885a1f21e7ad8f5a3feaecbe0a71ae8d766e4aec4c3aa2183a810afe1')
version('1.2.0', sha256='2ba01711a98448acc939cf506d22e8ee4cf680cdcea873226671fa8ae6934386')
version('1.1.0', sha256='eff6262dbcc1bf18337f535b0c75ba2fe360322e8b170c466e24ed3ee76cf4d2')
diff --git a/var/spack/repos/builtin/packages/r-pracma/package.py b/var/spack/repos/builtin/packages/r-pracma/package.py
index d687257091..db2b720765 100644
--- a/var/spack/repos/builtin/packages/r-pracma/package.py
+++ b/var/spack/repos/builtin/packages/r-pracma/package.py
@@ -16,6 +16,7 @@ class RPracma(RPackage):
cran = "pracma"
+ version('2.3.8', sha256='2302d454406e72711714732658d0c59c9d5a1ead698f22ee23f38cba63d42764')
version('2.3.6', sha256='17ac83fd48c9155e00dc3f0433f95723505dc73d046860afd9001866d699b8de')
version('2.2.9', sha256='0cea0ff5e88643df121e07b9aebfe57084c61e11801680039752f371fe87bf1e')
diff --git a/var/spack/repos/builtin/packages/r-processx/package.py b/var/spack/repos/builtin/packages/r-processx/package.py
index 2d1b18ab38..4e9d9da049 100644
--- a/var/spack/repos/builtin/packages/r-processx/package.py
+++ b/var/spack/repos/builtin/packages/r-processx/package.py
@@ -18,6 +18,7 @@ class RProcessx(RPackage):
cran = "processx"
+ version('3.5.3', sha256='679629fa56ec185d4fd52ade5b699c78a2a0e875acdf57555b31bc62111f342a')
version('3.5.2', sha256='ed6f2d1047461c6061e6ed58fb6de65a289b56009867892abad76c6bba46fc2b')
version('3.4.5', sha256='e368103aa6a6894bfa8e78b12a25598464bcd2c19a8b6334f24ee397db13bb14')
version('3.4.1', sha256='f1abddb48fa78f2b176552e2ec5d808d4d87d79ce72e9b3d25c9a7d715bbd1bc')
@@ -28,6 +29,7 @@ class RProcessx(RPackage):
version('2.0.0.1', sha256='8f61b2952d0f2d13c74465bfba174ce11eee559475c2f7b9be6bcb9e2e1d827b')
version('2.0.0', sha256='8325b56a60a276909228756281523cda9256bc754c5f3ca03b41c5c17cc398ad')
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@3.5.3:')
depends_on('r-ps@1.2.0:', type=('build', 'run'), when='@3.2.0:')
depends_on('r-r6', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-progressr/package.py b/var/spack/repos/builtin/packages/r-progressr/package.py
index 0e7b3f000a..4ef2fb28af 100644
--- a/var/spack/repos/builtin/packages/r-progressr/package.py
+++ b/var/spack/repos/builtin/packages/r-progressr/package.py
@@ -29,6 +29,7 @@ class RProgressr(RPackage):
cran = "progressr"
+ version('0.10.1', sha256='8f83024b2a6f52996750d45bf6698c2b438fb1062985f1df936ba3af313caed1')
version('0.10.0', sha256='4c95dc11c50c792440fa17f4538d59f1f3012bf6ef462a5a141609f87319badc')
depends_on('r@3.5.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-projpred/package.py b/var/spack/repos/builtin/packages/r-projpred/package.py
index 13722be2a3..dca6ff8b4d 100644
--- a/var/spack/repos/builtin/packages/r-projpred/package.py
+++ b/var/spack/repos/builtin/packages/r-projpred/package.py
@@ -19,6 +19,7 @@ class RProjpred(RPackage):
cran = "projpred"
+ version('2.1.2', sha256='a88a651e533c118aad0e8c2c905cfcf688d9c419ed195896036b8f6667b5cfb0')
version('2.0.2', sha256='af0a9fb53f706090fe81b6381b27b0b6bd3f7ae1e1e44b0ada6f40972b09a55b')
depends_on('r@3.5.0:', type=('build', 'run'))
@@ -26,13 +27,16 @@ class RProjpred(RPackage):
depends_on('r-loo@2.0.0:', type=('build', 'run'))
depends_on('r-rstantools@2.0.0:', type=('build', 'run'))
depends_on('r-lme4', type=('build', 'run'))
- depends_on('r-optimx', type=('build', 'run'))
+ depends_on('r-mvtnorm', type=('build', 'run'), when='@2.1.2:')
depends_on('r-ggplot2', type=('build', 'run'))
depends_on('r-rcpp', type=('build', 'run'))
- depends_on('r-rngtools@1.2.4:', type=('build', 'run'))
- depends_on('r-tidyverse', type=('build', 'run'))
- depends_on('r-mass', type=('build', 'run'))
depends_on('r-magrittr', type=('build', 'run'))
depends_on('r-mgcv', type=('build', 'run'))
depends_on('r-gamm4', type=('build', 'run'))
+ depends_on('r-rlang', type=('build', 'run'), when='@2.1.2:')
depends_on('r-rcpparmadillo', type=('build', 'run'))
+
+ depends_on('r-optimx', type=('build', 'run'), when='@:2.0.2')
+ depends_on('r-rngtools@1.2.4:', type=('build', 'run'), when='@:2.0.2')
+ depends_on('r-tidyverse', type=('build', 'run'), when='@:2.0.2')
+ depends_on('r-mass', type=('build', 'run'), when='@:2.0.2')
diff --git a/var/spack/repos/builtin/packages/r-ps/package.py b/var/spack/repos/builtin/packages/r-ps/package.py
index d1868c346c..e90ea44874 100644
--- a/var/spack/repos/builtin/packages/r-ps/package.py
+++ b/var/spack/repos/builtin/packages/r-ps/package.py
@@ -14,6 +14,7 @@ class RPs(RPackage):
cran = "ps"
+ version('1.7.0', sha256='8220cf32c6a12c908b6b7669f96b57445d3147a1aa484b9b5209e0f3fd4b52e1')
version('1.6.0', sha256='89ad7ddc5e0818bccacfd0673ddf2da0892ac2a3b4d3a821e40884ab1e96bf31')
version('1.5.0', sha256='7461a196f55557feda569a9791ad851c884f9a2dd71671655ed17cb048fafe96')
version('1.3.0', sha256='289193d0ccd2db0b6fe8702e8c5711e935219b17f90f01a6e9684982413e98d1')
@@ -22,3 +23,4 @@ class RPs(RPackage):
version('1.0.0', sha256='9bdaf64aaa44ae11866868402eb75bf56c2e3022100476d9b9dcd16ca784ffd8')
depends_on('r@3.1:', type=('build', 'run'))
+ depends_on('r@3.4:', type=('build', 'run'), when='@1.7.0:')
diff --git a/var/spack/repos/builtin/packages/r-pspline/package.py b/var/spack/repos/builtin/packages/r-pspline/package.py
index ffcffe920a..3d7fae8385 100644
--- a/var/spack/repos/builtin/packages/r-pspline/package.py
+++ b/var/spack/repos/builtin/packages/r-pspline/package.py
@@ -13,6 +13,7 @@ class RPspline(RPackage):
cran = "pspline"
+ version('1.0-19', sha256='ba55bf193f1df9785a0e13b7ef727d5fd2415b318cd6a26b48a2db490c4dfe40')
version('1.0-18', sha256='f71cf293bd5462e510ac5ad16c4a96eda18891a0bfa6447dd881c65845e19ac7')
depends_on('r@2.0.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-psych/package.py b/var/spack/repos/builtin/packages/r-psych/package.py
index 327f75c3c5..2d78016968 100644
--- a/var/spack/repos/builtin/packages/r-psych/package.py
+++ b/var/spack/repos/builtin/packages/r-psych/package.py
@@ -27,6 +27,7 @@ class RPsych(RPackage):
cran = "psych"
+ version('2.2.5', sha256='dcc3f9b30ed44dfd1de0366295a308e0b52959eb7ac9cb3bc3f32dc5b15fc321')
version('2.1.9', sha256='1475e03a17f1ae6837834f01c2472aed68887c89d90a84a3e09a532ce218500c')
version('2.0.12', sha256='8a71d4a1d8bc8c96703f9b4515cfb497e1947c6e017cb08270a7cfb36ce1ad4c')
version('1.8.12', sha256='6e175e049bc1ee5b79a9e51ccafb22b962b4e6c839ce5c9cfa1ad83967037743')
diff --git a/var/spack/repos/builtin/packages/r-qqconf/package.py b/var/spack/repos/builtin/packages/r-qqconf/package.py
new file mode 100644
index 0000000000..8ff6702c1a
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-qqconf/package.py
@@ -0,0 +1,27 @@
+# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class RQqconf(RPackage):
+ """Creates Simultaneous Testing Bands for QQ-Plots.
+
+ Provides functionality for creating Quantile-Quantile (QQ) and
+ Probability-Probability (PP) plots with simultaneous testing bands to asses
+ significance of sample deviation from a reference distribution."""
+
+ cran = "qqconf"
+
+ version('1.2.3', sha256='9b5b6042ea8e52e6e049807c0b5e3bfd534b624bd257be769de69cf505fece62')
+
+ depends_on('r@3.0.0:', type=('build', 'run'))
+ depends_on('r-dplyr@1.0.0:', type=('build', 'run'))
+ depends_on('r-magrittr@1.5:', type=('build', 'run'))
+ depends_on('r-rlang@0.4.9:', type=('build', 'run'))
+ depends_on('r-mass@7.3-50:', type=('build', 'run'))
+ depends_on('r-robustbase@0.93-4:', type=('build', 'run'))
+ depends_on('r-rcpp', type=('build', 'run'))
+ depends_on('fftw@3.1.2:')
diff --git a/var/spack/repos/builtin/packages/r-qs/package.py b/var/spack/repos/builtin/packages/r-qs/package.py
index ecf48b888c..1b84c8d870 100644
--- a/var/spack/repos/builtin/packages/r-qs/package.py
+++ b/var/spack/repos/builtin/packages/r-qs/package.py
@@ -16,6 +16,7 @@ class RQs(RPackage):
maintainers = ['dorton21']
+ version('0.25.3', sha256='51adf6a112c19f78ceeefa55acf800c7e6bf2664e7d9cea9d932abb24f22be6b')
version('0.25.2', sha256='fe428ae5dc46f88fdf454ca74c4a073f5ac288d6d039080a3c0d66c4ebbd5cbf')
version('0.23.6', sha256='c6e958e9741ee981bf2388c91b8f181718ffb0f32283cd7ebcd2d054817280e4')
diff --git a/var/spack/repos/builtin/packages/r-quantmod/package.py b/var/spack/repos/builtin/packages/r-quantmod/package.py
index b0fbae1970..1c146a6e50 100644
--- a/var/spack/repos/builtin/packages/r-quantmod/package.py
+++ b/var/spack/repos/builtin/packages/r-quantmod/package.py
@@ -14,6 +14,7 @@ class RQuantmod(RPackage):
cran = "quantmod"
+ version('0.4.20', sha256='f757df41595d885f7927e18f4835bc233d78d2d3ae48fd11c8874d4338c48e94')
version('0.4.18', sha256='aa40448e93a1facf399213ac691784007731e869ad243fe762381ab099cd6c35')
version('0.4-15', sha256='7ef2e798d4d8e4d2af0a5b2b9fecebec30568087afbd24bfd923cdeb8b53df53')
version('0.4-14', sha256='d95b1acf73328d675bbad18a93fa3c40faf58959e0401458ad21cf6b9f9254b3')
diff --git a/var/spack/repos/builtin/packages/r-quantreg/package.py b/var/spack/repos/builtin/packages/r-quantreg/package.py
index b832d28766..fa01dcd536 100644
--- a/var/spack/repos/builtin/packages/r-quantreg/package.py
+++ b/var/spack/repos/builtin/packages/r-quantreg/package.py
@@ -19,6 +19,7 @@ class RQuantreg(RPackage):
cran = "quantreg"
+ version('5.93', sha256='d4a94984a500bf4c92dec21013441f001a4aa0541c4c651384e257a4b4e9e539')
version('5.88', sha256='1940e553711ed50655b2692ba29432d1083ed83c2db06e31a031ce8f82823a3f')
version('5.87', sha256='9ad7ef09e5f53b89ef09dea3a1aa25cfda9f3f2528994f874ec1cd9ca7fda38e')
version('5.86', sha256='71d1c829af7574ca00575cc0375376ac3ecd54b3d6d36e8eecd71ed8acb9d605')
@@ -30,8 +31,11 @@ class RQuantreg(RPackage):
version('5.26', sha256='9d7403f7c5ee219ec155838648401a1c4915a46a74f5774a0f6876c537ef2c87')
depends_on('r@2.6:', type=('build', 'run'))
+ depends_on('r@3.5:', type=('build', 'run'), when='@5.93:')
depends_on('r-sparsem', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-matrixmodels', type=('build', 'run'))
+ depends_on('r-survival', type=('build', 'run'), when='@5.93:')
+ depends_on('r-mass', type=('build', 'run'), when='@5.93:')
depends_on('r-conquer', type=('build', 'run'), when='@5.82:5.86')
diff --git a/var/spack/repos/builtin/packages/r-randomfieldsutils/package.py b/var/spack/repos/builtin/packages/r-randomfieldsutils/package.py
index 88cc2230be..2163006306 100644
--- a/var/spack/repos/builtin/packages/r-randomfieldsutils/package.py
+++ b/var/spack/repos/builtin/packages/r-randomfieldsutils/package.py
@@ -16,6 +16,7 @@ class RRandomfieldsutils(RPackage):
cran = "RandomFieldsUtils"
+ version('1.2.5', sha256='8cc288ba0f234eedb20ac791c89e18bde15e1f690ce34a303ff91a45d7f84e2e')
version('1.1.0', sha256='f472602fed449a505a2e5787ab8a6c8c1b764335980adaeeb7b1f24069124a9d')
version('0.5.6', sha256='07f484443dffab53fb530e56f1e36e7a59e77768638555975587b6a1e619480b')
version('0.5.3', sha256='ea823cba2e254a9f534efb4b772c0aeef2039ee9ef99744e077b969a87f8031d')
diff --git a/var/spack/repos/builtin/packages/r-randomforest/package.py b/var/spack/repos/builtin/packages/r-randomforest/package.py
index b0028abdbe..09f4eb8da2 100644
--- a/var/spack/repos/builtin/packages/r-randomforest/package.py
+++ b/var/spack/repos/builtin/packages/r-randomforest/package.py
@@ -14,8 +14,10 @@ class RRandomforest(RPackage):
cran = "randomForest"
+ version('4.7-1.1', sha256='f59ea87534480edbcd6baf53d7ec57e8c69f4532c2d2528eacfd48924efa2cd6')
version('4.6-14', sha256='f4b88920419eb0a89d0bc5744af0416d92d112988702dc726882394128a8754d')
version('4.6-12', sha256='6e512f8f88a51c01a918360acba61f1f39432f6e690bc231b7864218558b83c4')
depends_on('r@2.5.0:', type=('build', 'run'))
depends_on('r@3.2.2:', type=('build', 'run'), when='@4.6-14:')
+ depends_on('r@4.1.0:', type=('build', 'run'), when='@4.7-1.1:')
diff --git a/var/spack/repos/builtin/packages/r-randomglm/package.py b/var/spack/repos/builtin/packages/r-randomglm/package.py
index faba5ad7ef..4316720296 100644
--- a/var/spack/repos/builtin/packages/r-randomglm/package.py
+++ b/var/spack/repos/builtin/packages/r-randomglm/package.py
@@ -14,9 +14,15 @@ class RRandomglm(RPackage):
cran = "randomGLM"
+ version('1.10-1', sha256='df324edf0c69926da1a3991dff10714ca4ec7a271d091a0a09d2a6a1d86da714')
version('1.02-1', sha256='3bf7c1dbdacc68125f8ae3014b9bc546dd3328d04ad015d154781bdf3f1a230c')
depends_on('r@2.14.0:', type=('build', 'run'))
+ depends_on('r@4.0.0:', type=('build', 'run'), when='@1.10-1:')
depends_on('r-mass', type=('build', 'run'))
depends_on('r-foreach', type=('build', 'run'))
depends_on('r-doparallel', type=('build', 'run'))
+ depends_on('r-hmisc', type=('build', 'run'), when='@1.10-1:')
+ depends_on('r-geometry', type=('build', 'run'), when='@1.10-1:')
+ depends_on('r-survival', type=('build', 'run'), when='@1.10-1:')
+ depends_on('r-matrixstats', type=('build', 'run'), when='@1.10-1:')
