diff options
573 files changed, 1623 insertions, 183 deletions
diff --git a/var/spack/repos/builtin/packages/r-acepack/package.py b/var/spack/repos/builtin/packages/r-acepack/package.py index 28353cb981..32eda730e5 100644 --- a/var/spack/repos/builtin/packages/r-acepack/package.py +++ b/var/spack/repos/builtin/packages/r-acepack/package.py @@ -29,4 +29,5 @@ class RAcepack(RPackage): license("MIT") + version("1.4.2", sha256="5bffcd12b783f372bb6c50e35317744ac31597c91b6433442a7b0dce2f66ac91") version("1.4.1", sha256="82750507926f02a696f6cc03693e8d4a5ee7e92500c8c15a16a9c12addcd28b9") diff --git a/var/spack/repos/builtin/packages/r-adabag/package.py b/var/spack/repos/builtin/packages/r-adabag/package.py index 343b8c468d..1f489a0c5b 100644 --- a/var/spack/repos/builtin/packages/r-adabag/package.py +++ b/var/spack/repos/builtin/packages/r-adabag/package.py @@ -34,12 +34,17 @@ class RAdabag(RPackage): license("GPL-2.0-or-later") + version("5.0", sha256="ec58756fda2e64753d21e28d9e27ed34f28020045b199a58dcea06a3e2c3d60e") version("4.2", sha256="47019eb8cefc8372996fbb2642f64d4a91d7cedc192690a8d8be6e7e03cd3c81") version("4.1", sha256="ff938c36122cdf58a71a59a6bf79a3c7816966ee7cc4907c4a0a3c0732e3d028") + depends_on("r@4.0.0:", type=("build", "run"), when="@5.0:") depends_on("r-rpart", type=("build", "run")) depends_on("r-caret", type=("build", "run")) - depends_on("r-foreach", type=("build", "run")) + depends_on("r-consrank@2.1.3:", type=("build", "run"), when="@5.0:") depends_on("r-doparallel", type=("build", "run")) + depends_on("r-dplyr", type=("build", "run"), when="@5.0:") + depends_on("r-foreach", type=("build", "run")) + depends_on("r-tidyr", type=("build", "run"), when="@5.0:") depends_on("r-mlbench", type=("build", "run"), when="@:4.1") diff --git a/var/spack/repos/builtin/packages/r-adegraphics/package.py b/var/spack/repos/builtin/packages/r-adegraphics/package.py index 1048a74d06..a83b2cce4d 100644 --- a/var/spack/repos/builtin/packages/r-adegraphics/package.py +++ b/var/spack/repos/builtin/packages/r-adegraphics/package.py @@ -17,6 +17,7 @@ class RAdegraphics(RPackage): license("GPL-2.0-or-later") + version("1.0-21", sha256="e02a92b3a03220fd1f905f9541f506e43ad75b385a7febf74c80690364faeba8") version("1.0-18", sha256="8fe07fc0f73e9917e098de2ee8e6fdb3e07775446683b6222692a3298e4d563c") version("1.0-16", sha256="7ba59ce9aeefe1c25b4b118d08ef458ffd34115412c147cc428629e72a82ec3a") version("1.0-15", sha256="87bbcd072e9a898955f5ede4315e82365086a50a2887bf5bd2e94bbb4d3f678a") diff --git a/var/spack/repos/builtin/packages/r-adephylo/package.py b/var/spack/repos/builtin/packages/r-adephylo/package.py index 225b8bc1cf..f113150a30 100644 --- a/var/spack/repos/builtin/packages/r-adephylo/package.py +++ b/var/spack/repos/builtin/packages/r-adephylo/package.py @@ -16,6 +16,7 @@ class RAdephylo(RPackage): license("GPL-2.0-or-later") + version("1.1-16", sha256="b5ce5de26bbe6e40ca0650650acac3f613e5170d0b14dc5d6e6bbe83c416ce58") version("1.1-13", sha256="2aa132fee9d0a14ac09b0a96af40ac332cb4e13c892908803c335aa7319ca76d") version("1.1-11", sha256="154bf2645eac4493b85877933b9445442524ca4891aefe4e80c294c398cff61a") diff --git a/var/spack/repos/builtin/packages/r-adespatial/package.py b/var/spack/repos/builtin/packages/r-adespatial/package.py index 7fe07cbf9e..dbd61e3dc8 100644 --- a/var/spack/repos/builtin/packages/r-adespatial/package.py +++ b/var/spack/repos/builtin/packages/r-adespatial/package.py @@ -19,6 +19,7 @@ class RAdespatial(RPackage): license("GPL-2.0-or-later") + version("0.3-23", sha256="70e0878b13212f9c450bf1e2bd1c5be87a1e24fed942941855a8dd2dd0c05f33") version("0.3-21", sha256="4ff65f9bc05892a2d37d34ab2b77dbd24f980adc891f5f94f8e56aec771ea79f") version("0.3-20", sha256="f88e009563087c52af5be490bd111cc38b0b70437bbfa189e846080a069b64eb") version("0.3-19", sha256="db50f1c42961e40bcef6d714a89a09b1345dab2dd013cea8e2122fdf99d5d223") diff --git a/var/spack/repos/builtin/packages/r-aer/package.py b/var/spack/repos/builtin/packages/r-aer/package.py index 8e4e5b5702..013efef3cb 100644 --- a/var/spack/repos/builtin/packages/r-aer/package.py +++ b/var/spack/repos/builtin/packages/r-aer/package.py @@ -15,6 +15,7 @@ class RAer(RPackage): cran = "AER" + version("1.2-12", sha256="55c7b0f17ecd0dc6e1c54ab09b40e89676f44658eaad444c818133fae8d1ea86") version("1.2-10", sha256="650a5fb54a8addf8c86f1e0f88f4fac5349731bc5bf34762a991022140eedbdc") version("1.2-9", sha256="3b79390b14766419fc1e8912689bc462d4beb01aff9dad26d628aed69d04540d") version("1.2-7", sha256="3aee5c606313710c2dca6c1e9b2c20a145aa33f2a3ecc5cfcec66c8e91838a93") diff --git a/var/spack/repos/builtin/packages/r-afex/package.py b/var/spack/repos/builtin/packages/r-afex/package.py index 8d83780470..1cf3e17b72 100644 --- a/var/spack/repos/builtin/packages/r-afex/package.py +++ b/var/spack/repos/builtin/packages/r-afex/package.py @@ -26,6 +26,7 @@ class RAfex(RPackage): license("GPL-2.0-or-later") + version("1.3-1", sha256="4a64fb7e86e3d081e576c0d744d1613f391656082962c5799cf3fc5e2ca631a8") version("1.3-0", sha256="f8e276a1070288c54b83db1d1214fd88fe8d8b8698cf0c2743ef2a45f61e1933") version("1.2-1", sha256="e3a8cecd46db9521039275a5bf27937afb3ec4021644cc4fac94096cc585aacb") version("1.2-0", sha256="8b57ffb8ba2f6354185fc79c8b0cab2703d753b89a100f4325bb2e4c7a3531c2") diff --git a/var/spack/repos/builtin/packages/r-amelia/package.py b/var/spack/repos/builtin/packages/r-amelia/package.py index ac36344365..d2a70da851 100644 --- a/var/spack/repos/builtin/packages/r-amelia/package.py +++ b/var/spack/repos/builtin/packages/r-amelia/package.py @@ -27,6 +27,7 @@ class RAmelia(RPackage): cran = "Amelia" + version("1.8.2", sha256="4fb24a247ca20ba942e854f21e366fbbaf8fbcabc99efbb537511a10a732fc3e") version("1.8.1", sha256="120ce62a2acfc845dbeb155ce3f33b41ebad324bc73693a918a95194a9fc47e4") version("1.8.0", sha256="3ec1d5a68dac601b354227916aa8ec72fa1216b603dd887aae2b24cb69b5995e") version("1.7.6", sha256="63c08d374aaf78af46c34dc78da719b3085e58d9fabdc76c6460d5193a621bea") diff --git a/var/spack/repos/builtin/packages/r-aod/package.py b/var/spack/repos/builtin/packages/r-aod/package.py index bb1c02ed20..230890b99d 100644 --- a/var/spack/repos/builtin/packages/r-aod/package.py +++ b/var/spack/repos/builtin/packages/r-aod/package.py @@ -19,6 +19,7 @@ class RAod(RPackage): license("GPL-2.0-or-later") + version("1.3.3", sha256="b7245e8abf7d78cdfa7f74f6d90f79a418b883058aa3edd5977a60bdbed4087e") version("1.3.2", sha256="9b85be7b12b31ac076f2456853a5b18d8a79ce2b86d00055264529a0cd28515c") version("1.3.1", sha256="052d8802500fcfdb3b37a8e3e6f3fbd5c3a54e48c3f68122402d2ea3a15403bc") diff --git a/var/spack/repos/builtin/packages/r-ape/package.py b/var/spack/repos/builtin/packages/r-ape/package.py index 79c01e29ef..7ab951511f 100644 --- a/var/spack/repos/builtin/packages/r-ape/package.py +++ b/var/spack/repos/builtin/packages/r-ape/package.py @@ -29,6 +29,7 @@ class RApe(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("5.8", sha256="24ce729979e1bcc60317e71e5100ce54156ceb7484917b0d64260f733ae84d24") version("5.7-1", sha256="8b09c71218d8aa629e43bc807b433a4e30a61847d91b2810e31c366f0fe5057a") version("5.6-2", sha256="9b62450a0390a1f07df007d348ad4cedcd814d42cb11c5a300ed33550fd41257") version("5.6-1", sha256="25401e036576eed1200e15bf68879ccd85611303a3508b989e15164cd4c0f7f7") diff --git a/var/spack/repos/builtin/packages/r-aplot/package.py b/var/spack/repos/builtin/packages/r-aplot/package.py index a13354904e..537d9efc75 100644 --- a/var/spack/repos/builtin/packages/r-aplot/package.py +++ b/var/spack/repos/builtin/packages/r-aplot/package.py @@ -20,6 +20,7 @@ class RAplot(RPackage): license("Artistic-2.0") + version("0.2.3", sha256="1fb062050199933f724164118cc3e5d85b60a3a4d4a466016bed2928b0310d6a") version("0.1.10", sha256="d937768241f887628b88bb3b49dd6cbe9b7dae39ae7054e7380a9836721a67d1") version("0.1.8", sha256="d931d7769dc7ce4bc938e8c068973721e89da0aa5f40a04f8a9119621b33459c") version("0.1.7", sha256="f6250f5f6d1addc8d5717be80a92c569bfd83d35bce2e3dbeb251c9ae1be8616") @@ -27,9 +28,11 @@ class RAplot(RPackage): version("0.1.4", sha256="cde9dfc1c6b38e370c1f7338651c37727efa57d52b646fec6b021855809492ac") version("0.1.2", sha256="899c4d101ddcedb1eba9803d78cf02288b63de25e2879add8add1165167509f0") + depends_on("r@4.1.0:", type=("build", "run"), when="@0.2.0:") depends_on("r-ggfun@0.0.4:", type=("build", "run"), when="@0.1.2:") depends_on("r-ggfun@0.0.6:", type=("build", "run"), when="@0.1.4:") depends_on("r-ggfun@0.0.9:", type=("build", "run"), when="@0.1.10:") + depends_on("r-ggfun@0.1.3:", type=("build", "run"), when="@0.2.1:") depends_on("r-ggplot2", type=("build", "run")) depends_on("r-ggplotify", type=("build", "run")) depends_on("r-patchwork", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-argparse/package.py b/var/spack/repos/builtin/packages/r-argparse/package.py index fbacffb183..758c817412 100644 --- a/var/spack/repos/builtin/packages/r-argparse/package.py +++ b/var/spack/repos/builtin/packages/r-argparse/package.py @@ -17,6 +17,7 @@ class RArgparse(RPackage): license("GPL-2.0-or-later") + version("2.2.3", sha256="a50cc4e1221f063e472a8cfe7e881a1d4abed5ef93cf40d5f65a2528cdfd2674") version("2.2.2", sha256="b62c9bf5e6ca35fb7a2e614a916815c04cbf6c6db3f89f99b4df76470a4a856d") version("2.1.6", sha256="2ad7faad795878b88969ac5d91ba38f4e96deb85dfea7148c3510f0eaa3de592") version("2.1.5", sha256="83e112beb47733849980b286d93ac930f0cbe6ac78fcb94fc9f6b0eea882658d") diff --git a/var/spack/repos/builtin/packages/r-arm/package.py b/var/spack/repos/builtin/packages/r-arm/package.py new file mode 100644 index 0000000000..c451ac36e1 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-arm/package.py @@ -0,0 +1,27 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RArm(RPackage): + """Functions to accompany A. Gelman and J. Hill, Data Analysis Using + Regression and Multilevel/Hierarchical Models, Cambridge University + Press, 2007.""" + + homepage = "https://github.com/suyusung/arm" + cran = "arm" + + license("GPL-2.0-or-later", checked_by="wdconinc") + + version("1.14-4", sha256="425bcb0afea2efb668d15ed8daa430bb356c62587eba806fd91e37afac1807bd") + + depends_on("r@3.1.0:", type=("build", "run")) + depends_on("r-mass", type=("build", "run")) + depends_on("r-matrix@1.0:", type=("build", "run")) + depends_on("r-lme4@1.0:", type=("build", "run")) + depends_on("r-abind", type=("build", "run")) + depends_on("r-coda", type=("build", "run")) + depends_on("r-nlme", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-askpass/package.py b/var/spack/repos/builtin/packages/r-askpass/package.py index 8c7d5a5d3e..76563eb0ef 100644 --- a/var/spack/repos/builtin/packages/r-askpass/package.py +++ b/var/spack/repos/builtin/packages/r-askpass/package.py @@ -22,6 +22,7 @@ class RAskpass(RPackage): license("MIT") + version("1.2.0", sha256="b922369781934d0ffc8d0c0177e8ace56796c2e6a726f65e460c16f792592cef") version("1.1", sha256="db40827d1bdbb90c0aa2846a2961d3bf9d76ad1b392302f9dd84cc2fd18c001f") depends_on("r-sys@2.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-assertive-code/package.py b/var/spack/repos/builtin/packages/r-assertive-code/package.py index 81b3036035..cfab4f28a2 100644 --- a/var/spack/repos/builtin/packages/r-assertive-code/package.py +++ b/var/spack/repos/builtin/packages/r-assertive-code/package.py @@ -16,6 +16,7 @@ class RAssertiveCode(RPackage): cran = "assertive.code" + version("0.0-4", sha256="2f820474ed20e06f65b284962c87cd1e85220a11cc7fcde09716f0eee5821387") version("0.0-3", sha256="ef80e8d1d683d776a7618e78ddccffca7f72ab4a0fcead90c670bb8f8cb90be2") depends_on("r@3.0.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-backports/package.py b/var/spack/repos/builtin/packages/r-backports/package.py index 45f7f2edd6..9fa8a9c63d 100644 --- a/var/spack/repos/builtin/packages/r-backports/package.py +++ b/var/spack/repos/builtin/packages/r-backports/package.py @@ -20,6 +20,7 @@ class RBackports(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.5.0", sha256="0d3ed9db8f1505e88967f48d669b2a257e0c6b7e6320ea64b946c1bd40897ca2") version("1.4.1", sha256="845c3c59fbb05e5a892c4231b955a0afdd331d82b7cc815bcff0672023242474") version("1.4.0", sha256="e7611565d24a852ad8b08579a7c67ad9121c1bda148bade98c7bec686e8dabbf") version("1.2.1", sha256="a2834bbd57e305e5d8010322f1906ea1789b3b5ba5eca77c5ff4248aceb7c2d5") diff --git a/var/spack/repos/builtin/packages/r-bayesm/package.py b/var/spack/repos/builtin/packages/r-bayesm/package.py index faebd2b48d..6af5198de1 100644 --- a/var/spack/repos/builtin/packages/r-bayesm/package.py +++ b/var/spack/repos/builtin/packages/r-bayesm/package.py @@ -33,6 +33,7 @@ class RBayesm(RPackage): license("GPL-2.0-or-later") + version("3.1-6", sha256="17d72b9cdc090845f98e7a04640380d0baef8bc23d1487c8f64dc192fdb93cb5") version("3.1-5", sha256="f223074ca41ede293b48350eac77a565e034f0f8cf3dd72d0e1d126cc58047a2") version("3.1-4", sha256="061b216c62bc72eab8d646ad4075f2f78823f9913344a781fa53ea7cf4a48f94") version("3.1-3", sha256="51e4827eca8cd4cf3626f3c2282543df7c392b3ffb843f4bfb386fe104642a10") diff --git a/var/spack/repos/builtin/packages/r-bayesplot/package.py b/var/spack/repos/builtin/packages/r-bayesplot/package.py index adec1f7beb..3910a5bca3 100644 --- a/var/spack/repos/builtin/packages/r-bayesplot/package.py +++ b/var/spack/repos/builtin/packages/r-bayesplot/package.py @@ -22,6 +22,7 @@ class RBayesplot(RPackage): license("GPL-3.0-or-later") + version("1.11.1", sha256="4f71e67391e0135acd3e890989b87025f3f8160242f532a8e1a0ed74ed0f3830") version("1.10.0", sha256="bb4cb92b1ae4cf8ae5f4b5cb092aba34af3d820d137e1f2265cca8f3e85113ff") version("1.9.0", sha256="0a81a4b99cf781334e57cfc3c469fad8b932a68204016a3bbca33cab4e2a1e43") version("1.8.1", sha256="d8d74201ea91fa5438714686ca22a947ec9375b6c12b0cfef010c57104b1aa2a") @@ -30,7 +31,9 @@ class RBayesplot(RPackage): depends_on("r@3.1.0:", type=("build", "run")) depends_on("r-dplyr@0.8.0:", type=("build", "run")) depends_on("r-ggplot2@3.0.0:", type=("build", "run")) + depends_on("r-ggplot2@3.4.0:", type=("build", "run"), when="@1.11.0:") depends_on("r-ggridges", type=("build", "run")) + depends_on("r-ggridges@0.5.5:", type=("build", "run"), when="@1.11.1:") depends_on("r-glue", type=("build", "run")) depends_on("r-posterior", type=("build", "run"), when="@1.9.0:") depends_on("r-reshape2", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-bglr/package.py b/var/spack/repos/builtin/packages/r-bglr/package.py index 98a96e20b9..0a9e961c88 100644 --- a/var/spack/repos/builtin/packages/r-bglr/package.py +++ b/var/spack/repos/builtin/packages/r-bglr/package.py @@ -13,6 +13,7 @@ class RBglr(RPackage): license("GPL-3.0-only") + version("1.1.2", sha256="39476f3739bd86905a379e2d5de86ef1f8b0e10c311e350d95ce7aadb7b28224") version("1.1.0", sha256="97c5bb8a461eb408e907693811b2d917efc993000da06591a83a3f5529451ea7") version("1.0.9", sha256="440a96f9f502e0d6ecc8c00720d1ccdbab5ee8223e1def6c930edaa9a9de9099") version("1.0.8", sha256="5e969590d80b2f272c02a43b487ab1ffa13af386e0342993e6ac484fc82c9b95") diff --git a/var/spack/repos/builtin/packages/r-bh/package.py b/var/spack/repos/builtin/packages/r-bh/package.py index ec028b901d..5745307b54 100644 --- a/var/spack/repos/builtin/packages/r-bh/package.py +++ b/var/spack/repos/builtin/packages/r-bh/package.py @@ -26,6 +26,7 @@ class RBh(RPackage): cran = "BH" + version("1.84.0-0", sha256="6fb660755f572cd975073d7052075654acf8db12d208954ca223b8e4f77ef1ac") version("1.81.0-1", sha256="f51c8badd6f181e06353314e1d15a6ec1495cc498ee74b6fa4ea8aba6e97ff64") version("1.78.0-0", sha256="3b9e9d07682013e0c06a396dda176b405eab99a7273eca6c40d1b4c4110e8cb3") version("1.75.0-0", sha256="ae4c10992607dd697663f60675a46a5770851da159330bb63c4a68890bdd6f5a") diff --git a/var/spack/repos/builtin/packages/r-biasedurn/package.py b/var/spack/repos/builtin/packages/r-biasedurn/package.py index 9b626313ab..4efc158c22 100644 --- a/var/spack/repos/builtin/packages/r-biasedurn/package.py +++ b/var/spack/repos/builtin/packages/r-biasedurn/package.py @@ -18,6 +18,7 @@ class RBiasedurn(RPackage): cran = "BiasedUrn" + version("2.0.12", sha256="29b3b596431c5364e3be9aae2068adb44a205de31c66ec3fa1ef06a4ab8c5792") version("2.0.9", sha256="bac62bbbc3e2417772f8784996a6c2d0857adb42e86e46b1a9703b187a406b09") version("2.0.8", sha256="205e7f8da8fba76fbf4bd9d12a027599b685dedecc818aad39de5c51dc47b856") version("1.07", sha256="2377c2e59d68e758a566452d7e07e88663ae61a182b9ee455d8b4269dda3228e") diff --git a/var/spack/repos/builtin/packages/r-bigalgebra/package.py b/var/spack/repos/builtin/packages/r-bigalgebra/package.py index 741c9a4ca2..229d37cdbb 100644 --- a/var/spack/repos/builtin/packages/r-bigalgebra/package.py +++ b/var/spack/repos/builtin/packages/r-bigalgebra/package.py @@ -22,6 +22,7 @@ class RBigalgebra(RPackage): license("LGPL-3.0-only OR Apache-2.0") + version("1.1.1", sha256="fc6a48b940cca86caf8372648a1b1e4066f2f6d618a77303a1c8766c5b7bbf1f") version("1.1.0", sha256="e51530287a64826a3dfb55f41594bc8123b7b4c9b2074f6c8de218fa8b525734") version("1.0.1", sha256="ff7e261d0aa0e0f498e926d923ac62fc5cb783fa1f74bb2ff76a09167388a9d2") version("1.0.0", sha256="f186b603bd660be0cc5b7a52c943e23e92fef264f0bc96a8858e38df6cfc4085") diff --git a/var/spack/repos/builtin/packages/r-biglm/package.py b/var/spack/repos/builtin/packages/r-biglm/package.py new file mode 100644 index 0000000000..9fd2391596 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-biglm/package.py @@ -0,0 +1,19 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RBiglm(RPackage): + """Regression for data too large to fit in memory.""" + + homepage = "https://cran.r-project.org/web/packages/biglm/index.html" + cran = "biglm" + + license("GPL-2.0-or-later", checked_by="wdconinc") + + version("0.9-3", sha256="805d483dc58c041f1616267abeb39cecaaf7271a34e90668a5439383bf9a0d58") + + depends_on("r-dbi", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-bigmemory-sri/package.py b/var/spack/repos/builtin/packages/r-bigmemory-sri/package.py index 80deb2b010..780050cf95 100644 --- a/var/spack/repos/builtin/packages/r-bigmemory-sri/package.py +++ b/var/spack/repos/builtin/packages/r-bigmemory-sri/package.py @@ -14,5 +14,6 @@ class RBigmemorySri(RPackage): cran = "bigmemory.sri" + version("0.1.8", sha256="029a4ed24aa17636a20b83857d55fe6a9283acb8b647cbc75280dea8ec987771") version("0.1.6", sha256="3bfa6ac966ce0ea93283f5856a853d0ee5ff85aedd7a7d1ca8a93d0aa642860c") version("0.1.3", sha256="55403252d8bae9627476d1f553236ea5dc7aa6e54da6980526a6cdc66924e155") diff --git a/var/spack/repos/builtin/packages/r-bigmemory/package.py b/var/spack/repos/builtin/packages/r-bigmemory/package.py index caeca61193..24f9e0ec3b 100644 --- a/var/spack/repos/builtin/packages/r-bigmemory/package.py +++ b/var/spack/repos/builtin/packages/r-bigmemory/package.py @@ -18,6 +18,7 @@ class RBigmemory(RPackage): license("LGPL-3.0-only OR Apache-2.0") + version("4.6.4", sha256="fe3f576c0d87fd2820c0f436a202261dff353e50e5b86dd9c80fdea7ad60002d") version("4.6.1", sha256="b56e157c87ed6c4fc69d4cb9c697ae9a2001726e776e41aa7c48b35327b65141") version("4.5.36", sha256="18c67fbe6344b2f8223456c4f19ceebcf6c1166255eab81311001fd67a45ef0e") diff --git a/var/spack/repos/builtin/packages/r-bindrcpp/package.py b/var/spack/repos/builtin/packages/r-bindrcpp/package.py index 8bb8749e99..dc804e6f7b 100644 --- a/var/spack/repos/builtin/packages/r-bindrcpp/package.py +++ b/var/spack/repos/builtin/packages/r-bindrcpp/package.py @@ -16,6 +16,7 @@ class RBindrcpp(RPackage): license("MIT") + version("0.2.3", sha256="662dae785aee715855415f4e743281ccbf0832e426084dc2f0ca9c9c908ec9fa") version("0.2.2", sha256="48130709eba9d133679a0e959e49a7b14acbce4f47c1e15c4ab46bd9e48ae467") version("0.2", sha256="d0efa1313cb8148880f7902a4267de1dcedae916f28d9a0ef5911f44bf103450") diff --git a/var/spack/repos/builtin/packages/r-biocmanager/package.py b/var/spack/repos/builtin/packages/r-biocmanager/package.py index 8bf3a70367..40c1b0dc44 100644 --- a/var/spack/repos/builtin/packages/r-biocmanager/package.py +++ b/var/spack/repos/builtin/packages/r-biocmanager/package.py @@ -13,6 +13,7 @@ class RBiocmanager(RPackage): cran = "BiocManager" + version("1.30.24", sha256="645c423bb144dbd476cb308678bd36e06c1a3494115f157166dd3f59955ec7d1") version("1.30.20", sha256="b9e72d7687abbd785a69fecb530ec86ad92257a6be95b8e15953b193a516d5ea") version("1.30.19", sha256="6897ab1c58ab2fa3108e22d70bc4150c683bb4ac29355ba7886b88acc30c18e2") version("1.30.18", sha256="f763126b45614e1b83260da5311923eac50db24002f3c22fa5f667434a5b5c35") diff --git a/var/spack/repos/builtin/packages/r-biomartr/package.py b/var/spack/repos/builtin/packages/r-biomartr/package.py index cef67089bb..cc61ee3ef5 100644 --- a/var/spack/repos/builtin/packages/r-biomartr/package.py +++ b/var/spack/repos/builtin/packages/r-biomartr/package.py @@ -25,6 +25,7 @@ class RBiomartr(RPackage): license("GPL-2.0-only") + version("1.0.7", sha256="9d1d5c51b61ee67ce7ca18afdb0a136ef5709d92d077d80163f9d52ee6c28645") version("1.0.2", sha256="7fd6cccd915aa39e593fb7591107ab9792d98a119dd42f3f666e5184f4e42743") version("0.9.2", sha256="d88085696e9c5614828602254c33f2cdd3bbfeebc2f21a705eee3cb961097c89") diff --git a/var/spack/repos/builtin/packages/r-bitops/package.py b/var/spack/repos/builtin/packages/r-bitops/package.py index 2816e2f800..7cfcdeb49b 100644 --- a/var/spack/repos/builtin/packages/r-bitops/package.py +++ b/var/spack/repos/builtin/packages/r-bitops/package.py @@ -16,6 +16,7 @@ class RBitops(RPackage): license("GPL-2.0-or-later") + version("1.0-8", sha256="78a14b9f69645dc65e1973e1f1a9968c53d5c5edc6aa1ac85661e1112f212738") version("1.0-7", sha256="e9b5fc92c39f94a10cd0e13f3d6e2a9c17b75ea01467077a51d47a5f708517c4") version("1.0-6", sha256="9b731397b7166dd54941fb0d2eac6df60c7a483b2e790f7eb15b4d7b79c9d69c") diff --git a/var/spack/repos/builtin/packages/r-blavaan/package.py b/var/spack/repos/builtin/packages/r-blavaan/package.py index 5858afc324..c6e8ec7059 100644 --- a/var/spack/repos/builtin/packages/r-blavaan/package.py +++ b/var/spack/repos/builtin/packages/r-blavaan/package.py @@ -18,6 +18,7 @@ class RBlavaan(RPackage): license("GPL-3.0-or-later") + version("0.5-5", sha256="a8d3bc5e9d15a2e8496950e87ed3c6bc6d769e761ec068e1f063f2d255330b6d") version("0.4-7", sha256="43577264a1faff3cf98fce2c03b729816b40a82d36846458b8026b62da3008c3") version("0.4-3", sha256="a9f9f7b32aab7e7f179340c9f0f9d154b5fac51352c4fd590d317c201fe81b74") version("0.4-1", sha256="afb077d72f84ef0b6f45ef2ccb8335358042943c32a3472a9ca239ebca1c4aa4") @@ -29,6 +30,7 @@ class RBlavaan(RPackage): depends_on("r-lavaan@0.6-7:", type=("build", "run"), when="@0.3-18:") depends_on("r-lavaan@0.6-10:", type=("build", "run"), when="@0.4-1:") depends_on("r-lavaan@0.6-14:", type=("build", "run"), when="@0.4-7:") + depends_on("r-lavaan@0.6-17:", type=("build", "run"), when="@0.5-3:") depends_on("r-rcpp@0.12.15:", type=("build", "run")) depends_on("r-coda", type=("build", "run")) depends_on("r-mnormt", type=("build", "run")) @@ -36,6 +38,7 @@ class RBlavaan(RPackage): depends_on("r-loo@2.0:", type=("build", "run")) depends_on("r-rstan@2.19.2:", type=("build", "run")) depends_on("r-rstan@2.21.2:", type=("build", "run"), when="@0.3-18:") + depends_on("r-rstan@2.26.0:", type=("build", "run"), when="@0.5-2:") depends_on("r-rstantools@1.5.0:", type=("build", "run")) depends_on("r-rcppparallel@5.0.1:", type=("build", "run")) depends_on("r-bayesplot", type=("build", "run")) @@ -43,6 +46,7 @@ class RBlavaan(RPackage): depends_on("r-future-apply", type=("build", "run")) depends_on("r-tmvnsim", type=("build", "run"), when="@0.3-18:") depends_on("r-stanheaders@2.18.1:", type=("build", "run")) + depends_on("r-stanheaders@2.26.0:", type=("build", "run"), when="@0.5-2:") depends_on("r-bh@1.69.0:", type=("build", "run")) depends_on("r-rcppeigen@0.3.3.4.0:", type=("build", "run")) depends_on("gmake", type="build") diff --git a/var/spack/repos/builtin/packages/r-blockmodeling/package.py b/var/spack/repos/builtin/packages/r-blockmodeling/package.py index bc330e7b02..a8fc9d5846 100644 --- a/var/spack/repos/builtin/packages/r-blockmodeling/package.py +++ b/var/spack/repos/builtin/packages/r-blockmodeling/package.py @@ -16,6 +16,7 @@ class RBlockmodeling(RPackage): license("GPL-2.0-or-later") + version("1.1.5", sha256="3b6f910078c29b801651e3a686112e41e456c517e1b99fcda11bb12681bb1503") version("1.1.4", sha256="69ce17ed96ca754a6308edb62188e0040e357568b975ce8986f68ecb2fead2b8") version("1.1.3", sha256="5f705f92c9b96dcbdd6f109c6a99f88d70c576485369700b82391b6a75afbda6") version("1.0.5", sha256="18c227bb52f28aff4dae8929563474e3e006e238438c823b67dc6baa897f88ed") diff --git a/var/spack/repos/builtin/packages/r-bookdown/package.py b/var/spack/repos/builtin/packages/r-bookdown/package.py index b798a80533..2346bd0d86 100644 --- a/var/spack/repos/builtin/packages/r-bookdown/package.py +++ b/var/spack/repos/builtin/packages/r-bookdown/package.py @@ -16,6 +16,7 @@ class RBookdown(RPackage): license("GPL-3.0-only") + version("0.40", sha256="58df4a044704b6c42a397f4e430a7fc8f6171bad1447872119aceafd158eac39") version("0.33", sha256="2288e1d0c383e6ab49202a18db6cc1a04c3adc1b25da646cc46167bc6c2892c3") version("0.29", sha256="5b4e3dc44a5c6574e3d9e19ebe7897d3ddcf6eaffe8214e1d272b545929ff723") version("0.26", sha256="c6207288cb72ea7c555cbad449c61278e94b742cac1f610879fb3f2d60b2b185") @@ -41,6 +42,7 @@ class RBookdown(RPackage): depends_on("r-xfun@0.13:", type=("build", "run"), when="@0.21:") depends_on("r-xfun@0.22:", type=("build", "run"), when="@0.24:") depends_on("r-xfun@0.29:", type=("build", "run"), when="@0.26:") + depends_on("r-xfun@0.39:", type=("build", "run"), when="@0.34:") depends_on("r-tinytex@0.12:", type=("build", "run"), when="@0.12:") depends_on("r-yaml@2.1.14:", type=("build", "run")) depends_on("r-yaml@2.1.19:", type=("build", "run"), when="@0.21:") diff --git a/var/spack/repos/builtin/packages/r-boot/package.py b/var/spack/repos/builtin/packages/r-boot/package.py index ae81554a16..1d7b2442cb 100644 --- a/var/spack/repos/builtin/packages/r-boot/package.py +++ b/var/spack/repos/builtin/packages/r-boot/package.py @@ -17,6 +17,7 @@ class RBoot(RPackage): license("custom") + version("1.3-30", sha256="5509d62bd6e6c21b6ef352ab7846d89027bddbfb727fd0cf55da59558bd3fe97") version("1.3-28.1", sha256="d4cde76fcc8ccc7ffa329de69147b66a6a93a10188e89342fd18207b1d02ff53") version("1.3-28", sha256="9f7158fd2714659f590c3955651893dc24bd8f39196bc5a4cc35b0b031744a32") version("1.3-25", sha256="464835fcb453072346ce49e4ae318e04c9dba682349be49db616623b6088fbbe") diff --git a/var/spack/repos/builtin/packages/r-brew/package.py b/var/spack/repos/builtin/packages/r-brew/package.py index 1e2398a8ea..df202638bc 100644 --- a/var/spack/repos/builtin/packages/r-brew/package.py +++ b/var/spack/repos/builtin/packages/r-brew/package.py @@ -17,6 +17,7 @@ class RBrew(RPackage): license("GPL-2.0-only") + version("1.0-10", sha256="4181f7334e032ae0775c5dec49d6137eb25d5430ca3792d321793307b3dda38f") version("1.0-8", sha256="11652d5a7042d645cc5be5f9f97ff4d46083cea7d3ad2dd6ad1570b52c097826") version("1.0-7", sha256="38b859c1dca63479f6937c593da8f806f2b3279585bb6e20ecff1b898469e76e") version("1.0-6", sha256="d70d1a9a01cf4a923b4f11e4374ffd887ad3ff964f35c6f9dc0f29c8d657f0ed") diff --git a/var/spack/repos/builtin/packages/r-brio/package.py b/var/spack/repos/builtin/packages/r-brio/package.py index c4feef388b..310d3f655b 100644 --- a/var/spack/repos/builtin/packages/r-brio/package.py +++ b/var/spack/repos/builtin/packages/r-brio/package.py @@ -17,5 +17,8 @@ class RBrio(RPackage): license("MIT") + version("1.1.5", sha256="a9f22335ea39039de25bb27bccd5ff1ffb2b743579b31d150b6b91c9ea81d0b8") version("1.1.3", sha256="eaa89041856189bee545bf1c42c7920a0bb0f1f70bb477487c467ee3e8fedcc6") version("1.1.0", sha256="6bb3a3b47bea13f1a1e3dcdc8b9f688502643e4b40a481a34aa04a261aabea38") + + depends_on("r@3.6:", when="@1.1.4:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-brms/package.py b/var/spack/repos/builtin/packages/r-brms/package.py index e1ce9accb9..45567c81d8 100644 --- a/var/spack/repos/builtin/packages/r-brms/package.py +++ b/var/spack/repos/builtin/packages/r-brms/package.py @@ -29,6 +29,7 @@ class RBrms(RPackage): license("GPL-2.0-only") + version("2.21.0", sha256="7289ff33c2a4b83584b7fece0a6aa53fd14b5881a467d417fbca5dbf62ec5d58") version("2.19.0", sha256="0e146842c7acfcc6b8273df536eabb5279fb3bf2ae27ce1696f7d838d94fe5c1") version("2.18.0", sha256="63914be03cd1c4e6333317d22d7827ba2dc0414cb0dc88337cf74763ba07e111") version("2.17.0", sha256="24e5a3a40b81bea558e8f660d0de7fd1a4c2080c7553baac98f34dd2682ece71") @@ -37,20 +38,22 @@ class RBrms(RPackage): version("2.15.0", sha256="c11701d1d8758590b74bb845b568b736e4455a81b114c7dfde0b27b7bd1bcc2f") depends_on("r@3.5.0:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@2.20.1:") depends_on("r-rcpp@0.12.0:", type=("build", "run")) depends_on("r-rstan@2.19.2:", type=("build", "run")) + depends_on("r-rstan@2.29.0:", type=("build", "run"), when="@2.21.0:") depends_on("r-ggplot2@2.0.0:", type=("build", "run")) depends_on("r-loo@2.3.1:", type=("build", "run")) depends_on("r-posterior@1.0.0:", type=("build", "run"), when="@2.16:") - depends_on("r-matrix@1.1.1:", type=("build", "run")) + depends_on("r-matrix@1.1-1:", type=("build", "run")) depends_on("r-mgcv@1.8-13:", type=("build", "run")) depends_on("r-rstantools@2.1.1:", type=("build", "run")) depends_on("r-bayesplot@1.5.0:", type=("build", "run")) - depends_on("r-shinystan@2.4.0:", type=("build", "run")) depends_on("r-bridgesampling@0.3-0:", type=("build", "run")) depends_on("r-glue@1.3.0:", type=("build", "run")) depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@2.19.0:") depends_on("r-future@1.19.0:", type=("build", "run")) + depends_on("r-future-apply@1.0.0:", type=("build", "run"), when="@2.21.0:") depends_on("r-matrixstats", type=("build", "run")) depends_on("r-nleqslv", type=("build", "run")) depends_on("r-nlme", type=("build", "run")) @@ -58,4 +61,5 @@ class RBrms(RPackage): depends_on("r-abind", type=("build", "run")) depends_on("r-backports", type=("build", "run")) + depends_on("r-shinystan@2.4.0:", type=("build", "run"), when="@:2.20.4") depends_on("r-projpred@2.0.0:", type=("build", "run"), when="@:2.16.1") diff --git a/var/spack/repos/builtin/packages/r-broom-helpers/package.py b/var/spack/repos/builtin/packages/r-broom-helpers/package.py new file mode 100644 index 0000000000..ac7b5314be --- /dev/null +++ b/var/spack/repos/builtin/packages/r-broom-helpers/package.py @@ -0,0 +1,32 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RBroomHelpers(RPackage): + """Provides suite of functions to work with regression model 'broom::tidy()' + tibbles. The suite includes functions to group regression model terms by + variable, insert reference and header rows for categorical variables, add + variable labels, and more.""" + + homepage = "https://larmarange.github.io/broom.helpers/" + cran = "broom.helpers" + + license("GPL-3.0-or-later", checked_by="wdconinc") + + version("1.16.0", sha256="9a7bac8678cdcc9a7e0f3b6d287d375fd5f1e880c916ac4d661f02c2c84e2715") + + depends_on("r@4.2:", type=("build", "run"), when="@1.16.0:") + depends_on("r-broom@0.8:", type=("build", "run")) + depends_on("r-cli", type=("build", "run")) + depends_on("r-dplyr", type=("build", "run")) + depends_on("r-labelled", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run")) + depends_on("r-purrr", type=("build", "run")) + depends_on("r-rlang@1.0.1:", type=("build", "run")) + depends_on("r-stringr", type=("build", "run")) + depends_on("r-tibble", type=("build", "run")) + depends_on("r-tidyr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-broom/package.py b/var/spack/repos/builtin/packages/r-broom/package.py index 0f48847a4c..f755b886c9 100644 --- a/var/spack/repos/builtin/packages/r-broom/package.py +++ b/var/spack/repos/builtin/packages/r-broom/package.py @@ -22,6 +22,7 @@ class RBroom(RPackage): license("MIT") + version("1.0.6", sha256="24cf36248dffbde38d3d81befa679e362bfd0526b9843bc536a85452a19fbccf") version("1.0.4", sha256="1d5f11b509786a8a45ffdd137243e24d6445f2944947cbd62a0734a06add0ad6") version("1.0.1", sha256="4b5e5aa485f0e23ed993088fc84159e31a00087e3a12327071dda25193382892") version("0.8.0", sha256="66a1095d4430450dc810a5cea61cd7e7bee0e23739dcf5ddc5b57c9894fcf999") @@ -39,7 +40,6 @@ class RBroom(RPackage): depends_on("r-backports", type=("build", "run"), when="@0.5.0:") depends_on("r-dplyr", type=("build", "run")) depends_on("r-dplyr@1.0.0:", type=("build", "run"), when="@0.7.3:") - depends_on("r-ellipsis", type=("build", "run"), when="@0.7.3:") depends_on("r-generics@0.0.2:", type=("build", "run"), when="@0.5.1:") depends_on("r-glue", type=("build", "run"), when="@0.7.3:") depends_on("r-lifecycle", type=("build", "run"), when="@1.0.4:") @@ -51,6 +51,7 @@ class RBroom(RPackage): depends_on("r-tidyr", type=("build", "run")) depends_on("r-tidyr@1.0.0:", type=("build", "run"), when="@0.7.3:") + depends_on("r-ellipsis", type=("build", "run"), when="@0.7.3:1.0.5") depends_on("r-plyr", type=("build", "run"), when="@:0.4.2") depends_on("r-psych", type=("build", "run"), when="@:0.4.2") depends_on("r-reshape2", type=("build", "run"), when="@:0.5.2") diff --git a/var/spack/repos/builtin/packages/r-bslib/package.py b/var/spack/repos/builtin/packages/r-bslib/package.py index f664c30959..d277073d6a 100644 --- a/var/spack/repos/builtin/packages/r-bslib/package.py +++ b/var/spack/repos/builtin/packages/r-bslib/package.py @@ -18,20 +18,27 @@ class RBslib(RPackage): license("MIT") + version("0.8.0", sha256="fd182ddb1b128691d2b0c12882361732a23d451dbf4052ba70b11257e8d44b03") version("0.4.2", sha256="9a40b7a1bbe409af273e1e940d921ab198ea576548f06f055f552f70ff822f19") version("0.4.1", sha256="4ebd1fc84cd19b414e8f8c13fb95270fc28ede125b6e58b08c574ca8c9e0e62f") version("0.4.0", sha256="fbea4ecec726f23618e825624f1d9c03939f765ca5a490b171ebf95b815475c2") version("0.3.1", sha256="5f5cb56e5cab9039a24cd9d70d73b69c2cab5b2f5f37afc15f71dae0339d9849") depends_on("r@2.10:", type=("build", "run")) + depends_on("r-fastmap@1.1.1:", type=("build", "run"), when="@0.7.0:") depends_on("r-htmltools@0.5.2:", type=("build", "run")) depends_on("r-htmltools@0.5.4:", type=("build", "run"), when="@0.4.2:") + depends_on("r-htmltools@0.5.7:", type=("build", "run"), when="@0.6.0:") + depends_on("r-htmltools@0.5.8:", type=("build", "run"), when="@0.7.0:") depends_on("r-jsonlite", type=("build", "run")) depends_on("r-sass@0.4.0:", type=("build", "run")) depends_on("r-jquerylib@0.1.3:", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@0.6.0:") depends_on("r-rlang", type=("build", "run")) depends_on("r-memoise", type=("build", "run"), when="@0.4.0:") depends_on("r-memoise@2.0.1:", type=("build", "run"), when="@0.4.1:") depends_on("r-mime", type=("build", "run"), when="@0.4.2:") + depends_on("r-sass@0.4.0:", type=("build", "run"), when="@0.5.0:") + depends_on("r-sass@0.4.9:", type=("build", "run"), when="@0.6.2:") depends_on("r-base64enc", type=("build", "run"), when="@0.4.2:") depends_on("r-cachem", type=("build", "run"), when="@0.4.0:") diff --git a/var/spack/repos/builtin/packages/r-bwstest/package.py b/var/spack/repos/builtin/packages/r-bwstest/package.py index 85a8808096..159401ee9c 100644 --- a/var/spack/repos/builtin/packages/r-bwstest/package.py +++ b/var/spack/repos/builtin/packages/r-bwstest/package.py @@ -17,6 +17,7 @@ class RBwstest(RPackage): cran = "BWStest" + version("0.2.3", sha256="4bc4cc27fcf0aa60c6497048b74528923aae852c98480900204835a8ebd714b2") version("0.2.2", sha256="faff1dd698f1673a6befacb94d14281077d4c19be035a0a3bf85d77c1dfd5509") depends_on("r-memoise", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-cachem/package.py b/var/spack/repos/builtin/packages/r-cachem/package.py index b12ed8ef58..7e5d9cc36e 100644 --- a/var/spack/repos/builtin/packages/r-cachem/package.py +++ b/var/spack/repos/builtin/packages/r-cachem/package.py @@ -17,8 +17,10 @@ class RCachem(RPackage): license("MIT") + version("1.1.0", sha256="550839fc2ae5d865db475ba2c1714144f07fa0c052c72135b0e4a70287492e21") version("1.0.7", sha256="234fad2a947d1e1fb87d3fa92abf9197877772e31bc81ae5991ae69689b6320a") version("1.0.6", sha256="9a9452f7bcf3f79436c418b3c3290449fb8fd338714d9b992153754d112f1864") depends_on("r-rlang", type=("build", "run")) depends_on("r-fastmap", type=("build", "run")) + depends_on("r-fastmap@1.2.0:", when="@1.1.