diff options
34 files changed, 68 insertions, 36 deletions
diff --git a/lib/spack/spack/build_environment.py b/lib/spack/spack/build_environment.py index 9fbf0536a4..9b5ed367d1 100644 --- a/lib/spack/spack/build_environment.py +++ b/lib/spack/spack/build_environment.py @@ -494,7 +494,8 @@ def fork(pkg, function, dirty=False): If something goes wrong, the child process is expected to print the error and the parent process will exit with error as well. If things go well, the child exits and the parent - carries on.""" + carries on. + """ try: pid = os.fork() diff --git a/lib/spack/spack/config.py b/lib/spack/spack/config.py index ebddfb328f..dec43726a0 100644 --- a/lib/spack/spack/config.py +++ b/lib/spack/spack/config.py @@ -117,7 +117,8 @@ a key in a configuration file. For example, this:: ... Will make Spack take compilers *only* from the user configuration, and -the site configuration will be ignored.""" +the site configuration will be ignored. +""" import copy import os diff --git a/lib/spack/spack/environment.py b/lib/spack/spack/environment.py index 64863510c3..b0eadef7a6 100644 --- a/lib/spack/spack/environment.py +++ b/lib/spack/spack/environment.py @@ -266,7 +266,8 @@ class EnvironmentModifications(object): parameters :param \*args: list of files to be sourced - :rtype: instance of EnvironmentModifications""" + :rtype: instance of EnvironmentModifications + """ env = EnvironmentModifications() # Check if the files are actually there diff --git a/lib/spack/spack/mirror.py b/lib/spack/spack/mirror.py index 1e759848ea..2361fb5448 100644 --- a/lib/spack/spack/mirror.py +++ b/lib/spack/spack/mirror.py @@ -141,8 +141,8 @@ def create(path, specs, **kwargs): This routine iterates through all known package versions, and it creates specs for those versions. If the version satisfies any spec - in the specs list, it is downloaded and added to the mirror.""" - + in the specs list, it is downloaded and added to the mirror. + """ # Make sure nothing is in the way. if os.path.isfile(path): raise MirrorError("%s already exists and is a file." % path) diff --git a/lib/spack/spack/spec.py b/lib/spack/spack/spec.py index 19733c8a41..d8a7cf9d7b 100644 --- a/lib/spack/spack/spec.py +++ b/lib/spack/spack/spec.py @@ -2110,8 +2110,8 @@ class Spec(object): *Example:* ``$_$@$+`` translates to the name, version, and options of the package, but no dependencies, arch, or compiler. - TODO: allow, e.g., $6# to customize short hash length - TODO: allow, e.g., $## for full hash. + TODO: allow, e.g., ``$6#`` to customize short hash length + TODO: allow, e.g., ``$##`` for full hash. """ color = kwargs.get('color', False) length = len(format_string) diff --git a/lib/spack/spack/version.py b/lib/spack/spack/version.py index fb87966d04..bc96dcd716 100644 --- a/lib/spack/spack/version.py +++ b/lib/spack/spack/version.py @@ -158,7 +158,8 @@ class Version(object): """A Version 'satisfies' another if it is at least as specific and has a common prefix. e.g., we want gcc@4.7.3 to satisfy a request for gcc@4.7 so that when a user asks to build with gcc@4.7, we can find - a suitable compiler.""" + a suitable compiler. + """ nself = len(self.version) nother = len(other.version) diff --git a/var/spack/repos/builtin/packages/adios/package.py b/var/spack/repos/builtin/packages/adios/package.py index 96fee2ac28..01834383b8 100644 --- a/var/spack/repos/builtin/packages/adios/package.py +++ b/var/spack/repos/builtin/packages/adios/package.py @@ -30,7 +30,8 @@ class Adios(Package): """The Adaptable IO System (ADIOS) provides a simple, flexible way for scientists to describe the data in their code that may