diff --git a/var/spack/repos/builtin/packages/r-rbibutils/package.py b/var/spack/repos/builtin/packages/r-rbibutils/package.py
index 327ab1017a..cb1db36b5d 100644
--- a/var/spack/repos/builtin/packages/r-rbibutils/package.py
+++ b/var/spack/repos/builtin/packages/r-rbibutils/package.py
@@ -16,6 +16,7 @@ class RRbibutils(RPackage):
cran = "rbibutils"
+ version('2.2.8', sha256='f1aecdeeba99042d34de19234238c5bbdc18a26f271f6adf9c9b7e349d50d152')
version('2.2.7', sha256='7c9e6719556b8caa9fb58743b717e89f45e8e7018371bf16f07dc3c1f96a55c5')
version('2.0', sha256='03d13abee321decb88bc4e7c9f27276d62a4a880fa72bb6b86be91885010cfed')
diff --git a/var/spack/repos/builtin/packages/r-rcolorbrewer/package.py b/var/spack/repos/builtin/packages/r-rcolorbrewer/package.py
index 3c560e1db9..fac3c6d1df 100644
--- a/var/spack/repos/builtin/packages/r-rcolorbrewer/package.py
+++ b/var/spack/repos/builtin/packages/r-rcolorbrewer/package.py
@@ -14,6 +14,7 @@ class RRcolorbrewer(RPackage):
cran = "RColorBrewer"
+ version('1.1-3', sha256='4f42f5423c45688b39f492c7892d93f37b4541831c8ffb140364d2bd89031ac0')
version('1.1-2', sha256='f3e9781e84e114b7a88eb099825936cc5ae7276bbba5af94d35adb1b3ea2ccdd')
depends_on('r@2.0.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rcpp/package.py b/var/spack/repos/builtin/packages/r-rcpp/package.py
index de29e7dfa0..9efc77cc51 100644
--- a/var/spack/repos/builtin/packages/r-rcpp/package.py
+++ b/var/spack/repos/builtin/packages/r-rcpp/package.py
@@ -23,6 +23,7 @@ class RRcpp(RPackage):
cran = "Rcpp"
+ version('1.0.8.3', sha256='9da5b84cdaf56e972b41e669d496b1ece2e91bcd435505c68b9f2bd98375f8bf')
version('1.0.8', sha256='879f9296bc045ac4ed464578723bd37fcabbbdaa30aaaf070cf953e329f678ee')
version('1.0.7', sha256='15e5a4732216daed16263c79fb37017c2ada84a2d4e785e3b76445d0eba3dc1d')
version('1.0.6', sha256='c9f24756bc000f7a989bd4f9aa93d57f7739dcde77946703f8bb32332a35f012')
diff --git a/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py b/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py
index 0c2ffe0b40..627d5438c6 100644
--- a/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py
+++ b/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py
@@ -23,6 +23,7 @@ class RRcpparmadillo(RPackage):
cran = "RcppArmadillo"
+ version('0.11.1.1.0', sha256='eb0bfc484c41543e766441b4c8c4a3061d8633540914ed2bbf363da047a74897')
version('0.10.8.1.0', sha256='efa415afb38514648456d1feab247c556735573673986a4fb0f512960b9af5f4')
version('0.10.7.5.0', sha256='7c061e6371c3c068d17744fd7f764dfd02f25393c3f5d534aa7d9e62ac912614')
version('0.10.7.3.0', sha256='3710b767708e3b9408723eedb98391daa8651fda53a2c6b033273265512f6262')
diff --git a/var/spack/repos/builtin/packages/r-rcppcnpy/package.py b/var/spack/repos/builtin/packages/r-rcppcnpy/package.py
index eed211776f..80dff10e65 100644
--- a/var/spack/repos/builtin/packages/r-rcppcnpy/package.py
+++ b/var/spack/repos/builtin/packages/r-rcppcnpy/package.py
@@ -18,6 +18,7 @@ class RRcppcnpy(RPackage):
cran = "RcppCNPy"
+ version('0.2.11', sha256='5dbb36f2526c276fd79b8e08a30503dc401cdf54d8c40f61af758c9ee1192f55')
version('0.2.10', sha256='77d6fbc86520a08da40d44c0b82767099f8f719ca95870d91efff1a9cab1ab9c')
version('0.2.9', sha256='733f004ad1a8b0e5aafbf547c4349d2df3118afd57f1ff99f20e39135c6edb30')
diff --git a/var/spack/repos/builtin/packages/r-rcppeigen/package.py b/var/spack/repos/builtin/packages/r-rcppeigen/package.py
index 10c169240f..7b7457fa31 100644
--- a/var/spack/repos/builtin/packages/r-rcppeigen/package.py
+++ b/var/spack/repos/builtin/packages/r-rcppeigen/package.py
@@ -25,6 +25,7 @@ class RRcppeigen(RPackage):
cran = "RcppEigen"
+ version('0.3.3.9.2', sha256='2547e794d5a6fb8d9fbadf19e64afa0bcf413cc69ecf3f428995fa5a0fced493')
version('0.3.3.9.1', sha256='8a0486249b778a4275a1168fc89fc7fc49c2bb031cb14b50a50089acae7fe962')
version('0.3.3.5.0', sha256='e5c6af17770c5f57b7cf2fba04ad1a519901b446e8138bfff221952458207f05')
version('0.3.3.4.0', sha256='11020c567b299b1eac95e8a4d57abf0315931286907823dc7b66c44d0dd6dad4')
diff --git a/var/spack/repos/builtin/packages/r-rcppgsl/package.py b/var/spack/repos/builtin/packages/r-rcppgsl/package.py
index b02a08120a..01ca0aa18d 100644
--- a/var/spack/repos/builtin/packages/r-rcppgsl/package.py
+++ b/var/spack/repos/builtin/packages/r-rcppgsl/package.py
@@ -24,6 +24,7 @@ class RRcppgsl(RPackage):
cran = "RcppGSL"
+ version('0.3.11', sha256='f094ea26c99b04d9e203986a1f2003f02472ceca0e2ef1c3beefd3ae80aeada8')
version('0.3.10', sha256='8612087da02fb791f427fed310c23d0482a8eb60fb089119f018878143f95451')
depends_on('r-rcpp@0.11.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rdpack/package.py b/var/spack/repos/builtin/packages/r-rdpack/package.py
index e802086b4b..20291b058b 100644
--- a/var/spack/repos/builtin/packages/r-rdpack/package.py
+++ b/var/spack/repos/builtin/packages/r-rdpack/package.py
@@ -19,6 +19,7 @@ class RRdpack(RPackage):
cran = "Rdpack"
+ version('2.3', sha256='c45e1ab8352b92ce03f26ece1f4db3716959fca2af9e826d5bd3c76b2151f7c5')
version('2.1.3', sha256='8381a8866b9acf5acb2c80069684339c3921f1b45fa202719e8f6852fb4d55b8')
version('2.1', sha256='26e094fe3c077fb2a99e95c5bd94015a5f993a4a5f5d217829b4872ff004bfce')
version('0.11-0', sha256='8fb449c80fbe931cdce51f728fb03a1978009ccce66fd6b9edacdc6ff4118d85')
diff --git a/var/spack/repos/builtin/packages/r-readxl/package.py b/var/spack/repos/builtin/packages/r-readxl/package.py
index 0dbdb1dbfc..a7994a658a 100644
--- a/var/spack/repos/builtin/packages/r-readxl/package.py
+++ b/var/spack/repos/builtin/packages/r-readxl/package.py
@@ -16,12 +16,17 @@ class RReadxl(RPackage):
cran = "readxl"
+ version('1.4.0', sha256='ab9239c249f79b649f7665a612b3dbf4b774ab633115e6dee41091a8cb2491f7')
version('1.3.1', sha256='24b441713e2f46a3e7c6813230ad6ea4d4ddf7e0816ad76614f33094fbaaaa96')
version('1.3.0', sha256='8379d1026dcfc662d073eb1c69ed1d90aa6439d6cb3c6fc1b5d1db4f51b3fadc')
version('1.1.0', sha256='b63d21fc6510acb373e96deaec45e966a523ec75cbec75a089529297ed443116')
version('1.0.0', sha256='fbd62f07fed7946363698a57be88f4ef3fa254ecf456ef292535849c787fc7ad')
- depends_on('r-tibble@1.3.1:', type=('build', 'run'))
- depends_on('r-rcpp@0.12.18:', type=('build', 'run'))
+ depends_on('r@3.4:', type=('build', 'run'), when='@1.4.0:')
depends_on('r-cellranger', type=('build', 'run'))
+ depends_on('r-tibble@1.3.1:', type=('build', 'run'))
+ depends_on('r-tibble@2.0.1:', type=('build', 'run'), when='@1.4.0:')
+ depends_on('r-cpp11@0.4.0:', type=('build', 'run'), when='@1.4.0:')
depends_on('r-progress', type=('build', 'run'), when='@1.2.0:')
+
+ depends_on('r-rcpp@0.12.18:', type=('build', 'run'), when='@:1.3.1')
diff --git a/var/spack/repos/builtin/packages/r-renv/package.py b/var/spack/repos/builtin/packages/r-renv/package.py
index 1b4e57b2ef..fec1fb8f07 100644
--- a/var/spack/repos/builtin/packages/r-renv/package.py
+++ b/var/spack/repos/builtin/packages/r-renv/package.py
@@ -17,6 +17,7 @@ class RRenv(RPackage):
cran = "renv"
+ version('0.15.5', sha256='b4f1a9a7daa82f0c3123ebd4eeba06e98d5485215518e5292b25bc56741d582e')
version('0.15.2', sha256='d07effd329f6d653fec9cb517bc8adf3cd6b711758e439055b6d2f06c88765db')
version('0.15.1', sha256='36e8c8df4af50f2341053aa567798dfca6852ade10fa70f9dc146fe9f96f9b5b')
version('0.13.2', sha256='41f208ed957e27c50cbd8b0fff77a434bad963707df85e462419e2edb6719a4a')
diff --git a/var/spack/repos/builtin/packages/r-reshape/package.py b/var/spack/repos/builtin/packages/r-reshape/package.py
index 9169b838dc..051a2f41bb 100644
--- a/var/spack/repos/builtin/packages/r-reshape/package.py
+++ b/var/spack/repos/builtin/packages/r-reshape/package.py
@@ -14,6 +14,7 @@ class RReshape(RPackage):
cran = "reshape"
+ version('0.8.9', sha256='791178b3b5f30c166ebf5910a5ab1c67b54e7023b10b6c2e2ddd1cc02a1e4048')
version('0.8.8', sha256='4d5597fde8511e8fe4e4d1fd7adfc7ab37ff41ac68c76a746f7487d7b106d168')
version('0.8.7', sha256='2fa6c87d1e89f182e51bc5a4fcda3d42d83b8fb4474ca525fa7a8db5081f3992')
diff --git a/var/spack/repos/builtin/packages/r-reticulate/package.py b/var/spack/repos/builtin/packages/r-reticulate/package.py
index 94aaca0360..d93bff7b71 100644
--- a/var/spack/repos/builtin/packages/r-reticulate/package.py
+++ b/var/spack/repos/builtin/packages/r-reticulate/package.py
@@ -17,6 +17,7 @@ class RReticulate(RPackage):
cran = "reticulate"
+ version('1.25', sha256='2125af9e75939c3b7c0dc74f28f42606e816d63aa1143baf631c318ff5ff3a2c')
version('1.24', sha256='b918c5204916601f757ad0fc629b2ae1eabab7cdf7f6aa2e219d26e506d916cc')
version('1.23', sha256='fea04a3ff33c71f1910d65000a93c6882180ca03f8657ee118ea9e79786c36d6')
version('1.18', sha256='b33f855a58f446eefbe38df8a1a4865390f5d4ebd64b2c72266baaee64628513')
diff --git a/var/spack/repos/builtin/packages/r-rfast/package.py b/var/spack/repos/builtin/packages/r-rfast/package.py
index 9888bdb2ff..08f0822fd1 100644
--- a/var/spack/repos/builtin/packages/r-rfast/package.py
+++ b/var/spack/repos/builtin/packages/r-rfast/package.py
@@ -21,6 +21,7 @@ class RRfast(RPackage):
cran = "Rfast"
+ version('2.0.6', sha256='34694b5c67ce8fcbdc90aac2ac80a74d4b66515f383e6301aea7c020009ebe7f')
version('2.0.4', sha256='959907e36e24620c07ec282b203b40214f4914f4928c07ee6491043c27af31d9')
depends_on('r@3.5.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rgdal/package.py b/var/spack/repos/builtin/packages/r-rgdal/package.py
index 72988b7423..f0cd01b31d 100644
--- a/var/spack/repos/builtin/packages/r-rgdal/package.py
+++ b/var/spack/repos/builtin/packages/r-rgdal/package.py
@@ -23,6 +23,7 @@ class RRgdal(RPackage):
cran = "rgdal"
+ version('1.5-32', sha256='4583a4e187492eb936b59bc6bfeefea687b115bc3ae25172e0ed348b38f473ed')
version('1.5-28', sha256='7f54432cfa8c0db463f68e8856c3ca0a90671dc841ac5203af049eb318e261a2')
version('1.5-19', sha256='6fbfd71b19e7b8d9dbddc91cb1eef8890c74a1e2bf8f619da165ff51bf1231b2')
version('1.5-18', sha256='53467c19bc93d8ea311458eaa281c8c456168ab75e84d76ef5cc6c00f53122df')
diff --git a/var/spack/repos/builtin/packages/r-rgenoud/package.py b/var/spack/repos/builtin/packages/r-rgenoud/package.py
index 5c74e6255c..e4246403da 100644
--- a/var/spack/repos/builtin/packages/r-rgenoud/package.py
+++ b/var/spack/repos/builtin/packages/r-rgenoud/package.py
@@ -13,6 +13,7 @@ class RRgenoud(RPackage):
cran = "rgenoud"
+ version('5.9-0.3', sha256='31560a8dad791f9c47a673e90d397b3fc60da1a58be1ae1486ace90d988eb55f')
version('5.8-3.0', sha256='9beb11b5edab3ab3aa6001daa39668b240a8e0328be9d55db4e23ff88ce3235d')
version('5.8-2.0', sha256='106c4f6a6df5159578e929a0141b3cfbaa88141a70703ff59a1fc48a27e2d239')
version('5.8-1.0', sha256='9deca354be6887f56bf9f4ca9a7291296050e51149ae9a3b757501704126c38a')
diff --git a/var/spack/repos/builtin/packages/r-rgl/package.py b/var/spack/repos/builtin/packages/r-rgl/package.py
index b4ec4539b1..3860fb7491 100644
--- a/var/spack/repos/builtin/packages/r-rgl/package.py
+++ b/var/spack/repos/builtin/packages/r-rgl/package.py
@@ -18,6 +18,7 @@ class RRgl(RPackage):
cran = "rgl"
+ version('0.108.3.2', sha256='033af3aceade6c21d0a602958fff1c25c21febc7d0e867cf88860cfa25fc3c65')
version('0.108.3', sha256='89f96eb462cacfcc796ad351d7dac0480a7eb9f80e9bd75e58c5a79f0ee8133b')
version('0.104.16', sha256='b82d2e2b965e76d6cc55bbd15ee0f79c36913ab09ce5436d2104551563462a99')
version('0.100.26', sha256='e1889c2723ad458b39fdf9366fdaf590d7657d3762748f8534a8491ef754e740')
diff --git a/var/spack/repos/builtin/packages/r-rinside/package.py b/var/spack/repos/builtin/packages/r-rinside/package.py
index 259b3aa560..0dcea7f676 100644
--- a/var/spack/repos/builtin/packages/r-rinside/package.py
+++ b/var/spack/repos/builtin/packages/r-rinside/package.py
@@ -26,9 +26,11 @@ class RRinside(RPackage):
cran = "RInside"
+ version('0.2.17', sha256='0be28c44ee34cba669a7264d2b99c289230645598ca78e21682559dc31824348')
version('0.2.16', sha256='7ae4ade128ea05f37068d59e610822ff0b277f9d39d8900f7eb31759ad5a2a0e')
version('0.2.15', sha256='1e1d87a3584961f3aa4ca6acd4d2f3cda26abdab027ff5be2fd5cd76a98af02b')
version('0.2.14', sha256='8de5340993fe879ca00fa559c5b1b27b408ba78bfc5f67d36d6f0b8d8e8649cf')
version('0.2.13', sha256='be1da861f4f8c1292f0691bce05978e409a081f24ad6006ae173a6a89aa4d031')
- depends_on('r-rcpp@0.11.0:', type=('build', 'run'))
+ depends_on('r-rcpp', type=('build', 'run'))
+ depends_on('r-rcpp@0.11.0:', type=('build', 'run'), when='@:0.2.16')
diff --git a/var/spack/repos/builtin/packages/r-rjags/package.py b/var/spack/repos/builtin/packages/r-rjags/package.py
index 5b1438644e..a91239f700 100644
--- a/var/spack/repos/builtin/packages/r-rjags/package.py
+++ b/var/spack/repos/builtin/packages/r-rjags/package.py
@@ -14,6 +14,7 @@ class RRjags(RPackage):
cran = "rjags"
+ version('4-13', sha256='f85cc34c5127b828d8a3fa3613ef29f147c868bdaf55eb0f7406c10abbf92b32')
version('4-12', sha256='b91f34c3f9ebf78fa44bd661346fbb6f28a01693a7203ac133c98392dd273e10')