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-cairo/package.py b/var/spack/repos/builtin/packages/r-cairo/package.py index 8f025f2571..f852fcb5fb 100644 --- a/var/spack/repos/builtin/packages/r-cairo/package.py +++ b/var/spack/repos/builtin/packages/r-cairo/package.py @@ -25,6 +25,7 @@ class RCairo(RPackage): cran = "Cairo" + version("1.6-2", sha256="6b6f4c6f93178a1295860a9dc6dc45e60fec70f684d5c8d0b59baf5b8dd44d62") version("1.6-0", sha256="c762ac1d8daa4af527342360c256ed742de4e3031d997e9e59c9a369fcafb7d3") version("1.5-15", sha256="bb3ab1ff6431c15eb01a66ddf90695cd9a2af3d5a384753f5180cd0401d2e89d") version("1.5-14", sha256="067751face3b5771e72f9fb49bfeefb3a7bbecc060b672ab4393cb5935204c7b") @@ -34,5 +35,14 @@ class RCairo(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r@2.4.0:", type=("build", "run")) - depends_on("cairo@1.2:") + # "The Cairo package requires cairo library 1.2.0 or higher with PNG support enabled" + # See https://www.rforge.net/Cairo/ + depends_on("cairo@1.2: +png") + # Disabled PDF support results in compilation failures in 1.6-1:1.6-2 + # See https://github.com/s-u/Cairo/pull/48 + depends_on("cairo +pdf", type=("build", "run"), when="@1.6-1:1.6-2") + # When cairo +ft, must also have +fc, for cairo_ft_font_face_create_for_pattern test + conflicts( + "^cairo ~fc", when="^cairo +ft", msg="For cairo freetype support, also need fontconfig." + ) depends_on("libxt") diff --git a/var/spack/repos/builtin/packages/r-callr/package.py b/var/spack/repos/builtin/packages/r-callr/package.py index 33abeee94d..6e0b3731df 100644 --- a/var/spack/repos/builtin/packages/r-callr/package.py +++ b/var/spack/repos/builtin/packages/r-callr/package.py @@ -17,6 +17,7 @@ class RCallr(RPackage): license("MIT") + version("3.7.6", sha256="e4bce367e869e42eaeea05566d2033d8cee2103179b11cd9a401440b58a351f8") version("3.7.3", sha256="567bfedf073a1d4c5785f0553341608a214938110567b9a6495ff20ebb2fd04e") version("3.7.2", sha256="12da8a212679e450d8d43c3c6e61ed09b82047f376f316f6f6392f1638580307") version("3.7.0", sha256="d67255148595c6d0ba4c4d241bc9f6b5e00cafe25fdc13e38c10acc38653360a") diff --git a/var/spack/repos/builtin/packages/r-caracas/package.py b/var/spack/repos/builtin/packages/r-caracas/package.py index fea4048e4e..ab1edfe599 100644 --- a/var/spack/repos/builtin/packages/r-caracas/package.py +++ b/var/spack/repos/builtin/packages/r-caracas/package.py @@ -17,6 +17,7 @@ class RCaracas(RPackage): license("GPL-2.0-or-later") + version("2.1.1", sha256="3b31b5b1c2fa038e5a6df12cfe62390f9af0461873a38921d6c26468363c2661") version("2.0.0", sha256="9271239bf7457787371cbd44be74cb9909d67ab7c975b1744d8cf60d8b044b95") version("1.1.2", sha256="9c726c77508617e74d1a11ac6e276973df42e1ad81145db455cc6e420526c757") version("1.1.1", sha256="e14487c9492417cf5c7d7373c37dbb4fea4d91180a1a03154e51eaa7878b2769") diff --git a/var/spack/repos/builtin/packages/r-cardata/package.py b/var/spack/repos/builtin/packages/r-cardata/package.py index 400ff9f35c..6966be3fb0 100644 --- a/var/spack/repos/builtin/packages/r-cardata/package.py +++ b/var/spack/repos/builtin/packages/r-cardata/package.py @@ -19,4 +19,4 @@ class RCardata(RPackage): version("3.0-2", sha256="3b5c4eff1cc1e456a5331084774503eaa06cf61fb7acf6b9e8a6bfabd5735494") depends_on("r@3.0:", type=("build", "run")) - depends_on("r@3.5:", type=("build", "run"), when="@3.0-4:") + depends_on("r@3.5.0:", type=("build", "run"), when="@3.0-4:") diff --git a/var/spack/repos/builtin/packages/r-caretensemble/package.py b/var/spack/repos/builtin/packages/r-caretensemble/package.py index a3114fbd68..8423e8ff99 100644 --- a/var/spack/repos/builtin/packages/r-caretensemble/package.py +++ b/var/spack/repos/builtin/packages/r-caretensemble/package.py @@ -20,15 +20,20 @@ class RCaretensemble(RPackage): license("MIT") + version("4.0.0", sha256="9177ad477fd2872e944231764227bcf5e2eabc9916dabce91f1a2a2decc98f43") version("2.0.2", sha256="d8fcf3742beddc723b68677682708408cc11dcb8b36a0f70f03e7c4763e04f4d") version("2.0.1", sha256="7e595e604ce2d9d32afbc5404e6fcbcd7f80e687316e9ca3303aca3e44c3ef88") depends_on("r@3.2.0:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@4.0.0:") depends_on("r-pbapply", type=("build", "run")) depends_on("r-ggplot2", type=("build", "run")) - depends_on("r-digest", type=("build", "run")) - depends_on("r-plyr", type=("build", "run")) + depends_on("r-patchwork", type=("build", "run"), when="@4.0.0:") + depends_on("r-rlang", type=("build", "run"), when="@4.0.0:") depends_on("r-lattice", type=("build", "run")) - depends_on("r-gridextra", type=("build", "run")) depends_on("r-data-table", type=("build", "run")) depends_on("r-caret", type=("build", "run")) + + depends_on("r-digest", type=("build", "run"), when="@:2.0.3") + depends_on("r-gridextra", type=("build", "run"), when="@:2.0.3") + depends_on("r-plyr", type=("build", "run"), when="@:2.0.3") diff --git a/var/spack/repos/builtin/packages/r-caroline/package.py b/var/spack/repos/builtin/packages/r-caroline/package.py index a4db03a360..ec7b9872f2 100644 --- a/var/spack/repos/builtin/packages/r-caroline/package.py +++ b/var/spack/repos/builtin/packages/r-caroline/package.py @@ -24,6 +24,7 @@ class RCaroline(RPackage): license("Artistic-2.0") + version("0.9.2", sha256="04dfc574b5f763b8c09e57b68657b8ae7e6aae36083dd71819c96f971d660297") version("0.9.0", sha256="7231daacf2f0e89d9363ea919071f8352ae487011f56e84a4054de11a9243ac8") version("0.8.0", sha256="58f464711f7279ca2aa173e6ce29d3308e01db37dccefbbf14cd7720c0231976") version("0.7.6", sha256="e7ba948f7d87f091b498dd0eec2ca4fdad7af4e2bbb67e0945c2f0d3f2eadda9") diff --git a/var/spack/repos/builtin/packages/r-cca/package.py b/var/spack/repos/builtin/packages/r-cca/package.py index c33b4e205c..d692912783 100644 --- a/var/spack/repos/builtin/packages/r-cca/package.py +++ b/var/spack/repos/builtin/packages/r-cca/package.py @@ -17,6 +17,7 @@ class RCca(RPackage): cran = "CCA" + version("1.2.2", sha256="f3b347f15dadd887f31206906e845c4893ec0cd7dc0c7e97c11001434c3d2e64") version("1.2.1", sha256="28febfce7c46039240346410e70f9d8795b536fc4e7e0d48d5370bd23cba9bd0") depends_on("r@2.10:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-checkmate/package.py b/var/spack/repos/builtin/packages/r-checkmate/package.py index ac294085f0..92cbecec4f 100644 --- a/var/spack/repos/builtin/packages/r-checkmate/package.py +++ b/var/spack/repos/builtin/packages/r-checkmate/package.py @@ -17,6 +17,7 @@ class RCheckmate(RPackage): license("BSD-3-Clause") + version("2.3.2", sha256="7255732d6c2da51204128a910e8c0d05246324a0402fca4d0d99433af40a88e3") version("2.1.0", sha256="b784dd5163a0350d084ef34882d9781373839dedeaa9a8b8e6187d773d0d21c6") version("2.0.0", sha256="0dc25b0e20c04836359df1885d099c6e4ad8ae0e585a9e4107f7ea945d9c6fa4") version("1.9.4", sha256="faa25754b757fe483b876f5d07b73f76f69a1baa971420892fadec4af4bbad21") diff --git a/var/spack/repos/builtin/packages/r-chemometrics/package.py b/var/spack/repos/builtin/packages/r-chemometrics/package.py index fac0b96c3e..be933d41df 100644 --- a/var/spack/repos/builtin/packages/r-chemometrics/package.py +++ b/var/spack/repos/builtin/packages/r-chemometrics/package.py @@ -16,6 +16,7 @@ class RChemometrics(RPackage): license("GPL-3.0-or-later") + version("1.4.4", sha256="fd0edb1ebe321ff7677d0a668d7dfc79a7cd55f408a53d1f13db4cf6347aa881") version("1.4.2", sha256="b705832fa167dc24b52b642f571ed1efd24c5f53ba60d02c7797986481b6186a") version("1.4.1", sha256="7646da0077657d672356204aa2094be68e10ec13617f92ae97ff53a389053905") version("1.3.9", sha256="553eda53789b6a4d0f77842c175f98be5b9a04bccc9d2ba0ecde1bb5c8a53f21") diff --git a/var/spack/repos/builtin/packages/r-chron/package.py b/var/spack/repos/builtin/packages/r-chron/package.py index fbce82e224..eb9105173b 100644 --- a/var/spack/repos/builtin/packages/r-chron/package.py +++ b/var/spack/repos/builtin/packages/r-chron/package.py @@ -15,6 +15,7 @@ class RChron(RPackage): license("GPL-2.0-only") + version("2.3-61", sha256="a096957625a0438075b3486322ee07c753c7c4ba3efcd04a3ac92476d6c43b9b") version("2.3-60", sha256="0e0675cec55b6cea87fc5776846215e0445442554684120079e66013067491ee") version("2.3-58", sha256="057fc628cde330c22b9d20365316d3632c2d217f4f2f97d39b1d1a2c93f766d0") version("2.3-57", sha256="9645d86a84d1afc12a0accf4f826fdd40e6d050a313424ad70f8085e8f19c232") diff --git a/var/spack/repos/builtin/packages/r-circlize/package.py b/var/spack/repos/builtin/packages/r-circlize/package.py index 2409a909fa..e480f4d031 100644 --- a/var/spack/repos/builtin/packages/r-circlize/package.py +++ b/var/spack/repos/builtin/packages/r-circlize/package.py @@ -25,6 +25,7 @@ class RCirclize(RPackage): license("MIT") + version("0.4.16", sha256="16dc32c7704906d13a9e5281bb396e92fb89a6b17fa5e201953240726b650b67") version("0.4.15", sha256="d602d55313fe7c675109153d6ed3b99bdba5292e1deefed71d5a21e0db595cc7") version("0.4.13", sha256="6cbadbf8e8b1abbd71a79080677d2b95f2bdd18f2e4d707c32d5c2ff26c5369b") version("0.4.12", sha256="b3b60caa5292cf980cf474c85f59582f6862925631a4da86a78eac05903252f4") @@ -33,6 +34,7 @@ class RCirclize(RPackage): version("0.4.0", sha256="abdc1bbe264be42c1d7b65869979da7cd131032fd6fd3f11f9744dae54e83f5c") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@0.4.16:") depends_on("r-globaloptions@0.1.0:", type=("build", "run")) depends_on("r-globaloptions@0.1.2:", type=("build", "run"), when="@0.4.12:") depends_on("r-shape", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-clarabel/package.py b/var/spack/repos/builtin/packages/r-clarabel/package.py new file mode 100644 index 0000000000..8c78cdb0e8 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-clarabel/package.py @@ -0,0 +1,28 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RClarabel(RPackage): + """A versatile interior point solver that solves linear programs (LPs), + quadratic programs (QPs), second-order cone programs (SOCPs), semidefinite + programs (SDPs), and problems with exponential and power cone constraints + (<https://clarabel.org/stable/>). For quadratic objectives, unlike interior + point solvers based on the standard homogeneous self-dual embedding (HSDE) + model, 'Clarabel' handles quadratic objective without requiring any + epigraphical reformulation of its objective function. It can therefore + be significantly faster than other HSDE-based solvers for problems with + quadratic objective functions. Infeasible problems are detected using using + a homogeneous embedding technique.""" + + homepage = "https://oxfordcontrol.github.io/clarabel-r/" + cran = "clarabel" + + license("Apache-2.0", checked_by="wdconinc") + + version("0.9.0", sha256="50963022f8e5dc9d956193acf7b87194548dc4b3555bd844aa1f9f4d34f2c6bc") + + depends_on("rust", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-class/package.py b/var/spack/repos/builtin/packages/r-class/package.py index 8516aabd74..a55127d71d 100644 --- a/var/spack/repos/builtin/packages/r-class/package.py +++ b/var/spack/repos/builtin/packages/r-class/package.py @@ -16,6 +16,7 @@ class RClass(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("7.3-22", sha256="b6994164e93843fcc7e08dfdc8c8b4af6a5a10ef7153d2e72a6855342508d15c") version("7.3-21", sha256="0c19404aa4d2da61a62495e788b07c8e429c4c5ee64486ea5e6dd347bcaecddf") version("7.3-20", sha256="e65b046bc72b312ff0c5dc7feba4fa3e9bc63387274d44911493782b85f65483") version("7.3-19", sha256="7820ae94b22009561a69ed1f8b2ca2a3814be6a656e9884738206997caecbe37") diff --git a/var/spack/repos/builtin/packages/r-classint/package.py b/var/spack/repos/builtin/packages/r-classint/package.py index 5eec1170fb..ebc37fb90d 100644 --- a/var/spack/repos/builtin/packages/r-classint/package.py +++ b/var/spack/repos/builtin/packages/r-classint/package.py @@ -14,6 +14,7 @@ class RClassint(RPackage): cran = "classInt" + version("0.4-10", sha256="c3561eafbc493ac02840191d4f1e4d2ef437ca8eb20f41fc5eca28f00ee42b8b") version("0.4-9", sha256="5b11af7d08f8793c7b47ee7c68b8e371cb23027165d30abddbd8b2abcc20e1c3") version("0.4-8", sha256="6ae9617f5b71bbecfa204a4f36b5972808bafd060d87a4a5bac17f3ad2ca59b3") version("0.4-3", sha256="9ede7a2a7a6b6c114919a3315a884fb592e33b037a50a4fe45cbd4fe2fc434ac") diff --git a/var/spack/repos/builtin/packages/r-cli/package.py b/var/spack/repos/builtin/packages/r-cli/package.py index ff45407465..95dd64f635 100644 --- a/var/spack/repos/builtin/packages/r-cli/package.py +++ b/var/spack/repos/builtin/packages/r-cli/package.py @@ -20,6 +20,7 @@ class RCli(RPackage): license("MIT") + version("3.6.3", sha256="4295085f11221c54b1dd2b1d39a675a85dfd9f900294297567e1d36f65ac4841") version("3.6.1", sha256="be3006cec7e67f9ae25e21b4658c4bec680038c2ef7467df5f14da3311a05e36") version("3.4.1", sha256="1c585efbfd8b8685c66fac34bcb60f28c351691bb4b9931df214e6e47fd9744e") version("3.3.0", sha256="c3a9ebbcb9017fb9aeda4f7df5ca981e42b169cbd7ce13e592cda2cd74250d63") @@ -34,7 +35,7 @@ class RCli(RPackage): version("1.0.0", sha256="8fa3dbfc954ca61b8510f767ede9e8a365dac2ef95fe87c715a0f37d721b5a1d") depends_on("r@2.10:", type=("build", "run")) - depends_on("r@3,4:", type=("build", "run"), when="@3.3.0:") + depends_on("r@3.4:", type=("build", "run"), when="@3.3.0:") depends_on("r-assertthat", type=("build", "run"), when="@:2.3") depends_on("r-crayon@1.3.4:", type=("build", "run"), when="@:2.2") diff --git a/var/spack/repos/builtin/packages/r-clock/package.py b/var/spack/repos/builtin/packages/r-clock/package.py index 89ddd6dd78..628d6fd076 100644 --- a/var/spack/repos/builtin/packages/r-clock/package.py +++ b/var/spack/repos/builtin/packages/r-clock/package.py @@ -20,10 +20,18 @@ class RClock(RPackage): license("MIT") + version("0.7.1", sha256="432d2fc39d3f20e348f09a9b6136a02a588db585bab428d184da71bf6aa1f0d8") version("0.6.1", sha256="f80c385fd8229538968ffb71d7de53ddc82bfcec6641f8e76f299546c43c1702") depends_on("r@3.4:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@0.7.1:") + depends_on("r-cli@3.6.1:", type=("build", "run"), when="@0.7.0:") + depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@0.7.0:") depends_on("r-rlang@1.0.4:", type=("build", "run")) + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@0.7.0:") depends_on("r-tzdb@0.3.0:", type=("build", "run")) + depends_on("r-tzdb@0.4.0:", type=("build", "run"), when="@0.7.0:") depends_on("r-vctrs@0.4.1:", type=("build", "run")) + depends_on("r-vctrs@0.6.1:", type=("build", "run"), when="@0.7.0:") depends_on("r-cpp11@0.4.2:", type=("build", "run")) + depends_on("r-cpp11@0.4.3:", type=("build", "run"), when="@0.7.0:") diff --git a/var/spack/repos/builtin/packages/r-clue/package.py b/var/spack/repos/builtin/packages/r-clue/package.py index ded46e1b06..a7dd171c09 100644 --- a/var/spack/repos/builtin/packages/r-clue/package.py +++ b/var/spack/repos/builtin/packages/r-clue/package.py @@ -13,6 +13,7 @@ class RClue(RPackage): license("GPL-2.0-only") + version("0.3-65", sha256="bdf8fdd35fb2b1c65d09766da79d930fa664a00aa497f03b636400eecb623ef8") version("0.3-64", sha256="f45cb7a84c87ddca2b9f7c2ea9505016d002e6fda23322e6d57466c7a4de28af") version("0.3-62", sha256="575a3fa2c4aa1ae5c7e35f4462f2f331d291d87916aa12f0d11f61988d5e1ed2") version("0.3-61", sha256="71311b16ce380fd9a8834be95b55b3d1b47e4ee2b8acb35b8d481138c314dc31") diff --git a/var/spack/repos/builtin/packages/r-cluster/package.py b/var/spack/repos/builtin/packages/r-cluster/package.py index 096fb45278..f1e39c92bf 100644 --- a/var/spack/repos/builtin/packages/r-cluster/package.py +++ b/var/spack/repos/builtin/packages/r-cluster/package.py @@ -17,6 +17,7 @@ class RCluster(RPackage): license("GPL-2.0-or-later") + version("2.1.6", sha256="d1c50efafd35a55387cc5b36086b97d5591e0b33c48dc718005d2f5907113164") version("2.1.4", sha256="c6f10ceca29a176ba833f24ebf71fd451629052c2338398ba286df5689d6f5b6") version("2.1.3", sha256="a3ad7a9455d634c4e0c6ccf8ea7a3a392a0ecf9c2bdb368d127ffa68a93164a9") version("2.1.2", sha256="5c8aa760fb6dda4fcfe6196e561ffcd2dc12b1a6c7659cb90be2cde747311499") diff --git a/var/spack/repos/builtin/packages/r-clustergeneration/package.py b/var/spack/repos/builtin/packages/r-clustergeneration/package.py index 603effe459..7a15cdce70 100644 --- a/var/spack/repos/builtin/packages/r-clustergeneration/package.py +++ b/var/spack/repos/builtin/packages/r-clustergeneration/package.py @@ -20,6 +20,7 @@ class RClustergeneration(RPackage): cran = "clusterGeneration" + version("1.3.8", sha256="0f842256582ab41bcd00ee08ea6d7e231ff362fe0156a53347873e9636f73a70") version("1.3.7", sha256="534f29d8f7ed11e6e9a496f15845b588ec7133f3da5e6def8140b88500e52d5c") version("1.3.4", sha256="7c591ad95a8a9d7fb0e4d5d80dfd78f7d6a63cf7d11eb53dd3c98fdfb5b868aa") diff --git a/var/spack/repos/builtin/packages/r-coda/package.py b/var/spack/repos/builtin/packages/r-coda/package.py index 4824988bbb..28d673c5b7 100644 --- a/var/spack/repos/builtin/packages/r-coda/package.py +++ b/var/spack/repos/builtin/packages/r-coda/package.py @@ -17,10 +17,11 @@ class RCoda(RPackage): license("GPL-2.0-or-later") + version("0.19-4.1", sha256="f4b451d86fbb56ff9ade043ddd6b0944368c37d0dad12d02837750ecdc708ad6") version("0.19-4", sha256="422d3cfd34797a3631e9c4812431940599c0ca4bb9937797bed07b7b1d6fe58f") version("0.19-3", sha256="d3df1fc848bcf1af8fae13d61eeab60e99a3d4b4db384bec4326f909f502c5d6") version("0.19-2", sha256="678a7e6a87a2723089daeb780ea37ac3d4319b37eabe26928ea3fa9c9b1eda0d") version("0.19-1", sha256="d41ff5731da6805170769dba75dd011ab33f916d15b2336001f279e21a524491") - depends_on("r@2.14:", type=("build", "run")) + depends_on("r@2.14.0:", type=("build", "run")) depends_on("r-lattice", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-codetools/package.py b/var/spack/repos/builtin/packages/r-codetools/package.py index a4c6005388..03c20803e6 100644 --- a/var/spack/repos/builtin/packages/r-codetools/package.py +++ b/var/spack/repos/builtin/packages/r-codetools/package.py @@ -13,6 +13,7 @@ class RCodetools(RPackage): license("GPL-2.0-or-later") + version("0.2-20", sha256="3be6f375ec178723ddfd559d1e8e85bfeee04a5fbaf9f53f2f844e1669fea863") version("0.2-19", sha256="c4b7e567c87f33dad85de92f79641e5e5b5deede6d19a9dfa47133d191782dab") version("0.2-18", sha256="1a9ea6b9792dbd1688078455929385acc3a5e4bef945c77bec1261fa4a084c28") version("0.2-16", sha256="c276757c3adabaf700f2ea25835892b09bc1bd438ebd17c805ea9073ed8a74b6") diff --git a/var/spack/repos/builtin/packages/r-coin/package.py b/var/spack/repos/builtin/packages/r-coin/package.py index 0ea41175c6..857799c03d 100644 --- a/var/spack/repos/builtin/packages/r-coin/package.py +++ b/var/spack/repos/builtin/packages/r-coin/package.py @@ -17,6 +17,7 @@ class RCoin(RPackage): license("GPL-2.0-only") + version("1.4-3", sha256="8a6302dbf3ef570cd9f69ce7b6cd3d3b928dc776f840bbd767af132e0080b974") version("1.4-2", sha256="7546d1f27a82d98b4b3e43e4659eba0f74a67d5919ce85d2fb360282ba3cfbb2") version("1.3-1", sha256="5de2519a6e2b059bba9d74c58085cccaff1aaaa0454586ed164a108ebd1b2062") version("1.3-0", sha256="adcebb37e0a7dfddbf8ec1e09c12a809bd76d90b5b8ff2b1048a75252ba11ef8") diff --git a/var/spack/repos/builtin/packages/r-colorspace/package.py b/var/spack/repos/builtin/packages/r-colorspace/package.py index b5d6797bda..f0c3b42f1c 100644 --- a/var/spack/repos/builtin/packages/r-colorspace/package.py +++ b/var/spack/repos/builtin/packages/r-colorspace/package.py @@ -29,6 +29,7 @@ class RColorspace(RPackage): license("BSD-3-Clause") + version("2.1-1", sha256="e721cee5f4d6e4b0fc8eb18265e316b4f856fd3be02f0775a26032663758cd0b") version("2.1-0", sha256="04078abb6b54119c90dc7085d62916bf292ccb163e213f9ea70567d1be82614c") version("2.0-3", sha256="e75681cc4dd6e4b70303fd96a6d4597065dc6bffcaa4ae4244b73ff19016857f") version("2.0-2", sha256="b891cd2ec129ed5f116429345947bcaadc33969758a108521eb0cf36bd12183a") diff --git a/var/spack/repos/builtin/packages/r-commonmark/package.py b/var/spack/repos/builtin/packages/r-commonmark/package.py index e06c44e2ac..63ca1a3691 100644 --- a/var/spack/repos/builtin/packages/r-commonmark/package.py +++ b/var/spack/repos/builtin/packages/r-commonmark/package.py @@ -20,6 +20,7 @@ class RCommonmark(RPackage): license("BSD-2-Clause") + version("1.9.1", sha256="9517a13f4ce4a99bb157493453b04419b222cb65a9471cd3b11e5045ac0db53b") version("1.9.0", sha256="6dd01a5a26c8d436486abf69c2f6ad0f8dd1c811f575c31983aeb4dbd376548f") version("1.8.1", sha256="96adcb093de3d2e48811af402da70e7222a313b97f1e979e0cbe84dd59bd5cbe") version("1.8.0", sha256="7d07e72937b1cf158e69f183722bf79dbb91b8967a9dd29f4fa145500c2be668") diff --git a/var/spack/repos/builtin/packages/r-compositions/package.py b/var/spack/repos/builtin/packages/r-compositions/package.py index 03906a4d14..435acef76c 100644 --- a/var/spack/repos/builtin/packages/r-compositions/package.py +++ b/var/spack/repos/builtin/packages/r-compositions/package.py @@ -17,6 +17,7 @@ class RCompositions(RPackage): license("GPL-2.0-or-later") + version("2.0-8", sha256="c5063488f456992b5821458b3237322addffd3451ae91f9474707886971ef290") version("2.0-6", sha256="45d374ebfdcc2c9f6cc738d196caf83a2297ed2aefe2cc99007fcbeb78a61c34") version("2.0-4", sha256="7b9c7a3bf654fb02d9eb1b4a7566469b2f5232f3b2c1b324c02239fd31060faf") version("2.0-1", sha256="84a291308faf858e5a9d9570135c2da5e57b0887f407903485fa85d09da61a0f") @@ -28,6 +29,6 @@ class RCompositions(RPackage): depends_on("r-tensora", type=("build", "run")) depends_on("r-robustbase", type=("build", "run")) depends_on("r-bayesm", type=("build", "run")) - depends_on("r-mass", type=("build", "run"), when="@2.0-1:") + depends_on("r-mass", type=("build", "run"), when="@2.0-0:") - depends_on("r-energy", type=("build", "run"), when="@:1.40-2") + depends_on("r-energy", type=("build", "run"), when="@:1.40-5") diff --git a/var/spack/repos/builtin/packages/r-consrank/package.py b/var/spack/repos/builtin/packages/r-consrank/package.py new file mode 100644 index 0000000000..239fde3bd3 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-consrank/package.py @@ -0,0 +1,23 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RConsrank(RPackage): + """Compute the median ranking according to the Kemeny's axiomatic approach.""" + + homepage = "https://www.r-project.org/" + cran = "ConsRank" + + license("GPL-3.0-or-later", checked_by="wdconinc") + + version("2.1.4", sha256="c213c6008fcb617a2144d75b41b25520ffadcf38686cc5050e10ce1363ac3000") + + depends_on("r-rgl", type=("build", "run")) + depends_on("r-rlist@0.4.2:", type=("build", "run")) + depends_on("r-proxy", type=("build", "run")) + depends_on("r-gtools", type=("build", "run")) + depends_on("r-tidyr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-construct/package.py b/var/spack/repos/builtin/packages/r-construct/package.py index 14f97e5aea..3b81c3cdc7 100644 --- a/var/spack/repos/builtin/packages/r-construct/package.py +++ b/var/spack/repos/builtin/packages/r-construct/package.py @@ -18,6 +18,7 @@ class RConstruct(RPackage): cran = "conStruct" + version("1.0.6", sha256="110982ed8036ccefb6bf662909779521e1b9095e9e0b5b99973df23171a5b502") version("1.0.5", sha256="4d953073bd1f374a91655b4889ab1b65d92a1c89ea39eb3dac5cd852a42b8a7c") version("1.0.4", sha256="4e585b718a361061bc1432cea46fc65f802fb0ef58e4516d33e1af99bbfe90ce") version("1.0.3", sha256="b449c133a944ad05a28f84f312ed4ccbc1574c4659aa09c678618d2ae9008310") @@ -26,12 +27,14 @@ class RConstruct(RPackage): depends_on("r@3.4.0:", type=("build", "run")) depends_on("r-rcpp@0.12.0:", type=("build", "run")) depends_on("r-rstan@2.18.1:", type=("build", "run")) + depends_on("r-rstan@2.26.0:", type=("build", "run"), when="@1.0.6:") depends_on("r-rstantools@1.5.0:", type=("build", "run")) depends_on("r-caroline", type=("build", "run")) depends_on("r-gtools", type=("build", "run")) depends_on("r-foreach", type=("build", "run")) depends_on("r-doparallel", type=("build", "run")) depends_on("r-stanheaders@2.18.0:", type=("build", "run")) + depends_on("r-stanheaders@2.26.0:", type=("build", "run"), when="@1.0.6:") depends_on("r-bh@1.66.0:", type=("build", "run")) depends_on("r-rcppeigen@0.3.3.3.0:", type=("build", "run")) depends_on("r-rcppparallel@5.0.1:", type=("build", "run"), when="@1.0.5:") diff --git a/var/spack/repos/builtin/packages/r-convevol/package.py b/var/spack/repos/builtin/packages/r-convevol/package.py index 6dbcbc60cf..4f660abb02 100644 --- a/var/spack/repos/builtin/packages/r-convevol/package.py +++ b/var/spack/repos/builtin/packages/r-convevol/package.py @@ -18,6 +18,7 @@ class RConvevol(RPackage): license("GPL-2.0-only") + version("2.2.1", sha256="9b197d8735e61f78825ec2d81380b0f4352a3783c2c51254f4eb415ab45a9b48") version("2.0.0", sha256="690664b93c1f144a409e80b2ebfc20dc34f0eb9405607d15e066e8db573e84de") version("1.3", sha256="d6b24b9796a559f5280e277746189d141151ade4b14cc6b4c2d9d496d7f314ac") @@ -25,5 +26,7 @@ class RConvevol(RPackage): depends_on("r-ape", type=("build", "run")) depends_on("r-cluster", type=("build", "run")) depends_on("r-geiger", type=("build", "run")) - depends_on("r-mass", type=("build", "run")) + depends_on("r-magick", type=("build", "run"), when="@2.2.0:") depends_on("r-phytools", type=("build", "run")) + + depends_on("r-mass", type=("build", "run"), when="@:2.1") diff --git a/var/spack/repos/builtin/packages/r-copula/package.py b/var/spack/repos/builtin/packages/r-copula/package.py index 79f7bee361..c4ca7bbfcd 100644 --- a/var/spack/repos/builtin/packages/r-copula/package.py +++ b/var/spack/repos/builtin/packages/r-copula/package.py @@ -26,6 +26,7 @@ class RCopula(RPackage): license("GPL-3.0-or-later OR custom") + version("1.1-4", sha256="f4d78b7f4860797620dfe15c62cbeeb319b2dbbacab75062652d467c4ef6504f") version("1.1-2", sha256="88f9454d25e4dcdf53d8ca5156daf48e664769f5e13b1e835ed64f37251587d3") version("1.1-0", sha256="9ab76e6256534db2a18d3880143b8c67e385767010de861bbde25212aa75d924") version("1.0-1", sha256="d09b2ccffc7379e48b00952aa6b282baf502feebaf55cc44e93f881d7b909742") diff --git a/var/spack/repos/builtin/packages/r-corrplot/package.py b/var/spack/repos/builtin/packages/r-corrplot/package.py index dd132968c1..8313ed99b3 100644 --- a/var/spack/repos/builtin/packages/r-corrplot/package.py +++ b/var/spack/repos/builtin/packages/r-corrplot/package.py @@ -17,6 +17,7 @@ class RCorrplot(RPackage): license("MIT") + version("0.94", sha256="8e855daf7392dfec8dab7da2845b6d01e24030837a66ce7d8d4673eb0a7e55f4") version("0.92", sha256="e8c09f963f9c4837036c439ebfe00fa3a6e462ccbb786d2cf90850ddcd9428bd") version("0.84", sha256="0dce5e628ead9045580a191f60c58fd7c75b4bbfaaa3307678fc9ed550c303cc") version("0.77", sha256="54b66ff995eaf2eee3f3002509c6f27bb5bd970b0abde41893ed9387e93828d3") diff --git a/var/spack/repos/builtin/packages/r-countrycode/package.py b/var/spack/repos/builtin/packages/r-countrycode/package.py index f0a9746bc7..e6fe87390d 100644 --- a/var/spack/repos/builtin/packages/r-countrycode/package.py +++ b/var/spack/repos/builtin/packages/r-countrycode/package.py @@ -16,6 +16,7 @@ class RCountrycode(RPackage): license("GPL-3.0-only") + version("1.6.0", sha256="f9db110e32c0bcc90eed85303277660de37a777681bb78e8898b6fc5f2253db6") version("1.4.0", sha256="99dfe7652c1e631b9e0f8fac0b0163e7a3fdde8476498555d553e0d1c5fdccc4") version("1.3.0", sha256="34361416e771ece1d56dc56f79416c8b7f9591885773becae270684d095bc70f") version("1.2.0", sha256="32c65702dcc33d512ff99f14c12f4e0c48fe7ed7c8aa2f0a64194576d129dd40") diff --git a/var/spack/repos/builtin/packages/r-covr/package.py b/var/spack/repos/builtin/packages/r-covr/package.py index 70d3c8adc8..b989c17a9f 100644 --- a/var/spack/repos/builtin/packages/r-covr/package.py +++ b/var/spack/repos/builtin/packages/r-covr/package.py @@ -21,6 +21,7 @@ class RCovr(RPackage): license("MIT") + version("3.6.4", sha256="2b6204036510c629d0b1d58daaee34d4e38baf54164f8d4c9afd6d6b1fb1862a") version("3.6.2", sha256="ace68ce7516147b4d77f591a498cbd7b2803062c1b47252e7a35081af0ea485b") version("3.6.1", sha256="ffbe15438c1a4f274c14cacfb944480e284f1ab60808d5e840c015cc57c51157") version("3.5.1", sha256="a54cfc3623ea56084158ac5d7fe33f216f45191f6dcddab9c9ed4ec1d9d8ac6c") diff --git a/var/spack/repos/builtin/packages/r-cowplot/package.py b/var/spack/repos/builtin/packages/r-cowplot/package.py index a70068b2f3..3666e21891 100644 --- a/var/spack/repos/builtin/packages/r-cowplot/package.py +++ b/var/spack/repos/builtin/packages/r-cowplot/package.py @@ -21,6 +21,7 @@ class RCowplot(RPackage): license("GPL-2.0-only") + version("1.1.3", sha256="8756971af5c50381cf00ec7ed622fd5cf3d70f534bdfa3ebadd157b5aef5b273") version("1.1.1", sha256="c7dce625b456dffc59ba100c816e16226048d12fdd29a7335dc1f6f6e12eed48") version("1.0.0", sha256="70f9a7c46d10f409d1599f1afc9fd3c947051cf2b430f01d903c64ef1e6c98a5") version("0.9.3", sha256="3e10475fd7506ea9297ed72eb1a3acf858c6fa99d26e46fc39654eba000c3dcb") @@ -33,6 +34,7 @@ class RCowplot(RPackage): depends_on("r@3.5.