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| -rw-r--r-- | var/spack/repos/builtin/packages/telocal/package.py | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/telocal/package.py b/var/spack/repos/builtin/packages/telocal/package.py new file mode 100644 index 0000000000..2b7e9437b4 --- /dev/null +++ b/var/spack/repos/builtin/packages/telocal/package.py @@ -0,0 +1,21 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Telocal(PythonPackage): + """A package for quantifying transposable elements at a locus level for RNAseq datasets""" + + homepage = "https://hammelllab.labsites.cshl.edu/software/#TElocal" + + url = "https://github.com/mhammell-laboratory/TElocal/archive/refs/tags/1.1.2.tar.gz" + + license("GPL-3.0-only", checked_by="A_N_Other") + + version("1.1.2", sha256="d0c7d419d7df06dedbdffbf316fe01fa7324994e0fe1c4ea721835ec9b3e9bb5") + + depends_on("py-setuptools", type="build") + depends_on("py-pysam@0.9:", type=("build", "run")) |