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| -rw-r--r-- | var/spack/repos/builtin/packages/r-abadata/package.py | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-abadata/package.py b/var/spack/repos/builtin/packages/r-abadata/package.py new file mode 100644 index 0000000000..87639156a1 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-abadata/package.py @@ -0,0 +1,41 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RAbadata(RPackage): + """Provides the data for the gene expression enrichment analysis + conducted in the package 'ABAEnrichment'. The package includes three + datasets which are derived from the Allen Brain Atlas: (1) Gene + expression data from Human Brain (adults) averaged across donors, + (2) Gene expression data from the Developing Human Brain pooled into + five age categories and averaged across donors and (3) a developmental + effect score based on the Developing Human Brain expression data. + All datasets are restricted to protein coding genes.""" + + homepage = "https://bioconductor.org/packages/ABAData/" + url = "https://bioconductor.org/packages/release/data/experiment/src/contrib/ABAData_1.6.0.tar.gz" + + version('1.6.0', '9adfb9fbb39ad05cf72852a229476fb7') |