version('4-10', sha256='bd3e0bdf50b23b63061a0caa2428be585ccbf0b3f5d28eaa690e714e508d0ada')
version('4-8', sha256='1529827ab11493fb5f05552e239d700ae2f818995d86d3c9e4c92523f594b59f')
diff --git a/var/spack/repos/builtin/packages/r-rlang/package.py b/var/spack/repos/builtin/packages/r-rlang/package.py
index 0d7a88efa4..9cc4778a4e 100644
--- a/var/spack/repos/builtin/packages/r-rlang/package.py
+++ b/var/spack/repos/builtin/packages/r-rlang/package.py
@@ -14,6 +14,7 @@ class RRlang(RPackage):
cran = "rlang"
+ version('1.0.2', sha256='8de87c3e6fb0b3cce2dabc6908186f8e1528cc0c16b54de965fe02d405fdd7cc')
version('1.0.1', sha256='e59fd5c0f7530dbe329aa01621f6ef5a6474ff3ec96de0c0d24018fc2f21ad7f')
version('1.0.0', sha256='ab6134c97b3100613ba2a15792fde5341f485ba85432a81370c6270c73396e6a')
version('0.4.12', sha256='2a26915738be120a56ec93e781bcb50ffa1031e11904544198b4a15c35029915')
@@ -32,3 +33,4 @@ class RRlang(RPackage):
depends_on('r@3.1.0:', type=('build', 'run'))
depends_on('r@3.2.0:', type=('build', 'run'), when='@0.4.0:')
depends_on('r@3.3.0:', type=('build', 'run'), when='@0.4.10:')
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@1.0.2:')
diff --git a/var/spack/repos/builtin/packages/r-rmarkdown/package.py b/var/spack/repos/builtin/packages/r-rmarkdown/package.py
index 0e657310f6..2923bf6be2 100644
--- a/var/spack/repos/builtin/packages/r-rmarkdown/package.py
+++ b/var/spack/repos/builtin/packages/r-rmarkdown/package.py
@@ -14,6 +14,7 @@ class RRmarkdown(RPackage):
cran = "rmarkdown"
+ version('2.14', sha256='e9ec17afa4d9d6e8cf555b56e0c00acc189d8ec0b4406680b14d71d62f0c3220')
version('2.11', sha256='9371255300e7ea4cd936978ad2ca3d205d8605e09f4913cb0d4725005a7a9775')
version('2.9', sha256='6ce5af8b9a7c282619f74d3999d27ec4de12d3f93cde8fd12cc4c19f02ea8668')
version('2.6', sha256='e6e799c472de11e079bc752cca4b4dbd6803650649457bb6ae836cb1edcdf6b0')
@@ -24,21 +25,24 @@ class RRmarkdown(RPackage):
depends_on('r+X', type=('build', 'run'))
depends_on('r@3.0:', type=('build', 'run'))
- depends_on('r-knitr@1.22:', type=('build', 'run'))
- depends_on('r-yaml@2.1.19:', type=('build', 'run'))
- depends_on('r-htmltools@0.3.5:', type=('build', 'run'))
+ depends_on('r-bslib@0.2.5.1:', type=('build', 'run'), when='@2.14:')
depends_on('r-evaluate@0.13:', type=('build', 'run'))
+ depends_on('r-htmltools@0.3.5:', type=('build', 'run'))
+ depends_on('r-jquerylib', type=('build', 'run'), when='@2.11:')
depends_on('r-jsonlite', type=('build', 'run'))
+ depends_on('r-knitr@1.22:', type=('build', 'run'))
+ depends_on('r-stringr@1.2.0:', type=('build', 'run'), when='@1.6:')
depends_on('r-tinytex@0.11:', type=('build', 'run'), when='@1.10:')
depends_on('r-tinytex@0.31:', type=('build', 'run'), when='@2.8:')
depends_on('r-xfun', type=('build', 'run'), when='@1.13:')
depends_on('r-xfun@0.15:', type=('build', 'run'), when='@2.6:')
depends_on('r-xfun@0.21:', type=('build', 'run'), when='@2.8:')
- depends_on('r-jquerylib', type=('build', 'run'), when='@2.11:')
- depends_on('r-stringr@1.2.0:', type=('build', 'run'), when='@1.6:')
+ depends_on('r-xfun@0.30:', type=('build', 'run'), when='@2.14:')
+ depends_on('r-yaml@2.1.19:', type=('build', 'run'))
+ depends_on('pandoc@1.12.3:')
+ depends_on('pandoc@1.14:', when='@2.6:')
+
depends_on('r-rprojroot', type=('build', 'run'), when='@1.3:1.7')
depends_on('r-mime', type=('build', 'run'), when='@1.8:1.14')
depends_on('r-catools', type=('build', 'run'), when='@:1.7')
depends_on('r-base64enc', type=('build', 'run'), when='@:1.14')
- depends_on('pandoc@1.12.3:')
- depends_on('pandoc@1.14:', when='@2.6:')
diff --git a/var/spack/repos/builtin/packages/r-rmpfr/package.py b/var/spack/repos/builtin/packages/r-rmpfr/package.py
index 131da9ff42..e6ad42aec0 100644
--- a/var/spack/repos/builtin/packages/r-rmpfr/package.py
+++ b/var/spack/repos/builtin/packages/r-rmpfr/package.py
@@ -17,6 +17,7 @@ class RRmpfr(RPackage):
cran = "Rmpfr"
+ version('0.8-9', sha256='cfee5ab47d49c6433c372a267f7d849c8f7c61a84e00d08afb047eaafcdbbc8a')
version('0.8-7', sha256='93c2db785ff705dcfc6fa7f0373c2426cdc2ef72ceb5b294edeb2952775f57d2')
version('0.8-2', sha256='74f6af1738b2cd21e7f2564b4cc2c84d5473a3745ba88ec76355d07fdd61f700')
version('0.7-2', sha256='ec1da6ec5292ea6ac95495c6a299591d367e520ae324719817fb884c865603ff')
@@ -31,4 +32,4 @@ class RRmpfr(RPackage):
depends_on('r-gmp@0.6-1:', type=('build', 'run'), when='@0.8-2:')
depends_on('gmp@4.2.3:')
depends_on('mpfr@3.0.0:')
- depends_on('texlive', type='build')
+ depends_on('texlive@2019:', type='build')
diff --git a/var/spack/repos/builtin/packages/r-rms/package.py b/var/spack/repos/builtin/packages/r-rms/package.py
index b973a83cf8..88ec073f19 100644
--- a/var/spack/repos/builtin/packages/r-rms/package.py
+++ b/var/spack/repos/builtin/packages/r-rms/package.py
@@ -25,6 +25,7 @@ class RRms(RPackage):
cran = "rms"
+ version('6.3-0', sha256='6c41eb670daf5e4391cc2f2a19e20a591f90769c124300a7ccf555820140d3f9')
version('6.2-0', sha256='10d58cbfe39fb434223834e29e5248c9384cded23e6267cfc99367d0f5ee24b6')
version('6.1-0', sha256='b89ec3b9211a093bfe83a2a8107989b5ce3b7b7c323b88a5d887d99753289f52')
version('5.1-4', sha256='38f5844c4944a95b2adebea6bb1d163111270b8662399ea0349c45c0758076a6')
@@ -35,6 +36,7 @@ class RRms(RPackage):
depends_on('r@3.5.0:', type=('build', 'run'))
depends_on('r-hmisc@4.3-0:', type=('build', 'run'))
+ depends_on('r-hmisc@4.7-0:', type=('build', 'run'), when='@6.3-0:')
depends_on('r-survival@3.1-6:', type=('build', 'run'))
depends_on('r-survival@3.1-12:', type=('build', 'run'), when='@6.1-0:')
depends_on('r-lattice', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rmutil/package.py b/var/spack/repos/builtin/packages/r-rmutil/package.py
index 620031d2ec..388dd28974 100644
--- a/var/spack/repos/builtin/packages/r-rmutil/package.py
+++ b/var/spack/repos/builtin/packages/r-rmutil/package.py
@@ -16,6 +16,7 @@ class RRmutil(RPackage):
cran = "rmutil"
+ version('1.1.9', sha256='3a68cc4058394fcb6bab960a680bad939ad7270888f4c271ca6438e49670333c')
version('1.1.5', sha256='6077e643d6daeba6edcf49d928320b54cc6aa6ff59934f9e9e6071a2f9afb2f6')
version('1.1.3', sha256='7abaf41e99d1c4a0e4082c4594964ac1421c53b4268116c82fa55aa8bc0582da')
diff --git a/var/spack/repos/builtin/packages/r-rncl/package.py b/var/spack/repos/builtin/packages/r-rncl/package.py
index 4e1cfd9e40..bc870bc1b5 100644
--- a/var/spack/repos/builtin/packages/r-rncl/package.py
+++ b/var/spack/repos/builtin/packages/r-rncl/package.py
@@ -17,6 +17,7 @@ class RRncl(RPackage):
cran = "rncl"
+ version('0.8.6', sha256='fcc972c04fb43ace0876eb640a6433caddf6ec8304f7ceee37107d812ce68ffb')
version('0.8.4', sha256='6b19d0dd9bb08ecf99766be5ad684bcd1894d1cd9291230bdd709dbd3396496b')
depends_on('r@3.1.1:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rnexml/package.py b/var/spack/repos/builtin/packages/r-rnexml/package.py
index 72a709321c..46dc2d2522 100644
--- a/var/spack/repos/builtin/packages/r-rnexml/package.py
+++ b/var/spack/repos/builtin/packages/r-rnexml/package.py
@@ -16,6 +16,7 @@ class RRnexml(RPackage):
cran = "RNeXML"
+ version('2.4.7', sha256='cb311d6dda33a95521a6df360a2d2f4e6d6bc6b330ac5e19ea721ca665bce6fe')
version('2.4.5', sha256='2b667ecb6400e4c0c125ca73a98cde81330cde3a85b764261f77159e702754f3')
depends_on('r@3.0.0:', type=('build', 'run'))
@@ -31,3 +32,4 @@ class RRnexml(RPackage):
depends_on('r-stringr@1.0:', type=('build', 'run'))
depends_on('r-stringi', type=('build', 'run'))
depends_on('r-xml2', type=('build', 'run'))
+ depends_on('r-rlang', type=('build', 'run'), when='@2.4.7:')
diff --git a/var/spack/repos/builtin/packages/r-robust/package.py b/var/spack/repos/builtin/packages/r-robust/package.py
index e721f25366..14228c2c7e 100644
--- a/var/spack/repos/builtin/packages/r-robust/package.py
+++ b/var/spack/repos/builtin/packages/r-robust/package.py
@@ -15,6 +15,7 @@ class RRobust(RPackage):
cran = "robust"
+ version('0.7-0', sha256='5e1aac30e185e416c22445663704f39433af9fdb48452185f2c9beb3528084b9')
version('0.6-1', sha256='496fd225f6bc6f734e338308f18475125aaf691b39e25308bddb284d3106117d')
version('0.5-0.0', sha256='82f0b50028938966f807a4c4da5c345a3a64ccafd9a31c64a22cda852ed345cf')
version('0.4-18.1', sha256='de31901882873ef89748bb6863caf55734431df5b3eb3c6663ed17ee2e4a4077')
diff --git a/var/spack/repos/builtin/packages/r-robustbase/package.py b/var/spack/repos/builtin/packages/r-robustbase/package.py
index 4afd48c013..7bab338143 100644
--- a/var/spack/repos/builtin/packages/r-robustbase/package.py
+++ b/var/spack/repos/builtin/packages/r-robustbase/package.py
@@ -17,6 +17,7 @@ class RRobustbase(RPackage):
cran = "robustbase"
+ version('0.95-0', sha256='5cfaea1c46df6d45086614fea5f152c8da8ebfcadf33bb8df5b82e742eef9724')
version('0.93-9', sha256='d75fb5075463fec61d063bced7003936e9198492328b6fae15f67e8415713c45')
version('0.93-7', sha256='8911d2d0fdca5e2627033e046279f9d106e25ce98d588f9ccc4d8e4b42680956')
version('0.93-5', sha256='bde564dbd52f04ab32f9f2f9dd09b9578f3ccd2541cf5f8ff430da42a55e7f56')
diff --git a/var/spack/repos/builtin/packages/r-roxygen2/package.py b/var/spack/repos/builtin/packages/r-roxygen2/package.py
index 52d6adbf1a..68f1dc9ec1 100644
--- a/var/spack/repos/builtin/packages/r-roxygen2/package.py
+++ b/var/spack/repos/builtin/packages/r-roxygen2/package.py
@@ -16,6 +16,7 @@ class RRoxygen2(RPackage):
cran = "roxygen2"
+ version('7.2.0', sha256='2ebfcfd567b9db6c606c6d42be1645b4e987f987995a2ad8954fa963a519448b')
version('7.1.2', sha256='b3693d1eb57bb1c27134447ea7f64c353c085dd2237af7cfacc75fca3d2fc5fd')
version('7.1.1', sha256='bdc55ded037d4366f4d25a0d69e880dacc0fa22bee20f595d45855eef8548861')
version('7.1.0', sha256='7e9b36f6e7c01a5c8c4747340b3d0c064ce2e48c93fcfbfe45139854fae74103')
@@ -27,6 +28,7 @@ class RRoxygen2(RPackage):
depends_on('r@3.2:', type=('build', 'run'), when='@7.1.0:')
depends_on('r@3.3:', type=('build', 'run'), when='@7.1.2:')
depends_on('r-brew', type=('build', 'run'))
+ depends_on('r-cli@3.3.0:', type=('build', 'run'), when='@7.2.0:')
depends_on('r-commonmark', type=('build', 'run'))
depends_on('r-desc@1.2.0:', type=('build', 'run'))
depends_on('r-digest', type=('build', 'run'))
@@ -36,8 +38,10 @@ class RRoxygen2(RPackage):
depends_on('r-purrr@0.3.3:', type=('build', 'run'), when='@7.1.0:')
depends_on('r-r6@2.1.2:', type=('build', 'run'))
depends_on('r-rlang', type=('build', 'run'), when='@7.1.0:')
+ depends_on('r-rlang@1.0.0:', type=('build', 'run'), when='@7.2.0:')
depends_on('r-stringi', type=('build', 'run'))
depends_on('r-stringr@1.0.0:', type=('build', 'run'))
+ depends_on('r-withr', type=('build', 'run'), when='@7.2.0:')
depends_on('r-xml2', type=('build', 'run'))
depends_on('r-cpp11', type=('build', 'run'), when='@7.1.2:')
diff --git a/var/spack/repos/builtin/packages/r-rpart-plot/package.py b/var/spack/repos/builtin/packages/r-rpart-plot/package.py
index d32f53295c..66cf4861ba 100644
--- a/var/spack/repos/builtin/packages/r-rpart-plot/package.py
+++ b/var/spack/repos/builtin/packages/r-rpart-plot/package.py
@@ -14,6 +14,7 @@ class RRpartPlot(RPackage):
cran = "rpart.plot"
+ version('3.1.1', sha256='30736240058df21a96d10912a091d938f821d521a3bc4efb9aa4ef6fb233024d')
version('3.1.0', sha256='2aaba0c0cabbc17aca9085248b0ad74ee7ff2b8f729e020e84b3917de174c15e')
version('3.0.9', sha256='1150f5e9899b3b31b17160617cd99c3ad340c8361aeb229264a7a3a3a28015a4')
version('3.0.7', sha256='04e7fcadfa907507b74529c3ecfae4a0c782badf55e87d9c62dbd9a536ea9144')
diff --git a/var/spack/repos/builtin/packages/r-rpostgres/package.py b/var/spack/repos/builtin/packages/r-rpostgres/package.py
index 13a21556cb..95a3b3af1a 100644
--- a/var/spack/repos/builtin/packages/r-rpostgres/package.py
+++ b/var/spack/repos/builtin/packages/r-rpostgres/package.py
@@ -14,6 +14,7 @@ class RRpostgres(RPackage):
cran = "RPostgres"
+ version('1.4.4', sha256='c9cc0648c432f837fd0eb4922db4903357244d5a2cedd04ea236f249b08acdfc')
version('1.4.3', sha256='a5be494a54b6e989fadafdc6ee2dc5c4c15bb17bacea9ad540b175c693331be2')
version('1.3.1', sha256='f68ab095567317ec32d3faa10e5bcac400aee5aeca8d7132260d4e90f82158ea')
diff --git a/var/spack/repos/builtin/packages/r-rprojroot/package.py b/var/spack/repos/builtin/packages/r-rprojroot/package.py
index b7711232c4..db515f90a6 100644
--- a/var/spack/repos/builtin/packages/r-rprojroot/package.py
+++ b/var/spack/repos/builtin/packages/r-rprojroot/package.py
@@ -15,6 +15,7 @@ class RRprojroot(RPackage):
cran = "rprojroot"
+ version('2.0.3', sha256='50604247470e910cecfe9b76df754bf96a0d701f81b732f7aa9c90a20d30f897')
version('2.0.2', sha256='5fa161f0d4ac3b7a99dc6aa2d832251001dc92e93c828593a51fe90afd019e1f')
version('1.3-2', sha256='df5665834941d8b0e377a8810a04f98552201678300f168de5f58a587b73238b')
version('1.2', sha256='28b4d235ce67314528a0c1cc7e98faed42437b42e07fca18a59a80fdc3eefeb9')