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-ggplot2@2.1.1:", type=("build", "run")) depends_on("r-ggplot2@2.2.1:", type=("build", "run"), when="@1.1.1:") + depends_on("r-ggplot2@3.4.0:", type=("build", "run"), when="@1.1.2:") depends_on("r-gtable", type=("build", "run")) depends_on("r-rlang", type=("build", "run"), when="@1.0.0:") depends_on("r-scales", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-cpp11/package.py b/var/spack/repos/builtin/packages/r-cpp11/package.py index 4a36d4ce11..5bbad8485e 100644 --- a/var/spack/repos/builtin/packages/r-cpp11/package.py +++ b/var/spack/repos/builtin/packages/r-cpp11/package.py @@ -18,7 +18,10 @@ class RCpp11(RPackage): license("MIT") + version("0.4.7", sha256="801d1266824c3972642bce2db2a5fd0528a65ec845c58eb5a886edf082264344") version("0.4.3", sha256="f1a60e4971a86dbbcf6a16bbd739b59bb66d9c45d93cfd8dedc2a87e302598f1") version("0.4.2", sha256="403ce0bf82358d237176053b0fb1e958cb6bfa4d0fb3555bf5801db6a6939b99") version("0.4.0", sha256="1768fd07dc30dfbbf8f3fb1a1183947cb7e1dfd909165c4d612a63c163a41e87") version("0.2.5", sha256="6fef9306c0c3043252c987e77c99ef679b2ea46dffafae318dbeb38ad21a2e20") + + depends_on("r@3.5.0:", when="@0.4.6:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-crayon/package.py b/var/spack/repos/builtin/packages/r-crayon/package.py index 23db2f98c1..087de49d92 100644 --- a/var/spack/repos/builtin/packages/r-crayon/package.py +++ b/var/spack/repos/builtin/packages/r-crayon/package.py @@ -19,6 +19,7 @@ class RCrayon(RPackage): license("MIT") + version("1.5.3", sha256="3e74a0685541efb5ea763b92cfd5c859df71c46b0605967a0b5dbb7326e9da69") version("1.5.2", sha256="70a9a505b5b3c0ee6682ad8b965e28b7e24d9f942160d0a2bad18eec22b45a7a") version("1.5.1", sha256="c025c73b78a8e88e8e4363c8e1a941da5089a7baea39e59ea5342ab9ebe45df9") version("1.4.2", sha256="ee34397f643e76e30588068d4c93bd3c9afd2193deacccacb3bffcadf141b857") diff --git a/var/spack/repos/builtin/packages/r-credentials/package.py b/var/spack/repos/builtin/packages/r-credentials/package.py index 8ac8114ba6..42f4e0ea42 100644 --- a/var/spack/repos/builtin/packages/r-credentials/package.py +++ b/var/spack/repos/builtin/packages/r-credentials/package.py @@ -21,6 +21,7 @@ class RCredentials(RPackage): license("MIT") + version("2.0.1", sha256="2c7cfc45bd4afa9a2c2b85d43e907b212da3468781e1b617737bd095253c358b") version("1.3.2", sha256="2ffa7c11bedbfa034adf553d0a2f2e4f6a496b858af753a09a89219cff9028b8") version("1.3.0", sha256="c119ec26fd97b977c3b0cd1eb8fad3c59b84df6262c3adbf5ee9f3d6c9903ff1") diff --git a/var/spack/repos/builtin/packages/r-crosstalk/package.py b/var/spack/repos/builtin/packages/r-crosstalk/package.py index 1009261d8c..352064eb78 100644 --- a/var/spack/repos/builtin/packages/r-crosstalk/package.py +++ b/var/spack/repos/builtin/packages/r-crosstalk/package.py @@ -17,6 +17,7 @@ class RCrosstalk(RPackage): license("MIT") + version("1.2.1", sha256="680cf08416d6d5a1194dd85ee5695c268af9d4d01b201448e1d486c6e06014f1") version("1.2.0", sha256="4237baab35cd246a8a98fb9cf4ce53b6ddbc31d00742ded4edea0479613d1ea0") version("1.1.0.1", sha256="36a70b10bc11826e314c05f9579fd791b9ac3b3a2cfed4d4ca74ce1ad991300e") version("1.0.0", sha256="b31eada24cac26f24c9763d9a8cbe0adfd87b264cf57f8725027fe0c7742ca51") diff --git a/var/spack/repos/builtin/packages/r-crul/package.py b/var/spack/repos/builtin/packages/r-crul/package.py index c7e94bb9af..ac399ca1e4 100644 --- a/var/spack/repos/builtin/packages/r-crul/package.py +++ b/var/spack/repos/builtin/packages/r-crul/package.py @@ -20,6 +20,7 @@ class RCrul(RPackage): license("MIT") + version("1.5.0", sha256="db733778d2815f9d974b00e8df7c821cd638e069e08d73adfa606add201ebd9d") version("1.3", sha256="8058617d8b3724acb5b89d0e6e63f381df5c56565128b250a65eceb2b8081e2d") version("1.2.0", sha256="be1a149b21cf219ef55adfb56a6a5eb9892a9acf0d5f5421a22e52f2a7066f8c") version("1.0.0", sha256="2ade500f6cf89b2d0ca8496b8d4df9937d6f802a35c9ad10d9fab8632cdb1027") diff --git a/var/spack/repos/builtin/packages/r-cubature/package.py b/var/spack/repos/builtin/packages/r-cubature/package.py index 23a01172eb..d00dfb9d66 100644 --- a/var/spack/repos/builtin/packages/r-cubature/package.py +++ b/var/spack/repos/builtin/packages/r-cubature/package.py @@ -20,6 +20,7 @@ class RCubature(RPackage): license("GPL-3.0-only") + version("2.1.1", sha256="b37220e733f4e610e089e69896f66dc5bc461478a040321c19600ec5d07ea684") version("2.0.4.6", sha256="330c9dc2be9bf6815473fd40efa8c2de47c1ed286cb097d0ff846b56c9e9f95a") version("2.0.4.5", sha256="a81f118e5b7950a4a29e5509f8a40d7b87544fb25783917242000561379c9023") version("2.0.4.4", sha256="087b3b2c4f25d873fa95e9d38766a17a7201d03a6f4960f1e080a8db8b67d569") diff --git a/var/spack/repos/builtin/packages/r-cubist/package.py b/var/spack/repos/builtin/packages/r-cubist/package.py index 1a753e9285..5467bc8701 100644 --- a/var/spack/repos/builtin/packages/r-cubist/package.py +++ b/var/spack/repos/builtin/packages/r-cubist/package.py @@ -13,6 +13,7 @@ class RCubist(RPackage): cran = "Cubist" + version("0.4.4", sha256="51d5fff104b69de75e08a3e14eaf67ff13ffda5be4b60f79236793475c241590") version("0.4.2.1", sha256="f07afed59019a3febc04acc3e58728e42b42910940a1d529f9fc482931d09157") version("0.4.0", sha256="3a1f74d44300e3a38a10e3693fc019cfcca221d62d7c416abebb20811e965578") version("0.3.0", sha256="88a76e7f858a8e978a73a97ce6a3504201d889517b39ce862cef734dcf9eb263") diff --git a/var/spack/repos/builtin/packages/r-curl/package.py b/var/spack/repos/builtin/packages/r-curl/package.py index 20b768c144..c9a7978dd2 100644 --- a/var/spack/repos/builtin/packages/r-curl/package.py +++ b/var/spack/repos/builtin/packages/r-curl/package.py @@ -23,6 +23,7 @@ class RCurl(RPackage): license("MIT") + version("5.2.1", sha256="4a7a4d8c08aa1bca2fcd9c58ade7b4b0ea2ed9076d0521071be29baac8adfa90") version("5.0.0", sha256="d7f3cac9b513914ffa8f6f64e6fa5dd96c8273378ace6b0c16b71bc6ba59c9b2") version("4.3.3", sha256="3567b6acad40dad68acfe07511c853824839d451a50219a96dd6d125ed617c9e") version("4.3.2", sha256="90b1facb4be8b6315bb3d272ba2dd90b88973f6ea1ab7f439550230f8500a568") diff --git a/var/spack/repos/builtin/packages/r-cvxr/package.py b/var/spack/repos/builtin/packages/r-cvxr/package.py index 20ace982f7..d12dc088cf 100644 --- a/var/spack/repos/builtin/packages/r-cvxr/package.py +++ b/var/spack/repos/builtin/packages/r-cvxr/package.py @@ -22,13 +22,15 @@ class RCvxr(RPackage): license("Apache-2.0") + version("1.0-14", sha256="4d027cc2b933720ded4edcc098fde1259992673825abdb109fd84fee4af57cdb") version("1.0-11", sha256="e92a9638f35f4909e2a29c3b7106081e3dae7ff88b14bb6466b87fbdc80b972a") depends_on("r@3.4.0:", type=("build", "run")) depends_on("r-r6", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) - depends_on("r-rcpp", type=("build", "run")) + depends_on("r-rcpp@0.12.12:", type=("build", "run")) depends_on("r-bit64", type=("build", "run")) + depends_on("r-clarabel@0.9.0:", type=("build", "run"), when="@1.0-14:") depends_on("r-gmp", type=("build", "run")) depends_on("r-rmpfr", type=("build", "run")) depends_on("r-ecosolver@0.5.4:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-data-table/package.py b/var/spack/repos/builtin/packages/r-data-table/package.py index 425c739112..c80fffb708 100644 --- a/var/spack/repos/builtin/packages/r-data-table/package.py +++ b/var/spack/repos/builtin/packages/r-data-table/package.py @@ -18,6 +18,7 @@ class RDataTable(RPackage): license("MPL-2.0-no-copyleft-exception") + version("1.15.4", sha256="ab8065ff946d59ecaaf5eaf91a975495c07c30caad97a71205c72e41a740cb53") version("1.14.8", sha256="14b2ce5367df9c9bb58f373555066f5dcb629c156149b5565de36d69557139fd") version("1.14.4", sha256="4862a7c26e8309108fd1f5296616407b9ff9e4e1be5cdedcb717f114c2e348f0") version("1.14.2", sha256="f741b951e5937440139514aedbae78dbd6862d825066848bdb006aa02c2f3d2b") diff --git a/var/spack/repos/builtin/packages/r-dbi/package.py b/var/spack/repos/builtin/packages/r-dbi/package.py index bab7446c76..1eafed4f13 100644 --- a/var/spack/repos/builtin/packages/r-dbi/package.py +++ b/var/spack/repos/builtin/packages/r-dbi/package.py @@ -15,6 +15,7 @@ class RDbi(RPackage): cran = "DBI" + version("1.2.3", sha256="cf6708a7566a80929f06575aa345fae354714159ed5fab5db14306fc5d0d2dbe") version("1.1.3", sha256="38bb33753da5bddb78893a5228a5d269dae3bf16f21dc5d9853ac9c24d31428d") version("1.1.2", sha256="56ec377d471c76ac234ddfd313bd01a050c99fb6fa5f704f5333b34a5d714f58") version("1.1.1", sha256="572ab3b8a6421d0ac3e7665c4c842826f1723af98fca25d4f43edb419e771344") diff --git a/var/spack/repos/builtin/packages/r-dbplyr/package.py b/var/spack/repos/builtin/packages/r-dbplyr/package.py index 5841bc5e46..566669b469 100644 --- a/var/spack/repos/builtin/packages/r-dbplyr/package.py +++ b/var/spack/repos/builtin/packages/r-dbplyr/package.py @@ -18,6 +18,7 @@ class RDbplyr(RPackage): license("MIT") + version("2.5.0", sha256="bb475bdbe89487b189ecc257b5c92007a7458803c81aa77bfc4ed46f5f24bcff") version("2.3.2", sha256="0ddc00595ec6b21962d0bb6f470f5f7c9d61c74a4f92681a37e94e1295707fac") version("2.2.1", sha256="a6f3f644c068fe1a3b3e99a3a10de55a150d43ef20b5130e6724d142afcb0df7") version("2.1.1", sha256="aba4cf47b85ab240fd3ec4cd8d512f6e1958201e151577c1a2ebc3d6ebc5bc08") @@ -30,34 +31,45 @@ class RDbplyr(RPackage): version("1.1.0", sha256="7b1e456a2d1056fa6284582cd82d2df66d06b3eea92e9995f5a91a45f246f69d") depends_on("r@3.1:", type=("build", "run")) + depends_on("r@3.6:", type=("build", "run"), when="@2.4.0:") depends_on("r-blob@1.2.0:", type=("build", "run"), when="@2.0.0:") depends_on("r-cli@3.3.0:", type=("build", "run"), when="@2.2.1:") depends_on("r-cli@3.4.1:", type=("build", "run"), when="@2.3.2:") + depends_on("r-cli@3.6.1:", type=("build", "run"), when="@2.4.0:") depends_on("r-dbi@1.0.0:", type=("build", "run")) + depends_on("r-dbi@1.1.3:", type=("build", "run"), when="@2.4.0:") depends_on("r-dplyr@0.8.0:", type=("build", "run")) depends_on("r-dplyr@1.0.3:", type=("build", "run"), when="@2.1.0") depends_on("r-dplyr@1.0.4:", type=("build", "run"), when="@2.1.1:") depends_on("r-dplyr@1.0.9:", type=("build", "run"), when="@2.2.1:") depends_on("r-dplyr@1.1.0:", type=("build", "run"), when="@2.3.2:") + depends_on("r-dplyr@1.1.2:", type=("build", "run"), when="@2.4.0:") depends_on("r-glue@1.2.0:", type=("build", "run")) + depends_on("r-glue@1.6.2:", type=("build", "run"), when="@2.4.0:") depends_on("r-lifecycle", type=("build", "run"), when="@2.0.0:") depends_on("r-lifecycle@1.0.0:", type=("build", "run"), when="@2.1.1:") depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@2.3.2:") depends_on("r-magrittr", type=("build", "run"), when="@2.0.0:") depends_on("r-pillar@1.5.0:", type=("build", "run"), when="@2.2.1:") + depends_on("r-pillar@1.9.0:", type=("build", "run"), when="@2.4.0:") depends_on("r-purrr@0.2.5:", type=("build", "run")) depends_on("r-purrr@1.0.1:", type=("build", "run"), when="@2.3.2:") depends_on("r-r6@2.2.2:", type=("build", "run")) depends_on("r-rlang@0.2.0:", type=("build", "run")) depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@2.2.1:") depends_on("r-rlang@1.0.6:", type=("build", "run"), when="@2.3.2:") + depends_on("r-rlang@1.1.1:", type=("build", "run"), when="@2.4.0:") depends_on("r-tibble@1.4.2:", type=("build", "run")) + depends_on("r-tibble@3.2.1:", type=("build", "run"), when="@2.4.0:") depends_on("r-tidyr@1.3.0:", type=("build", "run"), when="@2.3.2:") depends_on("r-tidyselect@0.2.4:", type=("build", "run")) depends_on("r-tidyselect@1.2.0:", type=("build", "run"), when="@2.3.2:") + depends_on("r-tidyselect@1.2.1:", type=("build", "run"), when="@2.4.0:") depends_on("r-vctrs", type=("build", "run"), when="@2.1:") depends_on("r-vctrs@0.4.1:", type=("build", "run"), when="@2.2.1:") depends_on("r-vctrs@0.5.0:", type=("build", "run"), when="@2.3.2:") + depends_on("r-vctrs@0.6.3:", type=("build", "run"), when="@2.4.0:") depends_on("r-withr", type=("build", "run"), when="@2.0.0:") + depends_on("r-withr@2.5.0:", type=("build", "run"), when="@2.4.0:") depends_on("r-ellipsis", type=("build", "run"), when="@2.1.1") depends_on("r-assertthat", type=("build", "run"), when="@:2.2.1") diff --git a/var/spack/repos/builtin/packages/r-debugme/package.py b/var/spack/repos/builtin/packages/r-debugme/package.py index d17b8edc74..f74474f444 100644 --- a/var/spack/repos/builtin/packages/r-debugme/package.py +++ b/var/spack/repos/builtin/packages/r-debugme/package.py @@ -16,6 +16,8 @@ class RDebugme(RPackage): license("MIT") + version("1.2.0", sha256="b22605ad3b20d460308d8c9c18116e56c4d6ff10577608eaf58802998171f099") version("1.1.0", sha256="4dae0e2450d6689a6eab560e36f8a7c63853abbab64994028220b8fd4b793ab1") + depends_on("r@3.6:", type=("build", "run"), when="@1.2.0:") depends_on("r-crayon", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-deldir/package.py b/var/spack/repos/builtin/packages/r-deldir/package.py index 4bc422d960..32d433d942 100644 --- a/var/spack/repos/builtin/packages/r-deldir/package.py +++ b/var/spack/repos/builtin/packages/r-deldir/package.py @@ -19,6 +19,7 @@ class RDeldir(RPackage): license("GPL-2.0-or-later") + version("2.0-4", sha256="d418acb28ec3707b6d64c7466d0cefbb49b098537f37558d8f7a5befd34a4653") version("1.0-6", sha256="6df6d8325c607e0b7d63cbc53c29e774eff95ad4acf9c7ec8f70693b0505f8c5") version("0.2-3", sha256="2d24800f5ec6ad9dc57b9b265365b29c07717f4562d8f3e6344336d3340c364e") version("0.1-23", sha256="e0112bce9fc94daf73596a0fff9b3958b80872e3bbb487be73e157b13a6f201d") diff --git a/var/spack/repos/builtin/packages/r-deoptimr/package.py b/var/spack/repos/builtin/packages/r-deoptimr/package.py index d2de544381..8fcfa4dfa7 100644 --- a/var/spack/repos/builtin/packages/r-deoptimr/package.py +++ b/var/spack/repos/builtin/packages/r-deoptimr/package.py @@ -19,6 +19,7 @@ class RDeoptimr(RPackage): cran = "DEoptimR" + version("1.1-3", sha256="8dd8a61b07b02022493d7021dc62ef2c4dc2d596cff897846713c5f8dd784694") version("1.0-12", sha256="6136f98031bceaa691c5725222eca2d0f750a7b7fb60216480633635a9613d79") version("1.0-11", sha256="1874b30f4b75f9bfa891986598f1ebe1fce27fdced14f8f417d3535cac08165b") version("1.0-10", sha256="774f7ba0ac9c73aaab4567024b98afdb58098905726e72bceeeb9e380e782ad5") diff --git a/var/spack/repos/builtin/packages/r-desc/package.py b/var/spack/repos/builtin/packages/r-desc/package.py index 2fb79bce33..c56459871e 100644 --- a/var/spack/repos/builtin/packages/r-desc/package.py +++ b/var/spack/repos/builtin/packages/r-desc/package.py @@ -16,6 +16,7 @@ class RDesc(RPackage): license("MIT") + version("1.4.3", sha256="54468da73dd78fc9e7c565c41cfe3331802c2134b2e61a9ad197215317092f26") version("1.4.2", sha256="758acf14be478c09ba7e84ade3a7ce512becf35d44e5e6a997b932065f2a227c") version("1.4.1", sha256="8f9ebb51eccf925b2e76bc65ecf495e8f3882b8c0053023f396622f0402d6f54") version("1.4.0", sha256="8220e4c706449b8121b822e70b1414f391ef419aed574836a234c63b83e5d649") @@ -25,7 +26,7 @@ class RDesc(RPackage): depends_on("r@3.4:", type=("build", "run"), when="@1.4.1:") depends_on("r-cli", type=("build", "run"), when="@1.4.1:") depends_on("r-r6", type=("build", "run")) - depends_on("r-rprojroot", type=("build", "run")) + depends_on("r-rprojroot", type=("build", "run"), when="@:1.4.2") depends_on("r-assertthat", type=("build", "run"), when="@:1.2") depends_on("r-crayon", type=("build", "run"), when="@:1.4.0") diff --git a/var/spack/repos/builtin/packages/r-desolve/package.py b/var/spack/repos/builtin/packages/r-desolve/package.py index 45407eb75a..2b64e6e85b 100644 --- a/var/spack/repos/builtin/packages/r-desolve/package.py +++ b/var/spack/repos/builtin/packages/r-desolve/package.py @@ -23,6 +23,7 @@ class RDesolve(RPackage): cran = "deSolve" + version("1.40", sha256="8c09ae6bb6875b569b9844eede30b790f39fc227f5c9d045fa63ce1b22f500ef") version("1.35", sha256="96f17f497713754f84ff56c3538c6d05b9f5229f9a2a32aafec7d7cdc721d488") version("1.34", sha256="2254305f44dde22ac685fef4c60e29a0608af0197c803107365d1d80b75c9f21") version("1.33", sha256="71de979e05ce7e472308ac5218e97efe976051364ba579b10940dc1fe4c8b684") diff --git a/var/spack/repos/builtin/packages/r-diagrammer/package.py b/var/spack/repos/builtin/packages/r-diagrammer/package.py index 4e71673b05..76de9e965d 100644 --- a/var/spack/repos/builtin/packages/r-diagrammer/package.py +++ b/var/spack/repos/builtin/packages/r-diagrammer/package.py @@ -18,6 +18,7 @@ class RDiagrammer(RPackage): cran = "DiagrammeR" + version("1.0.11", sha256="e873e3d6e198232408161661001ddcb04c9a56065bb4703c925e538462f4c4df") version("1.0.9", sha256="64a426fe27110dddd8b0c1223ae4c397a2e553ae5e81ddd4ff67c026cfc40abf") version("1.0.8", sha256="b9157b26215edda4fe0a1b9330a597d5b01a5d7e660a9832f593b87c584dd233") version("1.0.7", sha256="6af291a7136657b9f7c67b96cd7f3afe99662cf5a477ebbb213a6c53df623050") @@ -28,10 +29,10 @@ class RDiagrammer(RPackage): depends_on("r@3.2.0:", type=("build", "run"), when="@0.9.2:") depends_on("r@3.5.0:", type=("build", "run"), when="@1.0.7") + depends_on("r-cli", type=("build", "run"), when="@1.0.11:") depends_on("r-dplyr@0.7.4:", type=("build", "run"), when="@1.0.0:") depends_on("r-dplyr@0.7.6:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-dplyr@1.0.7:", type=("build", "run"), when="@1.0.7:") - depends_on("r-downloader@0.4:", type=("build", "run"), when="@1.0.0:") depends_on("r-glue@1.2.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-glue@1.3.0:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-glue@1.5.0:", type=("build", "run"), when="@1.0.7:") @@ -43,8 +44,7 @@ class RDiagrammer(RPackage): depends_on("r-igraph@1.1.2:", type=("build", "run")) depends_on("r-igraph@1.2.2:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-igraph@1.2.11:", type=("build", "run"), when="@1.0.7:") - depends_on("r-influencer@0.1.0:", type=("build", "run")) - depends_on("r-influencer@0.1.0.1:", type=("build", "run"), when="@1.0.7:") + depends_on("r-igraph@1.4.0:", type=("build", "run"), when="@1.0.11:") depends_on("r-magrittr@1.5:", type=("build", "run"), when="@1.0.0:") depends_on("r-purrr@0.2.4:", type=("build", "run"), when="@1.0.0:") depends_on("r-purrr@0.2.5:", type=("build", "run"), when="@1.0.6.1:") @@ -55,6 +55,7 @@ class RDiagrammer(RPackage): depends_on("r-rlang@0.2.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-rlang@0.2.2:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-rlang@0.4:", type=("build", "run"), when="@1.0.7:") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.0.11:") depends_on("r-rstudioapi@0.7:", type=("build", "run")) depends_on("r-scales@0.5.0:", type=("build", "run")) depends_on("r-scales@1.0.0:", type=("build", "run"), when="@1.0.6.1:") @@ -67,11 +68,15 @@ class RDiagrammer(RPackage): depends_on("r-tidyr@0.8.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-tidyr@0.8.1:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-tidyr@1.1:", type=("build", "run"), when="@1.0.7:") - depends_on("r-viridis@0.5.0:", type=("build", "run"), when="@1.0.0:") - depends_on("r-viridis@0.5.1:", type=("build", "run"), when="@1.0.6.1:") - depends_on("r-viridis@0.6.2:", type=("build", "run"), when="@1.0.7:") + depends_on("r-viridislite@0.4.2:", type=("build", "run"), when="@1.0.11:") depends_on("r-visnetwork@2.0.3:", type=("build", "run")) depends_on("r-visnetwork@2.0.4:", type=("build", "run"), when="@1.0.6.1:") depends_on("r-visnetwork@2.1.0:", type=("build", "run"), when="@1.0.7:") + depends_on("r-downloader@0.4:", type=("build", "run"), when="@1.0.0:1.0.10") + depends_on("r-influencer@0.1.0:", type=("build", "run"), when="@:1.0.9") + depends_on("r-influencer@0.1.0.1:", type=("build", "run"), when="@1.0.7:1.0.9") + depends_on("r-viridis@0.5.0:", type=("build", "run"), when="@1.0.0:1.0.10") + depends_on("r-viridis@0.5.1:", type=("build", "run"), when="@1.0.6.1:1.0.10") + depends_on("r-viridis@0.6.2:", type=("build", "run"), when="@1.0.7:1.0.10") depends_on("r-rgexf@0.15.3:", type=("build", "run"), when="@1.0.0:1.0.1") diff --git a/var/spack/repos/builtin/packages/r-digest/package.py b/var/spack/repos/builtin/packages/r-digest/package.py index 48150288b8..e41ec4e9df 100644 --- a/var/spack/repos/builtin/packages/r-digest/package.py +++ b/var/spack/repos/builtin/packages/r-digest/package.py @@ -30,6 +30,7 @@ class RDigest(RPackage): license("GPL-2.0-or-later") + version("0.6.37", sha256="82c4d149994b8a4a9af930f5a8e47420829935abed41f3f9030e94b6a48f0321") version("0.6.31", sha256="5a284f490eaca6750f695f00a584cfca3f180ca1046ac1107202141149d431b9") version("0.6.30", sha256="7b8059943be7dba6053268dfcc229de1bb0b55db497b2943541a6abace076aa7") version("0.6.29", sha256="792c1f14a4c8047745152f5e45ce7351978af8d770c29d2ea39c7acd5d619cd9") diff --git a/var/spack/repos/builtin/packages/r-diptest/package.py b/var/spack/repos/builtin/packages/r-diptest/package.py index c862c0b74d..30f2f17795 100644 --- a/var/spack/repos/builtin/packages/r-diptest/package.py +++ b/var/spack/repos/builtin/packages/r-diptest/package.py @@ -17,5 +17,6 @@ class RDiptest(RPackage): license("GPL-2.0-or-later") + version("0.77-1", sha256="224eae00f483ce0fb131719065667227417cc98ad2beda55bfd5efe2bb612813") version("0.76-0", sha256="508a5ebb161519cd0fcd156dc047b51becb216d545d62c6522496463f94ec280") version("0.75-7", sha256="462900100ca598ef21dbe566bf1ab2ce7c49cdeab6b7a600a50489b05f61b61b") diff --git a/var/spack/repos/builtin/packages/r-dismo/package.py b/var/spack/repos/builtin/packages/r-dismo/package.py index 93aedbad8f..0e2778904d 100644 --- a/var/spack/repos/builtin/packages/r-dismo/package.py +++ b/var/spack/repos/builtin/packages/r-dismo/package.py @@ -17,6 +17,7 @@ class RDismo(RPackage): license("GPL-3.0-or-later") + version("1.3-14", sha256="67a0f2e95562dd2aa612d52dfffab86985b52591a5ed7891b58b26667b394cd7") version("1.3-9", sha256="3924521db67716b004a4c870985c65d037edfe926b14222740fd6c2b2093beee") version("1.3-5", sha256="812e1932d42c0f40acf2ab5c5b2d068f93128caf648626e1d11baf1a09340ee7") version("1.3-3", sha256="fd65331ac18a4287ba0856b90508ddd0e2738c653eecc5f3eb2b14e1d06949ca") diff --git a/var/spack/repos/builtin/packages/r-distributional/package.py b/var/spack/repos/builtin/packages/r-distributional/package.py index 524f21bd63..7daba35a5c 100644 --- a/var/spack/repos/builtin/packages/r-distributional/package.py +++ b/var/spack/repos/builtin/packages/r-distributional/package.py @@ -21,6 +21,7 @@ class RDistributional(RPackage): license("GPL-3.0-only") + version("0.4.0", sha256="09b5f3279bed4c79575f75d5f7f5e3e593c7838434a78c89f0b7184e8f20e602") version("0.3.2", sha256="c883d633398233aee5a8ca6b587687f765bdfe0732a84e4961e7f71ac0d008f8") version("0.3.1", sha256="727e56cbcf0c8a8adacca8030214ddbd14f68ee28d0aad716467bd68b027235f") version("0.3.0", sha256="fab36c7346617d8f2ca4b3cd0e3c9da93cb2f95fb7f102a3ae88670e694751d6") @@ -30,9 +31,10 @@ class RDistributional(RPackage): depends_on("r-rlang@0.4.5:", type=("build", "run")) depends_on("r-generics", type=("build", "run")) depends_on("r-numderiv", type=("build", "run")) - depends_on("r-ggplot2", type=("build", "run")) - depends_on("r-scales", type=("build", "run")) - depends_on("r-farver", type=("build", "run")) - depends_on("r-digest", type=("build", "run")) depends_on("r-lifecycle", type=("build", "run")) + + depends_on("r-ggplot2", type=("build", "run"), when="@:0.3.2") + depends_on("r-scales", type=("build", "run"), when="@:0.3.2") + depends_on("r-farver", type=("build", "run"), when="@:0.3.2") + depends_on("r-digest", type=("build", "run"), when="@:0.3.2") depends_on("r-ellipsis", type=("build", "run"), when="@:0.3.0") diff --git a/var/spack/repos/builtin/packages/r-diversitree/package.py b/var/spack/repos/builtin/packages/r-diversitree/package.py index 4b3d646833..9960ba3b24 100644 --- a/var/spack/repos/builtin/packages/r-diversitree/package.py +++ b/var/spack/repos/builtin/packages/r-diversitree/package.py @@ -21,6 +21,7 @@ class RDiversitree(RPackage): license("GPL-2.0-or-later") + version("0.10-0", sha256="c13627e04bc55b61de218a6bf6fa44680970604f82eed88417d1de5717d782f6") version("0.9-16", sha256="4c236970b58e56b922352f3f5d97010c74d8ec5783b375c311fe11abfb99f967") version("0.9-15", sha256="c739ef3d4fcc24fd6855b1d297d31e0f89fbaff1efe8a2d149044458ecd363ea") version("0.9-11", sha256="4caa6a468f93de9f1c8c30e4457f34bb8346e1acdaf74f684005bfa86a950ecb") diff --git a/var/spack/repos/builtin/packages/r-doby/package.py b/var/spack/repos/builtin/packages/r-doby/package.py index 8c7015b844..9f989aca41 100644 --- a/var/spack/repos/builtin/packages/r-doby/package.py +++ b/var/spack/repos/builtin/packages/r-doby/package.py @@ -16,16 +16,25 @@ class RDoby(RPackage): cran = "doBy" + version("4.6.22", sha256="2aa7e236de98af73de54a46214ceac50fdf69d90b12bb37f2779a501f40b0b0d") version("4.6.16", sha256="d5937eb57d293b0bc2e581ff2e1e628671cb4eacddc0b9574dc28a5316ecbbe7") depends_on("r@3.6.0:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@4.6.18:") + depends_on("r@4.2.0:", type=("build", "run"), when="@4.6.21:") + depends_on("r-boot", type=("build", "run"), when="@4.6.21:") depends_on("r-broom", type=("build", "run")) + depends_on("r-cowplot", type=("build", "run"), when="@4.6.21:") depends_on("r-deriv", type=("build", "run")) depends_on("r-dplyr", type=("build", "run")) depends_on("r-ggplot2", type=("build", "run")) depends_on("r-mass", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) - depends_on("r-magrittr", type=("build", "run")) depends_on("r-microbenchmark", type=("build", "run")) - depends_on("r-pbkrtest@0.4-8.1:", type=("build", "run")) + depends_on("r-modelr", type=("build", "run"), when="@4.6.21:") + depends_on("r-rlang", type=("build", "run"), when="@4.6.21:") depends_on("r-tibble", type=("build", "run")) + depends_on("r-tidyr", type=("build", "run"), when="@4.6.21:") + + depends_on("r-magrittr", type=("build", "run"), when="@:4.6.20") + depends_on("r-pbkrtest@0.4-8.1:", type=("build", "run"), when="@:4.6.21") diff --git a/var/spack/repos/builtin/packages/r-dotcall64/package.py b/var/spack/repos/builtin/packages/r-dotcall64/package.py index 5c78fcd835..7a7a3864f9 100644 --- a/var/spack/repos/builtin/packages/r-dotcall64/package.py +++ b/var/spack/repos/builtin/packages/r-dotcall64/package.py @@ -18,6 +18,7 @@ class RDotcall64(RPackage): cran = "dotCall64" + version("1.1-1", sha256="21b8d7d747c07aaf8a82d61ec98fe0539afcaa5a565d9c2fc55be65b6af2c91b") version("1.0-2", sha256="e0c7728aebbea5ebf06dfeefae4fc0a240e6dde7c2bf13f2ed041b91d337a4ac") version("1.0-1", sha256="f10b28fcffb9453b1d8888a72c8fd2112038b5ac33e02a481492c7bd249aa5c6") version("1.0-0", sha256="69318dc6b8aecc54d4f789c8105e672198363b395f1a764ebaeb54c0473d17ad") diff --git a/var/spack/repos/builtin/packages/r-downlit/package.py b/var/spack/repos/builtin/packages/r-downlit/package.py index 5a2e92028e..a6930c8861 100644 --- a/var/spack/repos/builtin/packages/r-downlit/package.py +++ b/var/spack/repos/builtin/packages/r-downlit/package.py @@ -18,9 +18,11 @@ class RDownlit(RPackage): license("MIT") + version("0.4.4", sha256="55c377dcee4adc48c1060e14079f3d1832453d066a2cf070530caa210c48f828") version("0.4.2", sha256="33dff66909104d1a5ba8e57b1288986e82b61fd5e91dce0cd358d53724b37e3c") depends_on("r@3.4.0:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@0.4.4:") depends_on("r-brio", type=("build", "run")) depends_on("r-desc", type=("build", "run")) depends_on("r-digest", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-dplyr/package.py b/var/spack/repos/builtin/packages/r-dplyr/package.py index edd2e01091..85d7aff1f7 100644 --- a/var/spack/repos/builtin/packages/r-dplyr/package.py +++ b/var/spack/repos/builtin/packages/r-dplyr/package.py @@ -16,6 +16,7 @@ class RDplyr(RPackage): license("MIT") + version("1.1.4", sha256="cf730414d5d4ab387b4e9890a4b1df9d17a3903488e8da8df1cf2e11e44558cb") version("1.1.2", sha256="c220c38a3a44977c43eeae3d9aef90e8bb297150cad0993ea8d3cc13150096e3") version("1.0.10", sha256="3ab639f627b4e439052df18f193f0ccab223225a4ae2ff8c18aba4f9807e0f2b") version("1.0.9", sha256="e2e1f7312618b4e32ada9a1da79cef32eaec12acd408c973a6b069c6be4fb46b") @@ -63,6 +64,7 @@ class RDplyr(RPackage): depends_on("r-vctrs@0.3.5:", type=("build", "run"), when="@1.0.3:") depends_on("r-vctrs@0.4.1:", type=("build", "run"), when="@1.0.9:") depends_on("r-vctrs@0.6.0:", type=("build", "run"), when="@1.1.2:") + depends_on("r-vctrs@0.6.4:", type=("build", "run"), when="@1.1.4:") depends_on("r-pillar@1.5.1:", type=("build", "run"), when="@1.0.6:") depends_on("r-pillar@1.9.0:", type=("build", "run"), when="@1.1.2:") diff --git a/var/spack/repos/builtin/packages/r-dqrng/package.py b/var/spack/repos/builtin/packages/r-dqrng/package.py index 51a7793a1b..f85215b4c7 100644 --- a/var/spack/repos/builtin/packages/r-dqrng/package.py +++ b/var/spack/repos/builtin/packages/r-dqrng/package.py @@ -26,10 +26,12 @@ class RDqrng(RPackage): license("AGPL-3.0-only OR custom") + version("0.4.1", sha256="3d9df935020c3c2538bc712456079925c4b379d67407c83fbc008340e353288f") version("0.3.0", sha256="4beeabfe245ce7196b07369f2a7d277cb08869ad8b45a22c6354c4cc70a39abb") version("0.2.1", sha256="e149c105b1db31e7f46b1aebf31d911a109e380923f3696fc56a53197fc1e866") depends_on("r@3.1.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@0.3.1:") depends_on("r-rcpp@0.12.16:", type=("build", "run")) depends_on("r-bh@1.64.0-1:", type=("build", "run")) depends_on("r-sitmo@2.0.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-dt/package.py b/var/spack/repos/builtin/packages/r-dt/package.py index 3fd34dff09..db589f3433 100644 --- a/var/spack/repos/builtin/packages/r-dt/package.py +++ b/var/spack/repos/builtin/packages/r-dt/package.py @@ -18,6 +18,7 @@ class RDt(RPackage): license("Apache-2.0") + version("0.33", sha256="e145dadb1ce3db7c837f4313a8b5615b5b8ae63063ec2df93e528529717b27b8") version("0.27", sha256="e32fdccd2be430933cff88a9ce79045bfdbe3e08e0cd8d15037445808613289a") version("0.26", sha256="c412932be126d44f415559258e1d65adc0e84c3dfb9a70ce3196a2f877f7030c") version("0.25", sha256="0dfc8713062e1fe4e0428936367f35a0a41616c27b6d9b002bdfda58091c442b") @@ -35,6 +36,7 @@ class RDt(RPackage): depends_on("r-htmltools@0.3.6:", type=("build", "run")) depends_on("r-htmlwidgets@1.3:", type=("build", "run")) + depends_on("r-httpuv", type=("build", "run"), when="@0.29:") depends_on("r-jsonlite@0.9.16:", type=("build", "run"), when="@0.8:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-crosstalk", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-e1071/package.py b/var/spack/repos/builtin/packages/r-e1071/package.py index b2e66ec2ae..dfeed53f3b 100644 --- a/var/spack/repos/builtin/packages/r-e1071/package.py +++ b/var/spack/repos/builtin/packages/r-e1071/package.py @@ -18,6 +18,7 @@ class RE1071(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.7-14", sha256="754d97ab073acc07b909a190f87f021e31e07269c8632c53166a6c2843e65195") version("1.7-13", sha256="da94e191af6e69aa0f9e3250d4b823674cc869339d914f761ebf2824177b6b2f") version("1.7-12", sha256="91e052d0a521db74a66df90adb28db601f2a2cca38b03dcad030ac2fdc5c5dcf") version("1.7-11", sha256="48c18e10e7cabc742d37b563672e2eddb6061f2378b69e5563be79ab9948d92f") diff --git a/var/spack/repos/builtin/packages/r-earth/package.py b/var/spack/repos/builtin/packages/r-earth/package.py index 92e3c072bb..3fae5b8896 100644 --- a/var/spack/repos/builtin/packages/r-earth/package.py +++ b/var/spack/repos/builtin/packages/r-earth/package.py @@ -17,6 +17,7 @@ class REarth(RPackage): license("GPL-3.0-only") + version("5.3.3", sha256="786a0fcabb3db13e0e0a4ba61ecccb7e171030b39bc97926f8e7159485d2f572") version("5.3.2", sha256="c844d75edf9a2706a911bb05ed4287aad9acf6f3fed357e037763a300eac0bea") version("5.3.1", sha256="0bbe06ba974ceb8ec5de1d59cb53f9487d1828d7130fe2503c48b6cb449c4b03") version("5.3.0", sha256="05ace806271a74b3ddf8718a93237fe2a8550a8659ebd87f8079c0bda5e02437") @@ -26,4 +27,6 @@ class REarth(RPackage): depends_on("r-formula@1.2-3:", type=("build", "run")) depends_on("r-plotmo@3.5.4:", type=("build", "run")) depends_on("r-plotmo@3.6.0:", type=("build", "run"), when="@5.3.0") - depends_on("r-teachingdemos@2.10:", type=("build", "run")) + depends_on("r-plotmo@3.6.0:", type=("build", "run"), when="@5.3.3:") + + depends_on("r-teachingdemos@2.10:", type=("build", "run"), when="@:5.3.2") diff --git a/var/spack/repos/builtin/packages/r-ecosolver/package.py b/var/spack/repos/builtin/packages/r-ecosolver/package.py index d61d3979d1..bb57f5be6a 100644 --- a/var/spack/repos/builtin/packages/r-ecosolver/package.py +++ b/var/spack/repos/builtin/packages/r-ecosolver/package.py @@ -17,6 +17,7 @@ class REcosolver(RPackage): cran = "ECOSolveR" + version("0.5.5", sha256="2594ed1602b2fe159cc9aff3475e9cba7c1927b496c3daeabc1c0d227943ecc7") version("0.5.4", sha256="5d7489e8176c1df3f3f1290732243429280efca4f837916e6b6faa6dc8a8e324") depends_on("gmake", type="build") diff --git a/var/spack/repos/builtin/packages/r-ecp/package.py b/var/spack/repos/builtin/packages/r-ecp/package.py index ed1b534181..7aec827a94 100644 --- a/var/spack/repos/builtin/packages/r-ecp/package.py +++ b/var/spack/repos/builtin/packages/r-ecp/package.py @@ -21,6 +21,7 @@ class REcp(RPackage): license("GPL-2.0-or-later") + version("3.1.5", sha256="9e2389632447a80a5e9937f15a98c092c33f5460e6ceb904971fcff3eda8a29e") version("3.1.4", sha256="1b98bf25a7659517dc98d1b950fe2a5fed9ef8f750893b3a9e06e9c6d59cc04d") version("3.1.3", sha256="a80ab10bafe30cc96287b9220e44c4b4eda40f5dd0546e4d2a2e1baab514c058") version("3.1.1", sha256="d2ab194e22e6ab0168222fbccfcf2e25c6cd51a73edc959086b0c6e0a7410268") diff --git a/var/spack/repos/builtin/packages/r-ellipse/package.py b/var/spack/repos/builtin/packages/r-ellipse/package.py index 7c791bf1b5..e798ce3b2b 100644 --- a/var/spack/repos/builtin/packages/r-ellipse/package.py +++ b/var/spack/repos/builtin/packages/r-ellipse/package.py @@ -20,6 +20,7 @@ class REllipse(RPackage): license("GPL-2.0-or-later") + version("0.5.0", sha256="cde8553973ce2cc04324318b3df13890d585987171fedfe2efbf1430f82cc2f3") version("0.4.5", sha256="39c475851380deeb9361464f8f32fa2ee250f24604791c00680a54aaaaba8936") version("0.4.3", sha256="02ef2b11c3462a8b800332e522183f4c7c40c7d2d66c5174d5f3f6d8cc68a946") version("0.4.2", sha256="1719ce9a00b9ac4d56dbf961803085b892d3359726fda3567bb989ddfed9a5f2") diff --git a/var/spack/repos/builtin/packages/r-emmeans/package.py b/var/spack/repos/builtin/packages/r-emmeans/package.py index bf2a67120a..150e26a649 100644 --- a/var/spack/repos/builtin/packages/r-emmeans/package.py +++ b/var/spack/repos/builtin/packages/r-emmeans/package.py @@ -21,6 +21,7 @@ class REmmeans(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.10.4", sha256="66653623c5984f99ba481a8611d6cf3b829e577f07bbe4043f279a3f8fbadcc3") version("1.8.5", sha256="5c88b415b5a42d8c1aa63af090c4987326530ea6d0e60bab9b5fb7e99a982415") version("1.8.2", sha256="785973457d8a6547df489f87b62987d44a68c4b9018661d38ca11ee34e49d209") version("1.8.1-1", sha256="79fc5e44255427b038d0dbe2c9887d84984baacb11bb9a9078cd8d0dca2e6577") diff --git a/var/spack/repos/builtin/packages/r-envstats/package.py b/var/spack/repos/builtin/packages/r-envstats/package.py index 6a03accb0d..58fae609b7 100644 --- a/var/spack/repos/builtin/packages/r-envstats/package.py +++ b/var/spack/repos/builtin/packages/r-envstats/package.py @@ -23,6 +23,7 @@ class REnvstats(RPackage): cran = "EnvStats" + version("2.8.1", sha256="12952b9eaa64b7bdbaaa5c6b7acb3aa1028ddfa4e5de7ddfea54f900c452d6a6") version("2.7.0", sha256="09a6f0d5b60856c7298371e4a8a085a1db7abf0e71ccb9a2dc9ca24248fb5d81") version("2.5.0", sha256="4f77aa66c9dbbe411370a6dd5b9e514823d5506bbcdad9dc09a9e4268d65a7f7") version("2.4.0", sha256="49459e76412037b3d8021bd83ee93d140bc3e715a2a2282a347ef60061900514") diff --git a/var/spack/repos/builtin/packages/r-ergm/package.py b/var/spack/repos/builtin/packages/r-ergm/package.py index b5434cfa37..f30fe86777 100644 --- a/var/spack/repos/builtin/packages/r-ergm/package.py +++ b/var/spack/repos/builtin/packages/r-ergm/package.py @@ -19,6 +19,7 @@ class RErgm(RPackage): license("GPL-3.0-only") + version("4.6.0", sha256="b471a60c39eb5b478e06dd0caf1d085f4b0927f1c260de699f1c8d4fe831a7f7") version("4.4.0", sha256="2db152cc7fdd71d6f0065603405f30bf5e206591da39b8f542178ec6d6126173") version("4.3.1", sha256="3ff63c81ea4061ac0c79247fcd2e614494624f7f1df57a4634927e7e90800ed3") version("4.2.3", sha256="35d15373d4a8445872eb3713c81c6c6ac34b72096e0cdb04292a468e65ae9288") @@ -44,7 +45,7 @@ class RErgm(RPackage): depends_on("r-trust@0.1.7:", type=("build", "run")) depends_on("r-trust@0.1.8:", type=("build", "run"), when="@4.1.2:") depends_on("r-matrix@1.2-17:", type=("build", "run")) - depends_on("r-matrix@1.3.2:", type=("build", "run"), when="@4.1.2:") + depends_on("r-matrix@1.3-2:", type=("build", "run"), when="@4.1.2:") depends_on("r-lpsolveapi@5.5.2.0.17.7:", type=("build", "run"), when="@4.1.2:") depends_on("r-mass@7.3-51.4:", type=("build", "run")) depends_on("r-mass@7.3.53.1:", type=("build", "run"), when="@4.1.2:") @@ -54,6 +55,7 @@ class RErgm(RPackage): depends_on("r-statnet-common@4.6.0:", type=("build", "run"), when="@4.2.1:") depends_on("r-statnet-common@4.7.0:", type=("build", "run"), when="@4.3.1:") depends_on("r-statnet-common@4.8.0:", type=("build", "run"), when="@4.4.0:") + depends_on("r-statnet-common@4.9.0:", type=("build", "run"), when="@4.5.0:") depends_on("r-rle", type=("build", "run"), when="@3.11.0:") depends_on("r-rle@0.9.2:", type=("build", "run"), when="@4.1.2:") depends_on("r-purrr@0.3.2:", type=("build", "run"), when="@3.10.0:") diff --git a/var/spack/repos/builtin/packages/r-estimability/package.py b/var/spack/repos/builtin/packages/r-estimability/package.py index 545001ea96..9a246b6ec6 100644 --- a/var/spack/repos/builtin/packages/r-estimability/package.py +++ b/var/spack/repos/builtin/packages/r-estimability/package.py @@ -19,5 +19,9 @@ class