need to be written, - read, or processed outside of the running simulation.""" + read, or processed outside of the running simulation. + """ homepage = "http://www.olcf.ornl.gov/center-projects/adios/" url = "https://github.com/ornladios/ADIOS/archive/v1.10.0.tar.gz" diff --git a/var/spack/repos/builtin/packages/arpack-ng/package.py b/var/spack/repos/builtin/packages/arpack-ng/package.py index 2fa7608098..0e71125d41 100644 --- a/var/spack/repos/builtin/packages/arpack-ng/package.py +++ b/var/spack/repos/builtin/packages/arpack-ng/package.py @@ -50,7 +50,8 @@ class ArpackNg(Package): forked it and implemented their own modifications, arpack-ng aims to tackle this by providing a common repository and maintained versions. - arpack-ng is replacing arpack almost everywhere.""" + arpack-ng is replacing arpack almost everywhere. + """ homepage = 'https://github.com/opencollab/arpack-ng' url = 'https://github.com/opencollab/arpack-ng/archive/3.3.0.tar.gz' diff --git a/var/spack/repos/builtin/packages/astyle/package.py b/var/spack/repos/builtin/packages/astyle/package.py index 7b450352ec..eecdcfdad7 100644 --- a/var/spack/repos/builtin/packages/astyle/package.py +++ b/var/spack/repos/builtin/packages/astyle/package.py @@ -27,7 +27,8 @@ from spack import * class Astyle(Package): """A Free, Fast, and Small Automatic Formatter for C, C++, C++/CLI, - Objective-C, C#, and Java Source Code.""" + Objective-C, C#, and Java Source Code. + """ homepage = "http://astyle.sourceforge.net/" url = "http://downloads.sourceforge.net/project/astyle/astyle/astyle%202.04/astyle_2.04_linux.tar.gz" diff --git a/var/spack/repos/builtin/packages/caliper/package.py b/var/spack/repos/builtin/packages/caliper/package.py index 770037ab49..113bef61b8 100644 --- a/var/spack/repos/builtin/packages/caliper/package.py +++ b/var/spack/repos/builtin/packages/caliper/package.py @@ -28,7 +28,8 @@ from spack import * class Caliper(Package): """Caliper is a generic context annotation system. It gives programmers the ability to provide arbitrary program context information to (performance) - tools at runtime.""" + tools at runtime. + """ homepage = "https://github.com/LLNL/Caliper" url = "" diff --git a/var/spack/repos/builtin/packages/cfitsio/package.py b/var/spack/repos/builtin/packages/cfitsio/package.py index fc5ae0eef5..35d9662f6f 100644 --- a/var/spack/repos/builtin/packages/cfitsio/package.py +++ b/var/spack/repos/builtin/packages/cfitsio/package.py @@ -27,7 +27,8 @@ from spack import * class Cfitsio(Package): """CFITSIO is a library of C and Fortran subroutines for reading and writing - data files in FITS (Flexible Image Transport System) data format.""" + data files in FITS (Flexible Image Transport System) data format. + """ homepage = 'http://heasarc.gsfc.nasa.gov/fitsio/' diff --git a/var/spack/repos/builtin/packages/cube/package.py b/var/spack/repos/builtin/packages/cube/package.py index 55f71ef681..8c835b3886 100644 --- a/var/spack/repos/builtin/packages/cube/package.py +++ b/var/spack/repos/builtin/packages/cube/package.py @@ -30,7 +30,8 @@ class Cube(Package): multi-dimensional performance space consisting of the dimensions: - performance metric - call path - - system resource""" + - system resource + """ homepage = "http://www.scalasca.org/software/cube-4.x/download.html" url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.2/dist/cube-4.2.3.tar.gz" diff --git a/var/spack/repos/builtin/packages/datamash/package.py b/var/spack/repos/builtin/packages/datamash/package.py index 65773d1978..85adeca996 100644 --- a/var/spack/repos/builtin/packages/datamash/package.py +++ b/var/spack/repos/builtin/packages/datamash/package.py @@ -27,7 +27,8 @@ from spack import * class Datamash(Package): """GNU datamash is a command-line program which performs basic numeric, - textual and statistical operations on input textual data files.""" + textual and statistical operations on input textual data files. + """ homepage = "https://www.gnu.org/software/datamash/" url = "http://ftp.gnu.org/gnu/datamash/datamash-1.0.5.tar.gz" diff --git a/var/spack/repos/builtin/packages/eigen/package.py b/var/spack/repos/builtin/packages/eigen/package.py index 2dd43c0113..42dc24e373 100644 --- a/var/spack/repos/builtin/packages/eigen/package.py +++ b/var/spack/repos/builtin/packages/eigen/package.py @@ -27,7 +27,8 @@ from spack import * class Eigen(Package): """Eigen is a C++ template library for linear algebra matrices, - vectors, numerical solvers, and related algorithms.""" + vectors, numerical solvers, and related algorithms. + """ homepage = 'http://eigen.tuxfamily.org/' url = 'http://bitbucket.org/eigen/eigen/get/3.2.7.tar.bz2' diff --git a/var/spack/repos/builtin/packages/espresso/package.py b/var/spack/repos/builtin/packages/espresso/package.py index 1d8c9805b1..3dca1ba187 100644 --- a/var/spack/repos/builtin/packages/espresso/package.py +++ b/var/spack/repos/builtin/packages/espresso/package.py @@ -30,7 +30,8 @@ class Espresso(Package): """QE is an integrated suite of Open-Source computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane - waves, and pseudopotentials.""" + waves, and pseudopotentials. + """ homepage = 'http://quantum-espresso.org' url = 'http://www.qe-forge.org/gf/download/frsrelease/204/912/espresso-5.3.0.tar.gz' diff --git a/var/spack/repos/builtin/packages/gdal/package.py b/var/spack/repos/builtin/packages/gdal/package.py index cf8dce4ef1..4f54b3a841 100644 --- a/var/spack/repos/builtin/packages/gdal/package.py +++ b/var/spack/repos/builtin/packages/gdal/package.py @@ -32,7 +32,8 @@ class Gdal(Package): it presents a single raster abstract data model and vector abstract data model to the calling application for all supported formats. It also comes with a variety of useful command line - utilities for data translation and processing""" + utilities for data translation and processing. + """ homepage = "http://www.gdal.org/" url = "http://download.osgeo.org/gdal/2.0.2/gdal-2.0.2.tar.gz" diff --git a/var/spack/repos/builtin/packages/gdb/package.py b/var/spack/repos/builtin/packages/gdb/package.py index fdde649270..a14e166ed4 100644 --- a/var/spack/repos/builtin/packages/gdb/package.py +++ b/var/spack/repos/builtin/packages/gdb/package.py @@ -28,7 +28,8 @@ from spack import * class Gdb(Package): """GDB, the GNU Project debugger, allows you to see what is going on 'inside' another program while it executes -- or what another - program was doing at the moment it crashed.""" + program was doing at the moment it crashed. + """ homepage = "https://www.gnu.org/software/gdb" url = "http://ftp.gnu.org/gnu/gdb/gdb-7.10.tar.gz" diff --git a/var/spack/repos/builtin/packages/gmsh/package.py b/var/spack/repos/builtin/packages/gmsh/package.py index 77e70d675c..1d375f2186 100644 --- a/var/spack/repos/builtin/packages/gmsh/package.py +++ b/var/spack/repos/builtin/packages/gmsh/package.py @@ -32,7 +32,8 @@ class Gmsh(Package): capabilities. Gmsh is built around four modules: geometry, mesh, solver and post-processing. The specification of any input to these modules is done either interactively using the graphical user interface or in ASCII text - files using Gmsh's own scripting language.""" + files using Gmsh's own scripting language. + """ homepage = 'http://gmsh.info' url = 'http://gmsh.info/src/gmsh-2.11.0-source.tgz' diff --git a/var/spack/repos/builtin/packages/lmod/package.py b/var/spack/repos/builtin/packages/lmod/package.py index 15555e1200..c2daca80a5 100644 --- a/var/spack/repos/builtin/packages/lmod/package.py +++ b/var/spack/repos/builtin/packages/lmod/package.py @@ -32,7 +32,8 @@ class Lmod(Package): dynamically change the users' environment through modulefiles. This includes easily adding or removing directories to the PATH environment variable. Modulefiles for Library packages provide environment variables - that specify where the library and header files can be found.""" + that specify where the library and header files can be found. + """ homepage = 'https://www.tacc.utexas.edu/research-development/tacc-projects/lmod' url = 'https://github.com/TACC/Lmod/archive/6.4.1.tar.gz' diff --git a/var/spack/repos/builtin/packages/lua-luafilesystem/package.py b/var/spack/repos/builtin/packages/lua-luafilesystem/package.py index dca7c247fa..9e0e449813 100644 --- a/var/spack/repos/builtin/packages/lua-luafilesystem/package.py +++ b/var/spack/repos/builtin/packages/lua-luafilesystem/package.py @@ -32,7 +32,8 @@ class LuaLuafilesystem(Package): LuaFileSystem offers a portable way to access the underlying directory structure and file attributes. - LuaFileSystem is free software and uses the same license as Lua 5.1""" + LuaFileSystem is free software and uses the same license as Lua 5.1 + """ homepage = 'http://keplerproject.github.io/luafilesystem' url = 'https://github.com/keplerproject/luafilesystem/archive/v_1_6_3.tar.gz' diff --git a/var/spack/repos/builtin/packages/mxml/package.py b/var/spack/repos/builtin/packages/mxml/package.py index db2e7eb441..29e3b27d6e 100644 --- a/var/spack/repos/builtin/packages/mxml/package.py +++ b/var/spack/repos/builtin/packages/mxml/package.py @@ -28,7 +28,8 @@ from spack import * class Mxml(Package): """Mini-XML is a small XML library that you can use to read and write XML and XML-like data files in your application without requiring large - non-standard libraries.""" + non-standard libraries. + """ homepage = "http://www.msweet.org" url = "http://www.msweet.org/files/project3/mxml-2.9.tar.gz" diff --git a/var/spack/repos/builtin/packages/ncdu/package.py b/var/spack/repos/builtin/packages/ncdu/package.py index a22671250e..0842a592cc 100644 --- a/var/spack/repos/builtin/packages/ncdu/package.py +++ b/var/spack/repos/builtin/packages/ncdu/package.py @@ -30,7 +30,8 @@ class Ncdu(Package): to find space hogs on a remote server where you don't have an entire gaphical setup available, but it is a useful tool even on regular desktop systems. Ncdu aims to be fast, simple and easy to use, and should be able - to run in any minimal POSIX-like environment with ncurses installed.""" + to run in any minimal POSIX-like environment with ncurses installed. + """ homepage = "http://dev.yorhel.nl/ncdu" url = "http://dev.yorhel.nl/download/ncdu-1.11.tar.gz" diff --git a/var/spack/repos/builtin/packages/opari2/package.py b/var/spack/repos/builtin/packages/opari2/package.py index b270931d0d..20c67716a4 100644 --- a/var/spack/repos/builtin/packages/opari2/package.py +++ b/var/spack/repos/builtin/packages/opari2/package.py @@ -33,7 +33,8 @@ class Opari2(Package): as well as the usage of pre-instrumented libraries. Furthermore, an efficient way of tracking parent-child relationships was added. Additionally, we extended OPARI2 to support instrumentation of OpenMP 3.0 - tied tasks.""" + tied tasks. + """ homepage = "http://www.vi-hps.org/projects/score-p" url = "http://www.vi-hps.org/upload/packages/opari2/opari2-1.1.2.tar.gz" diff --git a/var/spack/repos/builtin/packages/openjpeg/package.py b/var/spack/repos/builtin/packages/openjpeg/package.py index 6ba368a0f7..fc505e19a9 100644 --- a/var/spack/repos/builtin/packages/openjpeg/package.py +++ b/var/spack/repos/builtin/packages/openjpeg/package.py @@ -31,7 +31,8 @@ class Openjpeg(Package): still-image compression standard from the Joint Photographic Experts Group (JPEG). Since April 2015, it is officially recognized by ISO/IEC and - ITU-T as a JPEG 2000 Reference Software.""" + ITU-T as a JPEG 2000 Reference Software. + """ homepage = "https://github.com/uclouvain/openjpeg" url = "https://github.com/uclouvain/openjpeg/archive/version.2.1.tar.gz" diff --git a/var/spack/repos/builtin/packages/parallel/package.py b/var/spack/repos/builtin/packages/parallel/package.py index 189a5a6054..81c0195651 100644 --- a/var/spack/repos/builtin/packages/parallel/package.py +++ b/var/spack/repos/builtin/packages/parallel/package.py @@ -28,7 +28,8 @@ from spack import * class Parallel(Package): """GNU parallel is a shell tool for executing jobs in parallel using one or more computers. A job can be a single command or a small - script that has to be run for each of the lines in the input.""" + script that has to be run for each of the lines in the input. + """ homepage = "http://www.gnu.org/software/parallel/" url = "http://ftp.gnu.org/gnu/parallel/parallel-20160422.tar.bz2" diff --git a/var/spack/repos/builtin/packages/petsc/package.py b/var/spack/repos/builtin/packages/petsc/package.py index 794633b929..73091bb182 100644 --- a/var/spack/repos/builtin/packages/petsc/package.py +++ b/var/spack/repos/builtin/packages/petsc/package.py @@ -29,7 +29,8 @@ from spack import * class Petsc(Package): """PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial - differential equations.""" + differential equations. + """ homepage = "http://www.mcs.anl.gov/petsc/index.html" url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz" diff --git a/var/spack/repos/builtin/packages/py-prettytable/package.py b/var/spack/repos/builtin/packages/py-prettytable/package.py index 9d3edd4abb..fa1c17ae8c 100644 --- a/var/spack/repos/builtin/packages/py-prettytable/package.py +++ b/var/spack/repos/builtin/packages/py-prettytable/package.py @@ -28,7 +28,8 @@ from spack import * class PyPrettytable(Package): """PrettyTable is a simple Python library designed to make it quick and easy to represent tabular data in visually - appealing ASCII tables.""" + appealing ASCII tables. + """ homepage = "https://code.google.com/archive/p/prettytable/" url = "https://pypi.python.org/packages/e0/a1/36203205f77ccf98f3c6cf17cf068c972e6458d7e58509ca66da949ca347/prettytable-0.7.2.tar.gz" diff --git a/var/spack/repos/builtin/packages/py-tuiview/package.py b/var/spack/repos/builtin/packages/py-tuiview/package.py index a372ec2b67..5caf3ff143 100644 --- a/var/spack/repos/builtin/packages/py-tuiview/package.py +++ b/var/spack/repos/builtin/packages/py-tuiview/package.py @@ -27,7 +27,8 @@ from spack import * class PyTuiview(Package): """TuiView is a lightweight raster GIS with powerful raster attribute - table manipulation abilities.""" + table manipulation abilities. + """ homepage = "https://bitbucket.org/chchrsc/tuiview" url = "https://bitbucket.org/chchrsc/tuiview/get/tuiview-1.1.7.tar.gz" diff --git a/var/spack/repos/builtin/packages/scorep/package.py b/var/spack/repos/builtin/packages/scorep/package.py index d2efd23c37..e0f7972304 100644 --- a/var/spack/repos/builtin/packages/scorep/package.py +++ b/var/spack/repos/builtin/packages/scorep/package.py @@ -28,7 +28,8 @@ from spack import * class Scorep(Package): """The Score-P measurement infrastructure is a highly scalable and easy-to-use tool suite for profiling, event tracing, and online analysis - of HPC applications.""" + of HPC applications. + """ homepage = "http://www.vi-hps.org/projects/score-p" url = "http://www.vi-hps.org/upload/packages/scorep/scorep-1.2.3.tar.gz" diff --git a/var/spack/repos/builtin/packages/screen/package.py b/var/spack/repos/builtin/packages/screen/package.py index eeaebcbfb7..7edfb44a4d 100644 --- a/var/spack/repos/builtin/packages/screen/package.py +++ b/var/spack/repos/builtin/packages/screen/package.py @@ -27,7 +27,8 @@ from spack import * class Screen(Package): """Screen is a full-screen window manager that multiplexes a physical - terminal between several processes, typically interactive shells.""" + terminal between several processes, typically interactive shells. + """ homepage = "https://www.gnu.org/software/screen/" url = "http://ftp.gnu.org/gnu/screen/screen-4.3.1.tar.gz" diff --git a/var/spack/repos/builtin/packages/swiftsim/package.py b/var/spack/repos/builtin/packages/swiftsim/package.py index ec5e74bd15..c591c48d19 100644 --- a/var/spack/repos/builtin/packages/swiftsim/package.py +++ b/var/spack/repos/builtin/packages/swiftsim/package.py @@ -29,7 +29,8 @@ import llnl.util.tty as tty class Swiftsim(Package): """SPH With Inter-dependent Fine-grained Tasking (SWIFT) provides astrophysicists with a state of the art framework to perform - particle based simulations.""" + particle based simulations. + """ homepage = 'http://icc.dur.ac.uk/swift/' url = 'http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0' diff --git a/var/spack/repos/builtin/packages/tau/package.py b/var/spack/repos/builtin/packages/tau/package.py index c70bf31018..1801b41c37 100644 --- a/var/spack/repos/builtin/packages/tau/package.py +++ b/var/spack/repos/builtin/packages/tau/package.py @@ -31,7 +31,8 @@ from llnl.util.filesystem import join_path class Tau(Package): """A portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, - Java, Python.""" + Java, Python. + """ homepage = "http://www.cs.uoregon.edu/research/tau" url = "https://www.cs.uoregon.edu/research/tau/tau_releases/tau-2.25.tar.gz" diff --git a/var/spack/repos/builtin/packages/xerces-c/package.py b/var/spack/repos/builtin/packages/xerces-c/package.py index 61c7625f25..9f3ad8a4dc 100644 --- a/var/spack/repos/builtin/packages/xerces-c/package.py +++ b/var/spack/repos/builtin/packages/xerces-c/package.py @@ -30,7 +30,8 @@ class XercesC(Package): C++. Xerces-C++ makes it easy to give your application the ability to read and write XML data. A shared library is provided for parsing, generating, manipulating, and validating XML documents using the DOM, SAX, and SAX2 - APIs.""" + APIs. + """ homepage = "https://xerces.apache.org/xerces-c" url = "https://www.apache.org/dist/xerces/c/3/sources/xerces-c-3.1.4.tar.bz2" diff --git a/var/spack/repos/builtin/packages/zsh/package.py b/var/spack/repos/builtin/packages/zsh/package.py index b65866b1fd..a70d307be9 100644 --- a/var/spack/repos/builtin/packages/zsh/package.py +++ b/var/spack/repos/builtin/packages/zsh/package.py @@ -28,7 +28,8 @@ from spack import * class Zsh(Package): """Zsh is a shell designed for interactive use, although it is also a powerful scripting language. Many of the useful features of bash, ksh, and - tcsh were incorporated into zsh; many original features were added.""" + tcsh were incorporated into zsh; many original features were added. + """ homepage = "http://www.zsh.org" url = "http://downloads.sourceforge.net/project/zsh/zsh/5.1.1/zsh-5.1.1.tar.gz" |