diff --git a/var/spack/repos/builtin/packages/r-rrcov/package.py b/var/spack/repos/builtin/packages/r-rrcov/package.py
index ee28602ea5..1147c69e60 100644
--- a/var/spack/repos/builtin/packages/r-rrcov/package.py
+++ b/var/spack/repos/builtin/packages/r-rrcov/package.py
@@ -21,6 +21,7 @@ class RRrcov(RPackage):
cran = "rrcov"
+ version('1.7-0', sha256='cbcca84a82d63fa50556aa8db29312b9bb588a638eb306ce4a81c271529228fd')
version('1.6-1', sha256='9f3b500f2bdac375d0374cd1b120806c785b1981101d7d018fc1fcc73e305d90')
version('1.6-0', sha256='795f3a49b3e17c9c6e0fdd865e81a0402cefda970032c8299bcf2056ca7ec944')
version('1.5-5', sha256='1f7f07558e347e7d1f1adff68631764670bc672777a7d990901c4fa94cc0e629')
diff --git a/var/spack/repos/builtin/packages/r-rrpp/package.py b/var/spack/repos/builtin/packages/r-rrpp/package.py
index 95cea8c2fa..ac672ab773 100644
--- a/var/spack/repos/builtin/packages/r-rrpp/package.py
+++ b/var/spack/repos/builtin/packages/r-rrpp/package.py
@@ -25,6 +25,7 @@ class RRrpp(RPackage):
cran = "RRPP"
+ version('1.2.3', sha256='6eee638af94d69d4dd471a5e01243622dedef3c0c95b3363e21e8e11f0ea564c')
version('1.1.2', sha256='2b563f3db9e349abe481444f48a1a3e6bc1154de8259b7a7060ab588287e80c0')
version('0.6.2', sha256='f8ffa318d806184c0e65929ea1b8b6a88bb9e45f77db2da5a83c6fe550b084dc')
version('0.4.2', sha256='21a4ebb549d21f66ee9107adf762eee630e478bc740f232f384ba1a6b1cd3bf4')
diff --git a/var/spack/repos/builtin/packages/r-rsconnect/package.py b/var/spack/repos/builtin/packages/r-rsconnect/package.py
index 82a842d087..78b9d85dc7 100644
--- a/var/spack/repos/builtin/packages/r-rsconnect/package.py
+++ b/var/spack/repos/builtin/packages/r-rsconnect/package.py
@@ -15,6 +15,7 @@ class RRsconnect(RPackage):
cran = "rsconnect"
+ version('0.8.26', sha256='faafabbed803743799b345051f221aef2b4497b421fc98092ca41c05ef6b5fed')
version('0.8.25', sha256='3c055277f745f2ca37a73e2f425249307cea4dc95ecc59fbe05ee8b6cf26d9cf')
version('0.8.17', sha256='64767a4d626395b7871375956a9f0455c3d64ff6e779633b0e554921d85da231')
@@ -23,7 +24,9 @@ class RRsconnect(RPackage):
depends_on('r-digest', type=('build', 'run'))
depends_on('r-jsonlite', type=('build', 'run'))
depends_on('r-openssl', type=('build', 'run'))
+ depends_on('r-openssl@2.0.0:', type=('build', 'run'), when='@0.8.26:')
depends_on('r-packrat@0.6:', type=('build', 'run'), when='@0.8.18:')
depends_on('r-packrat@0.5:', type=('build', 'run'))
+ depends_on('r-packrat@0.6:', type=('build', 'run'), when='@0.8.26:')
depends_on('r-rstudioapi@0.5:', type=('build', 'run'))
depends_on('r-yaml@2.1.5:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-rspectra/package.py b/var/spack/repos/builtin/packages/r-rspectra/package.py
index add9d55e88..d2683e0647 100644
--- a/var/spack/repos/builtin/packages/r-rspectra/package.py
+++ b/var/spack/repos/builtin/packages/r-rspectra/package.py
@@ -22,6 +22,7 @@ class RRspectra(RPackage):
cran = "RSpectra"
+ version('0.16-1', sha256='cba5d3403d6a7d0e27abf6279fbfea6e0d0fe36b28c688bbadb8eafb3841329a')
version('0.16-0', sha256='aaf1cfc9ffe3a4c6684247899924e1c18306971dfef4bae1dc596a2fb42a64a9')
version('0.15-0', sha256='1ad5698201007044a0420cb10b7c48e94312a8a1d22b9d946d5de1c6743969a9')
diff --git a/var/spack/repos/builtin/packages/r-rsqlite/package.py b/var/spack/repos/builtin/packages/r-rsqlite/package.py
index 242f2379d3..f411ecc0b1 100644
--- a/var/spack/repos/builtin/packages/r-rsqlite/package.py
+++ b/var/spack/repos/builtin/packages/r-rsqlite/package.py
@@ -15,6 +15,7 @@ class RRsqlite(RPackage):
cran = "RSQLite"
+ version('2.2.14', sha256='2ae36a875ebc02497985b2ad9ddc6a5434f576e2ab25769580749d9e4f3b607c')
version('2.2.10', sha256='06aeff33902082ef1ebd5378cd0927df7922aaf377c78acfdd8f34f2888800a8')
version('2.2.9', sha256='4423f1fea179ecd1c09b0b52bfb684983a27de82d5807590b5fc723697d5bb1c')
version('2.2.2', sha256='299ceafd4986f60dbca2d705112aa3c29ff68fcbc188d9caaa0493e63a57a873')
diff --git a/var/spack/repos/builtin/packages/r-rstan/package.py b/var/spack/repos/builtin/packages/r-rstan/package.py
index 0b728c9132..d4da197100 100644
--- a/var/spack/repos/builtin/packages/r-rstan/package.py
+++ b/var/spack/repos/builtin/packages/r-rstan/package.py
@@ -21,6 +21,7 @@ class RRstan(RPackage):
cran = "rstan"
+ version('2.21.5', sha256='86e4fe562d8ddcd0b02336f35a420fa8786dd21de7ca2bebb4ed6e9c252bb9ea')
version('2.21.3', sha256='76bcbf1cb246a202e5680ea6e91bb4142ce19156e8960a9850f6ea0e206f92b1')
version('2.21.2', sha256='e30e04d38a612e2cb3ac69b53eaa19f7ede8b3548bf82f7892a2e9991d46054a')
version('2.19.2', sha256='31e4ceb9c327cd62873225097ffa538c2ac4cb0547c52271e52e4c7652d508da')
diff --git a/var/spack/repos/builtin/packages/r-rstantools/package.py b/var/spack/repos/builtin/packages/r-rstantools/package.py
index f42a24a864..4251c213d8 100644
--- a/var/spack/repos/builtin/packages/r-rstantools/package.py
+++ b/var/spack/repos/builtin/packages/r-rstantools/package.py
@@ -17,6 +17,7 @@ class RRstantools(RPackage):
cran = "rstantools"
+ version('2.2.0', sha256='cb810baeb90c67668361b666c6862df9917aff6aaec63d2c3a485f28407c4eb7')
version('2.1.1', sha256='c95b15de8ec577eeb24bb5206e7b685d882f88b5e6902efda924b7217f463d2d')
version('1.5.1', sha256='5cab16c132c12e84bd08e18cd6ef25ba39d67a04ce61015fc4490659c7cfb485')
diff --git a/var/spack/repos/builtin/packages/r-rtsne/package.py b/var/spack/repos/builtin/packages/r-rtsne/package.py
index 09026705ae..26fd3d64bc 100644
--- a/var/spack/repos/builtin/packages/r-rtsne/package.py
+++ b/var/spack/repos/builtin/packages/r-rtsne/package.py
@@ -15,6 +15,7 @@ class RRtsne(RPackage):
cran = "Rtsne"
+ version('0.16', sha256='52a05adc826c28212e97d11c54eba3fec45d14eb52039c0f47f62a8e338ffbd5')
version('0.15', sha256='56376e4f0a382fad3d3d40e2cb0562224be5265b827622bcd235e8fc63df276c')
version('0.13', sha256='1c3bffe3bd11733ee4fe01749c293669daafda1af2ec74f9158f6080625b999d')
version('0.11', sha256='1e2e7368f3de870b9270f70b207ba9e8feea67f9b061cb6abb2fec785fb7247e')
diff --git a/var/spack/repos/builtin/packages/r-runjags/package.py b/var/spack/repos/builtin/packages/r-runjags/package.py
index ba9a3cb291..2ed5e29542 100644
--- a/var/spack/repos/builtin/packages/r-runjags/package.py
+++ b/var/spack/repos/builtin/packages/r-runjags/package.py
@@ -22,6 +22,7 @@ class RRunjags(RPackage):
cran = "runjags"
+ version('2.2.1-7', sha256='e81fdb15e59cdceda125d6ae7cf0cde93361ba80b123d51afd1ecdc993f25016')
version('2.2.0-3', sha256='1b1fc0b0cfecf9ecdecc3abcba804cdc114b3c5352d5cc801602deeca90db528')
version('2.2.0-2', sha256='e5dfeb83d36faf19ebe64429f6db64aedecf3c9a040fd5bf9c0200914bf5039a')
diff --git a/var/spack/repos/builtin/packages/r-sass/package.py b/var/spack/repos/builtin/packages/r-sass/package.py
index 10ce4769a7..f27b60bb53 100644
--- a/var/spack/repos/builtin/packages/r-sass/package.py
+++ b/var/spack/repos/builtin/packages/r-sass/package.py
@@ -16,6 +16,7 @@ class RSass(RPackage):
cran = "sass"
+ version('0.4.1', sha256='850fcb6bd49085d5afd25ac18da0744234385baf1f13d8c0a320f4da2de608bb')
version('0.4.0', sha256='7d06ca15239142a49e88bb3be494515abdd8c75f00f3f1b0ee7bccb55019bc2b')
depends_on('r-fs', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-scales/package.py b/var/spack/repos/builtin/packages/r-scales/package.py
index dcfd92b087..54ee2f3f85 100644
--- a/var/spack/repos/builtin/packages/r-scales/package.py
+++ b/var/spack/repos/builtin/packages/r-scales/package.py
@@ -14,6 +14,7 @@ class RScales(RPackage):
cran = "scales"
+ version('1.2.0', sha256='185d50240e6b3e84d36ec7fbca6aef7a85db7c8c1b0dde51d4af28d363ce02df')
version('1.1.1', sha256='40b2b66522f1f314a20fd09426011b0cdc9d16b23ee2e765fe1930292dd03705')
version('1.0.0', sha256='0c1f4a14edd336a404da34a3cc71a6a9d0ca2040ba19360c41a79f36e06ca30c')
version('0.5.0', sha256='dbfcc0817c4ab8b8777ec7d68ebfe220177c193cfb5bd0e8ba5d365dbfe3e97d')
@@ -29,6 +30,7 @@ class RScales(RPackage):
depends_on('r-munsell@0.5:', type=('build', 'run'))
depends_on('r-r6', type=('build', 'run'))
depends_on('r-rcolorbrewer', type=('build', 'run'))
+ depends_on('r-rlang@1.0.0:', type=('build', 'run'), when='@1.2.0:')
depends_on('r-viridislite', type=('build', 'run'))
depends_on('r-dichromat', type=('build', 'run'), when='@:0.5.0')
diff --git a/var/spack/repos/builtin/packages/r-scattermore/package.py b/var/spack/repos/builtin/packages/r-scattermore/package.py
index be4afdb4ac..cd40ad13c4 100644
--- a/var/spack/repos/builtin/packages/r-scattermore/package.py
+++ b/var/spack/repos/builtin/packages/r-scattermore/package.py
@@ -14,6 +14,7 @@ class RScattermore(RPackage):
cran = "scattermore"
+ version('0.8', sha256='dbdd73d8261cb063464bb29d5c17733b7e87bc50a19948bc80439e19f2a9f8e5')
version('0.7', sha256='f36280197b8476314d6ce81a51c4ae737180b180204043d2937bc25bf3a5dfa2')
depends_on('r-ggplot2', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-segmented/package.py b/var/spack/repos/builtin/packages/r-segmented/package.py
index a51f783f8e..fa43303ac7 100644
--- a/var/spack/repos/builtin/packages/r-segmented/package.py
+++ b/var/spack/repos/builtin/packages/r-segmented/package.py
@@ -20,6 +20,7 @@ class RSegmented(RPackage):
cran = "segmented"
+ version('1.6-0', sha256='6baf7f0a4f5d37b945312d28fcbca47cc3c171d097c43a28cf7ffc998a4ce569')
version('1.4-0', sha256='306940d3fe38588d5f52a52a217b560620b9ec9f338b32f604dfd78ffd43c276')
version('1.3-4', sha256='8276bfbb3e5c1d7a9a61098f72ac9b2b0f52c89ae9f9b715f76b22303cc3902d')
version('1.3-1', sha256='b9b6e82bf72f108c69cb8fa01bd02fb99946c73ca3c8c2f8ae0abb1f460c143d')
@@ -29,3 +30,4 @@ class RSegmented(RPackage):
version('0.5-1.4', sha256='b1dc5f79ccc076c2943b15fe4f339368afa241797b7e80c91b62132cfa66809c')
depends_on('r-mass', type=('build', 'run'), when='@1.4-0:')
+ depends_on('r-nlme', type=('build', 'run'), when='@1.6-0:')
diff --git a/var/spack/repos/builtin/packages/r-seqinr/package.py b/var/spack/repos/builtin/packages/r-seqinr/package.py
index 0da3dcd9a0..4b2edf7de4 100644
--- a/var/spack/repos/builtin/packages/r-seqinr/package.py
+++ b/var/spack/repos/builtin/packages/r-seqinr/package.py
@@ -16,6 +16,7 @@ class RSeqinr(RPackage):
cran = "seqinr"
+ version('4.2-16', sha256='c4f3253832fc255197bdce7b4dd381db606c6b787d2e888751b4963acf3a4032')
version('4.2-8', sha256='584b34e9dec0320cef02096eb356a0f6115bbd24356cf62e67356963e9d5e9f7')
version('4.2-5', sha256='de9860759c23af2ec2f2ef03b5dd1cea72c804438eadd369b7d9269bdf8d32fc')
version('3.4-5', sha256='162a347495fd52cbb62e8187a4692e7c50b9fa62123c5ef98f2744c98a05fb9f')
diff --git a/var/spack/repos/builtin/packages/r-seurat/package.py b/var/spack/repos/builtin/packages/r-seurat/package.py
index cb5c43bd15..a7cbf3c6e7 100644
--- a/var/spack/repos/builtin/packages/r-seurat/package.py
+++ b/var/spack/repos/builtin/packages/r-seurat/package.py
@@ -19,6 +19,7 @@ class RSeurat(RPackage):
cran = "Seurat"
+ version('4.1.1', sha256='201aa96919b32378fc4cb67557188214c1242dcbae50cadd7d12c86666af8ace')
version('4.1.0', sha256='2505829a2763e449684dd1b107ee6982e019ee9fecb093adca7b283cad1b315d')
version('3.2.3', sha256='83aa48f75c3756bee23e108a8b01028366e24f237fe990cb441f3525e0613f87')
version('3.1.0', sha256='d8d3fad2950a8f791376e3d20c72ea07c68bf8d82d800661cab5ce696db39d45')
@@ -73,6 +74,7 @@ class RSeurat(RPackage):
depends_on('r-sctransform@0.3.1:', type=('build', 'run'), when='@3.2.3:')
depends_on('r-sctransform@0.3.3:', type=('build', 'run'), when='@4.1.0:')
depends_on('r-seuratobject@4.0.4:', type=('build', 'run'), when='@4.1.0:')
+ depends_on('r-seuratobject@4.1.0:', type=('build', 'run'), when='@4.1.1:')
depends_on('r-shiny', type=('build', 'run'), when='@3.2.3:')
depends_on('r-spatstat-core', type=('build', 'run'), when='@4.1.0:')
depends_on('r-spatstat-geom', type=('build', 'run'), when='@4.1.0:')
diff --git a/var/spack/repos/builtin/packages/r-seuratobject/package.py b/var/spack/repos/builtin/packages/r-seuratobject/package.py
index 342bc14c88..a87be8e1c4 100644
--- a/var/spack/repos/builtin/packages/r-seuratobject/package.py
+++ b/var/spack/repos/builtin/packages/r-seuratobject/package.py
@@ -20,10 +20,16 @@ class RSeuratobject(RPackage):
cran = "SeuratObject"
+ version('4.1.0', sha256='9ca406cb3bd95c588e1a81c5383e3173a446cc0667142b139ca32685b4b20a05')
version('4.0.4', sha256='585261b7d2045193accf817a29e2e3356e731f57c554bed37d232fa49784088c')
depends_on('r@4.0.0:', type=('build', 'run'))
+ depends_on('r-future', type=('build', 'run'), when='@4.1.0:')
+ depends_on('r-future-apply', type=('build', 'run'), when='@4.1.0:')
depends_on('r-matrix@1.3-3:', type=('build', 'run'))
+ depends_on('r-progressr', type=('build', 'run'), when='@4.1.0:')
depends_on('r-rcpp@1.0.5:', type=('build', 'run'))
+ depends_on('r-sp', type=('build', 'run'), when='@4.1.0:')
+ depends_on('r-rgeos', type=('build', 'run'), when='@4.1.0:')
depends_on('r-rlang@0.4.7:', type=('build', 'run'))