REstimability(RPackage): license("GPL-3.0-or-later") + version("1.5.1", sha256="3ca6b96a39fd8877e8636f94d20f34308b7296c1376c646703d27df8591644e9") version("1.4.1", sha256="c65aaf1e452f3947013d3ce05ae674d48492081f615a942592dc91db780f1124") version("1.3", sha256="a33179c5fbd6a1a623d90cb6f1743148f92c09429fac466867f3ea70946a2e32") + + depends_on("r@4.1.0:", when="@1.5.1:", type=("build", "run")) + depends_on("r@4.3.0:", when="@1.5:1.5.0", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-europepmc/package.py b/var/spack/repos/builtin/packages/r-europepmc/package.py index 64a9c09462..082450f3c9 100644 --- a/var/spack/repos/builtin/packages/r-europepmc/package.py +++ b/var/spack/repos/builtin/packages/r-europepmc/package.py @@ -25,6 +25,7 @@ class REuropepmc(RPackage): license("GPL-3.0-only") + version("0.4.3", sha256="25945534527bd89a6dcd9e371e3c2a68f3fe2046587daf1563be16eac9dd1998") version("0.4.1", sha256="c1ba91a2a99432cabe18e86fea33ac9d20dbb3ac0b58f430d464b4d8ecba4a9a") version("0.4", sha256="d55f62963d0ee84830654bbc78f4ad8285e376b04be137cbeaf8ad2a98b7969c") version("0.3", sha256="5044a253d223e2bb8502063cd03c0fe4db856467e497d650da7ccd8f75d0f8d9") diff --git a/var/spack/repos/builtin/packages/r-evaluate/package.py b/var/spack/repos/builtin/packages/r-evaluate/package.py index 86aeb872a9..bb16d16b85 100644 --- a/var/spack/repos/builtin/packages/r-evaluate/package.py +++ b/var/spack/repos/builtin/packages/r-evaluate/package.py @@ -16,6 +16,7 @@ class REvaluate(RPackage): license("MIT") + version("0.24.0", sha256="e23d764a58e7525257d57da4ccfee9d6f63b5b3c18bf01c76818ec8c9c587fd6") version("0.20", sha256="35f5d9e85603600b58960923d591c5ca1115153febba7c612867d8b5598afff0") version("0.18", sha256="7f4eecdc97ac286d5c7a39c454fe6798da38ef634bf9305c595faa8facb2bf36") version("0.17", sha256="49c743c94cb967911af0e5555861a3762cd840b98578882671b583cff86ba963") @@ -26,5 +27,6 @@ class REvaluate(RPackage): version("0.9", sha256="e8118c9d6ec479c0e712913848404431b6b6c0282f3c131acaf9a677ab5fc6ae") depends_on("r@3.0.2:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@0.24.0:") depends_on("r-stringr@0.6.2:", type=("build", "run"), when="@:0.11") diff --git a/var/spack/repos/builtin/packages/r-evd/package.py b/var/spack/repos/builtin/packages/r-evd/package.py index 09a3a10356..5737dac4e0 100644 --- a/var/spack/repos/builtin/packages/r-evd/package.py +++ b/var/spack/repos/builtin/packages/r-evd/package.py @@ -19,6 +19,7 @@ class REvd(RPackage): license("GPL-3.0-only") + version("2.3-7", sha256="4a899df15d39be4a8d544de4f5e4690b4673790a46da6a6c9c2a70fef3b55648") version("2.3-6.1", sha256="662c592d3f5c5693dbf1c673d1137c4a60a347e330b71be1f3933f201d2c8971") version("2.3-6", sha256="8edb8bc4f06d246c4343fd923bb5d5df99724d6db8821bfd996220343a834cb6") version("2.3-3", sha256="2fc5ef2e0c3a2a9392425ddd45914445497433d90fb80b8c363877baee4559b4") diff --git a/var/spack/repos/builtin/packages/r-exactextractr/package.py b/var/spack/repos/builtin/packages/r-exactextractr/package.py index 28eb6fe05f..a9a6e5b058 100644 --- a/var/spack/repos/builtin/packages/r-exactextractr/package.py +++ b/var/spack/repos/builtin/packages/r-exactextractr/package.py @@ -16,6 +16,7 @@ class RExactextractr(RPackage): license("Apache-2.0") + version("0.10.0", sha256="9b7fc3c6f0e9e89596a1992240ecbb8e2893f4addffaecbd852403c10a0943de") version("0.9.1", sha256="f0cf367c25a45b09eda1d435c8c818590ff4de86162f675e3172821d1853f4a1") version("0.9.0", sha256="705a355534f427dc832af2a294aaf928c10c72d6335d38aed86da64d814eb18d") version("0.8.2", sha256="cc32ab3af8d881a7e7836c296ea42f3fdabf3373ec1de0b154dbfe9870ee8a74") diff --git a/var/spack/repos/builtin/packages/r-expm/package.py b/var/spack/repos/builtin/packages/r-expm/package.py index 944d12211f..c1ece1ae78 100644 --- a/var/spack/repos/builtin/packages/r-expm/package.py +++ b/var/spack/repos/builtin/packages/r-expm/package.py @@ -16,6 +16,7 @@ class RExpm(RPackage): license("GPL-2.0-or-later") + version("1.0-0", sha256="02c536f8f6af55b132210a50b1e9694a3549806bf97c49e0fe03595945aab254") version("0.999-7", sha256="28f249b914b8dd33eee16663fc793e57afd0e301e16067bf9f27fa8e591ba0f1") version("0.999-6", sha256="2c79912fd2e03fcf89c29f09555880934402fcb2359af8b4579d79b4f955addc") version("0.999-4", sha256="58d06427a08c9442462b00a5531e2575800be13ed450c5a1546261251e536096") diff --git a/var/spack/repos/builtin/packages/r-factominer/package.py b/var/spack/repos/builtin/packages/r-factominer/package.py index 39b8379a45..d1dab128f0 100644 --- a/var/spack/repos/builtin/packages/r-factominer/package.py +++ b/var/spack/repos/builtin/packages/r-factominer/package.py @@ -20,6 +20,7 @@ class RFactominer(RPackage): cran = "FactoMineR" + version("2.11", sha256="32c26b42cb4dd8d7a8c845f1e8562fa0e3ebded19d3c1284c3504df09974f063") version("2.8", sha256="c09086f7ae4c4855ed6f1e8303b497e250ab6cf101feb3db6c8a93510e5ff851") version("2.6", sha256="81261608c097b863e004a0c6cdc4bdfd6e7bf49c6ec20e211233eda2e5268f75") version("2.4", sha256="b9e3adce9a66b4daccc85fa67cb0769d6be230beeb126921b386ccde5db2e851") diff --git a/var/spack/repos/builtin/packages/r-fansi/package.py b/var/spack/repos/builtin/packages/r-fansi/package.py index 11d4708e17..74f31d835c 100644 --- a/var/spack/repos/builtin/packages/r-fansi/package.py +++ b/var/spack/repos/builtin/packages/r-fansi/package.py @@ -16,6 +16,7 @@ class RFansi(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.0.6", sha256="ea9dc690dfe50a7fad7c5eb863c157d70385512173574c56f4253b6dfe431863") version("1.0.4", sha256="3163214e6c40922bbb495229259ed8ce1bebd98b77098a6936d234e43da9c49f") version("1.0.3", sha256="86a7b83d8c9d28baebbde310cd0b459d0950a9c7ff1a6276ce5858f6a89bc06a") version("1.0.2", sha256="d1e2cf2e10613abe19071e3dab7c564ebcf85ad13cbee25fa1999267af01b557") diff --git a/var/spack/repos/builtin/packages/r-farver/package.py b/var/spack/repos/builtin/packages/r-farver/package.py index e7d36ca104..980cb7118e 100644 --- a/var/spack/repos/builtin/packages/r-farver/package.py +++ b/var/spack/repos/builtin/packages/r-farver/package.py @@ -21,6 +21,7 @@ class RFarver(RPackage): license("MIT") + version("2.1.2", sha256="528823b95daab4566137711f1c842027a952bea1b2ae6ff098e2ca512b17fe25") version("2.1.1", sha256="0dcfda6ca743f465372790bcff1bcbc6a7145fdac1c682b021f654e8c6c996ce") version("2.1.0", sha256="e5c8630607049f682fb3002b99ca4f5e7c6b94f8b2a4342df594e7853b77cef4") version("2.0.3", sha256="0e1590df79ec6078f10426411b96216b70568a4eaf3ffd84ca723add0ed8e5cc") diff --git a/var/spack/repos/builtin/packages/r-fastcluster/package.py b/var/spack/repos/builtin/packages/r-fastcluster/package.py index bdc1f96110..685ab3f399 100644 --- a/var/spack/repos/builtin/packages/r-fastcluster/package.py +++ b/var/spack/repos/builtin/packages/r-fastcluster/package.py @@ -24,6 +24,7 @@ class RFastcluster(RPackage): license("BSD-2-Clause OR GPL-2.0-only OR custom") + version("1.2.6", sha256="852a05458fb0b64497e9cf8f0182b599d1c2b1e9af03ec45f7c0c9280c1f8d19") version("1.2.3", sha256="1f229129e1cddc78c7bb5ecc90c4d28ed810ee68cf210004c7cdfa12cfaf2a01") version("1.1.25", sha256="f3661def975802f3dd3cec5b2a1379f3707eacff945cf448e33aec0da1ed4205") diff --git a/var/spack/repos/builtin/packages/r-fastdigest/package.py b/var/spack/repos/builtin/packages/r-fastdigest/package.py index aa1aea7988..b6fe0390d7 100644 --- a/var/spack/repos/builtin/packages/r-fastdigest/package.py +++ b/var/spack/repos/builtin/packages/r-fastdigest/package.py @@ -23,4 +23,5 @@ class RFastdigest(RPackage): license("Artistic-2.0") + version("0.6-4", sha256="b2b6a550d90446bed911c9ad7642efd2a869257ecc5b9eb57e66b2cd4ef109a0") version("0.6-3", sha256="62a04aa39f751cf9bb7ff43cadb3c1a8d2270d7f3e8550a2d6ca9e1d8ca09a09") diff --git a/var/spack/repos/builtin/packages/r-fastdummies/package.py b/var/spack/repos/builtin/packages/r-fastdummies/package.py new file mode 100644 index 0000000000..44ff1bb998 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-fastdummies/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RFastdummies(RPackage): + """Fast Creation of Dummy (Binary) Columns and Rows from Categorical + Variables.""" + + homepage = "https://jacobkap.github.io/fastDummies/" + cran = "fastDummies" + + license("MIT", checked_by="wdconinc") + + version("1.7.4", sha256="95904d4b67efc3faafa47cae9473c9d75653bc3fb6ad0083869ebf9f7960dd08") + + depends_on("r@2.1:", type=("build", "run")) + depends_on("r@2.10:", type=("build", "run"), when="@1.0.0:") + depends_on("r-data-table", type=("build", "run")) + depends_on("r-tibble", type=("build", "run")) + depends_on("r-stringr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-fastica/package.py b/var/spack/repos/builtin/packages/r-fastica/package.py index 9c64c3130c..a22516c3b1 100644 --- a/var/spack/repos/builtin/packages/r-fastica/package.py +++ b/var/spack/repos/builtin/packages/r-fastica/package.py @@ -14,6 +14,7 @@ class RFastica(RPackage): cran = "fastICA" + version("1.2-5.1", sha256="65916ee9a44598a5d50c43d96de5fb11730e0a5a5938e5859f1a928d31f3d985") version("1.2-3", sha256="e9ef82644cb64bb49ae3b7b6e0885f4fb2dc08ae030f8c76fe8dd8507b658950") version("1.2-2", sha256="32223593374102bf54c8fdca7b57231e4f4d0dd0be02d9f3500ad41b1996f1fe") diff --git a/var/spack/repos/builtin/packages/r-fastmap/package.py b/var/spack/repos/builtin/packages/r-fastmap/package.py index a97657a321..3d50ab69ba 100644 --- a/var/spack/repos/builtin/packages/r-fastmap/package.py +++ b/var/spack/repos/builtin/packages/r-fastmap/package.py @@ -20,6 +20,7 @@ class RFastmap(RPackage): license("MIT") + version("1.2.0", sha256="b1da04a2915d1d057f3c2525e295ef15016a64e6667eac83a14641bbd83b9246") version("1.1.1", sha256="3623809dd016ae8abd235200ba7834effc4b916915a059deb76044137c5c7173") version("1.1.0", sha256="9113e526b4c096302cfeae660a06de2c4c82ae4e2d3d6ef53af6de812d4c822b") version("1.0.1", sha256="4778b05dfebd356f8df980dfeff3b973a72bca14898f870e5c40c1d84db9faec") diff --git a/var/spack/repos/builtin/packages/r-fastmatch/package.py b/var/spack/repos/builtin/packages/r-fastmatch/package.py index e95677e309..3d5773182b 100644 --- a/var/spack/repos/builtin/packages/r-fastmatch/package.py +++ b/var/spack/repos/builtin/packages/r-fastmatch/package.py @@ -18,6 +18,7 @@ class RFastmatch(RPackage): license("GPL-2.0-only") + version("1.1-4", sha256="9a914cac9c1ea2984bd44eebe421e1636504907a8064ae26347fe3ec2b9bd56b") version("1.1-3", sha256="1defa0b08bc3f48e4c3e4ba8df4f1b9e8299932fd8c747c67d32de44f90b9861") version("1.1-0", sha256="20b51aa4838dbe829e11e951444a9c77257dcaf85130807508f6d7e76797007d") diff --git a/var/spack/repos/builtin/packages/r-fastmatrix/package.py b/var/spack/repos/builtin/packages/r-fastmatrix/package.py index c086bcc21e..27102cdc09 100644 --- a/var/spack/repos/builtin/packages/r-fastmatrix/package.py +++ b/var/spack/repos/builtin/packages/r-fastmatrix/package.py @@ -30,6 +30,7 @@ class RFastmatrix(RPackage): license("GPL-3.0-only") + version("0.5-772", sha256="72601bae9a59f467c5da9ccf08788f0233cdbb2420b6b2aa43a42a2632ff9c55") version("0.5", sha256="fb5f251a98425161e9dbbbb7edf95226725255b1474aad03ab046c7c6c6c3f12") version("0.4-1245", sha256="ee2e12b5dcda4585cca21f2c0ac144706f6fd26024586e91d622c6cd66d1d873") version("0.4-1", sha256="494a1aad38dcec28956eba8d095c964b20c5388dfb6dc2a23848ae37ea61cde5") diff --git a/var/spack/repos/builtin/packages/r-fda/package.py b/var/spack/repos/builtin/packages/r-fda/package.py index 0f5aa30a7f..93a4d3a3d0 100644 --- a/var/spack/repos/builtin/packages/r-fda/package.py +++ b/var/spack/repos/builtin/packages/r-fda/package.py @@ -19,6 +19,7 @@ class RFda(RPackage): license("GPL-2.0-or-later") + version("6.1.8", sha256="ef8d858a2879491aa2c441d171ba14462bf27852d16e8420fa49aab83f42c407") version("6.0.5", sha256="14445776fc65284cd6cae98e5b4dd14c2626d96db5f78c0fcc6aabce5419b8f1") version("6.0.3", sha256="205814b9812664e8201221f99e0e8391aa49dba2ae287dc404c57c0c492477d3") version("5.5.1", sha256="dcaa2f6ae226d35855bc79c6967f60d45404b984c0afaec215b139c4b8dea23a") diff --git a/var/spack/repos/builtin/packages/r-ff/package.py b/var/spack/repos/builtin/packages/r-ff/package.py index 04017a2835..ad2bec4723 100644 --- a/var/spack/repos/builtin/packages/r-ff/package.py +++ b/var/spack/repos/builtin/packages/r-ff/package.py @@ -56,6 +56,7 @@ class RFf(RPackage): license("GPL-2.0-only OR GPL-3.0-only OR custom") + version("4.0.12", sha256="08af355a9a10fe29d48d085abc7cf1f975e1a4a670668a4f8d9632d087fb41bf") version("4.0.9", sha256="722053271987a0c9673c3ff9e7968bbab47979d529a2fe6bb1a3179408ee3c4f") version("4.0.7", sha256="0a47333d31c7afc3f95387166e21a3e4c763cbef47d9b5927753aef4ff8d83fa") version("4.0.5", sha256="9aba9e271144ec224063ddba0d791e2fcdb9c912d48fdc49e204fce628355037") diff --git a/var/spack/repos/builtin/packages/r-fields/package.py b/var/spack/repos/builtin/packages/r-fields/package.py index 27cb884cc0..9cb19fc614 100644 --- a/var/spack/repos/builtin/packages/r-fields/package.py +++ b/var/spack/repos/builtin/packages/r-fields/package.py @@ -38,6 +38,7 @@ class RFields(RPackage): license("GPL-2.0-or-later") + version("16.2", sha256="3910950cd5476e7e3d17d00dabfa37a6491019426c74b6955a2fbe5648a3b3e4") version("14.1", sha256="57c4c5592443d2ee869014b3199989b5edd1aff52e24f1cd313b8f9b34a95434") version("13.3", sha256="c652838b1ae7eb368831522824bfbc1d1db7b9d1db5e9bb52b194098549944c3") version("11.6", sha256="8600d1d992c40668cc2ab01b3c17d0e1bd44a001ec7ba9f468bc0e9ef87c59db") @@ -46,5 +47,6 @@ class RFields(RPackage): depends_on("r@3.0:", type=("build", "run")) depends_on("r@3.5.0:", type=("build", "run"), when="@14.1:") depends_on("r-spam", type=("build", "run")) - depends_on("r-viridis", type=("build", "run"), when="@13.3:") + depends_on("r-viridis", type=("build", "run"), when="@13.3:14.2") + depends_on("r-viridislite", type=("build", "run"), when="@14.3:") depends_on("r-maps", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-filehash/package.py b/var/spack/repos/builtin/packages/r-filehash/package.py index 3c931a8239..a4cc9c8297 100644 --- a/var/spack/repos/builtin/packages/r-filehash/package.py +++ b/var/spack/repos/builtin/packages/r-filehash/package.py @@ -23,6 +23,7 @@ class RFilehash(RPackage): license("GPL-2.0-or-later") + version("2.4-6", sha256="558b446ba354c6fa88f694e8d6d068f999d1e7b626164eb2aeacccbb0dee81b1") version("2.4-5", sha256="3b1ee2794dd61e525ee44db16611c65957691d77bb26ae481eba988bb55da22c") version("2.4-3", sha256="f394e2c93233e8ad1c104562ea9349855dc8e303131f559cd59834f9aa3e41bd") version("2.4-2", sha256="b6d056f75d45e315943a4618f5f62802612cd8931ba3f9f474b595140a3cfb93") diff --git a/var/spack/repos/builtin/packages/r-filelock/package.py b/var/spack/repos/builtin/packages/r-filelock/package.py index 3aba76da08..18bd42a6d4 100644 --- a/var/spack/repos/builtin/packages/r-filelock/package.py +++ b/var/spack/repos/builtin/packages/r-filelock/package.py @@ -16,8 +16,7 @@ class RFilelock(RPackage): license("MIT") + version("1.0.3", sha256="2dcd0ec453f5ec4d96f69b0c472569d57d3c5f9956a82a48492ee02f12071137") version("1.0.2", sha256="ac2915950789b16c43a625a2b8dab6ba423588db4a7d0daa75b74518b82b1403") - depends_on("r-callr@2.0.0:", type=("build", "run")) - depends_on("r-covr", type=("build", "run")) - depends_on("r-testthat", type=("build", "run")) + depends_on("r@3.4:", type=("build", "run"), when="@1.0.3:") diff --git a/var/spack/repos/builtin/packages/r-fitdistrplus/package.py b/var/spack/repos/builtin/packages/r-fitdistrplus/package.py index 5602ed82aa..9dcf4e3b4c 100644 --- a/var/spack/repos/builtin/packages/r-fitdistrplus/package.py +++ b/var/spack/repos/builtin/packages/r-fitdistrplus/package.py @@ -24,6 +24,7 @@ class RFitdistrplus(RPackage): license("GPL-2.0-or-later") + version("1.2-1", sha256="68b4215a9dfff65880a3ba6f7febe4929b197611344932b79af05d91dc584558") version("1.1-11", sha256="26274f2b710b2417a8bca314d400abf320d4ccf0387ad082743056699501b53d") version("1.1-8", sha256="f3c72310f40773b3839a9506c3cb781d044e09b94f2f38d332bb24e5f9960f5a") version("1.1-6", sha256="17c2990041a3bb7479f3c3a6d13d96c989db8eaddab17eff7e1fbe172a5b96be") @@ -34,5 +35,6 @@ class RFitdistrplus(RPackage): depends_on("r@3.5.0:", type=("build", "run"), when="@1.1-6:") depends_on("r-mass", type=("build", "run")) depends_on("r-survival", type=("build", "run")) + depends_on("r-rlang", type=("build", "run"), when="@1.2-1:") depends_on("r-npsurv", type=("build", "run"), when="@:1.0-14") diff --git a/var/spack/repos/builtin/packages/r-flexclust/package.py b/var/spack/repos/builtin/packages/r-flexclust/package.py index bbc9fff700..5566dbaf22 100644 --- a/var/spack/repos/builtin/packages/r-flexclust/package.py +++ b/var/spack/repos/builtin/packages/r-flexclust/package.py @@ -21,6 +21,7 @@ class RFlexclust(RPackage): license("GPL-2.0-only") + version("1.4-2", sha256="0c4720d691e36091cedafa26ee1f0ddc7af931168096df00b9bf6d64fdd35a55") version("1.4-1", sha256="d67977df059e622832358069509f8968d506074320a45d34bfd21c65f898538d") version("1.4-0", sha256="82fe445075a795c724644864c7ee803c5dd332a89ea9e6ccf7cd1ae2d1ecfc74") version("1.3-5", sha256="dbf49969c93a7b314d9dc3299a0764ed9a804ba7dcbdc08a1235f244f4b85059") diff --git a/var/spack/repos/builtin/packages/r-fnn/package.py b/var/spack/repos/builtin/packages/r-fnn/package.py index c9e235eb4d..96565f2e33 100644 --- a/var/spack/repos/builtin/packages/r-fnn/package.py +++ b/var/spack/repos/builtin/packages/r-fnn/package.py @@ -15,6 +15,7 @@ class RFnn(RPackage): cran = "FNN" + version("1.1.4", sha256="db4db5a348c6051fe547193c282b6e5cc839f68f51e0afccf4939f35e9a2fc27") version("1.1.3.2", sha256="d701a13487979ebb07a071f4cc83fcf4daea5832d1f3923bce1e0d671dfe0e87") version("1.1.3.1", sha256="52b0e20611481a95bced40be4126f44b002fd3a9c4c9674bb34db4e1e3b5be5a") version("1.1.3", sha256="de763a25c9cfbd19d144586b9ed158135ec49cf7b812938954be54eb2dc59432") @@ -26,3 +27,4 @@ class RFnn(RPackage): version("0.6-2", sha256="f1fc410c341175bdb11a75b063c8c987e15b632378b56148d3566b91fca53a31") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@1.1.4:") diff --git a/var/spack/repos/builtin/packages/r-fontawesome/package.py b/var/spack/repos/builtin/packages/r-fontawesome/package.py index 90a63abb63..8709192c26 100644 --- a/var/spack/repos/builtin/packages/r-fontawesome/package.py +++ b/var/spack/repos/builtin/packages/r-fontawesome/package.py @@ -19,6 +19,7 @@ class RFontawesome(RPackage): license("MIT") + version("0.5.2", sha256="da3de2a9717084d1400d48edd783f06c66b8c910ce9c8d753d1b7d99be1c5cc9") version("0.5.1", sha256="f4ebbbe2ee8d2e2c0342b72095cfe668bd9800ea6c4bf7180300544bde7e566c") version("0.4.0", sha256="760a0bc5b50ddbce1160b123f3b3d76342167519d75641dc2c5b952fa8d4242f") version("0.3.0", sha256="4deefcf4d4580d84213f863351c2a23c39adbd2f8762d7477ec2faa8235a1a31") diff --git a/var/spack/repos/builtin/packages/r-forecast/package.py b/var/spack/repos/builtin/packages/r-forecast/package.py index 713c688d18..0a50289880 100644 --- a/var/spack/repos/builtin/packages/r-forecast/package.py +++ b/var/spack/repos/builtin/packages/r-forecast/package.py @@ -17,6 +17,7 @@ class RForecast(RPackage): license("GPL-3.0-only") + version("8.23.0", sha256="ffc3d41138f498fb286f0ebfeb72d15f9f7a8e953abf3c351ebf95fc188a1880") version("8.21", sha256="fdd131795a9d3fb399d76a9aa66a0c276637caaa9ec0c75fbe386189d005c6c2") version("8.18", sha256="5920baa8d9d81988000d0e2edcea61c05126b5cb923cb5921a6fcd7bc312d8dd") version("8.16", sha256="9f01eb895a883a7e1e23725b167b46edc1b0b152fd4120278aaa5f7b2621767f") @@ -39,5 +40,6 @@ class RForecast(RPackage): depends_on("r-timedate", type=("build", "run")) depends_on("r-tseries", type=("build", "run")) depends_on("r-urca", type=("build", "run"), when="@8.6:") + depends_on("r-withr", type=("build", "run"), when="@8.23.0:") depends_on("r-zoo", type=("build", "run")) depends_on("r-rcpparmadillo@0.2.35:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-foreign/package.py b/var/spack/repos/builtin/packages/r-foreign/package.py index 18e6d6ac46..65ef468cb2 100644 --- a/var/spack/repos/builtin/packages/r-foreign/package.py +++ b/var/spack/repos/builtin/packages/r-foreign/package.py @@ -18,6 +18,7 @@ class RForeign(RPackage): license("GPL-2.0-or-later") + version("0.8-87", sha256="1a24acf4c8e87acc740599e950388b88e5beab7e54f699a015366fbd86db2856") version("0.8-84", sha256="17edf302c7568a122dc496a61a4a886ef7c02224a235d945b473611c79c98549") version("0.8-83", sha256="87eae73f780b6bbcf0a45b3e21d1c87be0404aa2d5b455df92ab45516030721b") version("0.8-82", sha256="f8ed0684d59bec7f3a39cde1aa5ec7b3e6e36aaecacb28120c9c54f7b13f80fb") diff --git a/var/spack/repos/builtin/packages/r-fpc/package.py b/var/spack/repos/builtin/packages/r-fpc/package.py index 7b29d95d0f..9ef1e36324 100644 --- a/var/spack/repos/builtin/packages/r-fpc/package.py +++ b/var/spack/repos/builtin/packages/r-fpc/package.py @@ -30,6 +30,7 @@ class RFpc(RPackage): license("GPL-2.0-or-later") + version("2.2-12", sha256="555996b4c7e78a28067df25ac657b5065ec79b6b2cd76080382c2d5b43104787") version("2.2-10", sha256="99b4548f2eca1a092a31bc2fa4e4bd1d6b50fdfacf3218588c879ceec99147d2") version("2.2-9", sha256="29b0006e96c8645645d215d3378551bd6525aaf45abde2d9f12933cf6e75fa38") version("2.2-3", sha256="8100a74e6ff96b1cd65fd22494f2d200e54ea5ea533cfca321fa494914bdc3b7") diff --git a/var/spack/repos/builtin/packages/r-fracdiff/package.py b/var/spack/repos/builtin/packages/r-fracdiff/package.py index ac7209584b..fe3009ec5e 100644 --- a/var/spack/repos/builtin/packages/r-fracdiff/package.py +++ b/var/spack/repos/builtin/packages/r-fracdiff/package.py @@ -18,6 +18,7 @@ class RFracdiff(RPackage): license("GPL-2.0-or-later") + version("1.5-3", sha256="0f90946b4092feff93fad094a2c91bb47c8051595210e86c029c70238dbf7fc0") version("1.5-2", sha256="ac5f881330287f5bc68b5cdce4fb74156a95356ffb875ee171538bc44200f437") version("1.5-1", sha256="b8103b32a4ca3a59dda1624c07da08ecd144c7a91a747d1f4663e99421950eb6") version("1.4-2", sha256="983781cedc2b4e3ba9fa020213957d5133ae9cd6710bc61d6225728e2f6e850e") diff --git a/var/spack/repos/builtin/packages/r-fs/package.py b/var/spack/repos/builtin/packages/r-fs/package.py index 01da707587..03481f2bd0 100644 --- a/var/spack/repos/builtin/packages/r-fs/package.py +++ b/var/spack/repos/builtin/packages/r-fs/package.py @@ -16,6 +16,7 @@ class RFs(RPackage): license("MIT") + version("1.6.4", sha256="7e06290f2dbe36f54fdf51b748a4b00b8b0f68967b5754e37e0c83df7fea5ac8") version("1.6.2", sha256="548b7c0ed5ab26dc4fbd88707ae12987bcaef834dbc6de4e17d453846dc436b2") version("1.5.2", sha256="35cad1781d6d17c1feb56adc4607079c6844b63794d0ce1e74bb18dbc11e1987") version("1.5.0", sha256="36df1653571de3c628a4f769c4627f6ac53d0f9e4106d9d476afb22ae9603897") @@ -23,6 +24,7 @@ class RFs(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@1.6.2:") + depends_on("r@3.6:", type=("build", "run"), when="@1.6.4:") depends_on("gmake", type="build") depends_on("r-rcpp", type=("build", "run"), when="@:1.3.1") diff --git a/var/spack/repos/builtin/packages/r-future-apply/package.py b/var/spack/repos/builtin/packages/r-future-apply/package.py index 43d35b3845..7854e9a90c 100644 --- a/var/spack/repos/builtin/packages/r-future-apply/package.py +++ b/var/spack/repos/builtin/packages/r-future-apply/package.py @@ -19,6 +19,7 @@ class RFutureApply(RPackage): cran = "future.apply" + version("1.11.2", sha256="f4a635b0fa5e0d826d2f8da6bc1fa5bb055e640c29a85c644931d08ab2d81387") version("1.10.0", sha256="dee92dd84812fe8c55064c0f0e6d806c0c29848b5a5fc4a7725d6a4b623e94aa") version("1.9.1", sha256="4f22ccd5caa62077581c6adc4d35543451e547220270aed3f1abcbaa6a202133") version("1.9.0", sha256="6166c1c5ce30b9745059c3d30c8110f7c1d51871e58aa414f195cb1f91c467f5") diff --git a/var/spack/repos/builtin/packages/r-future/package.py b/var/spack/repos/builtin/packages/r-future/package.py index 5cdaa6a994..3cc6d0ecc8 100644 --- a/var/spack/repos/builtin/packages/r-future/package.py +++ b/var/spack/repos/builtin/packages/r-future/package.py @@ -28,6 +28,7 @@ class RFuture(RPackage): license("LGPL-2.1-or-later") + version("1.34.0", sha256="5839d4fd1f8beb1b18b27a7c50c1eb2bb5d80acd926b1bce9323637c8b2dfa5d") version("1.32.0", sha256="d5bb74512d069745184dd580a36449dc0b50d95b1cbbbc1605db82de596f2f76") version("1.29.0", sha256="856d1fd51d2f998c6572490c49fdcc27e5f3e0c1ade75eecdbf64a2cd0954373") version("1.28.0", sha256="6fdda66acd9a255e5baa70ff5dacd3c57ab2ecc2d87fd6abeebdfb939c051bf6") @@ -52,3 +53,4 @@ class RFuture(RPackage): depends_on("r-parallelly@1.30.0:", type=("build", "run"), when="@1.24.0:") depends_on("r-parallelly@1.32.1:", type=("build", "run"), when="@1.28.0:") depends_on("r-parallelly@1.34.0:", type=("build", "run"), when="@1.32.0:") + depends_on("r-parallelly@1.38.0:", type=("build", "run"), when="@1.34.0:") diff --git a/var/spack/repos/builtin/packages/r-gamlss-data/package.py b/var/spack/repos/builtin/packages/r-gamlss-data/package.py index 327f62a42e..da33639593 100644 --- a/var/spack/repos/builtin/packages/r-gamlss-data/package.py +++ b/var/spack/repos/builtin/packages/r-gamlss-data/package.py @@ -15,6 +15,7 @@ class RGamlssData(RPackage): cran = "gamlss.data" + version("6.0-6", sha256="bae0db19d95500b3f49f855d4ebd3ddb071c5e2d9104b27e0a73865f4909ab22") version("6.0-2", sha256="dbb3b6f855540928ccdbda497f8d552144895e34565799e8b595e704096db71e") version("5.1-4", sha256="0d3777d8c3cd76cef273aa6bde40a91688719be401195ed9bfd1e85bd7d5eeb5") version("5.1-3", sha256="4941180e7eebe97678ba02ca24c2a797bcb69d92cd34600215a94110e2a70470") diff --git a/var/spack/repos/builtin/packages/r-gamlss-dist/package.py b/var/spack/repos/builtin/packages/r-gamlss-dist/package.py index 46a8f63ad0..dc7b3e2380 100644 --- a/var/spack/repos/builtin/packages/r-gamlss-dist/package.py +++ b/var/spack/repos/builtin/packages/r-gamlss-dist/package.py @@ -21,6 +21,7 @@ class RGamlssDist(RPackage): cran = "gamlss.dist" + version("6.1-1", sha256="d2db3a7658799c2ef212aa18cb75a3ecf4f73faf8c13dfdc3c14b21ae0129069") version("6.0-5", sha256="0f88afdfb148de79d3ece66bf4631ea0dc3ecf1188680802abffd6bc7139a20e") version("6.0-3", sha256="ec90ea83cd81b894c73f987f69814077697be33abf0708e0f3e2a39d02c912bf") version("6.0-1", sha256="b563b4de6bcedcfa4f8d29198a47004e38fd2de6e0509c788015d4e3feb18154") diff --git a/var/spack/repos/builtin/packages/r-gamlss/package.py b/var/spack/repos/builtin/packages/r-gamlss/package.py index b052d0e2dc..4ab3444a07 100644 --- a/var/spack/repos/builtin/packages/r-gamlss/package.py +++ b/var/spack/repos/builtin/packages/r-gamlss/package.py @@ -20,6 +20,7 @@ class RGamlss(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("5.4-22", sha256="01e6908df92691147b884a8d58025473e18d7bf58d5f5a2d7e4f18b2a451fe2d") version("5.4-12", sha256="9f791039f7e5c3cf3f6a2da955994a8c41c43044a2d77d99b289e4f82118a6f0") version("5.4-3", sha256="6619d4fdc183ab492615d44961a126c827d18db20a0d59362e54de877f0a3076") version("5.3-4", sha256="72707187471fd35c5379ae8c9b7b0ca87e302557f09cb3979d1cdb2e2500b01a") diff --git a/var/spack/repos/builtin/packages/r-gargle/package.py b/var/spack/repos/builtin/packages/r-gargle/package.py index 9f39688452..9e65e18527 100644 --- a/var/spack/repos/builtin/packages/r-gargle/package.py +++ b/var/spack/repos/builtin/packages/r-gargle/package.py @@ -18,12 +18,14 @@ class RGargle(RPackage): license("MIT") + version("1.5.2", sha256="4a5beb046eb50a168b4baf5d1fcd8ac20d698e7fcb6b6ef46a436ded5b039001") version("1.4.0", sha256="8e0f1edf5595d4fd27bd92f98af1cc0c1349975803d9d6f3ff0c25ee2440498b") version("1.2.1", sha256="f367e2c82f403167ae84058303a4fb0402664558a2abf0b495474a7ef1a2f020") version("1.2.0", sha256="4d46ca2933f19429ca5a2cfe47b4130a75c7cd9931c7758ade55bac0c091d73b") depends_on("r@3.3:", type=("build", "run")) depends_on("r@3.5:", type=("build", "run"), when="@1.2.1:") + depends_on("r@3.6:", type=("build", "run"), when="@1.5.0:") depends_on("r-cli@3.0.0:", type=("build", "run")) depends_on("r-cli@3.0.1:", type=("build", "run"), when="@1.4.0:") depends_on("r-fs@1.3.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-gbm/package.py b/var/spack/repos/builtin/packages/r-gbm/package.py index 6204c12b68..2c6bed6457 100644 --- a/var/spack/repos/builtin/packages/r-gbm/package.py +++ b/var/spack/repos/builtin/packages/r-gbm/package.py @@ -20,6 +20,7 @@ class RGbm(RPackage): license("GPL-2.0-or-later OR custom") + version("2.2.2", sha256="029ad2bac10c98979cf69206e94f2cc51a50667ec035f2474c44fb841950c4f4") version("2.1.8.1", sha256="8d2456124552658ee9500707c4e9992cf42cb88705008c32ea258efb4f2be80b") version("2.1.8", sha256="7d5de3b980b8f23275e86ac9bed48a497c9aa53c58e407dfd676309f38272ec1") version("2.1.5", sha256="06fbde10639dfa886554379b40a7402d1f1236a9152eca517e97738895a4466f") diff --git a/var/spack/repos/builtin/packages/r-gbrd/package.py b/var/spack/repos/builtin/packages/r-gbrd/package.py index e44000f09e..39d79da732 100644 --- a/var/spack/repos/builtin/packages/r-gbrd/package.py +++ b/var/spack/repos/builtin/packages/r-gbrd/package.py @@ -14,4 +14,5 @@ class RGbrd(RPackage): cran = "gbRd" + version("0.4.12", sha256="48cd1d2a845f4b54c307473d2fa07a4ef6a644272f91c6a953844e66cd832338") version("0.4-11", sha256="0251f6dd6ca987a74acc4765838b858f1edb08b71dbad9e563669b58783ea91b") diff --git a/var/spack/repos/builtin/packages/r-gdalutilities/package.py b/var/spack/repos/builtin/packages/r-gdalutilities/package.py index 125dafba92..671c68f937 100644 --- a/var/spack/repos/builtin/packages/r-gdalutilities/package.py +++ b/var/spack/repos/builtin/packages/r-gdalutilities/package.py @@ -23,6 +23,7 @@ class RGdalutilities(RPackage): cran = "gdalUtilities" + version("1.2.5", sha256="2a72e990080ad626205c78edc6614959b564413b7fc23132008b7259723571a7") version("1.2.4", sha256="56d2582324977f2ae0a8bc42f740cd93b22c71eb8ee6a68b5b07083e409db8c7") version("1.2.1", sha256="8f5dcc0c077bf972da9d574c62c992935311afb76a97f03ace719bc6da214a9c") version("1.2.0", sha256="ead446f7f77f952b72b9ed80c5e415cb9d8d30cfb2439c8d1a8156fa55e2b65b") diff --git a/var/spack/repos/builtin/packages/r-gdata/package.py b/var/spack/repos/builtin/packages/r-gdata/package.py index 51ff21edf0..1c24477f54 100644 --- a/var/spack/repos/builtin/packages/r-gdata/package.py +++ b/var/spack/repos/builtin/packages/r-gdata/package.py @@ -35,6 +35,7 @@ class RGdata(RPackage): license("GPL-2.0-only") + version("3.0.0", sha256="a456b9921765a705fe8e51780dfbbc6ca005abc948b2f80effeccd468601b17f") version("2.18.0.1", sha256="5e2f3d5b9398d52a4c07a4d35f5f936450a44567c7db8d8f68b4cc6946e032d9") version("2.18.0", sha256="4b287f59f5bbf5fcbf18db16477852faac4a605b10c5284c46b93fa6e9918d7f") version("2.17.0", sha256="8097ec0e4868f6bf746f821cff7842f696e874bb3a84f1b2aa977ecd961c3e4e") diff --git a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py index dde99a8f61..22091935c7 100644 --- a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py +++ b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py @@ -47,3 +47,4 @@ class RGenomeinfodbdata(RPackage): depends_on("r@3.5:", type=("build", "run"), when="@1.2.1:") depends_on("r@3.3:", type=("build", "run"), when="@0.99.0:1.1.0") + depends_on("r@3.5.0:", type=("build", "run"), when="@1.2.10:") diff --git a/var/spack/repos/builtin/packages/r-gensa/package.py b/var/spack/repos/builtin/packages/r-gensa/package.py index 7402c6808f..96402ef9a7 100644 --- a/var/spack/repos/builtin/packages/r-gensa/package.py +++ b/var/spack/repos/builtin/packages/r-gensa/package.py @@ -14,6 +14,7 @@ class RGensa(RPackage): cran = "GenSA" + version("1.1.14", sha256="66e455bb0e66d3c04af84d9dddc9b89f40b4cf9fe9ad1cf0714bcf30aa1b6837") version("1.1.8", sha256="375e87541eb6b098584afccab361dc28ff09d03cf1d062ff970208e294eca216") version("1.1.7", sha256="9d99d3d0a4b7770c3c3a6de44206811272d78ab94481713a8c369f7d6ae7b80f") diff --git a/var/spack/repos/builtin/packages/r-geometries/package.py b/var/spack/repos/builtin/packages/r-geometries/package.py index 68728af1d3..7c262ea9eb 100644 --- a/var/spack/repos/builtin/packages/r-geometries/package.py +++ b/var/spack/repos/builtin/packages/r-geometries/package.py @@ -18,6 +18,7 @@ class RGeometries(RPackage): license("MIT") + version("0.2.4", sha256="c6292acc336bb8520b8cb3672566f993fd077cb1f6f980ae39b9c9f56b971410") version("0.2.2", sha256="32d3063de0f8a751382788f85ebaee5f39d68e486253c159d553bb3d72d69141") version("0.2.0", sha256="8cf5094f3c2458fef5d755799c766afd27c66cd1c292574a6ab532d608360314") diff --git a/var/spack/repos/builtin/packages/r-geomorph/package.py b/var/spack/repos/builtin/packages/r-geomorph/package.py index 6cce7f2313..d4144663fb 100644 --- a/var/spack/repos/builtin/packages/r-geomorph/package.py +++ b/var/spack/repos/builtin/packages/r-geomorph/package.py @@ -18,6 +18,7 @@ class RGeomorph(RPackage): license("GPL-3.0-or-later") + version("4.0.8", sha256="14b4ad5a03fb58d9e7d02ddc4d0756553e9480ded3e68fd699249d58870f0c55") version("4.0.5", sha256="900d41f95a610b026763797f290ce94c10827a59b05030ed01c841c59264313b") version("4.0.4", sha256="dfded29070bc06bf1dc0d6fedaa16fea9f8eef76f0a7443a11f2835c328c6b0a") version("4.0.3", sha256="8fd77bedf2ee85f1e4aaac4b22253810d12dba0b79d78d67695d237b7184e263") @@ -31,9 +32,11 @@ class RGeomorph(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r@3.1.0:", type=("build", "run")) depends_on("r@3.5.0:", type=("build", "run"), when="@3.3.2:") + depends_on("r@4.4.0:", type=("build", "run"), when="@4.0.8:") depends_on("r-matrix", type=("build", "run")) depends_on("r-rrpp", type=("build", "run"), when="@3.0.7:") depends_on("r-rrpp@1.0.0:", type=("build", "run"), when="@4.0.1:") + depends_on("r-rrpp@2.0.1:", type=("build", "run"), when="@4.0.8:") depends_on("r-rgl", type=("build", "run")) depends_on("r-jpeg", type=("build", "run")) depends_on("r-ape", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-geor/package.py b/var/spack/repos/builtin/packages/r-geor/package.py index 60cc131b92..9ac4d6fd8b 100644 --- a/var/spack/repos/builtin/packages/r-geor/package.py +++ b/var/spack/repos/builtin/packages/r-geor/package.py @@ -15,6 +15,7 @@ class RGeor(RPackage): cran = "geoR" + version("1.9-4", sha256="ae9d977cebe0f93b2593542f8d6d060467984dcf174e84ba632307c035d7ebbd") version("1.9-2", sha256="7ce3f5256a33a9de71b22a08caba634e77344889aac7d9eed02625a90254b9d9") version("1.8-1", sha256="990647804590b925a50f72897b24bbabd331cebef0be1696a60528b2f79d6fd3") version("1.7-5.2.1", sha256="3895e49c005a5745738d190ccaad43bb0aa49c74465d4d0b4dd88c5850ed63b9") diff --git a/var/spack/repos/builtin/packages/r-gert/package.py b/var/spack/repos/builtin/packages/r-gert/package.py