depends_on('r-rcppeigen', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-sfsmisc/package.py b/var/spack/repos/builtin/packages/r-sfsmisc/package.py
index 619e3a9843..491febf352 100644
--- a/var/spack/repos/builtin/packages/r-sfsmisc/package.py
+++ b/var/spack/repos/builtin/packages/r-sfsmisc/package.py
@@ -21,6 +21,7 @@ class RSfsmisc(RPackage):
cran = "sfsmisc"
+ version('1.1-13', sha256='a81710357de2dcdaf00d9fa30a29cde0dd83616edc358452fd6105ea88f34218')
version('1.1-12', sha256='9b12184a28fff87cacd0c3602d0cf63acb4d0f3049ad3a6ff16177f6df350782')
version('1.1-8', sha256='b6556af5f807f0769489657a676422cb0734f3d6c918543d2989ef17febc1fa5')
version('1.1-4', sha256='44b6a9c859922e86b7182e54eb781d3264f3819f310343518ebc66f54f305c7d')
diff --git a/var/spack/repos/builtin/packages/r-shadowtext/package.py b/var/spack/repos/builtin/packages/r-shadowtext/package.py
index 29fcf894ed..da7d2e3123 100644
--- a/var/spack/repos/builtin/packages/r-shadowtext/package.py
+++ b/var/spack/repos/builtin/packages/r-shadowtext/package.py
@@ -14,6 +14,7 @@ class RShadowtext(RPackage):
cran = "shadowtext"
+ version('0.1.2', sha256='253c4e737dbb302aa0729e5074e84cbfde2a73bfd7a0fd2c74b557cb728bae7d')
version('0.1.1', sha256='eb06581d7ed06c963eee47548932688fd48eba70b3ebd2a7b41a6501d6e00006')
version('0.0.7', sha256='6e32b1dfd3d4816803848b876666185258b888286ec3d3e8500499ec3eba31e8')
diff --git a/var/spack/repos/builtin/packages/r-shinyfiles/package.py b/var/spack/repos/builtin/packages/r-shinyfiles/package.py
index 10ca43204d..c6521a985c 100644
--- a/var/spack/repos/builtin/packages/r-shinyfiles/package.py
+++ b/var/spack/repos/builtin/packages/r-shinyfiles/package.py
@@ -17,6 +17,7 @@ class RShinyfiles(RPackage):
cran = "shinyFiles"
+ version('0.9.2', sha256='8fbe4b8e1478c5e5efdb8fddcbe210fd2275e61d9ff06efa1672f61dd3268ad0')
version('0.9.1', sha256='05694630ed5ae6ac15307ffcb211c83097fee0f38ca59340a7e68cac62730d39')
version('0.9.0', sha256='51ad2aad61bcae22fb2c48a79d02bf6f86e36ffc49a3b64e26a76d133a955167')
version('0.7.3', sha256='710c8a6191aaf336379bc748daff1160d0d2858e2aee0d98e2ad48e7121d5a05')
diff --git a/var/spack/repos/builtin/packages/r-shinystan/package.py b/var/spack/repos/builtin/packages/r-shinystan/package.py
index bcd5054253..831f515099 100644
--- a/var/spack/repos/builtin/packages/r-shinystan/package.py
+++ b/var/spack/repos/builtin/packages/r-shinystan/package.py
@@ -19,6 +19,7 @@ class RShinystan(RPackage):
cran = "shinystan"
+ version('2.6.0', sha256='a084856a2d66d8744f2c72e3e19ca35e600a508ed7ef1f7ebed8c7fc0738d529')
version('2.5.0', sha256='45f9c552a31035c5de8658bb9e5d72da7ec1f88fbddb520d15fe701c677154a1')
depends_on('r@3.1.0:', type=('build', 'run'))
@@ -32,10 +33,11 @@ class RShinystan(RPackage):
depends_on('r-gtools', type=('build', 'run'))
depends_on('r-markdown@0.7.4:', type=('build', 'run'))
depends_on('r-reshape2', type=('build', 'run'))
- depends_on('r-rsconnect@0.4.2:', type=('build', 'run'))
depends_on('r-rstan@2.17.1:', type=('build', 'run'))
depends_on('r-shinyjs@0.6.0:', type=('build', 'run'))
depends_on('r-shinythemes@1.0.1:', type=('build', 'run'))
depends_on('r-threejs@0.2.1:', type=('build', 'run'))
depends_on('r-xtable', type=('build', 'run'))
depends_on('r-xts@0.9-7:', type=('build', 'run'))
+
+ depends_on('r-rsconnect@0.4.2:', type=('build', 'run'), when='@:2.5.0')
diff --git a/var/spack/repos/builtin/packages/r-sn/package.py b/var/spack/repos/builtin/packages/r-sn/package.py
index 0b28fe9faf..79872dc19f 100644
--- a/var/spack/repos/builtin/packages/r-sn/package.py
+++ b/var/spack/repos/builtin/packages/r-sn/package.py
@@ -16,6 +16,7 @@ class RSn(RPackage):
cran = "sn"
+ version('2.0.2', sha256='957b49027c2111f51893433e902486141a942a5ed384ca605714605de80d1790')
version('2.0.1', sha256='86b3890087657a80fca7a0a756b07410612c34a44d7a1fd7a8f24584379fa8fc')
version('1.6-2', sha256='2fd4730c315efc48958b47990ddb0cbc6ce075f7a27255944a292fb4fc593d9d')
version('1.5-4', sha256='46677ebc109263a68f62b5cf53ec59916cda490e5bc5bbb08276757a677f8674')
diff --git a/var/spack/repos/builtin/packages/r-sp/package.py b/var/spack/repos/builtin/packages/r-sp/package.py
index 9b185c7697..d107751055 100644
--- a/var/spack/repos/builtin/packages/r-sp/package.py
+++ b/var/spack/repos/builtin/packages/r-sp/package.py
@@ -16,6 +16,7 @@ class RSp(RPackage):
cran = "sp"
+ version('1.4-7', sha256='01946953707363b78d3eb8dcf472ea8c6ea0097094aa0ca0b756ce5fac01b1ad')
version('1.4-6', sha256='9aebb3ef2140e8984a67eb93d72f686b8707d48d82445db0c54ae895576ba226')
version('1.4-5', sha256='6beeb216d540475cdead5f2c72d6c7ee400fe2423c1882d72cf57f6df58f09da')
version('1.3-1', sha256='57988b53ba8acc35f3912d62feba4b929a0f757c6b54080c623c5d805e0cb59f')
diff --git a/var/spack/repos/builtin/packages/r-spades-tools/package.py b/var/spack/repos/builtin/packages/r-spades-tools/package.py
index 0204be1b9a..a2ab050eb4 100644
--- a/var/spack/repos/builtin/packages/r-spades-tools/package.py
+++ b/var/spack/repos/builtin/packages/r-spades-tools/package.py
@@ -19,11 +19,13 @@ class RSpadesTools(RPackage):
maintainers = ['dorton21']
+ version('0.3.10', sha256='ba4c075b534caaca413e2e97711b5475c2679d9546c8fee4a07fb2bb94d52c94')
version('0.3.9', sha256='84dc47f55ded58746dcb943fde97fa4a4b852e1d2f45949ab1914cf8454e00f3')
version('0.3.6', sha256='661f8ee792874e7447be78103775b63f18ec69e773a7b275dd977adb406dd3e5')
depends_on('r@3.5.0:', type=('build', 'run'))
depends_on('r@3.6:', type=('build', 'run'), when='@0.3.9:')
+ depends_on('r@4.0:', type=('build', 'run'), when='@0.3.10:')
depends_on('r-backports', type=('build', 'run'))
depends_on('r-checkmate@1.8.2:', type=('build', 'run'))
depends_on('r-circstats@0.2-4:', type=('build', 'run'))
@@ -34,7 +36,9 @@ class RSpadesTools(RPackage):
depends_on('r-quickplot', type=('build', 'run'))
depends_on('r-raster@2.5-8:', type=('build', 'run'))
depends_on('r-rcpp@0.12.12:', type=('build', 'run'))
- depends_on('r-reproducible@0.2.0:', type=('build', 'run'))
- depends_on('r-reproducible@1.2.7:', type=('build', 'run'), when='@0.3.9:')
+ depends_on('r-require', type=('build', 'run'), when='@0.3.10:')
depends_on('r-rgeos', type=('build', 'run'))
depends_on('r-sp@1.2-4:', type=('build', 'run'))
+
+ depends_on('r-reproducible@0.2.0:', type=('build', 'run'), when='@:0.3.6')
+ depends_on('r-reproducible@1.2.7:', type=('build', 'run'), when='@0.3.9')
diff --git a/var/spack/repos/builtin/packages/r-spades/package.py b/var/spack/repos/builtin/packages/r-spades/package.py
index 772009eb8f..2c57ff27ce 100644
--- a/var/spack/repos/builtin/packages/r-spades/package.py
+++ b/var/spack/repos/builtin/packages/r-spades/package.py
@@ -26,10 +26,12 @@ class RSpades(RPackage):
maintainers = ['dorton21']
+ version('2.0.8', sha256='2230704f700d07bda25a23ab5c6630a093c9ed2fe3c47ab6294eebaf1d86f03f')
version('2.0.7', sha256='5b62e9d701aa178be57f22369a5d043c9793a1bd3dcd4acac18c5a6b906ed8a0')
version('2.0.6', sha256='0fa59d1737c67abeb04eae894939bc4700f92d6c2cc2ec3489b4650720ede5a3')
depends_on('r@3.6:', type=('build', 'run'))
+ depends_on('r@4.0:', type=('build', 'run'), when='@2.0.8:')
depends_on('r-quickplot', type=('build', 'run'))
depends_on('r-reproducible@1.2.1.9007:', type=('build', 'run'))
depends_on('r-spades-core@1.0.4:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatialreg/package.py b/var/spack/repos/builtin/packages/r-spatialreg/package.py
index 48c79a77b7..91aa1ae6ba 100644
--- a/var/spack/repos/builtin/packages/r-spatialreg/package.py
+++ b/var/spack/repos/builtin/packages/r-spatialreg/package.py
@@ -33,6 +33,7 @@ class RSpatialreg(RPackage):
cran = "spatialreg"
+ version('1.2-3', sha256='09e0e65f043975d5c1d4be99ef9f29cf0790e962dcde9b7e45a7027d268fce22')
version('1.2-1', sha256='4c40b6b331aa8818254633cfb80d4b9a03b2b6fac2c0104b3b99201d447ba081')
version('1.1-5', sha256='ddbf0773bad2e99b306116ae99a57bf29eecf723d1735820935a6fb7f331b27d')
version('1.1-3', sha256='7609cdfcdfe427d2643a0db6b5360be3f6d60ede8229436ab52092d1c9cf0480')
diff --git a/var/spack/repos/builtin/packages/r-spatstat-core/package.py b/var/spack/repos/builtin/packages/r-spatstat-core/package.py
index ce093c2704..10a0f4dfb2 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-core/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-core/package.py
@@ -41,14 +41,18 @@ class RSpatstatCore(RPackage):
cran = "spatstat.core"
+ version('2.4-4', sha256='e38c39efe8b14d6e8fdbee8dd870b90c52f78ea571ab7988fd3685f48347d13b')
version('2.3-2', sha256='7f4d6d997f9187eda71097a53917e7cbe03f8dcfb4e758d86a90fbe42c92f63c')
depends_on('r@3.5.0:', type=('build', 'run'))
depends_on('r-spatstat-data@2.1-0:', type=('build', 'run'))
depends_on('r-spatstat-geom@2.3-0:', type=('build', 'run'))
+ depends_on('r-spatstat-geom@2.4-0:', type=('build', 'run'), when='@2.4-4:')
+ depends_on('r-spatstat-random@2.2-0:', type=('build', 'run'), when='@2.4-4:')
depends_on('r-nlme', type=('build', 'run'))
depends_on('r-rpart', type=('build', 'run'))
depends_on('r-spatstat-utils@2.2-0:', type=('build', 'run'))
+ depends_on('r-spatstat-utils@2.3.1:', type=('build', 'run'), when='@2.4-4:')
depends_on('r-spatstat-sparse@2.0-0:', type=('build', 'run'))
depends_on('r-mgcv', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatstat-data/package.py b/var/spack/repos/builtin/packages/r-spatstat-data/package.py
index e8a30730ba..a017db7cce 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-data/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-data/package.py
@@ -13,6 +13,7 @@ class RSpatstatData(RPackage):
cran = "spatstat.data"
+ version('2.2-0', sha256='d3943bb4f6509d60bf68e79ce4533c5ec5261f411da6b0ef5238c124fc37c3e5')
version('2.1-2', sha256='bbd118a8e6cd2c41abc764b9f2e798514070862f11e3f2080c27f72268271ae5')
version('1.7-0', sha256='bbc192d43f2b37b308566694cb48ecdbbc4f20ef44b6fc7636564a717a03c12f')
version('1.4-3', sha256='8955b6ac40cc7d0d89e02334bb46f4c223ff0755e5818f132fee753e77918ea2')
diff --git a/var/spack/repos/builtin/packages/r-spatstat-geom/package.py b/var/spack/repos/builtin/packages/r-spatstat-geom/package.py
index 4b0750b143..43a09355bb 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-geom/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-geom/package.py
@@ -26,6 +26,7 @@ class RSpatstatGeom(RPackage):
cran = "spatstat.geom"
+ version('2.4-0', sha256='32b89a409ce87ffe901e4c8720a26cac9629f9816e163c4ad68b7aa012d69e67')
version('2.3-1', sha256='f23e58d05a6d6bfab1345951fa528a9865f2a744e162fe4456161e1b0b5172c0')
depends_on('r@3.5.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py b/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py
index 32c088412d..26aa5f34a8 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py
@@ -39,12 +39,15 @@ class RSpatstatLinnet(RPackage):
cran = "spatstat.linnet"
+ version('2.3-2', sha256='9c78a4b680debfff0f3ae934575c30d03ded49bc9a7179475384af0ebaf13778')
version('2.3-1', sha256='119ba6e3da651aa9594f70a7a35349209534215aa640c2653aeddc6aa25038c3')
depends_on('r@3.5.0:', type=('build', 'run'))
depends_on('r-spatstat-data@2.1-0:', type=('build', 'run'))
depends_on('r-spatstat-geom@2.3-0:', type=('build', 'run'))
+ depends_on('r-spatstat-random@2.2-0:', type=('build', 'run'), when='@2.3-2:')
depends_on('r-spatstat-core@2.3-0:', type=('build', 'run'))
+ depends_on('r-spatstat-core@2.3-2:', type=('build', 'run'), when='@2.3-2:')
depends_on('r-spatstat-utils@2.2-0:', type=('build', 'run'))
depends_on('r-matrix', type=('build', 'run'))
depends_on('r-spatstat-sparse@2.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatstat-random/package.py b/var/spack/repos/builtin/packages/r-spatstat-random/package.py
new file mode 100644
index 0000000000..94780eaba2
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-spatstat-random/package.py
@@ -0,0 +1,33 @@
+# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class RSpatstatRandom(RPackage):
+ """Random Generation Functionality for the 'spatstat' Family.
+
+ Functionality for random generation of spatial data in the 'spatstat'
+ family of packages. Generates random spatial patterns of points according
+ to many simple rules (complete spatial randomness, Poisson, binomial,
+ random grid, systematic, cell), randomised alteration of patterns
+ (thinning, random shift, jittering), simulated realisations of random point
+ processes (simple sequential inhibition, Matern inhibition models, Matern
+ cluster process, Neyman-Scott cluster processes, log-Gaussian Cox
+ processes, product shot noise cluster processes) and simulation of Gibbs
+ point processes (Metropolis-Hastings birth-death-shift algorithm,
+ alternating Gibbs sampler). Also generates random spatial patterns of line
+ segments, random tessellations, and random images (random noise, random
+ mosaics). Excludes random generation on a linear network, which is covered
+ by the separate package 'spatstat.linnet'."""
+
+ cran = "spatstat.random"
+
+ version('2.2-0', sha256='45f0bbdb9dbd53b6c4151c3cdd098451cf787729717ccbb063cd1f33910e604d')
+
+ depends_on('r@3.5.0:', type=('build', 'run'))
+ depends_on('r-spatstat-data@2.1-0:', type=('build', 'run'))
+ depends_on('r-spatstat-geom@2.4-0:', type=('build', 'run'))
+ depends_on('r-spatstat-utils@2.2-0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py b/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py
index 88f9ecaac0..91756cf863 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py
@@ -15,6 +15,7 @@ class RSpatstatSparse(RPackage):
cran = "spatstat.sparse"
+ version('2.1-1', sha256='9a35ad69715b767b3ae60b02dce05ccf108fcccdf95bbc8f7d02557bcbde7303')
version('2.1-0', sha256='0019214418668cba9f01ee5901ed7f4dba9cfee5ff62d5c7e1c914adfbea0e91')
depends_on('r@3.5.0:', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-spatstat-utils/package.py b/var/spack/repos/builtin/packages/r-spatstat-utils/package.py
index bc0da61e73..2a93d61c66 100644
--- a/var/spack/repos/builtin/packages/r-spatstat-utils/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat-utils/package.py
@@ -14,6 +14,7 @@ class RSpatstatUtils(RPackage):
cran = "spatstat.utils"
+ version('2.3-1', sha256='5b914308df0585993084b5e95967864eea0314c98ed6af58267b64b2235dfe22')
version('2.3-0', sha256='5f096ce5a201482d61e6d6859be7d40a55705ba5c6ebadd4875367ef9cb0db1a')
version('1.20-2', sha256='62c2413f989965a9fa6395742a605004b736a27c24304e6ffaebf2134019ce18')
version('1.17-0', sha256='39cd683ed7f41d8adc9e28af073d91b244aa1cf5ad966dfbb396ee3ee79f0922')
diff --git a/var/spack/repos/builtin/packages/r-spatstat/package.py b/var/spack/repos/builtin/packages/r-spatstat/package.py
index 90878ea745..863b7d990e 100644
--- a/var/spack/repos/builtin/packages/r-spatstat/package.py
+++ b/var/spack/repos/builtin/packages/r-spatstat/package.py
@@ -48,6 +48,7 @@ class RSpatstat(RPackage):
cran = "spatstat"
+ version('2.3-4', sha256='4ea0f8d70b926b92bf4a06521f985a0bb6d573619f5d526957c87860ccb999da')
version('2.3-0', sha256='da02443722f2c7ef9d59a2799b7b8002c94cecf73f2b0d2b29280d39f49c4c06')
version('1.64-1', sha256='ca3fc7d0d6b7a83fd045a7502bf03c6871fa1ab2cf411647c438fd99b4eb551a')
version('1.63-3', sha256='07b4a1a1b37c91944f31779dd789598f4a5ad047a3de3e9ec2ca99b9e9565528')
@@ -56,11 +57,17 @@ class RSpatstat(RPackage):
depends_on('r@3.5.0:', type=('build', 'run'), when='@2.3-0:')
depends_on('r-spatstat-data@1.4-2:', type=('build', 'run'))
depends_on('r-spatstat-data@2.1-0:', type=('build', 'run'), when='@2.3-0:')
+ depends_on('r-spatstat-data@2.1-2:', type=('build', 'run'), when='@2.3-4:')
depends_on('r-spatstat-geom@2.3-0:', type=('build', 'run'), when='@2.3-0:')
+ depends_on('r-spatstat-geom@2.4-0:', type=('build', 'run'), when='@2.3-4:')
+ depends_on('r-spatstat-random@2.2-0:', type=('build', 'run'), when='@2.3-4:')
depends_on('r-spatstat-core@2.3-0:', type=('build', 'run'), when='@2.3-0:')
+ depends_on('r-spatstat-core@2.4-1:', type=('build', 'run'), when='@2.3-4:')
depends_on('r-spatstat-linnet@2.3-0:', type=('build', 'run'), when='@2.3-0:')
+ depends_on('r-spatstat-linnet@2.3-2:', type=('build', 'run'), when='@2.3-4:')
depends_on('r-spatstat-utils@1.17:', type=('build', 'run'))
depends_on('r-spatstat-utils@2.2-0:', type=('build', 'run'), when='@2.3-0:')
+ depends_on('r-spatstat-utils@2.3-0:', type=('build', 'run'), when='@2.3-4:')
depends_on('r-rpart', type=('build', 'run'), when='@:1.64-1')
depends_on('r-nlme', type=('build', 'run'), when='@:1.64-1')
diff --git a/var/spack/repos/builtin/packages/r-spdep/package.py b/var/spack/repos/builtin/packages/r-spdep/package.py
index b465343a5b..48ec0c3979 100644
--- a/var/spack/repos/builtin/packages/r-spdep/package.py
+++ b/var/spack/repos/builtin/packages/r-spdep/package.py
@@ -21,6 +21,7 @@ class RSpdep(RPackage):
cran = "spdep"
+ version('1.2-4', sha256='a9f4d5af56efb1a2bcd3e85fe4d0e8a42896a2c30a790b2487e1ebadf398a677')
version('1.2-2', sha256='94f46f98be3bedde1655f8768b7ef2a977c399b5ca8977c68007e9e3b7515e23')
version('1.2-1', sha256='e8cc788d4e6fbb962f4e1fb45dff166cd9dd0935a9fd502699f9a95fdf4a43f9')
version('1.1-5', sha256='47cb46cf5cf1f4386eb1b5e4d8541d577d7f2939e74addbdb884ecf2323f6d5d')
diff --git a/var/spack/repos/builtin/packages/r-speedglm/package.py b/var/spack/repos/builtin/packages/r-speedglm/package.py
index ec796e6a5d..4feb5e5a20 100644
--- a/var/spack/repos/builtin/packages/r-speedglm/package.py
+++ b/var/spack/repos/builtin/packages/r-speedglm/package.py
@@ -14,6 +14,7 @@ class RSpeedglm(RPackage):
cran = "speedglm"
+ version('0.3-4', sha256='1a12db7dbceaaf5cf4f9a0c03e2a2b9f32e91b697daf2ccfe81bbae9ac3046ce')
version('0.3-3', sha256='d065d0ee42fb772760fca8d97ad2aa56cd76b1d9ecb4e97478ec362429e16738')
version('0.3-2', sha256='5fcaf18324dc754152f528a44894944063303f780d33e58569ea7c306bfc45ac')
diff --git a/var/spack/repos/builtin/packages/r-splancs/package.py b/var/spack/repos/builtin/packages/r-splancs/package.py
index 0524b842a7..3cdf24c773 100644
--- a/var/spack/repos/builtin/packages/r-splancs/package.py
+++ b/var/spack/repos/builtin/packages/r-splancs/package.py
@@ -15,6 +15,7 @@ class RSplancs(RPackage):
cran = "splancs"
+ version('2.01-43', sha256='b351565e1f69f6c86a29d921d3a18d5896c4586e2ab8c73bb3df8e75630fc448')
version('2.01-42', sha256='8c0af4764521e20b629dba6afd5c284e7be48786f378c37668eacfa26d2ef0aa')
version('2.01-40', sha256='79744381ebc4a361740a36dca3c9fca9ae015cfe0bd585b7856a664a3da74363')
diff --git a/var/spack/repos/builtin/packages/r-stargazer/package.py b/var/spack/repos/builtin/packages/r-stargazer/package.py
index 05aa38bebd..bdca9bd9af 100644
--- a/var/spack/repos/builtin/packages/r-stargazer/package.py
+++ b/var/spack/repos/builtin/packages/r-stargazer/package.py
@@ -15,4 +15,5 @@ class RStargazer(RPackage):
cran = "stargazer"
+ version('5.2.3', sha256='208e9b48a11cf56ce142731c204f3d2bcb5b68719f84309a36362cd925414265')
version('5.2.2', sha256='70eb4a13a6ac1bfb35af07cb8a63d501ad38dfd9817fc3fba6724260b23932de')
diff --git a/var/spack/repos/builtin/packages/r-statnet-common/package.py b/var/spack/repos/builtin/packages/r-statnet-common/package.py
index 998f973482..41a1affc0b 100644
--- a/var/spack/repos/builtin/packages/r-statnet-common/package.py
+++ b/var/spack/repos/builtin/packages/r-statnet-common/package.py
@@ -14,6 +14,7 @@ class RStatnetCommon(RPackage):
cran = "statnet.common"
+ version('4.6.0', sha256='ddad51128b50d465e1d1aca3a53b452810b9ba578e96b08b8f50f5850d7bb21d')
version('4.5.0', sha256='3cdb23db86f3080462f15e29bcf3e941590bc17ea719993b301199b22d6f882f')
version('4.4.1', sha256='4ecf2b84718d7fb60f196215b4cf6f52cd6b26cc9148a6da6981b26e885509fd')
version('4.3.0', sha256='834a3359eac967df0420eee416ae4983e3b502a3de56bb24f494a7ca4104e959')
diff --git a/var/spack/repos/builtin/packages/r-stringfish/package.py b/var/spack/repos/builtin/packages/r-stringfish/package.py
index 6ec7288b13..34b26d5cae 100644
--- a/var/spack/repos/builtin/packages/r-stringfish/package.py
+++ b/var/spack/repos/builtin/packages/r-stringfish/package.py
@@ -16,6 +16,7 @@ class RStringfish(RPackage):
maintainers = ['dorton21']
+ version('0.15.7', sha256='34b1703a8876a40860d35f88a94e069832a7d2bc86189ff07af84ff04fd4b735')
version('0.15.5', sha256='9df21146a7710e5a9ab4bb53ebc231a580c798b7e541b8d78df53207283f8129')
version('0.14.2', sha256='9373cfc715cda1527fd20179435977b8e59e19d8c5ef82a31e519f93fb624ced')
@@ -23,4 +24,5 @@ class RStringfish(RPackage):
depends_on('r@3.0.2:', type=('build', 'run'), when='@0.15.5:')
depends_on('r-rcpp@0.12.18.3:', type=('build', 'run'))
depends_on('r-rcppparallel', type=('build', 'run'))
+ depends_on('r-rcppparallel@5.1.4:', type=('build', 'run'), when='@0.15.7:')
depends_on('gmake', type='build')
diff --git a/var/spack/repos/builtin/packages/r-styler/package.py b/var/spack/repos/builtin/packages/r-styler/package.py
index 90c00ea131..47e6d7788a 100644
--- a/var/spack/repos/builtin/packages/r-styler/package.py
+++ b/var/spack/repos/builtin/packages/r-styler/package.py
@@ -13,14 +13,16 @@ class RStyler(RPackage):
cran = "styler"
+ version('1.7.0', sha256='3e49f3ac2e65f9bdab15837a4e629db35c8fd0a15a74daa057354ba01e3022ce')
version('1.6.2', sha256='a62fcc76aac851069f33874f9eaabdd580973b619cfc625d6ec910476015f75c')
version('1.3.2', sha256='3fcf574382c607c2147479bad4f9fa8b823f54fb1462d19ec4a330e135a44ff1')
- depends_on('r-backports@1.1.0:', type=('build', 'run'))
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@1.7.0:')
depends_on('r-cli@1.1.0:', type=('build', 'run'))
- depends_on('r-glue', type=('build', 'run'), when='@1.6.2:')
+ depends_on('r-cli@3.1.1:', type=('build', 'run'), when='@1.7.0:')
depends_on('r-magrittr@1.0.1:', type=('build', 'run'))
depends_on('r-magrittr@2.0.0:', type=('build', 'run'), when='@1.6.2:')
+ depends_on('r-glue', type=('build', 'run'), when='@1.6.2:')
depends_on('r-purrr@0.2.3:', type=('build', 'run'))
depends_on('r-r-cache@0.14.0:', type=('build', 'run'))
depends_on('r-r-cache@0.15.0:', type=('build', 'run'), when='@1.6.2:')
@@ -29,4 +31,6 @@ class RStyler(RPackage):
depends_on('r-rprojroot@1.1:', type=('build', 'run'))
depends_on('r-tibble@1.4.2:', type=('build', 'run'))
depends_on('r-withr@1.0.0:', type=('build', 'run'))
- depends_on('r-xfun@0.1:', type=('build', 'run'))
+
+ depends_on('r-backports@1.1.0:', type=('build', 'run'), when='@:1.6.2')
+ depends_on('r-xfun@0.1:', type=('build', 'run'), when='@:1.6.2')
diff --git a/var/spack/repos/builtin/packages/r-subplex/package.py b/var/spack/repos/builtin/packages/r-subplex/package.py
index 6d125d022a..18694fa9ac 100644
--- a/var/spack/repos/builtin/packages/r-subplex/package.py
+++ b/var/spack/repos/builtin/packages/r-subplex/package.py
@@ -14,6 +14,7 @@ class RSubplex(RPackage):
cran = "subplex"
+ version('1.8', sha256='3bc31d8990380c9f790c9c7d84cb2e39f4945eff934eddfa1196d597465be5a5')
version('1.7', sha256='d5ecf4a484936d71cb294f08c3968ef5a8dcbdc861bfc0e97e3b1ab99afff887')
version('1.6', sha256='0d05da1622fffcd20a01cc929fc6c2b7df40a8246e7018f7f1f3c175b774cbf9')
version('1.5-4', sha256='ff94cf6b1560f78c31712c05bc2bc1b703339e09c7fc777ee94abf15fa7a8b81')
diff --git a/var/spack/repos/builtin/packages/r-survival/package.py b/var/spack/repos/builtin/packages/r-survival/package.py
index 6108f47e32..0e4b3c85d0 100644
--- a/var/spack/repos/builtin/packages/r-survival/package.py
+++ b/var/spack/repos/builtin/packages/r-survival/package.py
@@ -15,6 +15,7 @@ class RSurvival(RPackage):
cran = "survival"
+ version('3.3-1', sha256='14878705cd0c7edcfead79011444aa84f680759293bde8634721c49f37cb4dc7')
version('3.2-13', sha256='3fab9c0ba2c4e2b6a475207e2629a7f06a104c70093dfb768f50a7caac9a317f')
version('3.2-7', sha256='5356cd73da7ecfda4042e8a8ae00d3531b106f7b39ca31a1843eadf288418a46')
version('3.1-12', sha256='b62ed66eb646f3df13f7e9bf6571e3bfecae128c66491e174c8833cbef1bf21f')
diff --git a/var/spack/repos/builtin/packages/r-svglite/package.py b/var/spack/repos/builtin/packages/r-svglite/package.py
index 7546c617f9..bd96257243 100644
--- a/var/spack/repos/builtin/packages/r-svglite/package.py
+++ b/var/spack/repos/builtin/packages/r-svglite/package.py
@@ -14,6 +14,7 @@ class RSvglite(RPackage):
cran = "svglite"
+ version('2.1.0', sha256='ad40f590c7e80ae83001a3826b6e8394ba733446ed51fd55faeda974ab839c9b')
version('2.0.0', sha256='76e625fe172a5b7ce99a67b6d631b037b3f7f0021cfe15f2e15e8851b89defa5')
depends_on('r+X', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-systemfonts/package.py b/var/spack/repos/builtin/packages/r-systemfonts/package.py
index 5a35eeb732..a49e6a374d 100644
--- a/var/spack/repos/builtin/packages/r-systemfonts/package.py
+++ b/var/spack/repos/builtin/packages/r-systemfonts/package.py
@@ -19,6 +19,7 @@ class RSystemfonts(RPackage):
cran = "systemfonts"
+ version('1.0.4', sha256='ef766c75b942f147d382664a00d6a4930f1bfe0cce9d88943f571682a85a84c0')
version('1.0.3', sha256='647c99d5ea6f90a49768ea7b10b39816af6be85168475273369fd973a20dbbba')
version('1.0.1', sha256='401db4d9e78e3a5e00b7a0b4fbad7fbb1c584734469b65fe5b7ebe1851c7a797')
diff --git a/var/spack/repos/builtin/packages/r-tclust/package.py b/var/spack/repos/builtin/packages/r-tclust/package.py
index b1caf31d8e..a8190067e6 100644
--- a/var/spack/repos/builtin/packages/r-tclust/package.py
+++ b/var/spack/repos/builtin/packages/r-tclust/package.py
@@ -16,6 +16,7 @@ class RTclust(RPackage):
cran = "tclust"
+ version('1.5-1', sha256='73328b30774bb0767d613d7f2b60b75706b19fab864c712645ea18181f1af327')
version('1.4-2', sha256='95dcd07dbd16383f07f5cea8561e7f3bf314e4a7483879841103b149fc8c65d9')
version('1.4-1', sha256='4b0be612c8ecd7b4eb19a44ab6ac8f5d40515600ae1144c55989b6b41335ad9e')
version('1.3-1', sha256='fe4479a73b947d8f6c1cc63587283a8b6223d430d39eee4e5833a06d3d1726d2')
diff --git a/var/spack/repos/builtin/packages/r-testthat/package.py b/var/spack/repos/builtin/packages/r-testthat/package.py
index a2c8cd4fee..08cd5b61db 100644
--- a/var/spack/repos/builtin/packages/r-testthat/package.py
+++ b/var/spack/repos/builtin/packages/r-testthat/package.py
@@ -15,6 +15,7 @@ class RTestthat(RPackage):
cran = "testthat"
+ version('3.1.4', sha256='a47eec031b4e186a8bd331031371b2347063a283050eca2adbfaa37d7a6c9c09')