index 3ac439d420..1f603de052 100644 --- a/var/spack/repos/builtin/packages/r-gert/package.py +++ b/var/spack/repos/builtin/packages/r-gert/package.py @@ -19,6 +19,7 @@ class RGert(RPackage): license("MIT") + version("2.1.1", sha256="42037c041b284ae7ef4da68b784f2dfc3f72701534a8330265b1abc382eda964") version("1.9.2", sha256="42ca1b4bcafb1fdbbc7f54df0ee4476ecd19e9e7d563b53fe7064e0086ab665e") version("1.9.1", sha256="751d18760a08ae00b8de73dc3e564cf4e76b1f47c7179101320e1b70152e1fdd") version("1.6.0", sha256="8c440aeebabf1cb3b57124ec9280e0f46b2ab56f2bca07d72b5c7a7f4edc2964") diff --git a/var/spack/repos/builtin/packages/r-getopt/package.py b/var/spack/repos/builtin/packages/r-getopt/package.py index 79b26170f1..a2d60d3ced 100644 --- a/var/spack/repos/builtin/packages/r-getopt/package.py +++ b/var/spack/repos/builtin/packages/r-getopt/package.py @@ -19,6 +19,7 @@ class RGetopt(RPackage): license("GPL-2.0-or-later") + version("1.20.4", sha256="87d36cbe6dba41dbc1d78d845210266cdd08c7440d977d738a6e45db14221e8b") version("1.20.3", sha256="531f5fdfdcd6b96a73df2b39928418de342160ac1b0043861e9ea844f9fbf57f") version("1.20.2", sha256="3d6c12d32d6cd4b2909be626e570e158b3ed960e4739510e3a251e7f172de38e") version("1.20.1", sha256="1522c35b13e8546979725a68b75e3bc9d156fb06569067472405f6b8591d8654") diff --git a/var/spack/repos/builtin/packages/r-ggally/package.py b/var/spack/repos/builtin/packages/r-ggally/package.py index dac799bacf..8a29072067 100644 --- a/var/spack/repos/builtin/packages/r-ggally/package.py +++ b/var/spack/repos/builtin/packages/r-ggally/package.py @@ -18,6 +18,7 @@ class RGgally(RPackage): cran = "GGally" + version("2.2.1", sha256="8bb326665936a63f6eef92a2af1a11d1fae78dbd28d6980608d2b38ee1f586c6") version("2.1.2", sha256="30352f36bf061bc98bdd5fa373ea0f23d007040bd908c7c018c8e627e0fb28e5") version("2.1.0", sha256="7ffb86b8a4e79543cf7e6bb1e3684d738ecd8e0ba89e8ef38991898b18dd6c53") version("1.4.0", sha256="9a47cdf004c41f5e4024327b94227707f4dad3a0ac5556d8f1fba9bf0a6355fe") @@ -27,15 +28,20 @@ class RGgally(RPackage): depends_on("r-ggplot2@2.2.0:", type=("build", "run")) depends_on("r-ggplot2@3.3.0:", type=("build", "run"), when="@2.1.0:") depends_on("r-ggplot2@3.3.4:", type=("build", "run"), when="@2.1.2:") + depends_on("r-ggplot2@3.4.4:", type=("build", "run"), when="@2.2.0:") depends_on("r-dplyr@1.0.0:", type=("build", "run"), when="@2.1.0:") - depends_on("r-forcats", type=("build", "run"), when="@2.1.0:") + depends_on("r-ggstats", type=("build", "run"), when="@2.2.0:") depends_on("r-gtable@0.2.0:", type=("build", "run")) depends_on("r-lifecycle", type=("build", "run"), when="@2.1.0:") depends_on("r-plyr@1.8.3:", type=("build", "run")) depends_on("r-progress", type=("build", "run")) depends_on("r-rcolorbrewer", type=("build", "run")) - depends_on("r-reshape@0.8.5:", type=("build", "run")) depends_on("r-rlang", type=("build", "run"), when="@1.4.0:") depends_on("r-scales@1.1.0:", type=("build", "run"), when="@2.1.0:") depends_on("r-tidyr", type=("build", "run"), when="@2.1.0:") + depends_on("r-tidyr@1.3.0:", type=("build", "run"), when="@2.2.0:") + depends_on("r-magrittr", type=("build", "run"), when="@2.2.0:") depends_on("openssl", when="@1.4.0:") + + depends_on("r-forcats", type=("build", "run"), when="@2.1.0:2.1") + depends_on("r-reshape@0.8.5:", type=("build", "run"), when="@:2.1") diff --git a/var/spack/repos/builtin/packages/r-ggbeeswarm/package.py b/var/spack/repos/builtin/packages/r-ggbeeswarm/package.py index 5915714aff..d8738700fa 100644 --- a/var/spack/repos/builtin/packages/r-ggbeeswarm/package.py +++ b/var/spack/repos/builtin/packages/r-ggbeeswarm/package.py @@ -17,12 +17,14 @@ class RGgbeeswarm(RPackage): license("GPL-3.0-or-later") + version("0.7.2", sha256="fd7ca265bb892dde514d5f8d6a853fb8b32d7a673b05e9c8b50544a523299ce5") version("0.7.1", sha256="f41550335149bc2122fed0dd280d980cecd02ace79e042d5e03c1f102200ac92") version("0.6.0", sha256="bbac8552f67ff1945180fbcda83f7f1c47908f27ba4e84921a39c45d6e123333") depends_on("r@3.0.0:", type=("build", "run")) depends_on("r@3.5.0:", type=("build", "run"), when="@0.7.1:") depends_on("r-beeswarm", type=("build", "run")) + depends_on("r-cli", type=("build", "run"), when="@0.7.2:") depends_on("r-lifecycle", type=("build", "run"), when="@0.7.1:") depends_on("r-ggplot2@2.0:", type=("build", "run")) depends_on("r-ggplot2@3.3.0:", type=("build", "run"), when="@0.7.1:") diff --git a/var/spack/repos/builtin/packages/r-ggdendro/package.py b/var/spack/repos/builtin/packages/r-ggdendro/package.py index 657d9a4d49..21bfda18c2 100644 --- a/var/spack/repos/builtin/packages/r-ggdendro/package.py +++ b/var/spack/repos/builtin/packages/r-ggdendro/package.py @@ -21,9 +21,11 @@ class RGgdendro(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("0.2.0", sha256="1940c34ddb30083a4c3bc3be98b6b466dcc78e03ac22a32088744db8bff7aa69") version("0.1.23", sha256="3a33e988c4fe12eec540876ad8ba09bda998773b2d2a90e043ebae4a69fa8eb8") version("0.1.22", sha256="f0a65f3498c1abc3076df0fb56364b63bdf5d212d8931f85bcc6997510916b6a") version("0.1-20", sha256="125cae904fa5d426cccaf32ebe9c6297e9ef0c6fd3f19f61513834d03a0cf8ff") + depends_on("r@3.5:", type=("build", "run"), when="@0.2.0:") depends_on("r-mass", type=("build", "run")) depends_on("r-ggplot2@0.9.2:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ggforce/package.py b/var/spack/repos/builtin/packages/r-ggforce/package.py index 0c73a81813..cf8063a242 100644 --- a/var/spack/repos/builtin/packages/r-ggforce/package.py +++ b/var/spack/repos/builtin/packages/r-ggforce/package.py @@ -19,6 +19,7 @@ class RGgforce(RPackage): license("MIT") + version("0.4.2", sha256="c145b0e6ed6847d409ed2fe103b81234855bc0661cde2bfb4410fb23680e51a8") version("0.4.1", sha256="b44219fb63c45fa003c64bca323452f16dcace635204bc0127d3244c0f451873") version("0.3.3", sha256="2a283bb409da6b96929863a926b153bcc59b2c6f00551805db1d1d43e5929f2f") version("0.3.2", sha256="4cce8acb60ce06af44c1c76bbacd7de129eed9b51ed6a85e03a9bf55b0eff4d2") diff --git a/var/spack/repos/builtin/packages/r-ggfun/package.py b/var/spack/repos/builtin/packages/r-ggfun/package.py index 9c73c7fa48..c1aebd8afb 100644 --- a/var/spack/repos/builtin/packages/r-ggfun/package.py +++ b/var/spack/repos/builtin/packages/r-ggfun/package.py @@ -16,6 +16,7 @@ class RGgfun(RPackage): license("Artistic-2.0") + version("0.1.5", sha256="fe6c01fd68c17497f23f76dfd4e5a6edd79a6e86850b8c5054748f31527b16d3") version("0.0.9", sha256="5c740e9d1e73b77658f41ed65e21492f4e71b12c7c9ff4b9e52ebf5f8f197612") version("0.0.8", sha256="9471a12fc7af203a419767b845e6b6c1e63c080370cb8f2dac80187194122273") version("0.0.7", sha256="a83b5fb95f61e366f96d6d8e6b04dafff8e885e7c80c913614876b50ebb8e174") @@ -23,5 +24,8 @@ class RGgfun(RPackage): version("0.0.5", sha256="b1e340a8932d2cffbbbf6070ce96c9356599e9955a2b6534fcb17e599c575783") version("0.0.4", sha256="5926365f9a90baf47320baf48c40f515ef570f9c767484adea5f04219964d21e") + depends_on("r@4.1.0:", type=("build", "run"), when="@0.1.2:") + depends_on("r-cli", type=("build", "run"), when="@0.1.3:") + depends_on("r-dplyr", type=("build", "run"), when="@0.1.5:") depends_on("r-ggplot2", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ggmap/package.py b/var/spack/repos/builtin/packages/r-ggmap/package.py index 9a007a055f..c0b6fe8a04 100644 --- a/var/spack/repos/builtin/packages/r-ggmap/package.py +++ b/var/spack/repos/builtin/packages/r-ggmap/package.py @@ -18,6 +18,7 @@ class RGgmap(RPackage): license("GPL-2.0-only") + version("4.0.0", sha256="0de639357c066e3b632eb960fd811276558ce29aefa2f77ef711ff5841c734f5") version("3.0.2", sha256="ba5fe3975fd4ca1a5fbda4910c9705ac2edacec75c658177edaf87f1c55cdcae") version("3.0.1", sha256="fc824b547f1fd0b52b6fbd18a82fe6f29f97b1f592e2c61baf4686ddfd47e35d") version("3.0.0", sha256="96c24ffdc0710d0633ac4721d599d2c06f43a29c59d1e85c94ff0af30dfdb58d") @@ -26,7 +27,6 @@ class RGgmap(RPackage): depends_on("r@3.1.0:", type=("build", "run")) depends_on("r-ggplot2@2.2.0:", type=("build", "run")) - depends_on("r-rgooglemaps", type=("build", "run")) depends_on("r-png", type=("build", "run")) depends_on("r-plyr", type=("build", "run")) depends_on("r-jpeg", type=("build", "run")) @@ -44,6 +44,7 @@ class RGgmap(RPackage): depends_on("r-cli", type=("build", "run"), when="@3.0.1:") depends_on("r-rlang", type=("build", "run"), when="@3.0.1:") + depends_on("r-rgooglemaps", type=("build", "run"), when="@:3.0.2") depends_on("r-proto", type=("build", "run"), when="@:2.6.2") depends_on("r-reshape2", type=("build", "run"), when="@:2.6.2") depends_on("r-mapproj", type=("build", "run"), when="@:2.6.2") diff --git a/var/spack/repos/builtin/packages/r-ggnewscale/package.py b/var/spack/repos/builtin/packages/r-ggnewscale/package.py index 5c0d929a7f..8e4518e837 100644 --- a/var/spack/repos/builtin/packages/r-ggnewscale/package.py +++ b/var/spack/repos/builtin/packages/r-ggnewscale/package.py @@ -15,6 +15,8 @@ class RGgnewscale(RPackage): license("GPL-3.0-only") + version("0.5.0", sha256="b7f0dcb38d0e8cb4179d92f38b20489905ceb2a9602b68e2c72997d795c4df2d") version("0.4.8", sha256="c7fefa6941ecbc789507e59be13fa96327fe2549681a938c43beb06ca22a9700") depends_on("r-ggplot2@3.0.0:", type=("build", "run")) + depends_on("r-ggplot2@3.5.0:", type=("build", "run"), when="@0.5.0:") diff --git a/var/spack/repos/builtin/packages/r-ggplot2/package.py b/var/spack/repos/builtin/packages/r-ggplot2/package.py index a7f919b38c..61b80a6a7f 100644 --- a/var/spack/repos/builtin/packages/r-ggplot2/package.py +++ b/var/spack/repos/builtin/packages/r-ggplot2/package.py @@ -35,12 +35,12 @@ class RGgplot2(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.2:", type=("build", "run"), when="@3.2.0:") depends_on("r@3.3:", type=("build", "run"), when="@3.3.4:") + depends_on("r@3.5:", type=("build", "run"), when="@3.5.0:") depends_on("r-cli", type=("build", "run"), when="@3.4.0:") depends_on("r-glue", type=("build", "run"), when="@3.3.3:") depends_on("r-gtable@0.1.1:", type=("build", "run")) depends_on("r-isoband", type=("build", "run"), when="@3.3.3:") - depends_on("r-lifecycle@1.0.1:", type=("build", "run"), when="@3.4.0:") - depends_on("r-lifecycle@unknown:", type=("build", "run"), when="@3.4.2:") + depends_on("r-lifecycle@1.0.1.1:", type=("build", "run"), when="@3.4.0:") depends_on("r-mass", type=("build", "run")) depends_on("r-mgcv", type=("build", "run"), when="@3.2.0:") depends_on("r-rlang@0.3.0:", type=("build", "run"), when="@3.0.0:") @@ -52,6 +52,7 @@ class RGgplot2(RPackage): depends_on("r-scales@1.3.0:", type=("build", "run"), when="@3.5.0:") depends_on("r-tibble", type=("build", "run")) depends_on("r-vctrs@0.5.0:", type=("build", "run"), when="@3.4.0:") + depends_on("r-vctrs@0.6.0:", type=("build", "run"), when="@3.5.1:") depends_on("r-withr@2.0.0:", type=("build", "run"), when="@3.0.0:") depends_on("r-withr@2.5.0:", type=("build", "run"), when="@3.4.0:") diff --git a/var/spack/repos/builtin/packages/r-ggplotify/package.py b/var/spack/repos/builtin/packages/r-ggplotify/package.py index b87ca84a9d..561d5ea547 100644 --- a/var/spack/repos/builtin/packages/r-ggplotify/package.py +++ b/var/spack/repos/builtin/packages/r-ggplotify/package.py @@ -19,6 +19,7 @@ class RGgplotify(RPackage): license("Artistic-2.0") + version("0.1.2", sha256="01bae5759e14e211bddb04413e094ba31399b513989894ea08602d202f990e87") version("0.1.0", sha256="178f73d6d3dc391c3efb1a62c95fe38587044f9e3288dffb915d3687941bb38a") version("0.0.5", sha256="035ea6a70023c4819c8a486d0fd94c2765aa4d6df318747e104eeb9829b9d65d") version("0.0.3", sha256="7e7953a2933aa7127a0bac54375e3e0219a0744cfc3249c3d7b76065f7a51892") diff --git a/var/spack/repos/builtin/packages/r-ggraph/package.py b/var/spack/repos/builtin/packages/r-ggraph/package.py index cc887295f0..ad065c4537 100644 --- a/var/spack/repos/builtin/packages/r-ggraph/package.py +++ b/var/spack/repos/builtin/packages/r-ggraph/package.py @@ -19,6 +19,7 @@ class RGgraph(RPackage): license("MIT") + version("2.2.1", sha256="4405f8a907ad8fee68b5d4991f0bc8f35d6c0facbb7467c2ce425d3ec8b23af1") version("2.1.0", sha256="686fdb22dc4f613273fb755ec42399a208b4d10348eecd1a217afd4612245c1f") version("2.0.6", sha256="7b0ac90d834a3ce5641b4bca159d59d09607ddaab592908361b75cffb648d40a") version("2.0.5", sha256="e36ad49dba92ee8652e18b1fb197be0ceb9f0a2f8faee2194453a62578449654") @@ -27,20 +28,25 @@ class RGgraph(RPackage): depends_on("r@2.10:", type=("build", "run")) depends_on("r-ggplot2@3.0.0:", type=("build", "run")) - depends_on("r-rcpp@0.12.2:", type=("build", "run")) + depends_on("r-ggplot2@3.5.0:", type=("build", "run"), when="@2.2.0:") depends_on("r-dplyr", type=("build", "run")) depends_on("r-ggforce@0.3.1:", type=("build", "run")) depends_on("r-igraph@1.0.0:", type=("build", "run")) depends_on("r-scales", type=("build", "run")) depends_on("r-mass", type=("build", "run")) - depends_on("r-digest", type=("build", "run")) - depends_on("r-gtable", type=("build", "run")) depends_on("r-ggrepel", type=("build", "run")) depends_on("r-viridis", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) depends_on("r-tidygraph", type=("build", "run")) depends_on("r-graphlayouts@0.5.0:", type=("build", "run")) + depends_on("r-graphlayouts@1.1.0:", type=("build", "run"), when="@2.2.0:") depends_on("r-withr", type=("build", "run"), when="@2.0.4:") depends_on("r-lifecycle", type=("build", "run"), when="@2.1.0:") + depends_on("r-memoise", type=("build", "run"), when="@2.2.0:") depends_on("r-vctrs", type=("build", "run"), when="@2.1.0:") depends_on("r-cli", type=("build", "run"), when="@2.1.0:") + depends_on("r-cpp11", type=("build", "run"), when="@2.2.0:") + + depends_on("r-rcpp@0.12.2:", type=("build", "run"), when="@:2.1.0") + depends_on("r-digest", type=("build", "run"), when="@:2.1.0") + depends_on("r-gtable", type=("build", "run"), when="@:2.1.0") diff --git a/var/spack/repos/builtin/packages/r-ggrastr/package.py b/var/spack/repos/builtin/packages/r-ggrastr/package.py index 67f07d652d..c25cf879ec 100644 --- a/var/spack/repos/builtin/packages/r-ggrastr/package.py +++ b/var/spack/repos/builtin/packages/r-ggrastr/package.py @@ -18,6 +18,7 @@ class RGgrastr(RPackage): license("MIT") + version("1.0.2", sha256="cb27406dca99cea6440adf6edb7eb53141b60322452f5a5d4409e36516ad20d1") version("1.0.1", sha256="82d6e90fa38dec85e829f71018532ed5b709a50a585455fc07cb3bae282f5d1f") depends_on("r@3.2.2:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ggrepel/package.py b/var/spack/repos/builtin/packages/r-ggrepel/package.py index ecb836d2bb..790f13ec54 100644 --- a/var/spack/repos/builtin/packages/r-ggrepel/package.py +++ b/var/spack/repos/builtin/packages/r-ggrepel/package.py @@ -17,6 +17,7 @@ class RGgrepel(RPackage): license("GPL-3.0-only OR custom") + version("0.9.5", sha256="d1e600e56c2ad345961ed23f30f04b81c631ff94bd6762a260c62e0206cf8caa") version("0.9.3", sha256="b9eba0e2edee84db0276b49e4834b65f5369edc4bc56f4cacc13e0d1c39a005c") version("0.9.2", sha256="0a3088c48177528e2a65defebbc4f09a744ebb44408588f688811f8d0d827488") version("0.9.1", sha256="29fb916d4799ba6503a5dd019717ffdf154d2aaae9ff1736f03e2be24af6bdfc") diff --git a/var/spack/repos/builtin/packages/r-ggridges/package.py b/var/spack/repos/builtin/packages/r-ggridges/package.py index b91e7d0b8d..48fae13e22 100644 --- a/var/spack/repos/builtin/packages/r-ggridges/package.py +++ b/var/spack/repos/builtin/packages/r-ggridges/package.py @@ -17,6 +17,7 @@ class RGgridges(RPackage): license("GPL-2.0-only OR custom") + version("0.5.6", sha256="efccaa309a150d11c6b402b912e618ea041f25cca3101f32cd821a6f41684e35") version("0.5.4", sha256="2bf71c2034804cec637e6748dc51d8cadad01d3ea4d14ace754327f082e8d851") version("0.5.3", sha256="f5eafab17f2d4a8a2a83821ad3e96ae7c26b62bbce9de414484c657383c7b42e") version("0.5.1", sha256="01f87cdcdf2052ed9c078d9352465cdeda920a41e2ca55bc154c1574fc651c36") @@ -27,6 +28,7 @@ class RGgridges(RPackage): depends_on("r@3.2:", type=("build", "run")) depends_on("r-ggplot2@2.2.0:", type=("build", "run")) depends_on("r-ggplot2@3.0.0:", type=("build", "run"), when="@0.5.3:") + depends_on("r-ggplot2@3.4.0:", type=("build", "run"), when="@0.5.5:") depends_on("r-scales@0.4.1:", type=("build", "run")) depends_on("r-withr@2.1.1:", type=("build", "run"), when="@0.5.0:") diff --git a/var/spack/repos/builtin/packages/r-ggsci/package.py b/var/spack/repos/builtin/packages/r-ggsci/package.py index 5c5f4a75fb..fd0574863f 100644 --- a/var/spack/repos/builtin/packages/r-ggsci/package.py +++ b/var/spack/repos/builtin/packages/r-ggsci/package.py @@ -17,6 +17,7 @@ class RGgsci(RPackage): license("GPL-3.0-or-later") + version("3.2.0", sha256="41d8ed4c01c3740028bdf2ba9c5550f1142061e4a40c93b1d2160719c59c3c4a") version("3.0.0", sha256="8901316516d78f82a2a8685d93ba479424bcfd8cb5e28a28adbd50e68964e129") version("2.9", sha256="4af14e6f3657134c115d5ac5e65a2ed74596f9a8437c03255447cd959fe9e33c") version("2.8", sha256="b4ce7adce7ef23edf777866086f98e29b2b45b58fed085bbd1ffe6ab52d74ae8") diff --git a/var/spack/repos/builtin/packages/r-ggstats/package.py b/var/spack/repos/builtin/packages/r-ggstats/package.py new file mode 100644 index 0000000000..b1b3678954 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-ggstats/package.py @@ -0,0 +1,33 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RGgstats(RPackage): + """Provides new statistics, new geometries and new positions for + 'ggplot2' and a suite of functions to facilitate the creation of + statistical plots.""" + + homepage = "https://larmarange.github.io/ggstats/" + cran = "ggstats" + + license("GPL-3.0-or-later", checked_by="wdconinc") + + version("0.6.0", sha256="f80aaa229f542cb18174b9ab82b0026c6bd3331f22bf2662712ab6af480b6d80") + + depends_on("r-broom-helpers@1.14.0:", type=("build", "run")) + depends_on("r-cli", type=("build", "run")) + depends_on("r-dplyr", type=("build", "run")) + depends_on("r-forcats", type=("build", "run")) + depends_on("r-ggplot2@3.4.0:", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run")) + depends_on("r-magrittr", type=("build", "run")) + depends_on("r-patchwork", type=("build", "run")) + depends_on("r-purrr", type=("build", "run")) + depends_on("r-rlang", type=("build", "run")) + depends_on("r-scales", type=("build", "run")) + depends_on("r-stringr", type=("build", "run")) + depends_on("r-tidyr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ggthemes/package.py b/var/spack/repos/builtin/packages/r-ggthemes/package.py index a2689071eb..d325a1add6 100644 --- a/var/spack/repos/builtin/packages/r-ggthemes/package.py +++ b/var/spack/repos/builtin/packages/r-ggthemes/package.py @@ -19,11 +19,13 @@ class RGgthemes(RPackage): license("GPL-2.0-only") + version("5.1.0", sha256="074819acfe8bb2233426a0fef3bb448c5ce817bb14d517252fa05932e28bbd0e") version("4.2.4", sha256="7b35168cf5b68f6f52dd533a1b345ec87e09d1a85ca68e8dc5377cdf95718567") version("4.2.0", sha256="5bb3fe94819fe2cce7865f07a6e6ea5c59d3996f78d1c0836ad406f69efb3367") depends_on("r@3.3.0:", type=("build", "run")) depends_on("r-ggplot2@3.0.0:", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@5.0.0:") depends_on("r-purrr", type=("build", "run")) depends_on("r-scales", type=("build", "run")) depends_on("r-stringr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ggvis/package.py b/var/spack/repos/builtin/packages/r-ggvis/package.py index ac8864a19c..75ead306ea 100644 --- a/var/spack/repos/builtin/packages/r-ggvis/package.py +++ b/var/spack/repos/builtin/packages/r-ggvis/package.py @@ -17,6 +17,7 @@ class RGgvis(RPackage): license("GPL-2.0-only OR custom") + version("0.4.9", sha256="69b9d184789c90aedd2f336d43033a8b710a16b052580bf9e7ce229ac25ba12f") version("0.4.8", sha256="3d5480a0b97a57c26b595785f826b13d7695dab1f1dd8fcf5d7964fa8546a26a") version("0.4.7", sha256="9e6b067e11d497c796d42156570e2481afb554c5db265f42afbb74d2ae0865e3") version("0.4.4", sha256="1332ea122b768688c8a407a483be80febc4576de0ec8929077738421b27cafaf") diff --git a/var/spack/repos/builtin/packages/r-gh/package.py b/var/spack/repos/builtin/packages/r-gh/package.py index e20962e593..7be200eaee 100644 --- a/var/spack/repos/builtin/packages/r-gh/package.py +++ b/var/spack/repos/builtin/packages/r-gh/package.py @@ -15,6 +15,7 @@ class RGh(RPackage): license("MIT") + version("1.4.1", sha256="76bd3f2a31eeaf76a633362899a20b0f7e8fb6159d4777baf3da2a47854292af") version("1.4.0", sha256="68c69fcd18429b378e639a09652465a4e92b7b5b5704804d0c5b1ca2b9b58b71") version("1.3.1", sha256="fbaea2abdeceb03d28839fd0e58c2eea01092f9ef92dcc044718ef0d298612ef") version("1.3.0", sha256="a44039054e8ca56496f2d9c7a10cdadf4a7383bc91086e768ba7e7f1fbcaed1c") @@ -23,13 +24,16 @@ class RGh(RPackage): version("1.0.1", sha256="f3c02b16637ae390c3599265852d94b3de3ef585818b260d00e7812595b391d2") depends_on("r@3.4:", type=("build", "run"), when="@1.3.1:") + depends_on("r@3.6:", type=("build", "run"), when="@1.4.1:") depends_on("r-cli", type=("build", "run"), when="@1.1.0:") depends_on("r-cli@2.0.1:", type=("build", "run"), when="@1.2.0:") depends_on("r-cli@3.0.1:", type=("build", "run"), when="@1.3.1:") depends_on("r-gitcreds", type=("build", "run"), when="@1.2.0:") + depends_on("r-glue", type=("build", "run"), when="@1.4.1:") depends_on("r-httr2", type=("build", "run"), when="@1.4.0:") depends_on("r-ini", type=("build", "run")) depends_on("r-jsonlite", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@1.4.1:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.4.0:") depends_on("r-httr@1.2:", type=("build", "run"), when="@1.1.0:1.3.1") diff --git a/var/spack/repos/builtin/packages/r-git2r/package.py b/var/spack/repos/builtin/packages/r-git2r/package.py index a6718ceec1..3586585e51 100644 --- a/var/spack/repos/builtin/packages/r-git2r/package.py +++ b/var/spack/repos/builtin/packages/r-git2r/package.py @@ -17,6 +17,7 @@ class RGit2r(RPackage): license("GPL-2.0-only") + version("0.33.0", sha256="1855b68d0e22566f1c255fdcb8e13282a2bebf55cbc804a8591dc8047f0e1895") version("0.32.0", sha256="1b5d254c0c684a56751d26d482823d0006964eb1f55c558f365d037f5e984671") version("0.31.0", sha256="f1db9278fa4604600a64beaedcf86dda595d7c8a10cdb1f7300a6635e73cd66d") version("0.30.1", sha256="85d913ddc7659e32c1b98ebc247fa1cc1b7717a5bd413fa78ea84696986ca840") @@ -30,6 +31,7 @@ class RGit2r(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@0.31.0:") + depends_on("r@4.0:", type=("build", "run"), when="@0.33.0:") depends_on("libgit2") depends_on("zlib-api") depends_on("openssl") diff --git a/var/spack/repos/builtin/packages/r-glmnet/package.py b/var/spack/repos/builtin/packages/r-glmnet/package.py index 1f613f021a..31e9bf0499 100644 --- a/var/spack/repos/builtin/packages/r-glmnet/package.py +++ b/var/spack/repos/builtin/packages/r-glmnet/package.py @@ -20,6 +20,7 @@ class RGlmnet(RPackage): license("GPL-2.0-only") + version("4.1-8", sha256="1ddbe5ce07076d1bdf58b0202ebd0ceac8eeb4796c5175681adb9e58c30ddcfe") version("4.1-7", sha256="b3a0b606d99df0256eb68e6ebd271e071b246900a4379641af2e7d548c70eaa8") version("4.1-4", sha256="f6b0f70a0b3d81ff91c2b94f795a2a32e90dd458270f1a29e49e085dd65000f9") version("4.1-3", sha256="64bc35aa40b6e580cfb8a21e649eb103e996e8747a10c476b8bb9545c846325a") diff --git a/var/spack/repos/builtin/packages/r-globals/package.py b/var/spack/repos/builtin/packages/r-globals/package.py index 954094aeca..c9c1cca547 100644 --- a/var/spack/repos/builtin/packages/r-globals/package.py +++ b/var/spack/repos/builtin/packages/r-globals/package.py @@ -19,6 +19,7 @@ class RGlobals(RPackage): license("LGPL-2.1-or-later") + version("0.16.3", sha256="d73ced94248d8b81d29d774bdfc41496274d7da683a5d84440aed6a501a18c5b") version("0.16.2", sha256="682c26a95fa6c4e76a3a875be1a3192fc5b88e036c80dfa3b256add0336d770a") version("0.16.1", sha256="f7f63a575a3dd518c6afeabb4116bd26692a2a250df113059bc1a5b4711a1e95") version("0.15.0", sha256="f83689a420590b0d62b049c40a944c1c8c7202b3f1cc12102712c63104e99496") diff --git a/var/spack/repos/builtin/packages/r-glue/package.py b/var/spack/repos/builtin/packages/r-glue/package.py index a52dfa812f..e31323deda 100644 --- a/var/spack/repos/builtin/packages/r-glue/package.py +++ b/var/spack/repos/builtin/packages/r-glue/package.py @@ -19,6 +19,7 @@ class RGlue(RPackage): license("MIT") + version("1.7.0", sha256="1af51b51f52c1aeb3bfe9349f55896dd78b5542ffdd5654e432e4d646e4a86dc") version("1.6.2", sha256="9da518f12be584c90e75fe8e07f711ee3f6fc0d03d817f72c25dc0f66499fdbf") version("1.6.1", sha256="318c2f9544f1204216009f512793c44d6bbe178ff2012f56fa5ffb5e1da978db") version("1.6.0", sha256="77bef37ef2c47aad6188ea772880591c5763cce4b1c256e10e68e7c3ec6b4338") @@ -32,3 +33,4 @@ class RGlue(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.2:", type=("build", "run"), when="@1.4.2:") depends_on("r@3.4:", type=("build", "run"), when="@1.6.0:") + depends_on("r@3.6:", when="@1.7.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-gmodels/package.py b/var/spack/repos/builtin/packages/r-gmodels/package.py index f43e4c2660..7f1cf3a5fa 100644 --- a/var/spack/repos/builtin/packages/r-gmodels/package.py +++ b/var/spack/repos/builtin/packages/r-gmodels/package.py @@ -13,6 +13,7 @@ class RGmodels(RPackage): license("GPL-2.0-only") + version("2.19.1", sha256="bb57b83274dcc6c62eeb0d0b041d81ed19daca927bcd3872c4667ccfe3e9888d") version("2.18.1.1", sha256="da7d48021b7cd2fd8a7cd8d0bb9658b12342a32698a13877b25ca94aa03f1e95") version("2.18.1", sha256="626140a34eb8c53dd0a06511a76c71bc61c48777fa76fcc5e6934c9c276a1369") version("2.16.2", sha256="ab018894bdb376c5bd6bc4fbc4fe6e86590f4106795a586ef196fbb6699ec47d") diff --git a/var/spack/repos/builtin/packages/r-gmp/package.py b/var/spack/repos/builtin/packages/r-gmp/package.py index 85d4797c3a..615fba4dd2 100644 --- a/var/spack/repos/builtin/packages/r-gmp/package.py +++ b/var/spack/repos/builtin/packages/r-gmp/package.py @@ -17,6 +17,7 @@ class RGmp(RPackage): license("GPL-2.0-or-later") + version("0.7-4", sha256="a7d6b40f77d2619c11db5170b8f47336f7c5fa1db7eed0ac9d8a432e41053919") version("0.7-1", sha256="a6873dc65218905cb7615cb8e2522258f3740e29c0632473d58a1cb409835db6") version("0.6-7", sha256="6333fe691f267aa29f8078f7f738dda50c496f660357276fd33e28d607363f85") version("0.6-6", sha256="87fa95a8084855d2137b3863b6b8f3c277280dbe3a6a230e359cf32c3bed2793") diff --git a/var/spack/repos/builtin/packages/r-googleauthr/package.py b/var/spack/repos/builtin/packages/r-googleauthr/package.py index 81e0152f89..6e7953fb88 100644 --- a/var/spack/repos/builtin/packages/r-googleauthr/package.py +++ b/var/spack/repos/builtin/packages/r-googleauthr/package.py @@ -15,6 +15,7 @@ class RGoogleauthr(RPackage): cran = "googleAuthR" + version("2.0.2", sha256="fd55c85b5f78aa52b6e5cabd4143162cb497ab7288c8db3676acf58a0f393996") version("2.0.1", sha256="9b19a63bc250151674f20b27389baa95c10cc62dc7c3c0ff12a8d684bdb8a14b") version("2.0.0", sha256="ba504baf3bde2e1b3e988bee7602df5765cc6ca542cf0ab76a782c4e60966feb") diff --git a/var/spack/repos/builtin/packages/r-googledrive/package.py b/var/spack/repos/builtin/packages/r-googledrive/package.py index 9f39117c08..c9e45bb0cf 100644 --- a/var/spack/repos/builtin/packages/r-googledrive/package.py +++ b/var/spack/repos/builtin/packages/r-googledrive/package.py @@ -15,20 +15,24 @@ class RGoogledrive(RPackage): license("MIT") + version("2.1.1", sha256="0b8b4f74ba3630b0347249a32a80bc5fc2e8b63ad2952702f30162bd2d38fb82") version("2.1.0", sha256="0d70353bbf1bebc96d3987ebd9cbb2b0902e6ddc4cdccece3d07c2bb688c4b74") version("2.0.0", sha256="605c469a6a086ef4b049909c2e20a35411c165ce7ce4f62d68fd39ffed8c5a26") depends_on("r@3.3:", type=("build", "run")) depends_on("r@3.5:", type=("build", "run"), when="@2.1.0:") + depends_on("r@3.6:", type=("build", "run"), when="@2.1.1:") depends_on("r-cli@3.0.0:", type=("build", "run")) depends_on("r-gargle@1.2.0:", type=("build", "run")) depends_on("r-gargle@1.3.0:", type=("build", "run"), when="@2.1.0:") + depends_on("r-gargle@1.5.0:", type=("build", "run"), when="@2.1.1:") depends_on("r-glue@1.4.2:", type=("build", "run")) depends_on("r-httr", type=("build", "run")) depends_on("r-jsonlite", type=("build", "run")) depends_on("r-lifecycle", type=("build", "run")) depends_on("r-magrittr", type=("build", "run")) depends_on("r-pillar", type=("build", "run")) + depends_on("r-pillar@1.9.0:", type=("build", "run"), when="@2.1.1:") depends_on("r-purrr@0.2.3:", type=("build", "run")) depends_on("r-purrr@1.0.1:", type=("build", "run"), when="@2.1.0:") depends_on("r-rlang@0.4.9:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-googlesheets4/package.py b/var/spack/repos/builtin/packages/r-googlesheets4/package.py index a959eb236b..0a1afe0dc2 100644 --- a/var/spack/repos/builtin/packages/r-googlesheets4/package.py +++ b/var/spack/repos/builtin/packages/r-googlesheets4/package.py @@ -21,6 +21,7 @@ class RGooglesheets4(RPackage): license("MIT") + version("1.1.1", sha256="c5cc63348c54b9de8492e7b12b249245746ea1ff33e306f12431f4fc9386fccf") version("1.1.0", sha256="50e15543bef5b8d8cda36f6ea8a1d59b256d889cd3cedddc91f00ae30c8c8ec9") version("1.0.1", sha256="284ecbce98944093cb065c1b0b32074eae7b45fd74b87d7815c7ca6deca76591") version("1.0.0", sha256="0a107d76aac99d6db48d97ce55810c1412b2197f457b8476f676169a36c7cc7a") @@ -28,11 +29,13 @@ class RGooglesheets4(RPackage): depends_on("r@3.3:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@1.0.1:") depends_on("r@3.5:", type=("build", "run"), when="@1.1.0:") + depends_on("r@3.6:", type=("build", "run"), when="@1.1.1:") depends_on("r-cellranger", type=("build", "run")) depends_on("r-cli@3.0.0:", type=("build", "run")) depends_on("r-curl", type=("build", "run")) depends_on("r-gargle@1.2.