version('3.1.2', sha256='ed41a6168ca22869b6aebe1e5865bb2f5338a7c35ca0a13cf69ac2f5c6aeb659')
version('3.1.1', sha256='e6755fb4f5388751af952edfd555533bb55d6252606f6fcef07bdb6268c8cf80')
version('3.0.1', sha256='297fc45c719684f11ddf9dc9088f5528fdf9b44625165543384eaf579f243ad0')
@@ -28,6 +29,7 @@ class RTestthat(RPackage):
depends_on('r-callr@3.5.1:', type=('build', 'run'), when='@3.0.1:')
depends_on('r-cli', type=('build', 'run'), when='@2.0.0:')
depends_on('r-cli@2.2.0:', type=('build', 'run'), when='@3.0.1:')
+ depends_on('r-cli@3.3.0:', type=('build', 'run'), when='@3.1.4:')
depends_on('r-crayon@1.3.4:', type=('build', 'run'))
depends_on('r-desc', type=('build', 'run'), when='@3.0.1:')
depends_on('r-digest', type=('build', 'run'))
@@ -45,8 +47,10 @@ class RTestthat(RPackage):
depends_on('r-rlang@0.3.0:', type=('build', 'run'), when='@2.0.0:')
depends_on('r-rlang@0.4.1:', type=('build', 'run'), when='@2.3.2:')
depends_on('r-rlang@0.4.9:', type=('build', 'run'), when='@3.0.1:')
+ depends_on('r-rlang@1.0.1:', type=('build', 'run'), when='@3.1.4:')
depends_on('r-waldo@0.2.1:', type=('build', 'run'), when='@3.0.1:')
depends_on('r-waldo@0.2.4:', type=('build', 'run'), when='@3.1.1:')
+ depends_on('r-waldo@0.4.0:', type=('build', 'run'), when='@3.1.4:')
depends_on('r-withr@2.0.0:', type=('build', 'run'), when='@2.0.0:')
depends_on('r-withr@2.3.0:', type=('build', 'run'), when='@3.0.1:')
depends_on('r-withr@2.4.3:', type=('build', 'run'), when='@3.1.2:')
diff --git a/var/spack/repos/builtin/packages/r-th-data/package.py b/var/spack/repos/builtin/packages/r-th-data/package.py
index b3e95c8de3..704f9037cb 100644
--- a/var/spack/repos/builtin/packages/r-th-data/package.py
+++ b/var/spack/repos/builtin/packages/r-th-data/package.py
@@ -13,6 +13,7 @@ class RThData(RPackage):
cran = "TH.data"
+ version('1.1-1', sha256='edf3ab16b142f4c52d21fc64e41409ed138e5b3e142f2fae964b00f02d53dd7a')
version('1.1-0', sha256='21b37e251da5635ae91668f64b4c6f6a7ccedbe1f01af769d30fb532af83113e')
version('1.0-10', sha256='618a1c67a30536d54b1e48ba3af46a6edcd6c2abef17935b5d4ba526a43aff55')
version('1.0-9', sha256='d8318a172ce2b9f7f284dc297c8a8d5093de8eccbb566c8e7580e70938dfae0f')
diff --git a/var/spack/repos/builtin/packages/r-tibble/package.py b/var/spack/repos/builtin/packages/r-tibble/package.py
index c2ba5523a7..2030c4162a 100644
--- a/var/spack/repos/builtin/packages/r-tibble/package.py
+++ b/var/spack/repos/builtin/packages/r-tibble/package.py
@@ -14,6 +14,7 @@ class RTibble(RPackage):
cran = "tibble"
+ version('3.1.7', sha256='e1a50891f476803526960b4c4d736a72e7d9c3d366946744a02d6347f591c872')
version('3.1.6', sha256='5b33d909f146ebad38e262f6a57cb91ab70bfe240c2af01004beec11b3898292')
version('3.1.5', sha256='da6387ba683a67cd7fc2a111f6b62468e480a8078bc1867d433a40c5460edbe7')
version('3.0.5', sha256='1cc92d7bf5ecf8291718682fb7fcb96f6f87751f1ed101a7441cad5120195190')
@@ -38,9 +39,11 @@ class RTibble(RPackage):
depends_on('r-pillar@1.4.3:', type=('build', 'run'), when='@3.0.5:')
depends_on('r-pillar@1.6.0:', type=('build', 'run'), when='@3.1.0:')
depends_on('r-pillar@1.6.2:', type=('build', 'run'), when='@3.1.4:')
+ depends_on('r-pillar@1.7.0:', type=('build', 'run'), when='@3.1.7:')
depends_on('r-pkgconfig', type=('build', 'run'), when='@2.0.0:')
depends_on('r-rlang@0.3.0:', type=('build', 'run'), when='@1.3.1:')
depends_on('r-rlang@0.4.3:', type=('build', 'run'), when='@3.0.5:')
+ depends_on('r-rlang@1.0.1:', type=('build', 'run'), when='@3.1.7:')
depends_on('r-vctrs@0.3.2:', type=('build', 'run'), when='@3.0.5:')
depends_on('r-vctrs@0.3.8:', type=('build', 'run'), when='@3.1.2:')
diff --git a/var/spack/repos/builtin/packages/r-tidycensus/package.py b/var/spack/repos/builtin/packages/r-tidycensus/package.py
index 0da25c22cb..64399faefc 100644
--- a/var/spack/repos/builtin/packages/r-tidycensus/package.py
+++ b/var/spack/repos/builtin/packages/r-tidycensus/package.py
@@ -18,6 +18,8 @@ class RTidycensus(RPackage):
cran = "tidycensus"
+ version('1.2.2', sha256='5cdbb92314061c9d8d3d62f623699fa115d7faae1f4a961d55ab905538f8e7cc')
+ version('1.2.1', sha256='b42f113c7925f8ad350f24077f6ed4d2c31d5fff45efd94639109478174a396c')
version('1.1', sha256='8914fdec64a86896f1faa3a92272d1cd008a194af4cd86eba2d69df5707062c0')
version('0.11', sha256='da2fba4cd987615dedd22f64d9f38804f4e2161af31bacf1f3b5a013d71fdd43')
version('0.9.2', sha256='2454525301caff9eaaf6ebe14f58706ece1fbace6187ce8bf3fff04c842b9536')
@@ -42,3 +44,4 @@ class RTidycensus(RPackage):
depends_on('r-units', type=('build', 'run'))
depends_on('r-rlang', type=('build', 'run'), when='@0.11:')
depends_on('r-crayon', type=('build', 'run'), when='@1.1:')
+ depends_on('r-tidyselect', type=('build', 'run'), when='@1.2.1:')
diff --git a/var/spack/repos/builtin/packages/r-tidygraph/package.py b/var/spack/repos/builtin/packages/r-tidygraph/package.py
index 09c22942d7..d75e31c406 100644
--- a/var/spack/repos/builtin/packages/r-tidygraph/package.py
+++ b/var/spack/repos/builtin/packages/r-tidygraph/package.py
@@ -17,6 +17,7 @@ class RTidygraph(RPackage):
cran = "tidygraph"
+ version('1.2.1', sha256='2fbdc2db18c5ad48c72f14d2d04111f4b0d4c434ad87c280eda3bcb98673ad36')
version('1.2.0', sha256='057d6c42fc0144109f3ace7f5058cca7b2fe493c761daa991448b23f86b6129f')
version('1.1.2', sha256='5642001d4cccb122d66481b7c61a06c724c02007cbd356ee61cb29726a56fafe')
@@ -27,6 +28,9 @@ class RTidygraph(RPackage):
depends_on('r-magrittr', type=('build', 'run'))
depends_on('r-rlang', type=('build', 'run'))
depends_on('r-r6', type=('build', 'run'))
- depends_on('r-rcpp', type=('build', 'run'))
depends_on('r-tidyr', type=('build', 'run'))
depends_on('r-pillar', type=('build', 'run'))
+ depends_on('r-cli', type=('build', 'run'), when='@1.2.1:')
+ depends_on('r-cpp11', type=('build', 'run'), when='@1.2.1:')
+
+ depends_on('r-rcpp', type=('build', 'run'), when='@:1.2.0')
diff --git a/var/spack/repos/builtin/packages/r-tidyr/package.py b/var/spack/repos/builtin/packages/r-tidyr/package.py
index 9703540d3e..9a2c62cbee 100644
--- a/var/spack/repos/builtin/packages/r-tidyr/package.py
+++ b/var/spack/repos/builtin/packages/r-tidyr/package.py
@@ -19,6 +19,7 @@ class RTidyr(RPackage):
cran = "tidyr"
+ version('1.2.0', sha256='8cd01da9e97827521d01ea50b9225f2705c46b7538bbf74bec6249a04c1213a8')
version('1.1.4', sha256='0b0c98be98a433e15a2550f60330b31a58529a9c58bc2abd7bff6462ab761241')
version('1.1.2', sha256='08fccb67824515b33187886f3ca2cf2fe747a778514892dbbf5e565edf0dfd6c')
version('0.8.3', sha256='a18f54ec35124110058ab23f7e0a3c037a8d50f0405520cf5cc5443ec022cc37')
@@ -29,6 +30,7 @@ class RTidyr(RPackage):
depends_on('r@3.1:', type=('build', 'run'))
depends_on('r-dplyr@0.7.0:', type=('build', 'run'))
depends_on('r-dplyr@0.8.2:', type=('build', 'run'), when='@1.1.2:')
+ depends_on('r-dplyr@1.0.0:', type=('build', 'run'), when='@1.2.0:')
depends_on('r-ellipsis@0.1.0:', type=('build', 'run'), when='@1.1.2:')
depends_on('r-glue', type=('build', 'run'))
depends_on('r-lifecycle', type=('build', 'run'), when='@1.1.2:')
@@ -41,8 +43,10 @@ class RTidyr(RPackage):
depends_on('r-tidyselect@1.1.0:', type=('build', 'run'), when='@1.1.2:')
depends_on('r-vctrs@0.3.0:', type=('build', 'run'), when='@1.1.2:')
depends_on('r-vctrs@0.3.6:', type=('build', 'run'), when='@1.1.3:')
+ depends_on('r-vctrs@0.3.7:', type=('build', 'run'), when='@1.2.0:')
depends_on('r-cpp11@0.2.1:', type=('build', 'run'), when='@1.1.2:')
depends_on('r-cpp11@0.2.6:', type=('build', 'run'), when='@1.1.3:')
+ depends_on('r-cpp11@0.4.0:', type=('build', 'run'), when='@1.2.0:')
depends_on('r-stringi', type=('build', 'run'), when='@:0.8.3')
depends_on('r-rcpp', type=('build', 'run'), when='@:0.8.3')
diff --git a/var/spack/repos/builtin/packages/r-tidyselect/package.py b/var/spack/repos/builtin/packages/r-tidyselect/package.py
index adabdd6d40..c9914ab2d6 100644
--- a/var/spack/repos/builtin/packages/r-tidyselect/package.py
+++ b/var/spack/repos/builtin/packages/r-tidyselect/package.py
@@ -15,6 +15,7 @@ class RTidyselect(RPackage):
cran = "tidyselect"
+ version('1.1.2', sha256='0389a3b15417954a30d6d692f6ebdd3d0f318cb94a5c9b05365df2f4ea1d8270')
version('1.1.1', sha256='18eb6a6746196a81ce19ee6cbf1db0c33f494177b97e2419312ef25a00ae486b')
version('1.1.0', sha256='e635ed381fb53f7a53c3fa36bb33e134a3273d272367de2a8d909c821be93893')
version('0.2.5', sha256='5ce2e86230fa35cfc09aa71dcdd6e05e1554a5739c863ca354d241bfccb86c74')
@@ -29,6 +30,7 @@ class RTidyselect(RPackage):
depends_on('r-purrr@0.3.2:', type=('build', 'run'), when='@1.1.0:')
depends_on('r-rlang@0.2.2:', type=('build', 'run'))
depends_on('r-rlang@0.4.6:', type=('build', 'run'), when='@1.1.0:')
+ depends_on('r-rlang@1.0.1:', type=('build', 'run'), when='@1.1.2:')
depends_on('r-vctrs@0.2.2:', type=('build', 'run'), when='@1.1.0:')
depends_on('r-vctrs@0.3.0:', type=('build', 'run'), when='@1.1.1:')
diff --git a/var/spack/repos/builtin/packages/r-tidytree/package.py b/var/spack/repos/builtin/packages/r-tidytree/package.py
index 4e7b4b4259..d4554172ae 100644
--- a/var/spack/repos/builtin/packages/r-tidytree/package.py
+++ b/var/spack/repos/builtin/packages/r-tidytree/package.py
@@ -16,6 +16,7 @@ class RTidytree(RPackage):
cran = "tidytree"
+ version('0.3.9', sha256='12435d4f4c4d734b2a758cb13eb3b44bdfa8fdfa79a6e81fb99f7ce3a5d82edf')
version('0.3.7', sha256='7816f2d48ec94ca0c1bef15ec3d536adf44a969ea3c3cfc203ceebe16808e4f2')
depends_on('r@3.4.0:', type=('build', 'run'))
@@ -28,3 +29,4 @@ class RTidytree(RPackage):
depends_on('r-tidyr', type=('build', 'run'))
depends_on('r-tidyselect', type=('build', 'run'))
depends_on('r-yulab-utils@0.0.4:', type=('build', 'run'))
+ depends_on('r-pillar', type=('build', 'run'), when='@0.3.9:')
diff --git a/var/spack/repos/builtin/packages/r-tigris/package.py b/var/spack/repos/builtin/packages/r-tigris/package.py
index abb556b4c3..fa6b1d5ad7 100644
--- a/var/spack/repos/builtin/packages/r-tigris/package.py
+++ b/var/spack/repos/builtin/packages/r-tigris/package.py
@@ -14,6 +14,8 @@ class RTigris(RPackage):
cran = "tigris"
+ version('1.6.1', sha256='927e8da3f7120bcc10f0b4ded95687512693e069f082eea7aea6302a2f1b2db2')
+ version('1.6', sha256='fa14fbbaf44f5ade1cc92e6e4e4ed2e775bc7c106310711d16b0135a948a1661')
version('1.5', sha256='5ef71ca83817ad6b97ee86d1e560e8e86ee21bdcb1807ce40c945b3213c04472')
version('1.0', sha256='97c76568c7cf0615abcbf923a0b4387f6b8c1915b9eb42d0c34cb0f707654403')
version('0.8.2', sha256='ed8d6ab25332c2cc800858d58324bd8264772d8a916a3f0a8d489250a7e7140e')
diff --git a/var/spack/repos/builtin/packages/r-tinytex/package.py b/var/spack/repos/builtin/packages/r-tinytex/package.py
index 54138e5af7..ea8474879a 100644
--- a/var/spack/repos/builtin/packages/r-tinytex/package.py
+++ b/var/spack/repos/builtin/packages/r-tinytex/package.py
@@ -18,6 +18,7 @@ class RTinytex(RPackage):
cran = "tinytex"
+ version('0.39', sha256='f22e9b77c200fe44cc073b759c2b2bc3310a2382d897282548aa02dcbabc25ed')
version('0.37', sha256='2f4f330711fd6cd96927c18f2f649487b8a83a06ed04b5928a0067163e7948d9')
version('0.36', sha256='65e6c1b981686573dd406e97b9639224cc2640d55a59d6381360449f10763b78')
version('0.32', sha256='70fa28195ae6c8b8d43790205b49745c5a062aab78e64cec39bfbe5ed604c29f')
diff --git a/var/spack/repos/builtin/packages/r-truncnorm/package.py b/var/spack/repos/builtin/packages/r-truncnorm/package.py
index 8509e1b787..cdf8877a22 100644
--- a/var/spack/repos/builtin/packages/r-truncnorm/package.py
+++ b/var/spack/repos/builtin/packages/r-truncnorm/package.py
@@ -15,5 +15,7 @@ class RTruncnorm(RPackage):
cran = "truncnorm"
version('1.0-8', sha256='49564e8d87063cf9610201fbc833859ed01935cc0581b9e21c42a0d21a47c87e')
+ version('1.0.0', sha256='dc1b018cb6d9ad5beb2d9e2f3ebe56c3f69d7a98fc5a1d963dd7933d209ac272')
- depends_on('r@3.4.0:', type=('build', 'run'))
+ depends_on('r@2.7.0:', type=('build', 'run'))
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@1.0-8:')
diff --git a/var/spack/repos/builtin/packages/r-tseries/package.py b/var/spack/repos/builtin/packages/r-tseries/package.py
index 28019efbc9..ef1b160fc0 100644
--- a/var/spack/repos/builtin/packages/r-tseries/package.py
+++ b/var/spack/repos/builtin/packages/r-tseries/package.py
@@ -11,6 +11,7 @@ class RTseries(RPackage):
cran = "tseries"
+ version('0.10-51', sha256='a55f20704883710ab58ea479e20cf0f263c50d54282f693793cda4af664c207f')
version('0.10-49', sha256='45bf26d8f41f12a72954bbe5fb6f4da6cc4ef29ee075c49fe7cc8456926c14ba')
version('0.10-48', sha256='53bd22708c936205c5f839a10f2e302524d2cc54dc309e7d885ebd081ccb4471')
version('0.10-47', sha256='202377df56806fe611c2e12c4d9732c71b71220726e2defa7e568d2b5b62fb7b')
diff --git a/var/spack/repos/builtin/packages/r-tsne/package.py b/var/spack/repos/builtin/packages/r-tsne/package.py
index fbbc2d6d36..0e56746905 100644
--- a/var/spack/repos/builtin/packages/r-tsne/package.py
+++ b/var/spack/repos/builtin/packages/r-tsne/package.py
@@ -13,6 +13,7 @@ class RTsne(RPackage):
cran = "tsne"
+ version('0.1-3.1', sha256='14abc65bc0a3f3ed63c04dda19620e483a21d1f5f33feb74aba9f3221434d888')
version('0.1-3', sha256='66fdf5d73e69594af529a9c4f261d972872b9b7bffd19f85c1adcd66afd80c69')
version('0.1-2', sha256='c6c3455e0f0f5dcac14299b3dfeb1a5f1bfe5623cdaf602afc892491d3d1058b')
version('0.1-1', sha256='c953991215a660cf144e55848d2507bcf7932618e164b0e56901fb33831fd1d3')
diff --git a/var/spack/repos/builtin/packages/r-tzdb/package.py b/var/spack/repos/builtin/packages/r-tzdb/package.py
index f55262b19e..235481d7f5 100644
--- a/var/spack/repos/builtin/packages/r-tzdb/package.py
+++ b/var/spack/repos/builtin/packages/r-tzdb/package.py
@@ -21,7 +21,10 @@ class RTzdb(RPackage):
cran = "tzdb"
+ version('0.3.0', sha256='6099f0ec1fba692b51b4360aa776902a39f10dae815933c31994b8e4d4277038')
version('0.2.0', sha256='c335905d452b400af7ed54b916b5246cb3f47ede0602911a2bcb25a1cf56d5a9')
depends_on('r@3.3:', type=('build', 'run'))
+ depends_on('r@3.4.0:', type=('build', 'run'), when='@0.3.0:')
depends_on('r-cpp11@0.4.0:', type=('build', 'run'))
+ depends_on('r-cpp11@0.4.2:', type=('build', 'run'), when='@0.3.0:')
diff --git a/var/spack/repos/builtin/packages/r-udunits2/package.py b/var/spack/repos/builtin/packages/r-udunits2/package.py
index 897f6228e5..09d5139627 100644
--- a/var/spack/repos/builtin/packages/r-udunits2/package.py
+++ b/var/spack/repos/builtin/packages/r-udunits2/package.py
@@ -13,6 +13,7 @@ class RUdunits2(RPackage):
cran = "udunits2"
+ version('0.13.2.1', sha256='9f5429c04a24930f7d037d506e5b154b6154df69247dcdaa6261075291d7f902')
version('0.13.2', sha256='ee00898801b3282717cba40a9ef930515506386aa82a050356d1a9c80a9f5969')
version('0.13', sha256='d155d3c07f6202b65dec4075ffd1e1c3f4f35f5fdece8cfb319d39256a3e5b79')
diff --git a/var/spack/repos/builtin/packages/r-usethis/package.py b/var/spack/repos/builtin/packages/r-usethis/package.py
index 0dc724aa82..c3fcce37bd 100644
--- a/var/spack/repos/builtin/packages/r-usethis/package.py
+++ b/var/spack/repos/builtin/packages/r-usethis/package.py
@@ -16,6 +16,7 @@ class RUsethis(RPackage):
cran = "usethis"
+ version('2.1.6', sha256='31dc6707577065ac1d4acb7d4cbf135942727c5cc2699092198c544be86f6818')
version('2.1.5', sha256='7d539e16ecdc1cd45ba1a215d42d8b9c16bc38280ddd27048003dbb37b16f052')
version('2.0.0', sha256='22aa2b59f36a8701a4648554c7b0e010253bf917a0f431f06efac7d8a6b59854')
version('1.6.1', sha256='60339059a97ed07dea7f8908b828b5bb42e0fd0b471165c061bc9660b0d59d6f')
@@ -46,6 +47,7 @@ class RUsethis(RPackage):
depends_on('r-rlang', type=('build', 'run'))
depends_on('r-rlang@0.4.3:', type=('build', 'run'), when='@1.6.1:')
depends_on('r-rlang@0.4.10:', type=('build', 'run'), when='@2.1.5:')
+ depends_on('r-rlang@1.0.0:', type=('build', 'run'), when='@2.1.6:')
depends_on('r-rprojroot@1.2:', type=('build', 'run'))
depends_on('r-rstudioapi', type=('build', 'run'))
depends_on('r-whisker', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-uuid/package.py b/var/spack/repos/builtin/packages/r-uuid/package.py
index 766515018f..f18fbd5ca9 100644
--- a/var/spack/repos/builtin/packages/r-uuid/package.py
+++ b/var/spack/repos/builtin/packages/r-uuid/package.py
@@ -15,6 +15,7 @@ class RUuid(RPackage):
cran = "uuid"
+ version('1.1-0', sha256='e75b50ee7dc8c4c8e7083023e954ffd1c6a004431bf5e9094463e46aa760f42f')
version('1.0-3', sha256='456e4633659f20242fd7cd585ad005a3e07265f1d1db383fca6794c8ac2c8346')
version('0.1-4', sha256='98e0249dda17434bfa209c2058e9911e576963d4599be9f7ea946e664f8ca93e')
version('0.1-2', sha256='dd71704dc336b0857981b92a75ed9877d4ca47780b1682def28839304cd3b1be')
diff --git a/var/spack/repos/builtin/packages/r-v8/package.py b/var/spack/repos/builtin/packages/r-v8/package.py
index 996325cfc3..6e65c8e45b 100644
--- a/var/spack/repos/builtin/packages/r-v8/package.py
+++ b/var/spack/repos/builtin/packages/r-v8/package.py
@@ -15,6 +15,7 @@ class RV8(RPackage):
cran = "V8"
+ version('4.2.0', sha256='6c62fdc974cc30fa975cad4ccb1e3796112fc2490a807f6e3d7878c3a5544743')
version('4.0.0', sha256='146a4cb671264f865ac2f2e35bfdfb37e2df70e4f6784354fb6e8a80a19dbbc8')
version('3.6.0', sha256='a3969898bf4a7c13d3130fae0d385cd048d46372ff4a412917b914b159261377')
version('3.4.0', sha256='f5c8a2a03cc1be9f504f47711a0fcd1b962745139c9fb2a10fbd79c4ae103fbd',
diff --git a/var/spack/repos/builtin/packages/r-vctrs/package.py b/var/spack/repos/builtin/packages/r-vctrs/package.py
index 4447091e91..e068084a5f 100644
--- a/var/spack/repos/builtin/packages/r-vctrs/package.py
+++ b/var/spack/repos/builtin/packages/r-vctrs/package.py
@@ -16,6 +16,7 @@ class RVctrs(RPackage):
cran = "vctrs"
+ version('0.4.1', sha256='9676881e009aa1217818f326338e8b35dd9a9438918f8b1ac249f4c8afe460dd')
version('0.3.8', sha256='7f4e8b75eda115e69dddf714f0643eb889ad61017cdc13af24389aab2a2d1bb1')
version('0.3.6', sha256='df7d368c9f2d2ad14872ba2a09821ec4f5a8ad77c81a0b05e1f440e5ffebad25')
version('0.3.5', sha256='11605d98106e294dae1a9b205462dd3906a6159a647150752b85dd290f6635cc')
@@ -23,11 +24,13 @@ class RVctrs(RPackage):
depends_on('r@3.2:', type=('build', 'run'))
depends_on('r@3.3:', type=('build', 'run'), when='@0.3.5:')
- depends_on('r-ellipsis@0.2.0:', type=('build', 'run'))
+ depends_on('r-cli@3.2.0:', type=('build', 'run'), when='@0.4.1:')
depends_on('r-glue', type=('build', 'run'))
depends_on('r-rlang@0.4.0:', type=('build', 'run'))
depends_on('r-rlang@0.4.7:', type=('build', 'run'), when='@0.3.5:')
depends_on('r-rlang@0.4.10:', type=('build', 'run'), when='@0.3.7:')
+ depends_on('r-rlang@1.0.0:', type=('build', 'run'), when='@0.4.1:')
depends_on('r-digest', type=('build', 'run'), when='@:0.3.6')
depends_on('r-zeallot', type=('build', 'run'), when='@:0.2.0')
+ depends_on('r-ellipsis@0.2.0:', type=('build', 'run'), when='@:0.3.8')
diff --git a/var/spack/repos/builtin/packages/r-vegan/package.py b/var/spack/repos/builtin/packages/r-vegan/package.py
index 8d642329ac..f43cb612bd 100644
--- a/var/spack/repos/builtin/packages/r-vegan/package.py
+++ b/var/spack/repos/builtin/packages/r-vegan/package.py
@@ -14,6 +14,7 @@ class RVegan(RPackage):
cran = "vegan"
+ version('2.6-2', sha256='ab77d110c959d19b0c6268ae0c8f78c897e2419eff3f1f7b19c1bb2f8db7c059')
version('2.5-7', sha256='e63b586951ea7d8b0118811f329c700212892ec1db3b93951603ce1d68aa462a')
version('2.5-5', sha256='876b5266f29f3034fed881020d16f476e62d145a00cb450a1a213e019e056971')
version('2.5-4', sha256='5116a440111fca49b5f95cfe888b180ff29a112e6301d5e2ac5cae0e628493e0')
diff --git a/var/spack/repos/builtin/packages/r-vgam/package.py b/var/spack/repos/builtin/packages/r-vgam/package.py
index c69b2eb7d1..7903d77c2e 100644
--- a/var/spack/repos/builtin/packages/r-vgam/package.py
+++ b/var/spack/repos/builtin/packages/r-vgam/package.py
@@ -28,6 +28,7 @@ class RVgam(RPackage):
cran = "VGAM"
+ version('1.1-6', sha256='446a61bac5dd4794e05d20c2f3901eec54afac52c6e23ce2787c5575170dd417')
version('1.1-5', sha256='30190b150f3e5478137d288a45f575b2654ad7c29254b0a1fe5c954ee010a1bb')
version('1.1-1', sha256='de192bd65a7e8818728008de8e60e6dd3b61a13616c887a43e0ccc8147c7da52')
version('1.0-6', sha256='121820a167411e847b41bdcb0028b55842d0ccc0c3471755c67449837e0fe3b9')
diff --git a/var/spack/repos/builtin/packages/r-waldo/package.py b/var/spack/repos/builtin/packages/r-waldo/package.py
index ee25addfc2..71613026a4 100644
--- a/var/spack/repos/builtin/packages/r-waldo/package.py
+++ b/var/spack/repos/builtin/packages/r-waldo/package.py
@@ -15,6 +15,7 @@ class RWaldo(RPackage):
cran = "waldo"
+ version('0.4.0', sha256='57ee89eec9bcbba58cf8fa29c8e097f038768c30833eaf812682826333127eaa')
version('0.3.1', sha256='ec2c8c1afbc413f8db8b6b0c6970194a875f616ad18e1e72a004bc4497ec019b')
version('0.2.3', sha256='1fbab22fe9be6ca8caa3df7306c763d7025d81ab6f17b85daaf8bdc8c9455c53')
@@ -26,4 +27,5 @@ class RWaldo(RPackage):
depends_on('r-rematch2', type=('build', 'run'))
depends_on('r-rlang', type=('build', 'run'))
depends_on('r-rlang@0.4.10:', type=('build', 'run'), when='@0.3.1:')
+ depends_on('r-rlang@1.0.0:', type=('build', 'run'), when='@0.4.0:')
depends_on('r-tibble', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/r-webshot/package.py b/var/spack/repos/builtin/packages/r-webshot/package.py
index 9c3699298c..806ffa5a90 100644
--- a/var/spack/repos/builtin/packages/r-webshot/package.py
+++ b/var/spack/repos/builtin/packages/r-webshot/package.py
@@ -14,6 +14,7 @@ class RWebshot(RPackage):
cran = "webshot"
+ version('0.5.3', sha256='b7c4f2be61c8c4730202a9c3604072478e30cb85b423b7497cd703cc3f49dbc0')
version('0.5.2', sha256='f183dc970157075b51ac543550a7a48fa3428b9c6838abb72fe987c21982043f')
version('0.5.1', sha256='b9750d206c6fa0f1f16cc212b0a34f4f4bfa916962d2c877f0ee9a33620f4b23')
diff --git a/var/spack/repos/builtin/packages/r-wgcna/package.py b/var/spack/repos/builtin/packages/r-wgcna/package.py
index 3cbf5b7f85..f81cce8b51 100644
--- a/var/spack/repos/builtin/packages/r-wgcna/package.py
+++ b/var/spack/repos/builtin/packages/r-wgcna/package.py
@@ -20,6 +20,7 @@ class RWgcna(RPackage):
cran = "WGCNA"
+ version('1.71', sha256='21f5349e888ea76241912600ee5c35a0d2fd50180568b9b08b2b597f099bf708')
version('1.70-3', sha256='b9843b839728183af6b746f239e9519d438b294613362b556002acdb8522cbd4')
version('1.69', sha256='2ea152d45b2d4f0e40b4b9f7b5ea8a96e230f7744ece8be27bdba96cf39d5008')
version('1.68', sha256='0a04f15a20817f9260ae1896eda3be83a7f4855a27a348df85c7f4d376f1efe8')
diff --git a/var/spack/repos/builtin/packages/r-withr/package.py b/var/spack/repos/builtin/packages/r-withr/package.py
index 77481ad1e7..165cb03423 100644
--- a/var/spack/repos/builtin/packages/r-withr/package.py
+++ b/var/spack/repos/builtin/packages/r-withr/package.py
@@ -16,6 +16,7 @@ class RWithr(RPackage):
cran = "withr"
+ version('2.5.0', sha256='37317b3ed790a08407072993a05ab255f6305f95a12a16e0e28aa6aa80fc8bc0')
version('2.4.3', sha256='9bdac7459ccc6c2d599ecfd132a7f0aa68d958942d9fe7dbb0442c9eda129d4c')
version('2.4.2', sha256='48f96a4cb780cf6fd5fbbea1f1eb04ea3102d7a4a644cae1ed1e91139dcbbac8')
version('2.4.0', sha256='ede4cdc7e4d17e0ad24afc9fb940cba46fac4421d3a39281e9918377d73714f8')
diff --git a/var/spack/repos/builtin/packages/r-xfun/package.py b/var/spack/repos/builtin/packages/r-xfun/package.py
index d5f96cb3e8..d9b7173123 100644
--- a/var/spack/repos/builtin/packages/r-xfun/package.py
+++ b/var/spack/repos/builtin/packages/r-xfun/package.py
@@ -14,6 +14,7 @@ class RXfun(RPackage):
cran = "xfun"
+ version('0.31', sha256='d169f3e682dab0c3f2ca381f2dba9b7014a5e2ca3d6863dbae3d1bca699ef235')
version('0.29', sha256='bf85bb7b4653d03e0730682ffe1d6d3544ac0b36989f9196b2054d356c224ef4')
version('0.24', sha256='e3e39a95202f6db4f6de3a8b9a344074a4944a3a8a522d44971390c905e2b583')
version('0.20', sha256='284239d12a3d5ea7d1ef8b1382fb0a7a4661af54c85510501279681871da7c10')
diff --git a/var/spack/repos/builtin/packages/r-xgboost/package.py b/var/spack/repos/builtin/packages/r-xgboost/package.py
index 6a2c94d113..edaec560a0 100644
--- a/var/spack/repos/builtin/packages/r-xgboost/package.py
+++ b/var/spack/repos/builtin/packages/r-xgboost/package.py
@@ -21,6 +21,7 @@ class RXgboost(RPackage):
cran = "xgboost"
+ version('1.6.0.1', sha256='9ae99a20997e1b02ffd21cabada2a55e53f5754746238ee900de5eb6cd964ebd')
version('1.5.0.2', sha256='4750b9a289d8cb685291939eed7c493bb42c5cc154ef98e13100abb1727eab13')
version('1.3.2.1', sha256='2ff462b81ad51a4810bd7860cb014b9b88831a8b1d45774249a808547147f884')
version('0.90.0.2', sha256='240584c1b4d54a95b4fef9074480752fae9a5b096e8f84747457d641decfc9bf')
diff --git a/var/spack/repos/builtin/packages/r-xml/package.py b/var/spack/repos/builtin/packages/r-xml/package.py
index 5b06679e46..0cd12c5a62 100644
--- a/var/spack/repos/builtin/packages/r-xml/package.py
+++ b/var/spack/repos/builtin/packages/r-xml/package.py
@@ -15,6 +15,7 @@ class RXml(RPackage):
cran = "XML"
+ version('3.99-0.9', sha256='9c15dedf3157efc59e0db31506631dfe770a4d397ce52f972434bed60e206a09')
version('3.99-0.8', sha256='081f691c2ee8ad39c7c95281e7d9153ec04cee79ca2d41f5d82c2ec2f1d36b50')
version('3.99-0.5', sha256='60529b7360f162eba07da455eeb9b94a732b2dd623c49e0f04328a2e97bd53a6')
version('3.98-1.20', sha256='46af86376ea9a0fb1b440cf0acdf9b89178686a05c4b77728fcff1f023aa4858')
diff --git a/var/spack/repos/builtin/packages/r-zcompositions/package.py b/var/spack/repos/builtin/packages/r-zcompositions/package.py
index 79a6cb4b5c..bd12f2381c 100644
--- a/var/spack/repos/builtin/packages/r-zcompositions/package.py
+++ b/var/spack/repos/builtin/packages/r-zcompositions/package.py
@@ -16,6 +16,7 @@ class RZcompositions(RPackage):
cran = "zCompositions"
+ version('1.4.0-1', sha256='33ee11f635cb87cc9c0617e1cfc91f1ac41c6cfe2b70fc441e226015939230e7')
version('1.4.0', sha256='a00d7d0ba861988b1836e947fd521d58137a4def04a5d7aa73a099314b7e530c')
version('1.3.4', sha256='ae22c86fe92368a26265933f42eecc518b9b69e7d9b698bc31bfaabfc3c48e95')
diff --git a/var/spack/repos/builtin/packages/r-zoo/package.py b/var/spack/repos/builtin/packages/r-zoo/package.py
index 1a484db62a..eec59c30b3 100644
--- a/var/spack/repos/builtin/packages/r-zoo/package.py
+++ b/var/spack/repos/builtin/packages/r-zoo/package.py
@@ -18,6 +18,7 @@ class RZoo(RPackage):
cran = "zoo"
+ version('1.8-10', sha256='c9a282d8004c22651c4fa1d657d3cad946c5ec55c4dc068569d860ee9b31ed47')
version('1.8-9', sha256='b7be259067a8b9d4a8f5d387e0946a5ba1eb43474baa67ccf4f8bf4b15f772a3')
version('1.8-8', sha256='4e8cc4065047ba12e103b9664f3b607c770673096e9c2b694fad2b2ec3203ce7')
version('1.8-6', sha256='2217a4f362f2201443b5fdbfd9a77d9a6caeecb05f02d703ee8b3b9bf2af37cc')