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-gargle@1.3.0:", type=("build", "run"), when="@1.1.0:") + depends_on("r-gargle@1.5.0:", type=("build", "run"), when="@1.1.1:") depends_on("r-glue@1.3.0:", type=("build", "run")) depends_on("r-googledrive@2.0.0:", type=("build", "run")) depends_on("r-googledrive@2.1.0:", type=("build", "run"), when="@1.1.0:") diff --git a/var/spack/repos/builtin/packages/r-googlevis/package.py b/var/spack/repos/builtin/packages/r-googlevis/package.py index 8200e7c0d6..93a6e5b93d 100644 --- a/var/spack/repos/builtin/packages/r-googlevis/package.py +++ b/var/spack/repos/builtin/packages/r-googlevis/package.py @@ -19,6 +19,7 @@ class RGooglevis(RPackage): license("CC-BY-SA-4.0") + version("0.7.3", sha256="5647ff552de5216b56ae758f29e411d04b754f482adbd3f41277d741b7708c6b") version("0.7.1", sha256="335931059ea8645f824b01a06d30fafb4e38b47cd610a5eee20628801767f218") version("0.7.0", sha256="5f1636024e678f9973e3ce605b46f46ea9cdffd58b98e315b495e66f34eb02e9") version("0.6.11", sha256="f8c90b6c51da7bf184bff6762d98fc24faba1b634724ecdb987161ee10987b97") diff --git a/var/spack/repos/builtin/packages/r-gparotation/package.py b/var/spack/repos/builtin/packages/r-gparotation/package.py index d1a4861746..20c35487d6 100644 --- a/var/spack/repos/builtin/packages/r-gparotation/package.py +++ b/var/spack/repos/builtin/packages/r-gparotation/package.py @@ -14,6 +14,7 @@ class RGparotation(RPackage): cran = "GPArotation" + version("2024.3-1", sha256="88f657af29789591d581e0c529fd50ef1307abfb33e0403209bd3e591e2654da") version("2023.3-1", sha256="8748086c3d45286b7c9a81f0f8e58df75a09ba555d48a6eb8cd94af0c7c92a26") version("2022.10-2", sha256="04f72d8f3a9c204df5df904be563ec272a8437a707daee8823b2a690dde21917") version("2022.4-1", sha256="231e7edcdcc091fbecfb4f2e88d1a4344967cf7ea58074b385a4b8b48d9da224") diff --git a/var/spack/repos/builtin/packages/r-gplots/package.py b/var/spack/repos/builtin/packages/r-gplots/package.py index bde5c06bef..f56d39a453 100644 --- a/var/spack/repos/builtin/packages/r-gplots/package.py +++ b/var/spack/repos/builtin/packages/r-gplots/package.py @@ -34,6 +34,7 @@ class RGplots(RPackage): license("GPL-2.0-only") + version("3.1.3.1", sha256="1ae1de94f27583ad84543a15f042b8dbd0850c56447929c7157787d755211af2") version("3.1.3", sha256="9f853b9e205264d087e61e8825f797ce36c9eb585b187dab794563613a526716") version("3.1.1", sha256="f9ae19c2574b6d41adbeccaf7bc66cf56d7b2769004daba7e0038d5fbd821339") version("3.0.1.1", sha256="7db103f903a25d174cddcdfc7b946039b61e236c95084b90ad17f1a41da3770c") diff --git a/var/spack/repos/builtin/packages/r-graphlayouts/package.py b/var/spack/repos/builtin/packages/r-graphlayouts/package.py index 7a0aadaed5..57e5a06145 100644 --- a/var/spack/repos/builtin/packages/r-graphlayouts/package.py +++ b/var/spack/repos/builtin/packages/r-graphlayouts/package.py @@ -19,6 +19,7 @@ class RGraphlayouts(RPackage): license("MIT") + version("1.1.1", sha256="7bc2459a02b1339ac01184a76687a3e50de5680f4699b5966a3f2e6a882f3801") version("0.8.4", sha256="778d8f7e190b05d0dbbaa7e6dbdfc0b8fef3c83b71333a6fa89926e6c04690fd") version("0.8.3", sha256="f9e4e5d794b4d1c6eba962490b3220d09b73e10893f5fa3be210240bfc654421") version("0.8.2", sha256="0fa2777a2c159f3ef1209cd96838d2651d144c9c971abfef1d22bc6376f47bec") diff --git a/var/spack/repos/builtin/packages/r-grbase/package.py b/var/spack/repos/builtin/packages/r-grbase/package.py index ce963aa539..d304465f2f 100644 --- a/var/spack/repos/builtin/packages/r-grbase/package.py +++ b/var/spack/repos/builtin/packages/r-grbase/package.py @@ -26,6 +26,7 @@ class RGrbase(RPackage): cran = "gRbase" + version("2.0.2", sha256="36720e49b82e360166386c9b3bf17838aeb6d9b921e7e01d48f8a115f9a02e97") version("1.8.9", sha256="dacab442d896e4593c6196e8446b75c4144a1c4ebc3f039dc624516038193d7e") version("1.8.8", sha256="fdd5d1ca8adb74e8bd2b210c9a652a10e60a90b40450cd8a295b06af41acf9db") version("1.8.7", sha256="01d77e1b029ac22b4e13f07384285f363733a42aba842eddfc5e1aceea99f808") @@ -35,13 +36,15 @@ class RGrbase(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r@3.0.2:", type=("build", "run")) depends_on("r@3.6.0:", type=("build", "run"), when="@1.8-6.7:") - depends_on("r-biocmanager", type=("build", "run"), when="@1.8.7:") - depends_on("r-graph", type=("build", "run")) - depends_on("r-rbgl", type=("build", "run")) - depends_on("r-rgraphviz", type=("build", "run"), when="@1.8-6.7:") + depends_on("r@4.2.0:", type=("build", "run"), when="@2.0.2:") depends_on("r-igraph", type=("build", "run")) - depends_on("r-magrittr", type=("build", "run")) + depends_on("r-magrittr", type=("build", "run"), when="@:2.0.1") depends_on("r-matrix", type=("build", "run")) depends_on("r-rcpp@0.11.1:", type=("build", "run")) depends_on("r-rcppeigen", type=("build", "run")) depends_on("r-rcpparmadillo", type=("build", "run")) + + depends_on("r-biocmanager", type=("build", "run"), when="@1.8.7:1.9") + depends_on("r-graph", type=("build", "run"), when="@:1.9") + depends_on("r-rbgl", type=("build", "run"), when="@:1.9") + depends_on("r-rgraphviz", type=("build", "run"), when="@1.8-6.7:1.9") diff --git a/var/spack/repos/builtin/packages/r-gsa/package.py b/var/spack/repos/builtin/packages/r-gsa/package.py index 71c0da0a61..cb18bcb178 100644 --- a/var/spack/repos/builtin/packages/r-gsa/package.py +++ b/var/spack/repos/builtin/packages/r-gsa/package.py @@ -11,5 +11,6 @@ class RGsa(RPackage): cran = "GSA" + version("1.03.3", sha256="5459786190f40339addc45e7bb58c6a983548aa8feac7277ea7ec0662c5a282c") version("1.03.2", sha256="177d6059fc645d3d8883806d2dea1c5dfc68efdada9aadde8a96b6d57acf35b8") version("1.03.1", sha256="e192d4383f53680dbd556223ea5f8cad6bae62a80a337ba5fd8d05a8aee6a917") diff --git a/var/spack/repos/builtin/packages/r-gsodr/package.py b/var/spack/repos/builtin/packages/r-gsodr/package.py index da64fb0953..128bd3219c 100644 --- a/var/spack/repos/builtin/packages/r-gsodr/package.py +++ b/var/spack/repos/builtin/packages/r-gsodr/package.py @@ -31,6 +31,7 @@ class RGsodr(RPackage): license("MIT") + version("4.1.1", sha256="d5bf80244b5562206f459cb0ed588c11f8edf4eb2a26e2715be7938ec6be92e0") version("3.1.8", sha256="f43668b14be30632086b832be83c74fa7c25e123fbce0d0203e992a0c11e7c8d") version("3.1.6", sha256="fbeac54e86fba1e4415b41608ca59cf50be1b421cc890eb5c5b0d6d1c9229f6a") version("3.1.5", sha256="37682141707d7e29fab653ccdeb154fea2c085080f686b33f1a54140608e824d") @@ -43,7 +44,7 @@ class RGsodr(RPackage): depends_on("r-curl", type=("build", "run")) depends_on("r-data-table@1.11.6:", type=("build", "run"), when="@:2.1.2") depends_on("r-data-table", type=("build", "run")) - depends_on("r-httr", type=("build", "run")) depends_on("r-r-utils", type=("build", "run")) + depends_on("r-httr", type=("build", "run"), when="@:3.1.8") depends_on("r-future-apply", type=("build", "run"), when="@:2.1.2") diff --git a/var/spack/repos/builtin/packages/r-gss/package.py b/var/spack/repos/builtin/packages/r-gss/package.py index 6cc95a075d..22b0201305 100644 --- a/var/spack/repos/builtin/packages/r-gss/package.py +++ b/var/spack/repos/builtin/packages/r-gss/package.py @@ -16,6 +16,7 @@ class RGss(RPackage): license("GPL-2.0-or-later") + version("2.2-7", sha256="3b13144702c570c83462b4ea2ad17f4bd630cff5bf2ab0347a33c7e86a4f3f6a") version("2.2-4", sha256="953e89dfe3bee9cac51df3e5325bf4d1496ad76e4393706c4efdb1834c0c7441") version("2.2-3", sha256="24306401cf4e5869f8a690eca7e17c044ece83edd66969bd2daf5976272d244b") version("2.2-2", sha256="1da4da894378ee730cff9628e8b4d2a0d7dfa344b94e5bce6953e66723c21fe4") diff --git a/var/spack/repos/builtin/packages/r-gtable/package.py b/var/spack/repos/builtin/packages/r-gtable/package.py index 1e05bf47a5..eb6c091d62 100644 --- a/var/spack/repos/builtin/packages/r-gtable/package.py +++ b/var/spack/repos/builtin/packages/r-gtable/package.py @@ -19,6 +19,7 @@ class RGtable(RPackage): license("MIT") + version("0.3.5", sha256="b19fc1a30359945adbab7d4e915fe95523a839c380e34ae705d70b7ebddeea72") version("0.3.3", sha256="2f9a58d978e2a487b7fd8841539ea33cf948e55ddf6f7a9bd2dd3362600a7b3a") version("0.3.1", sha256="8bd62c5722d5188914d667cabab12991c555f657f4f5ce7b547571ae3aec7cb5") version("0.3.0", sha256="fd386cc4610b1cc7627dac34dba8367f7efe114b968503027fb2e1265c67d6d3") diff --git a/var/spack/repos/builtin/packages/r-gtools/package.py b/var/spack/repos/builtin/packages/r-gtools/package.py index 2a6d23fc12..9cff33ad4e 100644 --- a/var/spack/repos/builtin/packages/r-gtools/package.py +++ b/var/spack/repos/builtin/packages/r-gtools/package.py @@ -45,6 +45,7 @@ class RGtools(RPackage): license("GPL-2.0-only") + version("3.9.5", sha256="dee9b6c1152db1a5dc427d074b32bbbb738708683f17a95e0e95e4d79fdf174b") version("3.9.4", sha256="59cf8b194fe98b1cc05dbb4d686810a1068f59d8b402b731548a898ece85f111") version("3.9.3", sha256="7afb53277b382d5752f4597ae433f3c0addf5e8eb24d01a9562faf2a01e33133") version("3.9.2.1", sha256="ec5febad7bb33812684b39679b0bce8a668361b87714f7388546e0f4ac02af5f") diff --git a/var/spack/repos/builtin/packages/r-gwmodel/package.py b/var/spack/repos/builtin/packages/r-gwmodel/package.py index 4a83437510..74c48ee274 100644 --- a/var/spack/repos/builtin/packages/r-gwmodel/package.py +++ b/var/spack/repos/builtin/packages/r-gwmodel/package.py @@ -24,6 +24,7 @@ class RGwmodel(RPackage): cran = "GWmodel" + version("2.3-3", sha256="5f69d000d7ffba491f1dafbad5ec0b5fcbbdb28831092252a8b409163d6ad33c") version("2.2-9", sha256="3696e0f24994df4f393dbcb2e74bc0808704b80e1203247be3911fc3bcdb5f18") version("2.2-8", sha256="5b1890dbf75502e89b651efd9158be77b3cfa764a5717f9889f438ed2b0a4da2") version("2.2-2", sha256="4e2b221b85fbc828ffc4f057c137ded849afcaac2a75c27d2d6d0a6db17f8a06") @@ -32,14 +33,18 @@ class RGwmodel(RPackage): version("2.0-9", sha256="b479af2c19d4aec30f1883d00193d52e342c609c1badcb51cc0344e4404cffa7") depends_on("r@3.0.0:", type=("build", "run")) - depends_on("r-maptools@0.5-2:", type=("build", "run")) depends_on("r-robustbase", type=("build", "run")) + depends_on("r-sf", type=("build", "run"), when="@2.3-1:") depends_on("r-sp", type=("build", "run")) - depends_on("r-sp@1.4-0:", type=("build", "run"), when="@2.2-2:") - depends_on("r-rcpp", type=("build", "run")) + depends_on("r-sp@1.4-0.1:", type=("build", "run"), when="@2.2-0:") depends_on("r-spatialreg", type=("build", "run")) depends_on("r-spacetime", type=("build", "run")) depends_on("r-spdep", type=("build", "run")) depends_on("r-fnn", type=("build", "run"), when="@2.1-1:") + depends_on("r-rcpp", type=("build", "run")) + depends_on("r-rcpp@1.0.12:", type=("build", "run"), when="@2.3-3:") depends_on("r-rcpparmadillo", type=("build", "run")) + depends_on("r-rcppeigen", type=("build", "run"), when="@2.3-3:") depends_on("gmake", type="build") + + depends_on("r-maptools@0.5-2:", type=("build", "run"), when="@:2.2") diff --git a/var/spack/repos/builtin/packages/r-hardhat/package.py b/var/spack/repos/builtin/packages/r-hardhat/package.py index 88330864e7..9966baaf3e 100644 --- a/var/spack/repos/builtin/packages/r-hardhat/package.py +++ b/var/spack/repos/builtin/packages/r-hardhat/package.py @@ -21,6 +21,7 @@ class RHardhat(RPackage): license("MIT") + version("1.4.0", sha256="46d023ddfc8f940cd889478fa91c42e894a0df58a10f3b6c0eb688a500b2b3ad") version("1.3.0", sha256="fe9ff009e2ba6dd4d70cbb541430f88d85c0a28d6a1c2772e4910c79b81fe82e") version("1.2.0", sha256="f9320eccb1b5f624a46fa074e3ccc202c383b77098ecd08b193aeb47daedad78") version("1.0.0", sha256="2740dc243a440e7d32370a78f9258255faea6d900075901cf6009c651769e7bd") diff --git a/var/spack/repos/builtin/packages/r-haven/package.py b/var/spack/repos/builtin/packages/r-haven/package.py index 220171dbce..8bd719fa2b 100644 --- a/var/spack/repos/builtin/packages/r-haven/package.py +++ b/var/spack/repos/builtin/packages/r-haven/package.py @@ -33,6 +33,7 @@ class RHaven(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.2:", type=("build", "run"), when="@2.1.1:") depends_on("r@3.4:", type=("build", "run"), when="@2.5.0:") + depends_on("r@3.6:", type=("build", "run"), when="@2.5.4:") depends_on("r-cli@3.0.0:", type=("build", "run"), when="@2.5.0:") depends_on("r-forcats@0.2.0:", type=("build", "run")) depends_on("r-hms", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-hdf5r/package.py b/var/spack/repos/builtin/packages/r-hdf5r/package.py index 259c32003b..257fb41bb7 100644 --- a/var/spack/repos/builtin/packages/r-hdf5r/package.py +++ b/var/spack/repos/builtin/packages/r-hdf5r/package.py @@ -20,6 +20,7 @@ class RHdf5r(RPackage): license("Apache-2.0 OR custom") + version("1.3.11", sha256="9795d667bc72acfabece1e3ece1aa4e60e8194cb4eb8b46985efccd19a55a8c4") version("1.3.8", sha256="b53281e2cf57447965849748e972de2f7fe8df0cee3538ef5813c33c7ed2302b") version("1.3.7", sha256="6e8a02843ed1c970cb41f97e2acee34853d3b70ce617bc9bcff07c41b98f295b") version("1.3.5", sha256="87b75173ab226a9fbaa5b28289349f3c56b638629560a172994b8f9323c1622f") diff --git a/var/spack/repos/builtin/packages/r-hh/package.py b/var/spack/repos/builtin/packages/r-hh/package.py index da38dfed21..9f8fc014c5 100644 --- a/var/spack/repos/builtin/packages/r-hh/package.py +++ b/var/spack/repos/builtin/packages/r-hh/package.py @@ -25,6 +25,7 @@ class RHh(RPackage): cran = "HH" + version("3.1-52", sha256="d5495e18df65de613d9bdc43729ca2ac27746b15b90c06502b2ee5e2458d0383") version("3.1-49", sha256="12cef0cb0a07c745026d925aee2970913e1f3f0705a58bc2741bf4940c80b87b") version("3.1-47", sha256="50910ac7de49122df56c6e42413535601c74bbef9240ad8977e3267273d087c0") version("3.1-43", sha256="2ed35c8fc97092e9d2ce3439a2ec342d5d7bd93ad8f5266995cc80d88cd2235b") diff --git a/var/spack/repos/builtin/packages/r-highr/package.py b/var/spack/repos/builtin/packages/r-highr/package.py index 7452077ba8..ea8d5febbd 100644 --- a/var/spack/repos/builtin/packages/r-highr/package.py +++ b/var/spack/repos/builtin/packages/r-highr/package.py @@ -17,6 +17,7 @@ class RHighr(RPackage): license("GPL-2.0-or-later") + version("0.11", sha256="e90d14284001963325a84a9dbeef029609d52515da8d65c87ae61be21b7fe0a7") version("0.10", sha256="ec55bc1ff66390ed66806dc2a7b6c17dbfd089b3d73fe2e369017f8cb4bc347b") version("0.9", sha256="beff11390d936c90fdcc00e7ed0eb72220f3de403a51b56659e3d3e0b6d8ed4d") version("0.8", sha256="4bd01fba995f68c947a99bdf9aca15327a5320151e10bd0326fad50a6d8bc657") diff --git a/var/spack/repos/builtin/packages/r-hmisc/package.py b/var/spack/repos/builtin/packages/r-hmisc/package.py index 2ea88f61d0..e2dc348b45 100644 --- a/var/spack/repos/builtin/packages/r-hmisc/package.py +++ b/var/spack/repos/builtin/packages/r-hmisc/package.py @@ -17,6 +17,7 @@ class RHmisc(RPackage): cran = "Hmisc" + version("5.1-3", sha256="3c61772ff7a78ca5855189faa810c74117dc5df240103adc6e90eb94e9c605eb") version("5.0-1", sha256="db390f8f8a150cb5cffb812e9609a8e8632ceae0dc198528f190fd670ba8fa59") version("4.7-1", sha256="325d571a68b2198eabd258a8d86143cac659ffa70e474088a18e9b58ab882e7f") version("4.7-0", sha256="29ec2d9ca11c790c350e93323126bef4f498c69c41c31bb335fd04671e0f87bd") @@ -26,6 +27,7 @@ class RHmisc(RPackage): version("4.2-0", sha256="9e9614673288dd00295f250fa0bf96fc9e9fed692c69bf97691081c1a01411d9") version("4.1-1", sha256="991db21cdf73ffbf5b0239a4876b2e76fd243ea33528afd88dc968792f281498") + depends_on("r@4.1.0:", type=("build", "run"), when="@5.1-2:") depends_on("r-formula", type=("build", "run")) depends_on("r-ggplot2@2.2:", type=("build", "run")) depends_on("r-cluster", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-hoardr/package.py b/var/spack/repos/builtin/packages/r-hoardr/package.py index 1002268151..dfeffebdd9 100644 --- a/var/spack/repos/builtin/packages/r-hoardr/package.py +++ b/var/spack/repos/builtin/packages/r-hoardr/package.py @@ -19,6 +19,7 @@ class RHoardr(RPackage): license("MIT") + version("0.5.4", sha256="4e031ac1317584451c09bc8288ed73fb2d6ceea3c10d29dbb4be08157e489a37") version("0.5.3", sha256="b9e4d1350e1fde7db922e55128306e3768ee46ff9532f05c96543dcae383647c") version("0.5.2", sha256="819113f0e25da105f120a676b5173872a4144f2f6f354cad14b35f898e76dc54") diff --git a/var/spack/repos/builtin/packages/r-htmltable/package.py b/var/spack/repos/builtin/packages/r-htmltable/package.py index e381c8773d..d6fc8d50c5 100644 --- a/var/spack/repos/builtin/packages/r-htmltable/package.py +++ b/var/spack/repos/builtin/packages/r-htmltable/package.py @@ -18,6 +18,7 @@ class RHtmltable(RPackage): cran = "htmlTable" + version("2.4.3", sha256="3739d01bff313ccd206b63940a8252b037f0521d041c721a4e0d195abd6ef6dd") version("2.4.1", sha256="3a7f3e75d886dc398fd1d3cae907b536fff6af3a3d2c18349ef12ec06d310f93") version("2.4.0", sha256="4ca2b5616d77cfeee8ae5ca74307b86407d478b12d1ce17ba9c447e233b89a9d") version("2.1.0", sha256="4049339b317cbec1c8c7930e2e36cf0fc8b002516092dd270bb794d8db02f0bf") @@ -25,6 +26,7 @@ class RHtmltable(RPackage): version("1.11.2", sha256="64a273b1cdf07a7c57b9031315ca665f95d78e70b4320d020f64a139278877d1") version("1.9", sha256="5b487a7f33af77db7d987bf61f3ef2ba18bb629fe7b9802409f8b3485c603132") + depends_on("r@4.1:", type=("build", "run"), when="@2.4.2:") depends_on("r-stringr", type=("build", "run")) depends_on("r-knitr@1.6:", type=("build", "run")) depends_on("r-magrittr@1.5:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-htmltools/package.py b/var/spack/repos/builtin/packages/r-htmltools/package.py index 8af75e17e4..643f2b00c2 100644 --- a/var/spack/repos/builtin/packages/r-htmltools/package.py +++ b/var/spack/repos/builtin/packages/r-htmltools/package.py @@ -15,6 +15,7 @@ class RHtmltools(RPackage): license("GPL-2.0-or-later") + version("0.5.8.1", sha256="f9f62293ec06c353c4584db6ccedb06a2da12e485208bd26b856f17dd013f176") version("0.5.5", sha256="c8b23fab855a89c6ed0f6d6c7cad0ff9c5ae329c0bdb479940443ee752f26659") version("0.5.3", sha256="2c451b369ea8918358e2b280f548816664fe0143222c609e6bfb1f9cd2f7324f") version("0.5.2", sha256="7dc7d50436e5a82a5801f85bcd2f572a06a98b4027d71aa17b4854ec9b2767fb") @@ -26,9 +27,10 @@ class RHtmltools(RPackage): depends_on("r@2.14.1:", type=("build", "run")) depends_on("r-digest", type=("build", "run")) depends_on("r-base64enc", type=("build", "run"), when="@0.5.1:") - depends_on("r-rlang@0.4.10:", type=("build", "run"), when="@0.5.2:") depends_on("r-rlang", type=("build", "run"), when="@0.5.1:") + depends_on("r-rlang@0.4.10:", type=("build", "run"), when="@0.5.2:") + depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@0.5.7:") depends_on("r-fastmap@1.1.0:", type=("build", "run"), when="@0.5.2:") - depends_on("r-ellipsis", type=("build", "run"), when="@0.5.5:") + depends_on("r-ellipsis", type=("build", "run"), when="@0.5.5:0.5.7") depends_on("r-rcpp", type=("build", "run"), when="@:0.3.6") diff --git a/var/spack/repos/builtin/packages/r-htmlwidgets/package.py b/var/spack/repos/builtin/packages/r-htmlwidgets/package.py index 95e0cbd21c..f7b0a0c38e 100644 --- a/var/spack/repos/builtin/packages/r-htmlwidgets/package.py +++ b/var/spack/repos/builtin/packages/r-htmlwidgets/package.py @@ -17,6 +17,7 @@ class RHtmlwidgets(RPackage): license("MIT") + version("1.6.4", sha256="7cb08f0b30485dac26f72e4056ec4ed8825d1398e8b9f25ed63db228fe3a0ed0") version("1.6.2", sha256="7fda1672a4c0fbc203c790677b6ee7c40d2c2d72be4f6772f75288fc712b10bc") version("1.5.4", sha256="1a3fc60f40717de7f1716b754fd1c31a132e489a2560a278636ee78eba46ffc1") version("1.5.3", sha256="01a5833182cc224bd100be2815e57e67b524de9f2bb1542787b6e3d1303f0f29") @@ -27,6 +28,7 @@ class RHtmlwidgets(RPackage): depends_on("r-htmltools@0.3:", type=("build", "run")) depends_on("r-htmltools@0.5.4:", type=("build", "run"), when="@1.6.2:") + depends_on("r-htmltools@0.5.7:", type=("build", "run"), when="@1.6.3:") depends_on("r-jsonlite@0.9.16:", type=("build", "run")) depends_on("r-yaml", type=("build", "run")) depends_on("r-rmarkdown", type=("build", "run"), when="@1.6.2:") diff --git a/var/spack/repos/builtin/packages/r-httpuv/package.py b/var/spack/repos/builtin/packages/r-httpuv/package.py index e54167e7d6..8801ddadc3 100644 --- a/var/spack/repos/builtin/packages/r-httpuv/package.py +++ b/var/spack/repos/builtin/packages/r-httpuv/package.py @@ -21,6 +21,7 @@ class RHttpuv(RPackage): license("GPL-2.0-or-later OR custom") + version("1.6.15", sha256="5e6ded3623a39df3e1db6cb7e7292b4c03c80b3c6c5faaac3b78b711cb205ed0") version("1.6.9", sha256="8d77f25b22fa7473b45007c2048e9a38d3792d59b2716e1fcdf9e99bd585d95d") version("1.6.6", sha256="41395fd324c5cb884d4f2a8060744758904119db22eeb312f2ea1e7ad7711293") version("1.6.5", sha256="f5f63629ca5e9d0e396a89982d95b5286726c0cb425166f35a3ad32a60a79156") diff --git a/var/spack/repos/builtin/packages/r-httr/package.py b/var/spack/repos/builtin/packages/r-httr/package.py index 028903fd0c..a66b9a2c55 100644 --- a/var/spack/repos/builtin/packages/r-httr/package.py +++ b/var/spack/repos/builtin/packages/r-httr/package.py @@ -17,6 +17,7 @@ class RHttr(RPackage): license("MIT") + version("1.4.7", sha256="1555e6c2fb67bd38ff11b479f74aa287b2d93f4add487aec53b836ff07de3a3a") version("1.4.5", sha256="f93bac7f882b0df099abca47dd5aae3686fb3cd2d3e9926fcd639bcddff76f6c") version("1.4.4", sha256="41d82523f3ee260d409a7b5ae4136190cbc5aecbc270b40ed7064f83e7f5435d") version("1.4.3", sha256="9a8613fa96173ac910c021391af1ced4d0609169049c802cf7cdfe1c40897c6a") @@ -32,6 +33,7 @@ class RHttr(RPackage): depends_on("r@3.2:", type=("build", "run"), when="@1.4.1:") depends_on("r@3.5:", type=("build", "run"), when="@1.4.5:") depends_on("r-curl@3.0.0:", type=("build", "run")) + depends_on("r-curl@5.0.2:", type=("build", "run"), when="@1.4.7:") depends_on("r-jsonlite", type=("build", "run")) depends_on("r-mime", type=("build", "run")) depends_on("r-openssl@0.8:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-httr2/package.py b/var/spack/repos/builtin/packages/r-httr2/package.py index 4ca63c8d50..29f21c022c 100644 --- a/var/spack/repos/builtin/packages/r-httr2/package.py +++ b/var/spack/repos/builtin/packages/r-httr2/package.py @@ -18,15 +18,21 @@ class RHttr2(RPackage): license("MIT") + version("1.0.2", sha256="d1f8e37f74a59f4e1b3b886e5f453336ba14251e500acdccc8f4f7d2b9300048") version("0.2.2", sha256="5d1ab62541f7817112519f0f9d00d6a2555bab5b2da7f5c6d579b0c307d7f2bf") depends_on("r@3.4:", type=("build", "run")) + depends_on("r@4.0:", type=("build", "run"), when="@1.0.2:") depends_on("r-cli@3.0.0:", type=("build", "run")) depends_on("r-curl", type=("build", "run")) + depends_on("r-curl@5.1.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-glue", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@1.0.0:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-openssl", type=("build", "run")) depends_on("r-r6", type=("build", "run")) depends_on("r-rappdirs", type=("build", "run")) depends_on("r-rlang@1.0.0:", type=("build", "run")) + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.0.0:") + depends_on("r-vctrs@0.6.3:", type=("build", "run"), when="@1.0.0:") depends_on("r-withr", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-hydrogof/package.py b/var/spack/repos/builtin/packages/r-hydrogof/package.py index 3f5f11b161..de6840e4a4 100644 --- a/var/spack/repos/builtin/packages/r-hydrogof/package.py +++ b/var/spack/repos/builtin/packages/r-hydrogof/package.py @@ -19,6 +19,7 @@ class RHydrogof(RPackage): cran = "hydroGOF" + version("0.6-0", sha256="fb1839da5d6c2d0bbff961b4bb39d149b487b59dc36017aada9d3484a842269e") version("0.4-0", sha256="6a109740e36549a9369b5960b869e5e0a296261df7b6faba6cb3bd338d59883b") depends_on("r@2.10.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-hydrotsm/package.py b/var/spack/repos/builtin/packages/r-hydrotsm/package.py index 2fd5cde5e9..5cfc85af6c 100644 --- a/var/spack/repos/builtin/packages/r-hydrotsm/package.py +++ b/var/spack/repos/builtin/packages/r-hydrotsm/package.py @@ -22,14 +22,18 @@ class RHydrotsm(RPackage): cran = "hydroTSM" + version("0.7-0", sha256="a6e1f0f74a5b8f3a7c05d020739342278b0a54e7b63a66a755db5599ebf94a8e") version("0.6-0", sha256="5be759845ce05ca579ed2657c85d497b78c3060d737e84fcd457153045db4ad7") depends_on("r@2.10.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@0.7-0:") depends_on("r-zoo@1.7-2:", type=("build", "run")) depends_on("r-xts@0.9-7:", type=("build", "run")) depends_on("r-e1071", type=("build", "run")) - depends_on("r-gstat", type=("build", "run")) - depends_on("r-automap", type=("build", "run")) - depends_on("r-sp@1.1-0:", type=("build", "run")) depends_on("r-lattice", type=("build", "run")) - depends_on("r-maptools", type=("build", "run")) + depends_on("r-classint", type=("build", "run"), when="@0.7-0:") + + depends_on("r-gstat", type=("build", "run"), when="@:0.6.0") + depends_on("r-automap", type=("build", "run"), when="@:0.6.0") + depends_on("r-sp@1.1-0:", type=("build", "run"), when="@:0.6.0") + depends_on("r-maptools", type=("build", "run"), when="@:0.6.0") diff --git a/var/spack/repos/builtin/packages/r-igraph/package.py b/var/spack/repos/builtin/packages/r-igraph/package.py index dba6d2beab..cb89fe650b 100644 --- a/var/spack/repos/builtin/packages/r-igraph/package.py +++ b/var/spack/repos/builtin/packages/r-igraph/package.py @@ -17,6 +17,7 @@ class RIgraph(RPackage): license("GPL-2.0-or-later") + version("2.0.3", sha256="8e8a172d4567219474562cfb1085496be3ab356483c4e88011aca1fc3b2d8f76") version("1.4.2", sha256="7d5300adb1a25a6470cada8630e35ef416181147ab624d5a0a8d3552048c4ae5") version("1.3.5", sha256="9e615d67b6b5b57dfa54ec2bbc8c29da8f7c3fe82af1e35ab27273b1035b9bd4") version("1.3.1", sha256="505a2ba7c417ceaf869240cc1c9a5f3fbd75f8d9dfcfe048df1326c6ec41144e") @@ -28,12 +29,18 @@ class RIgraph(RPackage): version("1.0.1", sha256="dc64ed09b8b5f8d66ed4936cde3491974d6bc5178dd259b6eab7ef3936aa5602") depends_on("r@3.0.2:", type=("build", "run"), when="@1.4.2:") + depends_on("r@3.5.0:", type=("build", "run"), when="@1.5.0:") + depends_on("r-cli", type=("build", "run"), when="@1.5.0:") + depends_on("r-cpp11@0.2.0:", type=("build", "run"), when="@1.4.2:") + depends_on("r-cpp11@0.4.7:", type=("build", "run"), when="@1.6.0:") + depends_on("r-lifecycle", type=("build", "run"), when="@1.5.0.1:") + depends_on("r-vctrs", type=("build", "run"), when="@2.0.3:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) depends_on("r-pkgconfig@2.0.0:", type=("build", "run")) depends_on("r-rlang", type=("build", "run"), when="@1.3.5:") - depends_on("r-cpp11@0.2.0:", type=("build", "run"), when="@1.4.2:") + depends_on("r-vctrs", type=("build", "run"), when="@2.0.2:") depends_on("gmp") depends_on("gmp@4.38:", when="@1.2.11:") depends_on("libxml2") diff --git a/var/spack/repos/builtin/packages/r-imager/package.py b/var/spack/repos/builtin/packages/r-imager/package.py index b132cfee0f..6b36e21629 100644 --- a/var/spack/repos/builtin/packages/r-imager/package.py +++ b/var/spack/repos/builtin/packages/r-imager/package.py @@ -20,6 +20,7 @@ class RImager(RPackage): license("LGPL-3.0-only") + version("1.0.2", sha256="7c849086cb17d6c5aefc106217363e14afbcda2a9e0120687d40805b5e1c566a") version("0.42.19", sha256="187abccba648ecece5e466ca6333acd5c8fdd1476daa2d04d5fa9ec5400ae1e2") version("0.42.13", sha256="d90a9893d11190ba249c7fae5bd6517a77907efbce2941452cb2aec57bb5cf7f") version("0.42.11", sha256="47f8b7ff8d05a5191e30ad1869f12a62bdbe3142b22b12a6032dec9b5f8532a8") @@ -29,8 +30,10 @@ class RImager(RPackage): depends_on("r+X") depends_on("r@2.10.0:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-rcpp@0.11.5:", type=("build", "run")) + depends_on("r-rcpp@1.0.0:", type=("build", "run"), when="@1.0.1:") depends_on("r-stringr", type=("build", "run")) depends_on("r-png", type=("build", "run")) depends_on("r-jpeg", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-influencer/package.py b/var/spack/repos/builtin/packages/r-influencer/package.py index e3e60fa1df..b26eeb2e58 100644 --- a/var/spack/repos/builtin/packages/r-influencer/package.py +++ b/var/spack/repos/builtin/packages/r-influencer/package.py @@ -20,6 +20,7 @@ class RInfluencer(RPackage): cran = "influenceR" + version("0.1.5", sha256="8164e4820f769032fab97c9ca486d33e83309641fcc4875065d8f5a43b20f58c") version("0.1.0.1", sha256="63c46f1175fced33fb1b78d4d56e37fbee09b408945b0106dac36e3344cd4766") version("0.1.0", sha256="4fc9324179bd8896875fc0e879a8a96b9ef2a6cf42a296c3b7b4d9098519e98a") diff --git a/var/spack/repos/builtin/packages/r-inline/package.py b/var/spack/repos/builtin/packages/r-inline/package.py index d7601ea0a0..0ac66b8e79 100644 --- a/var/spack/repos/builtin/packages/r-inline/package.py +++ b/var/spack/repos/builtin/packages/r-inline/package.py @@ -20,3 +20,5 @@ class RInline(RPackage): version("0.3.17", sha256="792857b2ebd408d6523424d2f6bb7297e241d4b28ab32372f6a9240c8cd554f3") version("0.3.15", sha256="ff043fe13c1991a3b285bed256ff4a9c0ba10bee764225a34b285875b7d69c68") version("0.3.14", sha256="fd34d6bf965148d26d983a022a0ff7bc1a5831f6ca066deee3f6139894dfc931") + + depends_on("r@2.4.0:", when="@0.3.16:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-insight/package.py b/var/spack/repos/builtin/packages/r-insight/package.py index 2f9f27c8de..23b0ce7276 100644 --- a/var/spack/repos/builtin/packages/r-insight/package.py +++ b/var/spack/repos/builtin/packages/r-insight/package.py @@ -23,6 +23,7 @@ class RInsight(RPackage): license("GPL-3.0-only") + version("0.20.3", sha256="b60e189849cd3c368e9c2b2174e89c2dfbba3b34e84feb8a20af1bb758116bb2") version("0.19.1", sha256="1042629644c66b1a372fd4471d38adccc0c3a329879ef685b14b65575c1c98eb") version("0.18.6", sha256="ab0dc3c8ec765f2e93f7bcc3a7abb05140f71db24d50bf8cdd595a5a4e771cae") version("0.18.4", sha256="6e3f378bc2eb30c0300103bdd8a3e74371199b36867b45978ec9690a6fda0c5f") @@ -33,3 +34,4 @@ class RInsight(RPackage): depends_on("r@3.4:", type=("build", "run")) depends_on("r@3.5:", type=("build", "run"), when="@0.18.4:") + depends_on("r@3.6:", type=("build", "run"), when="@0.19.2:") diff --git a/var/spack/repos/builtin/packages/r-interp/package.py b/var/spack/repos/builtin/packages/r-interp/package.py index 800ecaf9a5..e7df13df3b 100644 --- a/var/spack/repos/builtin/packages/r-interp/package.py +++ b/var/spack/repos/builtin/packages/r-interp/package.py @@ -32,6 +32,7 @@ class RInterp(RPackage): license("GPL-2.0-or-later") + version("1.1-6", sha256="3674044e5334ecdf124054303929c084fc0797d3123e28576a230492ea6ecd34") version("1.1-4", sha256="4f7b5d388132a4d76e8635e2a7c4fa0d705df2b49e7d108faa16ce2236e34d06") version("1.1-3", sha256="b74e606b38cfb02985c1f9e3e45093620f76c0307b1b0b4058761e871eb5fa3f") diff --git a/var/spack/repos/builtin/packages/r-intervals/package.py b/var/spack/repos/builtin/packages/r-intervals/package.py index 60006c590a..39f6181ad5 100644 --- a/var/spack/repos/builtin/packages/r-intervals/package.py +++ b/var/spack/repos/builtin/packages/r-intervals/package.py @@ -13,6 +13,7 @@ class RIntervals(RPackage): license("Artistic-2.0") + version("0.15.4", sha256="50c0e1e3aab3e7b72cc1f0a6559d96caa3a360e969c38538479907e6cbe39f8f") version("0.15.3", sha256="8501fef7c74b9be874e807839518aae85e79bf4a047cd52169b52c6d9b41dfc4") version("0.15.2", sha256="0bd23b0ce817ddd851238233d8a5420bf3a6d29e75fd361418cbc50118777c57") version("0.15.1", sha256="9a8b3854300f2055e1492c71932cc808b02feac8c4d3dbf6cba1c7dbd09f4ae4") diff --git a/var/spack/repos/builtin/packages/r-ipred/package.py b/var/spack/repos/builtin/packages/r-ipred/package.py index b072115855..fe127d79a7 100644 --- a/var/spack/repos/builtin/packages/r-ipred/package.py +++ b/var/spack/repos/builtin/packages/r-ipred/package.py @@ -17,6 +17,7 @@ class RIpred(RPackage): license("GPL-2.0-or-later") + version("0.9-15", sha256="a4752de11121262f3f4c43163efa34e05e42cdf4f8496d8897be6f410dc0ee4b") version("0.9-14", sha256="81c83dc847d09c3db52ef15e36cd4dac38c50eead1008ddd458b9e89d7528f35") version("0.9-13", sha256="6168a062d93c2d3063c064a8f242cd3716dee99822e20363a1801261319c4c98") version("0.9-12", sha256="d6e1535704d39415a799d7643141ffa4f6f55597f03e763f4ccd5d8106005843") diff --git a/var/spack/repos/builtin/packages/r-iso/package.py b/var/spack/repos/builtin/packages/r-iso/package.py index 4f8ec037d0..1eb77a2695 100644 --- a/var/spack/repos/builtin/packages/r-iso/package.py +++ b/var/spack/repos/builtin/packages/r-iso/package.py @@ -14,6 +14,7 @@ class RIso(RPackage): cran = "Iso" + version("0.0-21", sha256="b6842ae1c7b629ebb63355f50bb2e5d96e5696fa59590807ac6028b6dce28fa6") version("0.0-18.1", sha256="2fa5f78a7603cbae94a5e38e791938596a053d48c609a7c120a19cbb7d93c66f") version("0.0-18", sha256="2d7e8c4452653364ee086d95cea620c50378e30acfcff129b7261e1756a99504") version("0.0-17", sha256="c007d6eaf6335a15c1912b0804276ff39abce27b7a61539a91b8fda653629252") diff --git a/var/spack/repos/builtin/packages/r-jade/package.py b/var/spack/repos/builtin/packages/r-jade/package.py index 3047b0916d..5ffd0424b2 100644 --- a/var/spack/repos/builtin/packages/r-jade/package.py +++ b/var/spack/repos/builtin/packages/r-jade/package.py @@ -18,6 +18,7 @@ class RJade(RPackage): cran = "JADE" + version("2.0-4", sha256="d4b3d65a33cae454d3ab13343bceabfb3f6b8004ac64ae7bd86dee92a1cd2055") version("2.0-3", sha256="56d68a993fa16fc6dec758c843960eee840814c4ca2271e97681a9d2b9e242ba") depends_on("r-clue", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-kableextra/package.py b/var/spack/repos/builtin/packages/r-kableextra/package.py index 38ae8c03eb..16da516e32 100644 --- a/var/spack/repos/builtin/packages/r-kableextra/package.py +++ b/var/spack/repos/builtin/packages/r-kableextra/package.py @@ -18,20 +18,23 @@ class RKableextra(RPackage): cran = "kableExtra" + version("1.4.0", sha256="8fe2cc9fc2e8991685c4dc9e4904459e6f572c945319befde36d76f3ab527409") version("1.3.4", sha256="091ffac282cf9257edcec1a06da38b5e6516f111296bedb934e32f5692ffbbb0") depends_on("r@3.1.0:", type=("build", "run")) depends_on("r-knitr@1.16:", type=("build", "run")) + depends_on("r-knitr@1.33:", type=("build", "run"), when="@1.4.0:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-stringr@1.0:", type=("build", "run")) depends_on("r-xml2@1.1.1:", type=("build", "run")) - depends_on("r-rvest", type=("build", "run")) depends_on("r-rmarkdown@1.6.0:", type=("build", "run")) depends_on("r-scales", type=("build", "run")) depends_on("r-viridislite", type=("build", "run")) depends_on("r-htmltools", type=("build", "run")) depends_on("r-rstudioapi", type=("build", "run")) - depends_on("r-glue", type=("build", "run")) - depends_on("r-webshot", type=("build", "run")) depends_on("r-digest", type=("build", "run")) depends_on("r-svglite", type=("build", "run")) + + depends_on("r-rvest", type=("build", "run"), when="@:1.3.4") + depends_on("r-glue", type=("build", "run"), when="@:1.3.4") + depends_on("r-webshot", type=("build", "run"), when="@:1.3.4") diff --git a/var/spack/repos/builtin/packages/r-kernlab/package.py b/var/spack/repos/builtin/packages/r-kernlab/package.py index 7e1289948d..858ef588e5 100644 --- a/var/spack/repos/builtin/packages/r-kernlab/package.py +++ b/var/spack/repos/builtin/packages/r-kernlab/package.py @@ -18,6 +18,7 @@ class RKernlab(RPackage): license("GPL-2.0-only") + version("0.9-33", sha256="70c0787d6d3762c89bb68218fbee19e861fcb5d4c05b787a9692055d95dd3061") version("0.9-32", sha256="654ef34e343deb4d2c4c139a44e5397d6e38876088ce1c53c7deb087935d6fdc") version("0.9-31", sha256="7359c665c1c5e6780e1ce44b143347c8eec839301c3079d7f19e29159873278a") version("0.9-30", sha256="48fc3a839ae57e8ab6ec26a34093ca3306391e7b271bef6e69812e2b4859ee81") diff --git a/var/spack/repos/builtin/packages/r-kernsmooth/package.py b/var/spack/repos/builtin/packages/r-kernsmooth/package.py index 2c19b6b76b..9977170c76 100644 --- a/var/spack/repos/builtin/packages/r-kernsmooth/package.py +++ b/var/spack/repos/builtin/packages/r-kernsmooth/package.py @@ -14,6 +14,7 @@ class RKernsmooth(RPackage): cran = "KernSmooth" + version("2.23-24", sha256="d0b3ec39547ffd92565e91b0c3bb637f3b30e7a46afe416d8790b8c4f528ac5f") version("2.23-20", sha256="20eb75051e2473933d41eedc9945b03c632847fd581e2207d452cf317fa5ec39") version("2.23-18", sha256="8334800c5ad2305539d2731b929ea34f50fa4269ba87277b699fd5be5b03c490") version("2.23-15", sha256="8b72d23ed121a54af188b2cda4441e3ce2646359309885f6455b82c0275210f6") diff --git a/var/spack/repos/builtin/packages/r-klar/package.py b/var/spack/repos/builtin/packages/r-klar/package.py index bef15e27e1..b3bc4308d6 100644 --- a/var/spack/repos/builtin/packages/r-klar/package.py +++ b/var/spack/repos/builtin/packages/r-klar/package.py @@ -20,6 +20,7 @@ class RKlar(RPackage): cran = "klaR" + version("1.7-3", sha256="d36c041c017cdb5ba3dbf7fb61d5ce3908d8e780eb2912fc99471394fcb8e3e5") version("1.7-2", sha256="8035c3edb8257973184ad5a2109fc7c77c32da913cb9dd0c2f1c373e6fccbd61") version("1.7-1", sha256="0354bafb1a202bc439660ecfcfe78359bc2881a69d15ff64afa049e4eb171d25") version("1.7-0", sha256="b4795250ef19fd1b5e1b9a59343fd01159a33dbdbb504a06258220e37a718198") diff --git a/var/spack/repos/builtin/packages/r-knitr/package.py b/var/spack/repos/builtin/packages/r-knitr/package.py index 08e5dd22e4..0a605579aa 100644 --- a/var/spack/repos/builtin/packages/r-knitr/package.py +++ b/var/spack/repos/builtin/packages/r-knitr/package.py @@ -17,6 +17,7 @@ class RKnitr(RPackage): license("GPL-2.0-or-later") + version("1.48", sha256="501b5926da7da1e8df61958639537e4c30110a0a8de07381afd92b31b9bff197") version("1.42", sha256="9344f1a0089e4da101def54aee38d7cfe3b2022d75c560141d8cc22ac65130f3") version("1.40", sha256="9b8f95ff367a0e52f024bda30315ec7cdd6a5b82371a1aaed95ab4eea78535bc") version("1.39", sha256="c91a65edebdca779af7f7480fa6636667497c9291ad55d6efd982db0bb91ac72") @@ -38,6 +39,7 @@ class RKnitr(RPackage): depends_on("r-evaluate@0.10:", type=("build", "run")) depends_on("r-evaluate@0.15:", type=("build", "run"), when="@1.39:") depends_on("r-highr", type=("build", "run")) + depends_on("r-highr@0.11:", type=("build", "run"), when="@1.47:") depends_on("r-yaml@2.1.19:", type=("build", "run")) depends_on("r-xfun", type=("build", "run"), when="@1.23:") depends_on("r-xfun@0.15:", type=("build", "run"), when="@1.30") @@ -46,6 +48,9 @@ class RKnitr(RPackage): depends_on("r-xfun@0.27:", type=("build", "run"), when="@1.37:") depends_on("r-xfun@0.29:", type=("build", "run"), when="@1.39:") depends_on("r-xfun@0.34:", type=("build", "run"), when="@1.42:") + depends_on("r-xfun@0.39:", type=("build", "run"), when="@1.43:") + depends_on("r-xfun@0.43:", type=("build", "run"), when="@1.46:") + depends_on("r-xfun@0.44:", type=("build", "run"), when="@1.47:") depends_on("pandoc", type="build") depends_on("py-rst2pdf", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ks/package.py b/var/spack/repos/builtin/packages/r-ks/package.py index 9ef0ad456f..9db06ce08d 100644 --- a/var/spack/repos/builtin/packages/r-ks/package.py +++ b/var/spack/repos/builtin/packages/r-ks/package.py @@ -18,6 +18,7 @@ class RKs(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.14.2", sha256="f19130476cfafec26bba102b66ecbaeb80a9312c62d55eeec54d1aec75803fcb") version("1.14.0", sha256="2db9c56b7b0217b324bbf1e0f66bb94d3f7067a75c5823cbc7d369d63bbb4391") version("1.13.5", sha256="d1c4d06d704f301628455787ba929add1e774debc343d0952a768abea6cc7815") version("1.13.3", sha256="defb80df665d987f1751899f7a9809cb5a770f3c74266d7fbc7b9493616dce73") @@ -36,5 +37,6 @@ class RKs(RPackage): depends_on("r-mgcv", type=("build", "run")) depends_on("r-multicool", type=("build", "run")) depends_on("r-mvtnorm@1.0-0:", type=("build", "run")) - depends_on("r-plot3d", type=("build", "run"), when="@1.13.3:") depends_on("r-pracma", type=("build", "run"), when="@1.13.3:") + + depends_on("r-plot3d", type=("build", "run"), when="@1.13.3:1.14.1") diff --git a/var/spack/repos/builtin/packages/r-ksamples/package.py b/var/spack/repos/builtin/packages/r-ksamples/package.py index fc0bb71af3..b9363d0530 100644 --- a/var/spack/repos/builtin/packages/r-ksamples/package.py +++ b/var/spack/repos/builtin/packages/r-ksamples/package.py @@ -24,6 +24,7 @@ class RKsamples(RPackage): cran = "kSamples" + version("1.2-10", sha256="2d66cc0511fb1be3190c5a285dcd93d02419468ee1ff5ae6d0838f16df2b578d") version("1.2-9", sha256="ba3ec4af3dfcf7cf12f0b784ef67bfea565e16985647ead904629886cc1542ff") depends_on("r-suppdists", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-labeling/package.py b/var/spack/repos/builtin/packages/r-labeling/package.py index cafeae8961..62202903af 100644 --- a/var/spack/repos/builtin/packages/r-labeling/package.py +++ b/var/spack/repos/builtin/packages/r-labeling/package.py @@ -15,5 +15,6 @@ class RLabeling(RPackage): license("MIT OR custom") + version("0.4.3", sha256="c62f4fc2cc74377d7055903c5f1913b7295f7587456fe468592738a483e264f2") version("0.4.2", sha256="e022d79276173e0d62bf9e37d7574db65ab439eb2ae1833e460b1cff529bd165") version("0.3", sha256="0d8069eb48e91f6f6d6a9148f4e2dc5026cabead15dd15fc343eff9cf33f538f") diff --git a/var/spack/repos/builtin/packages/r-labelled/package.py b/var/spack/repos/builtin/packages/r-labelled/package.py index 7d3e5d8526..755ff749c6 100644 --- a/var/spack/repos/builtin/packages/r-labelled/package.py +++ b/var/spack/repos/builtin/packages/r-labelled/package.py @@ -18,6 +18,7 @@ class RLabelled(RPackage): license("GPL-3.0-or-later") + version("2.13.0", sha256="9e2e82a42343b62f8a476d4dd7b13e9ffb3ee2c4e23bdf2cd29ef25b3dffa237") version("2.11.0", sha256="eddc5299ca448ea9c244960af65b95f4164495febd609f719e0f453598a0e5dd") version("2.10.0", sha256="5e93e29dcbbf0f6273b502b744695426e238ffe106f1db2bb5daeb1f17c9c40a") version("2.9.1", sha256="9eb10b245f64f3fb7346121aa4cd98638946e1cc4208dd5e28791ef8fd62fa40") @@ -34,5 +35,6 @@ class RLabelled(RPackage): depends_on("r-vctrs", type=("build", "run")) depends_on("r-stringr", type=("build", "run"), when="@2.9.0:") depends_on("r-tidyr", type=("build", "run")) + depends_on("r-tidyselect", type=("build", "run"), when="@2.13.0:") depends_on("r-pillar", type=("build", "run"), when="@:2.7.0") diff --git a/var/spack/repos/builtin/packages/r-later/package.py b/var/spack/repos/builtin/packages/r-later/package.py index 78f29762a9..0093ebf261 100644 --- a/var/spack/repos/builtin/packages/r-later/package.py +++ b/var/spack/repos/builtin/packages/r-later/package.py @@ -16,6 +16,7 @@ class RLater(RPackage): license("MIT") + version("1.3.2", sha256="52f5073d33cd0d3c12e56526c9c53c323ebafcc79b22cc6e51fb0c41ee2b561e") version("1.3.0", sha256="08f50882ca3cfd2bb68c83f1fcfbc8f696f5cfb5a42c1448c051540693789829") version("1.1.0.1", sha256="71baa7beae774a35a117e01d7b95698511c3cdc5eea36e29732ff1fe8f1436cd") version("0.8.0", sha256="6b2a28b43c619b2c7890840c62145cd3a34a7ed65b31207fdedde52efb00e521") diff --git a/var/spack/repos/builtin/packages/r-lattice/package.py b/var/spack/repos/builtin/packages/r-lattice/package.py index 78c7afeb11..ed00c72206 100644 --- a/var/spack/repos/builtin/packages/r-lattice/package.py +++ b/var/spack/repos/builtin/packages/r-lattice/package.py @@ -18,6 +18,7 @@ class RLattice(RPackage): license("GPL-2.0-or-later") + version("0.22-6", sha256="4b377211e472ece7872b9d6759f9b9c660b09594500462eb6146312a1d4d00f7") version("0.21-8", sha256="8ad3d6974262e6cab6cc8fec38aa279b5b2f2524adf6f3eab56f68302b60c329") version("0.20-45", sha256="22388d92bdb7d3959da84d7308d9026dd8226ef07580783729e8ad2f7d7507ad") version("0.20-44", sha256="57b908e3c7ada08a38ad857ee44f44fdf9cfa59d5d9500bda2ccc9c7e96cdb9b") diff --git a/var/spack/repos/builtin/packages/r-lava/package.py b/var/spack/repos/builtin/packages/r-lava/package.py index 25c4232c2b..e6488a566d 100644 --- a/var/spack/repos/builtin/packages/r-lava/package.py +++ b/var/spack/repos/builtin/packages/r-lava/package.py @@ -23,6 +23,7 @@ class RLava(RPackage): license("GPL-3.0-only") + version("1.8.0", sha256="8db996eeca012c58736f2d3b97f569c03e9361e20f31513c090a9386eb87e87f") version("1.7.2.1", sha256="d42b1f5c7e4e76718e4f014c44608295f82b5de0eb25ce8e9b35c40c7839ef2e") version("1.7.0", sha256="3078da69f3828812bcd093acc2d1cd2c8cbc8480d81da222ae49a55bcb2e5e24") version("1.6.10", sha256="7a88f8a885872e2abb3011c446e9e1c4884cd4dbe6ab4cfe9207538e5560232e") @@ -32,6 +33,7 @@ class RLava(RPackage): version("1.4.7", sha256="d5cbd4835a94855478efb93051eece965db116ead203f4dd4e09d9a12d52f4bf") depends_on("r@3.0:", type=("build", "run")) + depends_on("r-cli", type=("build", "run"), when="@1.7.4:") depends_on("r-future-apply", type=("build", "run"), when="@1.6.10:") depends_on("r-progressr", type=("build", "run"), when="@1.6.10:") depends_on("r-numderiv", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-lavaan/package.py b/var/spack/repos/builtin/packages/r-lavaan/package.py index a1361283d1..abd18dcc20 100644 --- a/var/spack/repos/builtin/packages/r-lavaan/package.py +++ b/var/spack/repos/builtin/packages/r-lavaan/package.py @@ -16,6 +16,7 @@ class RLavaan(RPackage): license("GPL-2.0-or-later") + version("0.6-18", sha256="b907cacd6c4a2320138cb2206f17b60acf077453540bcb9cc94659fc9a48df51") version("0.6-15", sha256="9a43f3e999f9b3003a8c46a615902e01d6701d28a871d657751dd2ff3928ed9b") version("0.6-12", sha256="8048273e4102f8355ba123c8aff94a9e5a8e9ac9e02a73e986b106ceed4d079e") version("0.6-11", sha256="2cc193b82463a865cd8dadb7332409fdebf47e4035d5fe8dbf3414a7ae18d308") diff --git a/var/spack/repos/builtin/packages/r-leafem/package.py b/var/spack/repos/builtin/packages/r-leafem/package.py index 6a1ebaa35f..22feaf3df6 100644 --- a/var/spack/repos/builtin/packages/r-leafem/package.py +++ b/var/spack/repos/builtin/packages/r-leafem/package.py @@ -20,6 +20,7 @@ class RLeafem(RPackage): license("MIT") + version("0.2.3", sha256="defd5baa4383da4182e97d41145c7a9633a987de05c465eb99a7a452fbf375e3") version("0.2.0", sha256="97eb78b3eaf6012940f2c4f73effd8ff2d39aa46fef5f2ddf0005990b07dba8d") version("0.1.6", sha256="ca50e0a699f564449248511857a2df0d48cd07de3157e099478a19b533088156") version("0.1.3", sha256="6f123fc15efadb85d317c01003e3b7af5dc925cffe0bbe774b1b39b6bd67f304") diff --git a/var/spack/repos/builtin/packages/r-leaflet-providers/package.py b/var/spack/repos/builtin/packages/r-leaflet-providers/package.py index 6d3f39a792..725c0e21a1 100644 --- a/var/spack/repos/builtin/packages/r-leaflet-providers/package.py +++ b/var/spack/repos/builtin/packages/r-leaflet-providers/package.py @@ -18,6 +18,9 @@ class RLeafletProviders(RPackage): license("BSD-2-Clause") + version("2.0.0", sha256="c5ceeadc8088c9840a8249f0347501cdba0119be97219a01ea2050d1dd4a8666") version("1.9.0", sha256="9e8fc75c83313ab24663c2e718135459599549ed6e7396086cacb44e36cfd67b") depends_on("r@2.10:", type=("build", "run")) + + depends_on("r-htmltools", type=("build", "run"), when="@2.0.0:") diff --git a/var/spack/repos/builtin/packages/r-leaflet/package.py b/var/spack/repos/builtin/packages/r-leaflet/package.py index 7b17cf605c..2697b1eb83 100644 --- a/var/spack/repos/builtin/packages/r-leaflet/package.py +++ b/var/spack/repos/builtin/packages/r-leaflet/package.py @@ -17,6 +17,7 @@ class RLeaflet(RPackage): license("GPL-3.0-only") + version("2.2.2", sha256="d2877b8d394116cc648456a828c5b825728be6a7afbbb3d55cc142c91a1ab8eb") version("2.1.2", sha256="26d8671e8c99d85a4c257d8fb8c07ba899a2b95f801652598578f5cc5c724039") version("2.1.1", sha256="32f6a043759a0d2d98ea05739b7b4c55a266aa01272e48243e3c44046c7a5677") version("2.0.4.1", sha256="b0f038295f1de5d32d9ffa1d0dbc1562320190f2f1365f3a5e95863fff88901f") @@ -25,17 +26,23 @@ class RLeaflet(RPackage): version("1.0.1", sha256="f25a8e10c9616ccb5504bb874c533bc44fb7e438e073d4fe4484dee0951a9bc3") depends_on("r@3.1.0:", type=("build", "run")) - depends_on("r-base64enc", type=("build", "run")) depends_on("r-crosstalk", type=("build", "run"), when="@2.0.0:") depends_on("r-htmlwidgets", type=("build", "run")) depends_on("r-htmlwidgets@1.5.4:", type=("build", "run"), when="@2.1.1:") depends_on("r-htmltools", type=("build", "run")) + depends_on("r-jquerylib", type=("build", "run"), when="@2.2.0:") + depends_on("r-leaflet-providers@1.8.0:", type=("build", "run"), when="@2.0.4.1:") + depends_on("r-leaflet-providers@2.0.0:", type=("build", "run"), when="@2.2.0:") depends_on("r-magrittr", type=("build", "run")) - depends_on("r-markdown", type=("build", "run")) depends_on("r-png", type=("build", "run")) depends_on("r-rcolorbrewer", type=("build", "run")) depends_on("r-raster", type=("build", "run")) + depends_on("r-raster@3.6.3:", type=("build", "run"), when="@2.2.0:") depends_on("r-scales@1.0.0:", type=("build", "run")) depends_on("r-sp", type=("build", "run")) - depends_on("r-viridis@0.5.1:", type=("build", "run"), when="@2.0.0:") - depends_on("r-leaflet-providers@1.8.0:", type=("build", "run"), when="@2.0.4.1:") + depends_on("r-viridislite", type=("build", "run"), when="@2.2.0:") + depends_on("r-xfun", type=("build", "run"), when="@2.2.0:") + + depends_on("r-base64enc", type=("build", "run"), when="@:2.1.2") + depends_on("r-markdown", type=("build", "run"), when="@:2.1.2") + depends_on("r-viridis@0.5.1:", type=("build", "run"), when="@2.0.0:2.1.2") diff --git a/var/spack/repos/builtin/packages/r-leaps/package.py b/var/spack/repos/builtin/packages/r-leaps/package.py index ee2ae5752b..fd8f9095f0 100644 --- a/var/spack/repos/builtin/packages/r-leaps/package.py +++ b/var/spack/repos/builtin/packages/r-leaps/package.py @@ -15,5 +15,6 @@ class RLeaps(RPackage): license("GPL-2.0-or-later") + version("3.2", sha256="a0d6bebb676e5cdc0ecf3e3a07163ce0d60b6fe72a083d91f0413e11a8a96fad") version("3.1", sha256="3d7c3a102ce68433ecf167ece96a7ebb4207729e4defd0ac8fc00e7003f5c3b6") version("3.0", sha256="55a879cdad5a4c9bc3b5697dd4d364b3a094a49d8facb6692f5ce6af82adf285") diff --git a/var/spack/repos/builtin/packages/r-leiden/package.py b/var/spack/repos/builtin/packages/r-leiden/package.py index 045f47f7f5..17abea1f72 100644 --- a/var/spack/repos/builtin/packages/r-leiden/package.py +++ b/var/spack/repos/builtin/packages/r-leiden/package.py @@ -19,6 +19,7 @@ class RLeiden(RPackage): license("GPL-3.0-only OR custom") + version("0.4.3.1", sha256="a9ecbbcfa2724d8fdd0133af569278e036b25b6e2cbb23d453092cc6b3fc30e2") version("0.4.3", sha256="6a464b4b860e621749b3b701bb7ceb07e23c1a36be241c3e13b18105eb980938") version("0.4.2", sha256="cace86748c4aa1720508210658ee2f63f7875be5bac215084001fdc59d22e2bd") version("0.3.9", sha256="81754276e026a9a8436476365bbadf0f15a403a525a349cb56418da5d8edea0d") diff --git a/var/spack/repos/builtin/packages/r-lfe/package.py b/var/spack/repos/builtin/packages/r-lfe/package.py index fc00f5b69d..0fc064e6a4 100644 --- a/var/spack/repos/builtin/packages/r-lfe/package.py +++ b/var/spack/repos/builtin/packages/r-lfe/package.py @@ -24,6 +24,7 @@ class RLfe(RPackage): license("Artistic-2.0") + version("3.0-0", sha256="342d05c32932d0db755c35a7e27da1001a38e375866c6f61a18259faf0430399") version("2.9-0", sha256="7c9a9cd74ad98c65b67477eb6924409d7e372d01d7ed50fa2edb6fa34e02223c") version("2.8-8", sha256="0fc22928fa16f22ee66c8e426a0e994346ad2f67b3c5aea597f3eeffbd85ab71") version("2.8-7.1", sha256="d6a1efd8c43f84fa291e4959938f16e85bf5feef113515aaca1fe90075a78c50") diff --git a/var/spack/repos/builtin/packages/r-lhs/package.py b/var/spack/repos/builtin/packages/r-lhs/package.py index b04915a5a2..7277c6a42d 100644 --- a/var/spack/repos/builtin/packages/r-lhs/package.py +++ b/var/spack/repos/builtin/packages/r-lhs/package.py @@ -16,6 +16,7 @@ class RLhs(RPackage): license("GPL-3.0-only") + version("1.2.0", sha256="6b4b773c6b322f1ffb3e2ef49c244ec8a3958a0346a1cc8f42f0d0951e8b0724") version("1.1.6", sha256="e37fce44efe6a371677ba2f72f9e1e48270a0fdc60872d05def89270586cd23f") version("1.1.5", sha256="7a3c6fdcc953490e51026e17a0b1a9dc0ca8d03e6fc989457a7cdda2075b6339") version("1.1.3", sha256="e43b8d48db1cf26013697e2a798ed1d31d1ee1790f2ebfecb280176c0e0c06d1") diff --git a/var/spack/repos/builtin/packages/r-libcoin/package.py b/var/spack/repos/builtin/packages/r-libcoin/package.py index 34c66ac1f8..b22b63182d 100644 --- a/var/spack/repos/builtin/packages/r-libcoin/package.py +++ b/var/spack/repos/builtin/packages/r-libcoin/package.py @@ -18,6 +18,7 @@ class RLibcoin(RPackage): license("GPL-2.0-only") + version("1.0-10", sha256="3023e0495d0789765bdf04c0ef0990a57b48fefa322c55f20e250d2d70d67eaf") version("1.0-9", sha256="2d7dd0b7c6dfc20472430570419ea36a714da7bbafd336da1fb53c5c6463d9eb") version("1.0-6", sha256="48afc1415fc89b29e4f2c8b6f6db3cffef1531580e5c806ad7cacf4afe6a4e5a") version("1.0-4", sha256="91dcbaa0ab8c2109aa54c3eda29ad0acd67c870efcda208e27acce9d641c09c5") diff --git a/var/spack/repos/builtin/packages/r-lifecycle/package.py b/var/spack/repos/builtin/packages/r-lifecycle/package.py index 6a72cd526a..4ef0c7327b 100644 --- a/var/spack/repos/builtin/packages/r-lifecycle/package.py +++ b/var/spack/repos/builtin/packages/r-lifecycle/package.py @@ -22,6 +22,7 @@ class RLifecycle(RPackage): license("MIT") + version("1.0.4", sha256="ada4d3c7e84b0c93105e888647c5754219a8334f6e1f82d5afaf83d4855b91cc") version("1.0.3", sha256="6459fdc3211585c0cdf120427579c12149b02161efe273a64b825c05e9aa69c2") version("1.0.1", sha256="1da76e1c00f1be96ca34e122ae611259430bf99d6a1b999fdef70c00c30f7ba0") version("0.2.0", sha256="29746e8dee05d4e36f9c612e8c7a903a4f648a36b3b94c9776e518c38a412224") @@ -29,7 +30,9 @@ class RLifecycle(RPackage): depends_on("r@3.2:", type=("build", "run")) depends_on("r@3.3:", type=("build", "run"), when="@1:") depends_on("r@3.4:", type=("build", "run"), when="@1.0.3:") + depends_on("r@3.6:", type=("build", "run"), when="@1.0.4:") depends_on("r-cli@3.4.0:", type=("build", "run"), when="@1.0.3:") depends_on("r-glue", type=("build", "run")) depends_on("r-rlang@0.4.0:", type=("build", "run")) depends_on("r-rlang@1.0.6:", type=("build", "run"), when="@1.0.3:") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.0.4:") diff --git a/var/spack/repos/builtin/packages/r-limsolve/package.py b/var/spack/repos/builtin/packages/r-limsolve/package.py index ae67f10b81..2d042d4e43 100644 --- a/var/spack/repos/builtin/packages/r-limsolve/package.py +++ b/var/spack/repos/builtin/packages/r-limsolve/package.py @@ -18,6 +18,7 @@ class RLimsolve(RPackage): cran = "limSolve" + version("1.5.7.1", sha256="a5945217bbf512724297883f8d7c65846a11202266b2b6bb3355372935e85b92") version("1.5.6", sha256="b97ea9930383634c8112cdbc42f71c4e93fe0e7bfaa8f401921835cb44cb49a0") depends_on("r@2.10:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-list/package.py b/var/spack/repos/builtin/packages/r-list/package.py new file mode 100644 index 0000000000..25113da7b6 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-list/package.py @@ -0,0 +1,30 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RList(RPackage): + """Allows researchers to conduct multivariate statistical analyses + of survey data with list experiments.""" + + homepage = "https://cran.r-project.org/web/packages/list/index.html" + cran = "list" + + license("GPL-2.0-or-later", checked_by="wdconinc") + + version("9.2.6", sha256="6a2b1dd9cdee87d739605fb38463cb6e04680c94b73f51fbd39b5552a62432e4") + + depends_on("r@3.2.0:", type=("build", "run")) + depends_on("r-sandwich@2.3-3:", type=("build", "run")) + depends_on("r-vgam@0.9-8:", type=("build", "run")) + depends_on("r-magic@1.5-6:", type=("build", "run")) + depends_on("r-gamlss-dist@4.3-4:", type=("build", "run")) + depends_on("r-mass@7.3-40:", type=("build", "run")) + depends_on("r-quadprog@1.5-5:", type=("build", "run")) + depends_on("r-corpcor@1.6.7:", type=("build", "run")) + depends_on("r-mvtnorm@1.0-2:", type=("build", "run")) + depends_on("r-coda@0.17-1:", type=("build", "run")) + depends_on("r-arm", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-listenv/package.py b/var/spack/repos/builtin/packages/r-listenv/package.py index d9370a0b79..568202242f 100644 --- a/var/spack/repos/builtin/packages/r-listenv/package.py +++ b/var/spack/repos/builtin/packages/r-listenv/package.py @@ -17,6 +17,7 @@ class RListenv(RPackage): license("LGPL-2.1-or-later") + version("0.9.1", sha256="422aaf487b91c6512b83c05536f8dac255db79b16ee85254acc59a3fda8c1c3b") version("0.9.0", sha256="352841e04f0725d361b78cfdc75e00511f740d97237dd651ea86aa5484674887") version("0.8.0", sha256="fd2aaf3ff2d8d546ce33d1cb38e68401613975117c1f9eb98a7b41facf5c485f") version("0.7.0", sha256="6126020b111870baea08b36afa82777cd578e88c17db5435cd137f11b3964555") diff --git a/var/spack/repos/builtin/packages/r-lme4/package.py b/var/spack/repos/builtin/packages/r-lme4/package.py index cff157fee1..024091b3a1 100644 --- a/var/spack/repos/builtin/packages/r-lme4/package.py +++ b/var/spack/repos/builtin/packages/r-lme4/package.py @@ -18,6 +18,7 @@ class RLme4(RPackage): license("GPL-2.0-or-later") + version("1.1-35.5", sha256="7d6664db7ea96429562efe1058da58985d779d6fe79ec6f4e86ba68047135170") version("1.1-33", sha256="d956a5ed7cbcc016114a836bad89acf6cdafcd0f82a7d85e3805ced936b40910") version("1.1-31", sha256="5affd1e33d3fece5ec0a6c7663eb12328e64147f8aa92675ce6453c4fe72edfd") version("1.1-30", sha256="fdabdfc4b64cff05ae9506a766c948a953eeb6db71761f9401b36d6d9979300f") @@ -32,7 +33,9 @@ class RLme4(RPackage): depends_on("r@3.0.2:", type=("build", "run")) depends_on("r@3.2.0:", type=("build", "run"), when="@1.1-16:") depends_on("r@3.5.0:", type=("build", "run"), when="@1.1-31:") + depends_on("r@3.6.0:", type=("build", "run"), when="@1.1-35.5:") depends_on("r-matrix@1.2-1:", type=("build", "run")) + depends_on("r-matrix@1.2-3:", type=("build", "run"), when="@1.1-35.5:") depends_on("r-mass", type=("build", "run")) depends_on("r-lattice", type=("build", "run")) depends_on("r-boot", type=("build", "run"), when="@1.1-21:") @@ -41,5 +44,6 @@ class RLme4(RPackage): depends_on("r-nloptr@1.0.4:", type=("build", "run")) depends_on("r-rcpp@0.10.5:", type=("build", "run")) depends_on("r-rcppeigen", type=("build", "run")) + depends_on("r-rcppeigen@0.3.3.9.4:", type=("build", "run"), when="@1.1-35.1:") depends_on("r-statmod", type=("build", "run"), when="@1.1-26") diff --git a/var/spack/repos/builtin/packages/r-locfit/package.py b/var/spack/repos/builtin/packages/r-locfit/package.py index 932e614ba5..8f0bbe58bb 100644 --- a/var/spack/repos/builtin/packages/r-locfit/package.py +++ b/var/spack/repos/builtin/packages/r-locfit/package.py @@ -16,6 +16,7 @@ class RLocfit(RPackage): license("GPL-2.0-or-later") + version("1.5-9.10", sha256="4c20661814993a87ca435f42b0814bacb87c5a9ccc2ff55e4cae718cb176ac06") version("1.5-9.7", sha256="48e5fcd089fbc609d8e4c62c390425fba1dd167ad95ae0bddc175cbbe1517aff") version("1.5-9.6", sha256="1ee89e4003cb769feae61ada7ac0a971df30644824f7ed84a21dd5719f713476") version("1.5-9.5", sha256="fd9f2bad9d8beec8be4843dc80e38ebe0f388835a7003490f67e57eeb9e6de23") diff --git a/var/spack/repos/builtin/packages/r-loo/package.py b/var/spack/repos/builtin/packages/r-loo/package.py index 68f9e89684..909a7fd95d 100644 --- a/var/spack/repos/builtin/packages/r-loo/package.py +++ b/var/spack/repos/builtin/packages/r-loo/package.py @@ -24,6 +24,7 @@ class RLoo(RPackage): license("GPL-3.0-or-later") + version("2.8.0", sha256="aab727a95a2e1c0e5005188e7daa6eba52455fa0c5869130d53cee5a8963244c") version("2.6.0", sha256="66da60fdf53a62cbc93797fa696a4cc43bce77f1721dd4bc1a58d25b3f981210") version("2.5.1", sha256="866a2f54a4e8726cc3062e27daa8a073e6ac4aeb6719af7845284f7a668745f1") version("2.4.1", sha256="bc21fb6b4a93a7e95ee1be57e4e787d731895fb8b4743c26b30b43adee475b50") @@ -35,4 +36,5 @@ class RLoo(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r-checkmate", type=("build", "run")) depends_on("r-matrixstats@0.52:", type=("build", "run")) + depends_on("r-posterior@1.5.0:", type=("build", "run"), when="@2.7.0:") depends_on("pandoc@1.12.3:") diff --git a/var/spack/repos/builtin/packages/r-lpsolve/package.py b/var/spack/repos/builtin/packages/r-lpsolve/package.py index 01847c8158..208dbf4962 100644 --- a/var/spack/repos/builtin/packages/r-lpsolve/package.py +++ b/var/spack/repos/builtin/packages/r-lpsolve/package.py @@ -17,6 +17,7 @@ class RLpsolve(RPackage): cran = "lpSolve" + version("5.6.20", sha256="3ffe06a0685123c36cd306b874f89a59a70c864c8f78c5569f82a86abedc21db") version("5.6.18", sha256="751e1926fcd81b852b6c0d5ea7ecd9311ef6fbdbce9143b7872fea79590de712") version("5.6.17", sha256="f725802bd9dc05c6913daf48f2458441ad4d2996056d0942737886d8b76c9288") version("5.6.16", sha256="18a11e5184914e02b056d3d8f54ad92e4bbce651d930d61430570b4ae2ecbb2a") diff --git a/var/spack/repos/builtin/packages/r-lpsolveapi/package.py b/var/spack/repos/builtin/packages/r-lpsolveapi/package.py index 3e313013b1..9018b79f2c 100644 --- a/var/spack/repos/builtin/packages/r-lpsolveapi/package.py +++ b/var/spack/repos/builtin/packages/r-lpsolveapi/package.py @@ -17,6 +17,9 @@ class RLpsolveapi(RPackage): cran = "lpSolveAPI" version( + "5.5.2.0-17.12", sha256="4f00a9d27055ddf3e2a4b0a529b720861b9f916f2ceb1fe0b71e4c52da5b70ef" + ) + version( "5.5.2.0-17.9", sha256="7b52ecf3f1174f771fe24e62502be6d31acc3e48a12473e35ad0a89fc2517811" ) version( diff --git a/var/spack/repos/builtin/packages/r-lubridate/package.py b/var/spack/repos/builtin/packages/r-lubridate/package.py index f3ea109ef5..a2b37be108 100644 --- a/var/spack/repos/builtin/packages/r-lubridate/package.py +++ b/var/spack/repos/builtin/packages/r-lubridate/package.py @@ -20,6 +20,7 @@ class RLubridate(RPackage): license("GPL-2.0-or-later") + version("1.9.3", sha256="2b6e1406d231b0a14d60b99cc406d159fea5465a5694725ad25343f12cf37fff") version("1.9.2", sha256="8976431a4affe989261cbaa5e09cd44bb42a3b16eed59a42c1698da34c6544a7") version("1.9.0", sha256="b936041f8a71894ef930cfff61b45833e0dd148b5b16697f4f541d25b31a903a") version("1.8.0", sha256="87d66efdb1f3d680db381d7e40a202d35645865a0542e2f270ef008a19002ba5") diff --git a/var/spack/repos/builtin/packages/r-lwgeom/package.py b/var/spack/repos/builtin/packages/r-lwgeom/package.py index c25ea73c5d..2b09ba6336 100644 --- a/var/spack/repos/builtin/packages/r-lwgeom/package.py +++ b/var/spack/repos/builtin/packages/r-lwgeom/package.py @@ -17,6 +17,7 @@ class RLwgeom(RPackage): license("GPL-2.0-only") + version("0.2-14", sha256="26db6cf7dbc8cf43a70e5e2a34941a1c4b65e182f86f58d64ff9f614b3be929c") version("0.2-11", sha256="7fd73cf58981f9566d946bf63ed6575ea0c70634abeaf4e60ef9615040d63419") version("0.2-9", sha256="69b2a2efdafb0b32c801932eee7cd2c4b8402cede6487f4dfea4e14873091aa8") version("0.2-8", sha256="f48a92de222da0590b37a30d5cbf2364555044a842795f6b488afecc650b8b34") @@ -25,8 +26,10 @@ class RLwgeom(RPackage): depends_on("r@3.3.0:", type=("build", "run")) depends_on("r-rcpp", type=("build", "run")) depends_on("r-units", type=("build", "run")) - depends_on("r-sf@0.9-3:", type=("build", "run")) - depends_on("r-sf@0.6-0:", type=("build", "run"), when="@0.2-9:") + depends_on("r-sf@0.6-0:", type=("build", "run"), when="@0.1-3:") + depends_on("r-sf@0.9-0:", type=("build", "run"), when="@0.2-2:") + depends_on("r-sf@0.9-3:", type=("build", "run"), when="@0.2-4:") + depends_on("r-sf@1.0-15:", type=("build", "run"), when="@0.2-14:") depends_on("geos@3.5.0:") depends_on("proj@4.8.0:6.999") depends_on("sqlite", when="@0.2-8:") diff --git a/var/spack/repos/builtin/packages/r-magick/package.py b/var/spack/repos/builtin/packages/r-magick/package.py index c722a4b67c..f8f507f93f 100644 --- a/var/spack/repos/builtin/packages/r-magick/package.py +++ b/var/spack/repos/builtin/packages/r-magick/package.py @@ -24,6 +24,7 @@ class RMagick(RPackage): license("MIT") + version("2.8.4", sha256="45c803370f0d96b729db8114b3e2187cbe6fac13133b67b96a91c8eae734ea0a") version("2.7.4", sha256="e28d67737590f8c19e4cf00a9c74e59d0e45f9ece363ed105b5f40e821e8f02f") version("2.7.3", sha256="83877b2e23ea43fbc1164de9c2422eafbe7858393ac384df5adf3a7eec122441") version("2.6.0", sha256="66585336e3ff18793ae9e2726af67a6672622f270468670ab5fe5e013bc48ecc") diff --git a/var/spack/repos/builtin/packages/r-maldiquant/package.py b/var/spack/repos/builtin/packages/r-maldiquant/package.py index 3d646cd433..baf6e8c6a1 100644 --- a/var/spack/repos/builtin/packages/r-maldiquant/package.py +++ b/var/spack/repos/builtin/packages/r-maldiquant/package.py @@ -20,6 +20,7 @@ class RMaldiquant(RPackage): cran = "MALDIquant" + version("1.22.3", sha256="fd094f0ea1a163ad1bd290e789ad827a76075d82ae5ce8a8e53a7095a7479383") version("1.22.1", sha256="0a52a55dbe76a7e7ca50c5555fea4381eeda0c215c66e420d8dc9bfd2992411c") version("1.21", sha256="0771f82034aa6a77af67f3572c900987b7e6b578d04d707c6e06689d021a2ff8") version("1.19.3", sha256="a730327c1f8d053d29e558636736b7b66d0671a009e0004720b869d2c76ff32c") diff --git a/var/spack/repos/builtin/packages/r-mapplots/package.py b/var/spack/repos/builtin/packages/r-mapplots/package.py index f19a3424c1..4ec8d101b2 100644 --- a/var/spack/repos/builtin/packages/r-mapplots/package.py +++ b/var/spack/repos/builtin/packages/r-mapplots/package.py @@ -18,6 +18,7 @@ class RMapplots(RPackage): license("GPL-2.0-or-later") + version("1.5.2", sha256="ed0e151d6865549d1a10882984a7fb29bc89a7b94ad69e512f90937b981c8a18") version("1.5.1", sha256="37e96d34f37922180e07bb63b4514e07d42eee5bbf0885b278286ee48cf142a3") depends_on("r@2.10.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-maps/package.py b/var/spack/repos/builtin/packages/r-maps/package.py index b6b6e19dc5..13840200da 100644 --- a/var/spack/repos/builtin/packages/r-maps/package.py +++ b/var/spack/repos/builtin/packages/r-maps/package.py @@ -16,6 +16,7 @@ class RMaps(RPackage): license("GPL-2.0-only") + version("3.4.2", sha256="53e57b889f1779cfd4a116a8ed3eded7ed29a73a1b9506248772a389c8404b0c") version("3.4.1", sha256="e693a5218ed8122e92d73a98a475d9016f2293c7852c8048677daa7649086400") version("3.4.0", sha256="7918ccb2393ca19589d4c4e77d9ebe863dc6317ebfc1ff41869dbfaf439f5747") version("3.3.0", sha256="199afe19a4edcef966ae79ef802f5dcc15a022f9c357fcb8cae8925fe8bd2216") diff --git a/var/spack/repos/builtin/packages/r-maptools/package.py b/var/spack/repos/builtin/packages/r-maptools/package.py index 8ca5172291..00278c11b8 100644 --- a/var/spack/repos/builtin/packages/r-maptools/package.py +++ b/var/spack/repos/builtin/packages/r-maptools/package.py @@ -17,6 +17,7 @@ class RMaptools(RPackage): cran = "maptools" + version("1.1-8", sha256="5e8579e3f559161935f1dde622ece703eefa2a28a677ce553d7f27611e66e0f7") version( "1.1-6", sha256="d6a5df52db03b2231f21921b693c67f85df3c3b376181aa13ef4f21710f69308", diff --git a/var/spack/repos/builtin/packages/r-mapview/package.py b/var/spack/repos/builtin/packages/r-mapview/package.py index aa7f0dc717..47f23046d5 100644 --- a/var/spack/repos/builtin/packages/r-mapview/package.py +++ b/var/spack/repos/builtin/packages/r-mapview/package.py @@ -18,6 +18,7 @@ class RMapview(RPackage): license("GPL-3.0-or-later OR custom") + version("2.11.2", sha256="414d7f732b3aaf62005e279d7b0febf50aed2183bf05522c4fccaa92117328b0") version("2.11.0", sha256="87f8cf562a0918201082a743438b9af47429bdb8871511235d72505107f4d30a") version("2.10.0", sha256="b597902c654b9abf1163bb9d4f1044fef85d0a52c8dc6538ca46b0024f63baaa") version("2.9.0", sha256="170cb2b5e67cbeb177f87bd2eab1ecabc44a1042addbcd95a85b2ec4a00eb690") @@ -33,10 +34,12 @@ class RMapview(RPackage): depends_on("r-leafpop", type=("build", "run")) depends_on("r-png", type=("build", "run")) depends_on("r-raster", type=("build", "run")) + depends_on("r-raster@3.6.3:", type=("build", "run"), when="@2.11.2:") depends_on("r-satellite", type=("build", "run")) depends_on("r-scales@0.2.5:", type=("build", "run")) depends_on("r-servr", type=("build", "run"), when="@2.10.0:") depends_on("r-sf", type=("build", "run")) depends_on("r-sp", type=("build", "run")) - depends_on("r-webshot", type=("build", "run")) depends_on("gmake", type="build") + + depends_on("r-webshot", type=("build", "run"), when="@:2.11.0") diff --git a/var/spack/repos/builtin/packages/r-markdown/package.py b/var/spack/repos/builtin/packages/r-markdown/package.py index 2453101e8e..6f3ed794bb 100644 --- a/var/spack/repos/builtin/packages/r-markdown/package.py +++ b/var/spack/repos/builtin/packages/r-markdown/package.py @@ -19,6 +19,7 @@ class RMarkdown(RPackage): license("MIT") + version("1.13", sha256="385421c674cf5bf2ba04d1df7c16bb5d857bec03755a36321999ac37f5b3cfd9") version("1.6", sha256="46228b8d8161ae4b651b4662364eb35a3b91e6a7a457fe99d0e709f2a6f559ea") version("1.3", sha256="b1773e94e7b927c3a8540c2704b06e0f7721a0e3538a93abd58fff420ecb30f1") version("1.1", sha256="8d8cd47472a37362e615dbb8865c3780d7b7db694d59050e19312f126e5efc1b") diff --git a/var/spack/repos/builtin/packages/r-mass/package.py b/var/spack/repos/builtin/packages/r-mass/package.py index 035d1ed900..4120bc3c4d 100644 --- a/var/spack/repos/builtin/packages/r-mass/package.py +++ b/var/spack/repos/builtin/packages/r-mass/package.py @@ -14,6 +14,7 @@ class RMass(RPackage): cran = "MASS" + version("7.3-61", sha256="3144c8bf579dd7b7c47c259728c27f53f53e294e7ed307da434dfd144e800a90") version("7.3-59", sha256="454200bec7a52835fbb7f9fe8e01a7aaa728b3ab87b068fc6d900e01c930da5a") version("7.3-58.1", sha256="f704e4e2fb131740d023ae1755c925c2e684886a3061b08e26397135f1231420") version("7.3-57", sha256="bd8b880105bc1aadb2db699086f74bd92a8611287979a24243187f9d80795a8d") @@ -28,3 +29,4 @@ class RMass(RPackage): depends_on("r@3.1.0:", type=("build", "run")) depends_on("r@3.3.0:", type=("build", "run"), when="@7.3-55:") depends_on("r@4.2.0:", type=("build", "run"), when="@7.3-59:") + depends_on("r@4.4.0:", type=("build", "run"), when="@7.3-60.1:") diff --git a/var/spack/repos/builtin/packages/r-matlab/package.py b/var/spack/repos/builtin/packages/r-matlab/package.py index 1483e71247..f0b0666a19 100644 --- a/var/spack/repos/builtin/packages/r-matlab/package.py +++ b/var/spack/repos/builtin/packages/r-matlab/package.py @@ -15,6 +15,7 @@ class RMatlab(RPackage): license("Artistic-2.0") + version("1.0.4.1", sha256="fc3fba560b73a9bf0a4f317340856c91af2c9dcc80f5df291f3f7e6d6ac4fd50") version("1.0.4", sha256="1988a2220703444a575f2bad4eb090a0da71478599eb53081dd7237b7ec216ea") version("1.0.2", sha256="a23dec736c51ae1864c1a53caac556a2f98e8020138a3b121badb0f5b7984154") diff --git a/var/spack/repos/builtin/packages/r-matrix/package.py b/var/spack/repos/builtin/packages/r-matrix/package.py index 16dbc8fe2f..a2d8cda3aa 100644 --- a/var/spack/repos/builtin/packages/r-matrix/package.py +++ b/var/spack/repos/builtin/packages/r-matrix/package.py @@ -18,6 +18,7 @@ class RMatrix(RPackage): license("GPL-3.0-only") + version("1.7-0", sha256="fb97bba0df370222eb4f7e2da2e94dd01053b5e054b1c51829ff9a6efc08ad37") version("1.5-4", sha256="15ceb61993d61b442068104abb46e6d91b5a1179c01eeb64563b853abab66f06") version("1.5-1", sha256="557dba0358172d67dc63eb5db90841915bb5ce1528f941a8005ae808d635575d") version("1.4-1", sha256="42b24f1d1e94482b0ff0ef1292e2df29f69694bdbee47b3d6bfeec46fafb2f7e") @@ -32,7 +33,8 @@ class RMatrix(RPackage): version("1.2-6", sha256="4b49b639b7bf612fa3d1c1b1c68125ec7859c8cdadae0c13f499f24099fd5f20") depends_on("r@3.0.1:", type=("build", "run")) - depends_on("r@3.2.0:", type=("build", "run"), when="@1.2.13:") + depends_on("r@3.2.0:", type=("build", "run"), when="@1.2-13:") depends_on("r@3.6.0:", type=("build", "run"), when="@1.3-2:") depends_on("r@3.5.0:", type=("build", "run"), when="@1.3-3:") + depends_on("r@4.4.0:", type=("build", "run"), when="@1.7-0:") depends_on("r-lattice", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-matrixmodels/package.py b/var/spack/repos/builtin/packages/r-matrixmodels/package.py index ead6d5734c..d5839d1ec7 100644 --- a/var/spack/repos/builtin/packages/r-matrixmodels/package.py +++ b/var/spack/repos/builtin/packages/r-matrixmodels/package.py @@ -14,6 +14,7 @@ class RMatrixmodels(RPackage): cran = "MatrixModels" + version("0.5-3", sha256="c2db5406c6b0b9d348b44eea215a39c64fc087099fea1342a04d50326577f20f") version("0.5-1", sha256="3fc55bdfa5ab40c75bf395e90983d14c9715078c33c727c1658e4e1f36e43ea9") version("0.5-0", sha256="a87faf1a185219f79ea2307e6787d293e1d30bf3af9398e8cfe1e079978946ed") version("0.4-1", sha256="fe878e401e697992a480cd146421c3a10fa331f6b37a51bac83b5c1119dcce33") @@ -22,3 +23,4 @@ class RMatrixmodels(RPackage): depends_on("r@3.6.0:", type=("build", "run"), when="@0.5-1:") depends_on("r-matrix@1.1-5:", type=("build", "run")) depends_on("r-matrix@1.4-2:", type=("build", "run"), when="@0.5-1:") + depends_on("r-matrix@1.6-0:", type=("build", "run"), when="@0.5-2:") diff --git a/var/spack/repos/builtin/packages/r-matrixstats/package.py b/var/spack/repos/builtin/packages/r-matrixstats/package.py index aeb8639d08..5a90d3d333 100644 --- a/var/spack/repos/builtin/packages/r-matrixstats/package.py +++ b/var/spack/repos/builtin/packages/r-matrixstats/package.py @@ -17,6 +17,7 @@ class RMatrixstats(RPackage): cran = "matrixStats" + version("1.3.0", sha256="413ee607d95b243c514b4a7c4944c2caea1fb264d27c96ff547c3939f893245a") version("0.63.0", sha256="c000b60421742eb035ff4ceedd3e588a79e4b28985484f0c81361e5a6c351f5f") version("0.62.0", sha256="85e2016b6dd20cbfe32d38a2ef2578ae80e688d9a3590aefd1d2f4bf4bd44eca") version("0.61.0", sha256="dbd3c0ec59b1ae62ff9b4c2c90c4687cbd680d1796f6fdd672319458d4d2fd9a") diff --git a/var/spack/repos/builtin/packages/r-mclust/package.py b/var/spack/repos/builtin/packages/r-mclust/package.py index 76ad0b7e0e..4eb1b82d5c 100644 --- a/var/spack/repos/builtin/packages/r-mclust/package.py +++ b/var/spack/repos/builtin/packages/r-mclust/package.py @@ -19,6 +19,7 @@ class RMclust(RPackage): license("GPL-2.0-or-later") + version("6.1.1", sha256="ddd7018e5e6ea7f92c7fc9872b391491b7e91c2cd89ef1dcaf4408afb5116775") version("6.0.0", sha256="de7c306ecba1ef0f4e4a56c748ce08149417496b711beefb032d561a4c28122a") version("5.4.10", sha256="2a1bbbf3c4a17df08d1ba8bc4d3c6d9c7241ed5fd68b8aabe660115597b60672") version("5.4.9", sha256="65f123c6af86cf5eb511c81ae0eafa60da7b2085bfea1a08bdc3116081da9568") diff --git a/var/spack/repos/builtin/packages/r-mcmc/package.py b/var/spack/repos/builtin/packages/r-mcmc/package.py index 3e32f58cef..0b65a3ddbd 100644 --- a/var/spack/repos/builtin/packages/r-mcmc/package.py +++ b/var/spack/repos/builtin/packages/r-mcmc/package.py @@ -21,6 +21,8 @@ class RMcmc(RPackage): license("MIT") + version("0.9-8", sha256="6a06440d4b58e8a7f122747d92046ff40da4bb58a20bf642228a648a0c826ea7") version("0.9-7", sha256="b7c4d3d5f9364c67a4a3cd49296a61c315ad9bd49324a22deccbacb314aa8260") depends_on("r@3.0.2:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@0.9-8:") diff --git a/var/spack/repos/builtin/packages/r-mcmcglmm/package.py b/var/spack/repos/builtin/packages/r-mcmcglmm/package.py index 7519f50751..83cd8b62c2 100644 --- a/var/spack/repos/builtin/packages/r-mcmcglmm/package.py +++ b/var/spack/repos/builtin/packages/r-mcmcglmm/package.py @@ -15,6 +15,7 @@ class RMcmcglmm(RPackage): cran = "MCMCglmm" + version("2.36", sha256="66ffd9aaf8035c7abe7208c8514c60cb56c8c6a170de207d6608f5c44a4f8af1") version("2.34", sha256="829151cca93b05979ece98157e7789d5e5c1c0b4942d69aa9886de03d16091f1") version("2.33", sha256="b56d72e799f8ed5fa2a05ecc743e5b8051f9cc2de57ad3e6de2dcb1c1715d4fc") version("2.32", sha256="a9156e1e0d0f912f2f239476dc8765dc61c480f903381be7ec5db05bd6d3f0b3") diff --git a/var/spack/repos/builtin/packages/r-mcmcpack/package.py b/var/spack/repos/builtin/packages/r-mcmcpack/package.py index 80a0d6ac68..4e3e289afd 100644 --- a/var/spack/repos/builtin/packages/r-mcmcpack/package.py +++ b/var/spack/repos/builtin/packages/r-mcmcpack/package.py @@ -19,6 +19,7 @@ class RMcmcpack(RPackage): cran = "MCMCpack" + version("1.7-0", sha256="846073d710017ec1dc9a2b4616cb6aeb60ce04e3500a37214522818d34045def") version("1.6-3", sha256="cb14ba20690b31fd813b05565484c866425f072a5ad99a5cbf1da63588958db3") version("1.6-0", sha256="b5b9493457d11d4dca12f7732bd1b3eb1443852977c8ee78393126f13deaf29b") version("1.5-0", sha256="795ffd3d62bf14d3ecb3f5307bd329cd75798cf4b270ff0e768bc71a35de0ace") @@ -26,9 +27,8 @@ class RMcmcpack(RPackage): depends_on("r@3.6:", type=("build", "run")) depends_on("r-coda@0.11-3:", type=("build", "run")) depends_on("r-lattice", type=("build", "run")) + depends_on("r-mass", type=("build", "run")) depends_on("r-mcmc", type=("build", "run")) depends_on("r-quantreg", type=("build", "run")) - depends_on("r-mass", type=("build", "run"), when="@:1.6-0") - conflicts("%gcc@:3") diff --git a/var/spack/repos/builtin/packages/r-mco/package.py b/var/spack/repos/builtin/packages/r-mco/package.py index 1f9d061f04..541e0636bd 100644 --- a/var/spack/repos/builtin/packages/r-mco/package.py +++ b/var/spack/repos/builtin/packages/r-mco/package.py @@ -17,8 +17,10 @@ class RMco(RPackage): license("GPL-2.0-only") + version("1.17", sha256="8288e99159a541855bd286baf586e61201e286dfd244080aef128871b1699ea2") version("1.15.6", sha256="17ebe279cb9c89b7cd8054ac50d3b657d2b10dadbc584b88da7e79c3a9680582") version("1.0-15.1", sha256="3c13ebc8c1f1bfa18f3f95b3998c57fde5259876e92456b6c6d4c59bef07c193") version("1.0-15", sha256="a25e3effbb6dcae735fdbd6c0bfc775e9fbbcc00dc00076b69c53fe250627055") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.4.0:", type=("build", "run"), when="@1.17:") diff --git a/var/spack/repos/builtin/packages/r-mda/package.py b/var/spack/repos/builtin/packages/r-mda/package.py index ea00d0f377..555d28efb4 100644 --- a/var/spack/repos/builtin/packages/r-mda/package.py +++ b/var/spack/repos/builtin/packages/r-mda/package.py @@ -16,6 +16,7 @@ class RMda(RPackage): license("GPL-2.0-only") + version("0.5-4", sha256="f25f7f28807d0fa478b1b55eb9d026ebc30577d9d5ff288f9abfe1f3fdb8a759") version("0.5-3", sha256="bda6409c17f385fae97da458cc742334e7b47aab8217a975b7551e2e18d38463") version("0.5-2", sha256="344f2053215ddf535d1554b4539e9b09067dac878887cc3eb995cef421fc00c3") version("0.4-10", sha256="7036bc622a8fea5b2de94fc19e6b64f5f0c27e5d743ae7646e116af08c9de6a5") diff --git a/var/spack/repos/builtin/packages/r-memisc/package.py b/var/spack/repos/builtin/packages/r-memisc/package.py index 983cf8f355..b79ef63ca6 100644 --- a/var/spack/repos/builtin/packages/r-memisc/package.py +++ b/var/spack/repos/builtin/packages/r-memisc/package.py @@ -20,6 +20,7 @@ class RMemisc(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("0.99.31.7", sha256="b403185850520db18ebd608df85c76df80e6c64af428cdc4e49c2fe487483637") version("0.99.31.6", sha256="52336b4ffc6e60c3ed10ccc7417231582b0d2e4c5c3b2184396a7d3ca9c1d96e") depends_on("r@3.3.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-mendelianrandomization/package.py b/var/spack/repos/builtin/packages/r-mendelianrandomization/package.py index 45e0017a92..c2aaec6da7 100644 --- a/var/spack/repos/builtin/packages/r-mendelianrandomization/package.py +++ b/var/spack/repos/builtin/packages/r-mendelianrandomization/package.py @@ -17,6 +17,7 @@ class RMendelianrandomization(RPackage): cran = "MendelianRandomization" + version("0.10.0", sha256="0851e91f826424f20fd4a58348ffe161d147bdc091d24d676e14d4cd6180e13c") version("0.7.0", sha256="cad7cc1b6964fc7d299864378694c5fd947caa83796a1958e581299796b854c7") depends_on("r@3.0.1:", type=("build", "run")) @@ -30,3 +31,6 @@ class RMendelianrandomization(RPackage): depends_on("r-quantreg@5.01:", type=("build", "run")) depends_on("r-rjson", type=("build", "run")) depends_on("r-glmnet", type=("build", "run")) + depends_on("r-numderiv", type=("build", "run"), when="@0.10.0:") + depends_on("r-rcpp", type=("build", "run"), when="@0.10.0:") + depends_on("r-rcpparmadillo", type=("build", "run"), when="@0.10.0:") diff --git a/var/spack/repos/builtin/packages/r-meta/package.py b/var/spack/repos/builtin/packages/r-meta/package.py index 9a1facc534..aa15244e8d 100644 --- a/var/spack/repos/builtin/packages/r-meta/package.py +++ b/var/spack/repos/builtin/packages/r-meta/package.py @@ -26,11 +26,18 @@ class RMeta(RPackage): license("GPL-2.0-or-later") + version("7.0-0", sha256="d8ead9c94f0d2b42766b8ea8358f40d0641cdcc9c25ba4b9a5fff1a59497de7d") version("6.2-1", sha256="2c2a0d4d8f3b07211120b232a155e3e1312164ce18817e0d5693c8da5da1d6cc") version("6.2-0", sha256="8ec8fb412996bbe17d3ca073f15c191a77bad486b08f39d7b8c2d07360ad5781") depends_on("r@4.0.0:", type=("build", "run")) - depends_on("r-metafor@3.0-0:", type=("build", "run")) - depends_on("r-lme4", type=("build", "run")) depends_on("r-compquadform", type=("build", "run")) + depends_on("r-dplyr", type=("build", "run"), when="@7.0-0:") + depends_on("r-lme4", type=("build", "run")) + depends_on("r-magrittr", type=("build", "run"), when="@7.0-0:") + depends_on("r-metadat", type=("build", "run"), when="@7.0-0:") + depends_on("r-metafor@3.0-0:", type=("build", "run")) + depends_on("r-purrr", type=("build", "run"), when="@7.0-0:") + depends_on("r-readr", type=("build", "run"), when="@7.0-0:") + depends_on("r-stringr", type=("build", "run"), when="@7.0-0:") depends_on("r-xml2", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-metafor/package.py b/var/spack/repos/builtin/packages/r-metafor/package.py index 0d7716b13f..df0be2ae80 100644 --- a/var/spack/repos/builtin/packages/r-metafor/package.py +++ b/var/spack/repos/builtin/packages/r-metafor/package.py @@ -31,6 +31,7 @@ class RMetafor(RPackage): license("GPL-2.0-or-later") + version("4.6-0", sha256="07344cc3bd87b8bd25ef998e9a6ce322ae8e448ef5af06ec3e79631724e18666") version("4.0-0", sha256="5cd552ebaf225b745c2e4d944ca80986dd1ad6f1a4c902fb646f3cb11b8dc23b") version("3.8-1", sha256="d694577f954144d8a5eeab6521fe1c87e68ddf9ecfd7ccc915d01533371b0514") diff --git a/var/spack/repos/builtin/packages/r-metap/package.py b/var/spack/repos/builtin/packages/r-metap/package.py index 514c44074d..4e144ec6e7 100644 --- a/var/spack/repos/builtin/packages/r-metap/package.py +++ b/var/spack/repos/builtin/packages/r-metap/package.py @@ -19,6 +19,7 @@ class RMetap(RPackage): license("GPL-2.0-only") + version("1.11", sha256="34e8c9fc3ccaae23f57389001987de02339416f843084869f92ff635052093b7") version("1.8", sha256="ee9501a8de8a4c47af1632e6053e42ef53fc4b8bdf0f2759edc4d3eefaf5552b") version("1.7", sha256="d9b511607d0e37de4428549061c5577a4e812b0f55bb7ed887d1b24711f58c42") version("1.4", sha256="5fac23d823d0ad4eebc3f97620364e25f7b41f8d0c3579f6c09ec059940b85a5") diff --git a/var/spack/repos/builtin/packages/r-mgcv/package.py b/var/spack/repos/builtin/packages/r-mgcv/package.py index a0e59e0b84..92416dc5bf 100644 --- a/var/spack/repos/builtin/packages/r-mgcv/package.py +++ b/var/spack/repos/builtin/packages/r-mgcv/package.py @@ -21,6 +21,7 @@ class RMgcv(RPackage): license("GPL-2.0-or-later") + version("1.9-1", sha256="700fbc37bedd3a49505b9bc4949faee156d9cfb4f669d797d06a10a15a5bdb32") version("1.8-42", sha256="087fc38b64ad06f2149eafc54f2679dd8840cf6fc488e66cf131e3c1de2db6c7") version("1.8-41", sha256="2f7a030fe2be75edef6bd96147df46c2262f3cdc44c383d8f82b401df44fe690") version("1.8-40", sha256="dbe627266c3b339232e2d4228d5370ba88c86540319e6891d161242efba7e4a5") diff --git a/var/spack/repos/builtin/packages/r-mice/package.py b/var/spack/repos/builtin/packages/r-mice/package.py index d61198a6c3..8fe870277b 100644 --- a/var/spack/repos/builtin/packages/r-mice/package.py +++ b/var/spack/repos/builtin/packages/r-mice/package.py @@ -25,6 +25,7 @@ class RMice(RPackage): license("GPL-2.0-or-later") + version("3.16.0", sha256="29f0285185a540337e9dde2357690c82d174f115be701ee2f0a7083173a44040") version("3.15.0", sha256="3d64dd260e3dce9c4c2f7be8c99f3063769df9ccfd3a0fc827c2de0ac842e87b") version("3.14.0", sha256="f87bb73d8bfee36c6bf4f15779c59ff6b70c70ca25b1388b4ee236757276d605") version("3.12.0", sha256="575d9e650d5fc8cd66c0b5a2f1e659605052b26d61f772fff5eed81b414ef144") @@ -36,9 +37,13 @@ class RMice(RPackage): depends_on("r-broom", type=("build", "run")) depends_on("r-dplyr", type=("build", "run")) depends_on("r-generics", type=("build", "run"), when="@3.12.0:") + depends_on("r-glmnet", type=("build", "run"), when="@3.16.0:") depends_on("r-lattice", type=("build", "run")) + depends_on("r-mitml", type=("build", "run"), when="@3.16.0:") + depends_on("r-nnet", type=("build", "run"), when="@3.16.0:") depends_on("r-rcpp", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) + depends_on("r-rpart", type=("build", "run"), when="@3.16.0:") depends_on("r-tidyr", type=("build", "run"), when="@3.12.0:") depends_on("r-cpp11", type=("build", "run"), when="@3.12.0:") diff --git a/var/spack/repos/builtin/packages/r-microbenchmark/package.py b/var/spack/repos/builtin/packages/r-microbenchmark/package.py index 5382fa8ac5..6b43c99afc 100644 --- a/var/spack/repos/builtin/packages/r-microbenchmark/package.py +++ b/var/spack/repos/builtin/packages/r-microbenchmark/package.py @@ -16,5 +16,6 @@ class RMicrobenchmark(RPackage): license("BSD-2-Clause") + version("1.4.10", sha256="04cc41be72708dce8d31ff1cb105d88cc9f167250ea00fe9a165c99204b9b481") version("1.4.9", sha256="443d2caf370ef33e4ac2773176ad9eb86f8790f43b430968ef9647699dbbffd2") version("1.4-7", sha256="268f13c6323dd28cc2dff7e991bb78b814a8873b4a73f4a3645f40423da984f6") diff --git a/var/spack/repos/builtin/packages/r-minqa/package.py b/var/spack/repos/builtin/packages/r-minqa/package.py index 44337b542c..a7dfbe87cb 100644 --- a/var/spack/repos/builtin/packages/r-minqa/package.py +++ b/var/spack/repos/builtin/packages/r-minqa/package.py @@ -16,6 +16,7 @@ class RMinqa(RPackage): license("GPL-2.0-only") + version("1.2.8", sha256="5941e4b9b01978fc6d9fe24e6ca60cca66883fe9fa6ff3cbfa32aa1ac9db5467") version("1.2.5", sha256="9b83562390990d04b2c61b63ac9a7c9ecab0d35c460d232596e3c73bdc89f4be") version("1.2.4", sha256="cfa193a4a9c55cb08f3faf4ab09c11b70412523767f19894e4eafc6e94cccd0c") diff --git a/var/spack/repos/builtin/packages/r-mlbench/package.py b/var/spack/repos/builtin/packages/r-mlbench/package.py index f70c74bece..c99a10467b 100644 --- a/var/spack/repos/builtin/packages/r-mlbench/package.py +++ b/var/spack/repos/builtin/packages/r-mlbench/package.py @@ -16,6 +16,7 @@ class RMlbench(RPackage): license("GPL-2.0-only") + version("2.1-5", sha256="4dbfd652adda7c0caf544d3a6cd23a2ee97c22faefe4d15b8a6782061cc9e76f") version("2.1-3", sha256="b1f92be633243185ab86e880a1e1ac5a4dd3c535d01ebd187a4872d0a8c6f194") version("2.1-1", sha256="748141d56531a39dc4d37cf0a5165a40b653a04c507e916854053ed77119e0e6") diff --git a/var/spack/repos/builtin/packages/r-mlr/package.py b/var/spack/repos/builtin/packages/r-mlr/package.py index 00c402838e..8927e32c22 100644 --- a/var/spack/repos/builtin/packages/r-mlr/package.py +++ b/var/spack/repos/builtin/packages/r-mlr/package.py @@ -24,6 +24,7 @@ class RMlr(RPackage): license("BSD-2-Clause") + version("2.19.2", sha256="85e67049f1067a7eae0f0e5b5c4e4e46a25407a17750512220f438a0fa5097c5") version("2.19.1", sha256="9d52afd54d9d5746e798134d5675818cee65caa53d7eaf317d46ba88d5865202") version("2.19.0", sha256="1149c9b453896481c85906045aa82d511d96979ddecbe5a3faf04f9f4a5e6113") version("2.18.0", sha256="c2fe74e90ed32e5f4cbb0c09a1742051688d87db2f12dd408ddad0f5afc7f8d3") diff --git a/var/spack/repos/builtin/packages/r-mockery/package.py b/var/spack/repos/builtin/packages/r-mockery/package.py index 12e25a80e6..8ccce8f802 100644 --- a/var/spack/repos/builtin/packages/r-mockery/package.py +++ b/var/spack/repos/builtin/packages/r-mockery/package.py @@ -19,6 +19,7 @@ class RMockery(RPackage): license("MIT") + version("0.4.4", sha256="072220a0f2455fca91649fc7ce4ed503cfaa965aa769d1bd0fd6622b222845c3") version("0.4.3", sha256="9fc9f1565c51e51b33634e9fc5328211559a561f095bc4d0fa8bd8b7533d476a") version("0.4.2", sha256="988e249c366ee7faf277de004084cf5ca24b5c8a8c6e3842f1b1362ce2f7ea9b") version("0.4.1", sha256="959d83f8b21e9a89c06c73f310356790c2d63d5ba39b2b60c6777a4eb33909c1") diff --git a/var/spack/repos/builtin/packages/r-multcomp/package.py b/var/spack/repos/builtin/packages/r-multcomp/package.py index 6fd24c0aa9..3e709c8621 100644 --- a/var/spack/repos/builtin/packages/r-multcomp/package.py +++ b/var/spack/repos/builtin/packages/r-multcomp/package.py @@ -19,6 +19,7 @@ class RMultcomp(RPackage): license("GPL-2.0-only") + version("1.4-26", sha256="a100bbdfaffb8b9cf9a59decf80267421673c4f1eef44c0bc3f77be16b3a69ec") version("1.4-23", sha256="425154a58bd8f2dbaff5d16e97b03473cbc0d571b1c2e4dd66a13c6d20a8cde1") version("1.4-20", sha256="328be4fa4189bde4a7bc645d9ae5ea071ebe31ed658c8c48c4e45aa8e8c42cfc") version("1.4-19", sha256="f03473b1cfbc714cd85a0ee948e2ecdb23bcdccbe95e27237ee25e9c71e3e557") diff --git a/var/spack/repos/builtin/packages/r-multcompview/package.py b/var/spack/repos/builtin/packages/r-multcompview/package.py index bbb75b1dc4..6e95f5fa84 100644 --- a/var/spack/repos/builtin/packages/r-multcompview/package.py +++ b/var/spack/repos/builtin/packages/r-multcompview/package.py @@ -18,5 +18,6 @@ class RMultcompview(RPackage): cran = "multcompView" + version("0.1-10", sha256="38f249b22758c9f727b1656d1a08c6022a06a1ea319364ff680147d64598ad8a") version("0.1-9", sha256="1f3993e9d51f3c7a711a881b6a20081a85ffab60c27828ceb3640a6b4c887397") version("0.1-8", sha256="123d539172ad6fc63d83d1fc7f356a5ed7b691e7803827480118bebc374fd8e5") diff --git a/var/spack/repos/builtin/packages/r-multicool/package.py b/var/spack/repos/builtin/packages/r-multicool/package.py index fd79b36bde..a709fbf6ba 100644 --- a/var/spack/repos/builtin/packages/r-multicool/package.py +++ b/var/spack/repos/builtin/packages/r-multicool/package.py @@ -29,6 +29,7 @@ class RMulticool(RPackage): license("GPL-2.0-only") + version("1.0.1", sha256="bd72de1fbd7ea32018d6af09ac2af80871ebe26bf9dfdf1ba53f87e6cff56c1f") version("0.1-12", sha256="487d28d9c3c606be0cf56e2d8f8b0d79fb71949c68886ea9251fbb1c01664a36") version("0.1-11", sha256="1c907e64af2ac39facdf431a5691e69649f64af1f50e198ae39da5bf30026476") version("0.1-10", sha256="5bb0cb0d9eb64420c862877247a79bb0afadacfe23262ec8c3fa26e5e34d6ff9") diff --git a/var/spack/repos/builtin/packages/r-multitaper/package.py b/var/spack/repos/builtin/packages/r-multitaper/package.py index 024e7bbe30..5784745e4d 100644 --- a/var/spack/repos/builtin/packages/r-multitaper/package.py +++ b/var/spack/repos/builtin/packages/r-multitaper/package.py @@ -22,6 +22,7 @@ class RMultitaper(RPackage): license("GPL-2.0-or-later") + version("1.0-17", sha256="3430ca62be2ee491d29b05e461647327a8977743241af2d3c39277c920170af3") version("1.0-15", sha256="837d71f3b46fbce2bea210449cf75e609f5363ff23b7808f5f115fdc51e6a3be") version("1.0-14", sha256="c84c122541dc2874131446e23b212259b3b00590d701efee49e6740fd74a8d13") diff --git a/var/spack/repos/builtin/packages/r-munsell/package.py b/var/spack/repos/builtin/packages/r-munsell/package.py index 44e8c0c428..fd67db6402 100644 --- a/var/spack/repos/builtin/packages/r-munsell/package.py +++ b/var/spack/repos/builtin/packages/r-munsell/package.py @@ -19,6 +19,7 @@ class RMunsell(RPackage): license("MIT") + version("0.5.1", sha256="03a2fd9ac40766cded96dfe33b143d872d0aaa262a25482ce19161ca959429a6") version("0.5.0", sha256="d0f3a9fb30e2b5d411fa61db56d4be5733a2621c0edf017d090bdfa5e377e199") version("0.4.3", sha256="397c3c90af966f48eebe8f5d9e40c41b17541f0baaa102eec3ea4faae5a2bd49") diff --git a/var/spack/repos/builtin/packages/r-mvtnorm/package.py b/var/spack/repos/builtin/packages/r-mvtnorm/package.py index 57fead3897..00d927b93d 100644 --- a/var/spack/repos/builtin/packages/r-mvtnorm/package.py +++ b/var/spack/repos/builtin/packages/r-mvtnorm/package.py @@ -16,6 +16,7 @@ class RMvtnorm(RPackage): license("GPL-2.0-only") + version("1.2-6", sha256="c4dedc3c296ed8e5fd2faecdba6de302bca1dd2e96b84fd846c47a54286acd31") version("1.1-3", sha256="ff4e302139ba631280fc9c4a2ab168596bfd09e17a805974199b043697c02448") version("1.1-1", sha256="e965dad5e93babb7ded25b5ebdbd52332191b61f897d68853a379a07620d45de") version("1.0-11", sha256="0321612de99aa9bc75a45c7e029d3372736014223cbdefb80d8cae600cbc7252") diff --git a/var/spack/repos/builtin/packages/r-nanotime/package.py b/var/spack/repos/builtin/packages/r-nanotime/package.py index 35af382e82..07d29c1cd3 100644 --- a/var/spack/repos/builtin/packages/r-nanotime/package.py +++ b/var/spack/repos/builtin/packages/r-nanotime/package.py @@ -18,6 +18,7 @@ class RNanotime(RPackage): license("GPL-2.0-or-later") + version("0.3.9", sha256="cc2965edfd68f83a84142ead27a5a84e1c5b2931ec911dddecb3e0bc3ffa79d8") version("0.3.7", sha256="a771782653aef62a071682907fd7bd611f7f98fc80beda227d619aae166ccb15") version("0.3.6", sha256="df751a5cb11ca9ac8762cd1e33bc73e7d20fde9339d2c46bc6f85873388568df") version("0.3.5", sha256="44deaae58452bacea4855d018212593811401c2afc460ffb11905479013923a0") diff --git a/var/spack/repos/builtin/packages/r-ncdf4/package.py b/var/spack/repos/builtin/packages/r-ncdf4/package.py index 874a36f063..0c74f80b6a 100644 --- a/var/spack/repos/builtin/packages/r-ncdf4/package.py +++ b/var/spack/repos/builtin/packages/r-ncdf4/package.py @@ -28,6 +28,7 @@ class RNcdf4(RPackage): license("GPL-3.0-or-later") + version("1.23", sha256="8b05fee9f79dc0605e487dd5d031d2c7dcaedec8f47904983b1c26739894da89") version("1.21", sha256="2f5ae7def382c595c66b6ed0ea0529f8337108eb73de39939f9762f3fb21b30d") version("1.19", sha256="cb8d139211fc7475c435ce9f6a43e47710603409dc523b053c8b7de9848dfb63") version("1.17", sha256="db95c4729d3187d1a56dfd019958216f442be6221bd15e23cd597e6129219af6") diff --git a/var/spack/repos/builtin/packages/r-network/package.py b/var/spack/repos/builtin/packages/r-network/package.py index bea112a0b8..9028bd9c21 100644 --- a/var/spack/repos/builtin/packages/r-network/package.py +++ b/var/spack/repos/builtin/packages/r-network/package.py @@ -17,6 +17,7 @@ class RNetwork(RPackage): license("GPL-2.0-or-later") + version("1.18.2", sha256="bf33892db9cabba9cd1597f09ef0e1277d63520a8cebd2d919e0d41fc706a27b") version("1.18.1", sha256="c80d70352967d8480cfa801f2a31bfe130e2ad4dbf2c07b0046e57f3013cd243") version("1.18.0", sha256="59f4b10174c87c8742c6b3c93c5e47833042375f5f872fdd23155b4a5244ce5b") version("1.17.2", sha256="9588a198807c8c68da147f479ca9af5bcb4468cf91b6a90b8044d313d9fa30f7") diff --git a/var/spack/repos/builtin/packages/r-nimble/package.py b/var/spack/repos/builtin/packages/r-nimble/package.py index 816780deeb..c85b3e059f 100644 --- a/var/spack/repos/builtin/packages/r-nimble/package.py +++ b/var/spack/repos/builtin/packages/r-nimble/package.py @@ -28,6 +28,7 @@ class RNimble(RPackage): license("BSD-3-Clause OR GPL-2.0-or-later") + version("1.2.1", sha256="2e8571e73e5b7553ee84db376444c18e211d4ba542ed415004c5128cb6802587") version("0.13.1", sha256="dc70caab64a8a4e44fb13fa6d67f6f2a0453fa684669e24718758bb2a8cf8530") version("0.12.2", sha256="2af7a3ab159a7f0b3b4b139da1db45be4b602f2c0e115cb0403b060ab0101a1b") version("0.12.1", sha256="3520f3212a48c8cbe08a6a8e57b3a72180594f7c09f647d1daf417c9857867d8") @@ -38,5 +39,7 @@ class RNimble(RPackage): depends_on("r@3.1.2:", type=("build", "run")) depends_on("r-igraph", type=("build", "run")) depends_on("r-coda", type=("build", "run")) + depends_on("r-numderiv", type=("build", "run"), when="@1.2.1:") + depends_on("r-pracma", type=("build", "run"), when="@1.2.1:") depends_on("r-r6", type=("build", "run")) depends_on("gmake", type="build") diff --git a/var/spack/repos/builtin/packages/r-nleqslv/package.py b/var/spack/repos/builtin/packages/r-nleqslv/package.py index da58b461a9..86dd4de0c7 100644 --- a/var/spack/repos/builtin/packages/r-nleqslv/package.py +++ b/var/spack/repos/builtin/packages/r-nleqslv/package.py @@ -19,6 +19,7 @@ class RNleqslv(RPackage): license("GPL-2.0-or-later") + version("3.3.5", sha256="1298172d2fe67d8d6b742ce7e792f6b897f081da5c94d34f14970ab531f04b3a") version("3.3.4", sha256="2783e7525bcd155dd8cedf5a41b7db65cd1fa0e095cd937371448316f3930fcf") version("3.3.3", sha256="2e46dfce95ddfd7ed5208413ee41f6bdf1ae18414fb1d0c146d9da3af12ac633") version("3.3.2", sha256="f54956cf67f9970bb3c6803684c84a27ac78165055745e444efc45cfecb63fed") diff --git a/var/spack/repos/builtin/packages/r-nlme/package.py b/var/spack/repos/builtin/packages/r-nlme/package.py index f08f3a4b2c..38f6eeb5bc 100644 --- a/var/spack/repos/builtin/packages/r-nlme/package.py +++ b/var/spack/repos/builtin/packages/r-nlme/package.py @@ -15,6 +15,7 @@ class RNlme(RPackage): license("GPL-2.0-or-later") + version("3.1-166", sha256="237a14ee8d78755b11a7efe234b95be40b46fbdd1b4aaf463f6d532be1909762") version("3.1-162", sha256="ba6da2575554afa2614c4cba9971f8a9f8a07622d201284cb78899f3d6a2dc67") version("3.1-160", sha256="d4454623194876b083774c662fd223bc3b9e8325824cb758b8adecd5dc0d8a08") version("3.1-159", sha256="9bb05f5c3146e2d75078e668821485a3e9ca246fd5d7db2ef1963d3735d919bf") @@ -32,4 +33,5 @@ class RNlme(RPackage): depends_on("r@3.3.0:", type=("build", "run"), when="@3.1-131.1") depends_on("r@3.5.0:", type=("build", "run"), when="@3.1-134:3.1-135") depends_on("r@3.4.0:", type=("build", "run"), when="@3.1-135.5:") + depends_on("r@3.6.0:", type=("build", "run"), when="@3.1-165:") depends_on("r-lattice", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-nloptr/package.py b/var/spack/repos/builtin/packages/r-nloptr/package.py index 9d53c84916..946812061b 100644 --- a/var/spack/repos/builtin/packages/r-nloptr/package.py +++ b/var/spack/repos/builtin/packages/r-nloptr/package.py @@ -25,6 +25,7 @@ class RNloptr(RPackage): license("LGPL-3.0-or-later") + version("2.1.1", sha256="4cdaf55dfdeb090119f2c2ca77f617962524654da4511bacd650f62bb6dad8ea") version("2.0.3", sha256="7b26ac1246fd1bd890817b0c3a145456c11aec98458b8518de863650b99616d7") version("2.0.0", sha256="65ca3149cfc9ba15ac10a91f34b5d86b20f5fd693f44e3edf3e392402911619a") version("1.2.2.3", sha256="af08b74fd5e7b4cb455fe67ed759346cbb8f3b9a4178f5f117e0092e5c9af6ff") @@ -32,7 +33,7 @@ class RNloptr(RPackage): version("1.2.1", sha256="1f86e33ecde6c3b0d2098c47591a9cd0fa41fb973ebf5145859677492730df97") version("1.0.4", sha256="84225b993cb1ef7854edda9629858662cc8592b0d1344baadea4177486ece1eb") - depends_on("r-testthat", when="@2.0.0:") + depends_on("r-testthat", when="@2.0.0:2.1.0") depends_on("nlopt@2.4.0:") depends_on("nlopt@2.7.0:", when="@2.0.0:") diff --git a/var/spack/repos/builtin/packages/r-nmf/package.py b/var/spack/repos/builtin/packages/r-nmf/package.py index 744605ac88..db582ce04f 100644 --- a/var/spack/repos/builtin/packages/r-nmf/package.py +++ b/var/spack/repos/builtin/packages/r-nmf/package.py @@ -18,6 +18,7 @@ class RNmf(RPackage): cran = "NMF" + version("0.27", sha256="af4302efca4a7654fecd31c376f1bb3496428279a50b8d5691c8a7e66e3f3ef9") version("0.26", sha256="8d44562ef5f33f3811929f944c9d029ec25526d2ddddfe7c8a5b6e23adbc2ec0") version("0.24.0", sha256="481811d35b3bbc07e9a60e2f853b05ef26581b43be9c6c4bab81151b8dcadd93") version("0.23.0", sha256="0f0cca01b37bf46fce90d2e951df609d3d377908aa607825083fd0c47cc24753") diff --git a/var/spack/repos/builtin/packages/r-nmof/package.py b/var/spack/repos/builtin/packages/r-nmof/package.py index 52dcda0ebd..a19a76d260 100644 --- a/var/spack/repos/builtin/packages/r-nmof/package.py +++ b/var/spack/repos/builtin/packages/r-nmof/package.py @@ -19,6 +19,7 @@ class RNmof(RPackage): cran = "NMOF" + version("2.8-0", sha256="6dc53a9be41e673e9b2fcb2783aa82090db5455f079b8aac4c388d679f6ec28a") version("2.7-1", sha256="b03e309df35b3fb0980c8a171e1cd1c69739fa6ab7a8992c043166fae4644e23") version("2.7-0", sha256="11eeda730262418f22d24d8f72d363a05ac4c3c1130b88f4eafb1b8d81c83160") version("2.5-1", sha256="0468ba72364cbdf90781824dfb1a60324203e2248d93cb6f1ffd6eb0d271f390") @@ -27,3 +28,4 @@ class RNmof(RPackage): version("1.6-0", sha256="5484cd43c28aaf23d560c2dde8bcd8dd440a205d2214eb50e02fe0bb42ec2755") depends_on("r@2.14:", type=("build", "run")) + depends_on("r@3.5:", type=("build", "run"), when="@2.8-0:") diff --git a/var/spack/repos/builtin/packages/r-nnet/package.py b/var/spack/repos/builtin/packages/r-nnet/package.py index 63b8c5fc32..7dab7edbf0 100644 --- a/var/spack/repos/builtin/packages/r-nnet/package.py +++ b/var/spack/repos/builtin/packages/r-nnet/package.py @@ -16,6 +16,7 @@ class RNnet(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("7.3-19", sha256="a9241f469270d3b03bbab7dc0d3c6a06a84010af16ba82fd3bd6660b35382ce7") version("7.3-18", sha256="d29aebfb5cb00071eecf754d55db5d474a6fda88860df5c9d31ba89aa8d9e3d0") version("7.3-17", sha256="ee750bb8164aa058edf93823af987ab2c7ec64128dce2abeaae1b7d3661e9a67") version("7.3-14", sha256="5d1b9e9764d74d16c651f18f949aa4e9e2995ba64633cbfa2c6a7355ae30f4af") diff --git a/var/spack/repos/builtin/packages/r-nnls/package.py b/var/spack/repos/builtin/packages/r-nnls/package.py index 3fb292aa7e..e1575760df 100644 --- a/var/spack/repos/builtin/packages/r-nnls/package.py +++ b/var/spack/repos/builtin/packages/r-nnls/package.py @@ -17,4 +17,5 @@ class RNnls(RPackage): license("GPL-2.0-or-later") + version("1.5", sha256="cd70feb286f86f6dead75da693a8f67c9bd3b91eb738e6e6ac659e3b8c7a3452") version("1.4", sha256="0e5d77abae12bc50639d34354f96a8e079408c9d7138a360743b73bd7bce6c1f") diff --git a/var/spack/repos/builtin/packages/r-nonnest2/package.py b/var/spack/repos/builtin/packages/r-nonnest2/package.py index 3899ba0a47..a12129ba5a 100644 --- a/var/spack/repos/builtin/packages/r-nonnest2/package.py +++ b/var/spack/repos/builtin/packages/r-nonnest2/package.py @@ -20,6 +20,7 @@ class RNonnest2(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("0.5-7", sha256="e440c2464b3bd3b452e02583bb280eecba6acecf0f2c04b6b9fe4dcdd128db3e") version("0.5-5", sha256="027f510e322122fc75c936251a95ddd392f96047ac86e0fae6cf8f883ac7aab5") depends_on("r@3.0.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-nor1mix/package.py b/var/spack/repos/builtin/packages/r-nor1mix/package.py index 2f6b7907c3..6e2747be40 100644 --- a/var/spack/repos/builtin/packages/r-nor1mix/package.py +++ b/var/spack/repos/builtin/packages/r-nor1mix/package.py @@ -19,5 +19,6 @@ class RNor1mix(RPackage): license("GPL-2.0-or-later") + version("1.3-3", sha256="97bfd0f8c847fa68bf607aaa465845a34ac8a7a262315073026a6a1937dd076e") version("1.3-0", sha256="9ce4ee92f889a4a4041b5ea1ff09396780785a9f12ac46f40647f74a37e327a0") version("1.2-3", sha256="435e6519e832ef5229c51ccb2619640e6b50dfc7470f70f0c938d18a114273af") diff --git a/var/spack/repos/builtin/packages/r-openssl/package.py b/var/spack/repos/builtin/packages/r-openssl/package.py index be058a5549..eb061bf5d4 100644 --- a/var/spack/repos/builtin/packages/r-openssl/package.py +++ b/var/spack/repos/builtin/packages/r-openssl/package.py @@ -24,6 +24,7 @@ class ROpenssl(RPackage): license("MIT") + version("2.2.1", sha256="25a12328d584212d8d4c095b3d2a71152c5d2bc4adda7a9addb25da01136f78d") version("2.0.6", sha256="77f3032a16270f0d1734f269b8d348eedc75b277812854386091143082c1b3f3") version("2.0.4", sha256="a1a5c65127c20c0ca3b46f2c4f4d3817276a887a231569537c1373e7740a5cec") version("2.0.3", sha256="7cde98520bec857f043fb6aae92334e2ae0dcd86108adc9b18ca298ec16286aa") diff --git a/var/spack/repos/builtin/packages/r-openxlsx/package.py b/var/spack/repos/builtin/packages/r-openxlsx/package.py index d9a311a07d..dfcb39680d 100644 --- a/var/spack/repos/builtin/packages/r-openxlsx/package.py +++ b/var/spack/repos/builtin/packages/r-openxlsx/package.py @@ -18,6 +18,7 @@ class ROpenxlsx(RPackage): license("MIT") + version("4.2.6.1", sha256="c208c506a5d6a1d89a18c2b0bedceb467a461939128f2d7916efbf41e7a17aa9") version("4.2.5.2", sha256="ee7089e7e5832ef22ee0d0eebf7cca5096ce23afb2bcdb58700be62526fc9b67") version("4.2.5.1", sha256="64d224380809d8d19788b02daf9d6dae45262594b81f5e013d37d34daf0945c8") version("4.2.5", sha256="65d06d2819b656ac30fc78437ee712a83fb5a7ab750f56268e5c9e578c582519") diff --git a/var/spack/repos/builtin/packages/r-optimx/package.py b/var/spack/repos/builtin/packages/r-optimx/package.py index b079c0226c..de159d7b64 100644 --- a/var/spack/repos/builtin/packages/r-optimx/package.py +++ b/var/spack/repos/builtin/packages/r-optimx/package.py @@ -22,10 +22,15 @@ class ROptimx(RPackage): license("GPL-2.0-only") + version( + "2023-10.21", sha256="0d732d5604c26af59cfb95b80ed4e226c9c10422e2d82a6cc06b92f9ba6a44b5" + ) version("2022-4.30", sha256="ebe9887a22296cf4b2db07981aaa1f898bf7c17fb61a4b398c228d4077d0b410") version( "2021-10.12", sha256="39384c856b5efa3992cd230548b60eff936d428111ad6ad5b8fb98a3bcbb7943" ) version("2020-4.2", sha256="6381c25c322287fc98ab1b2965d3f68c9a92c587c76aca1d33fd6428b2167101") + depends_on("r-nloptr", type=("build", "run"), when="@2023-10.21:") depends_on("r-numderiv", type=("build", "run")) + depends_on("r-pracma", type=("build", "run"), when="@2023-10.21:") diff --git a/var/spack/repos/builtin/packages/r-optparse/package.py b/var/spack/repos/builtin/packages/r-optparse/package.py index 90ab226ce4..6e8cb4c2ea 100644 --- a/var/spack/repos/builtin/packages/r-optparse/package.py +++ b/var/spack/repos/builtin/packages/r-optparse/package.py @@ -17,6 +17,7 @@ class ROptparse(RPackage): license("GPL-2.0-or-later") + version("1.7.5", sha256="0cc917505780786e69b8ceca4b3840ed7b0c011495108ec05af3871965415712") version("1.7.3", sha256="6287e1af051d4a65037900ce7b30bd962039450dd4eab63b6f2491eace6a07ed") version("1.7.1", sha256="324e304c13efd565d766766193d4ccd75e2cd949dfcfb416afc3939489071fe7") version("1.6.6", sha256="51779d497146e9354b1153713d939e81551e08948c2b00e4b117b1377c0b60d0") diff --git a/var/spack/repos/builtin/packages/r-ordinal/package.py b/var/spack/repos/builtin/packages/r-ordinal/package.py index 6e7cc27573..702e439b1b 100644 --- a/var/spack/repos/builtin/packages/r-ordinal/package.py +++ b/var/spack/repos/builtin/packages/r-ordinal/package.py @@ -26,6 +26,9 @@ class ROrdinal(RPackage): license("GPL-2.0-or-later") version( + "2023.12-4.1", sha256="2c9dcfa438c964ff1825033d0759d25f404a2a4c5252b81e40f19cffc18e38b1" + ) + version( "2022.11-16", sha256="5488ad1dfa531a09d017d68d7393d376c8bc49cceeaa6a3e5f7d57b99168d493" ) version( diff --git a/var/spack/repos/builtin/packages/r-osqp/package.py b/var/spack/repos/builtin/packages/r-osqp/package.py index a02f97fe44..22077432ac 100644 --- a/var/spack/repos/builtin/packages/r-osqp/package.py +++ b/var/spack/repos/builtin/packages/r-osqp/package.py @@ -18,10 +18,12 @@ class ROsqp(RPackage): license("Apache-2.0 OR custom") + version("0.6.3.3", sha256="ff3d8e4ec7764333144d461eb5ea7a4adbf5b5f29f84c3ec3e60a93802e2f5bb") version("0.6.0.8", sha256="14034045ae4ae5ec4eae4944653d41d94282fa85a0cd53614ac86f34fd02ed97") version("0.6.0.7", sha256="ee6584d02341e3f1d8fab3b2cb93defd6c48d561297d82a6bedb3e7541868203") depends_on("r-rcpp@0.12.14:", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) + depends_on("r-matrix@1.6-1:", type=("build", "run"), when="@0.6.3:") depends_on("r-r6", type=("build", "run")) depends_on("cmake", type="build") diff --git a/var/spack/repos/builtin/packages/r-packrat/package.py b/var/spack/repos/builtin/packages/r-packrat/package.py index f62071662e..55110d1834 100644 --- a/var/spack/repos/builtin/packages/r-packrat/package.py +++ b/var/spack/repos/builtin/packages/r-packrat/package.py @@ -17,6 +17,7 @@ class RPackrat(RPackage): license("GPL-2.0-only") + version("0.9.2", sha256="69df5943257e6c4d06f3d907241b668b53dedece72158ca935260b8b8e1672d7") version("0.9.1", sha256="414013c6044d2985e69bbc8494c152716b6f81ca15b329c731cfe8f965fd3344") version("0.8.1", sha256="45db0301fa6a0a6944b070ac219cd1fa754bac24e517e59758cdc51e8aed23da") version("0.8.0", sha256="3025b9052974bec00fb09299226b80004d48e611e15a65e5a0bc49d3538844ef") diff --git a/var/spack/repos/builtin/packages/r-paleotree/package.py b/var/spack/repos/builtin/packages/r-paleotree/package.py index 48507c3653..0f8149cfac 100644 --- a/var/spack/repos/builtin/packages/r-paleotree/package.py +++ b/var/spack/repos/builtin/packages/r-paleotree/package.py @@ -17,6 +17,7 @@ class RPaleotree(RPackage): license("CC0-1.0") + version("3.4.7", sha256="cb28c8a7929905b50094439423b7839174f7ae1b652607583528d44e102f6317") version("3.4.5", sha256="c4dceb3352b74730643aa9f62ceb7f020ce6763614ba334723aadf0eb003d125") version("3.4.4", sha256="8809c3395e6904669db8c7cc3b54dd5c3c76948c8568d310cf02e4a5dbc678e4") version("3.3.25", sha256="aa64b9120075581229439227a12db776d052b03eb5f9721692a16a9402ac8712") diff --git a/var/spack/repos/builtin/packages/r-pamr/package.py b/var/spack/repos/builtin/packages/r-pamr/package.py index b16f865fbb..4883fa47bb 100644 --- a/var/spack/repos/builtin/packages/r-pamr/package.py +++ b/var/spack/repos/builtin/packages/r-pamr/package.py @@ -15,9 +15,11 @@ class RPamr(RPackage): license("GPL-2.0-only") + version("1.57", sha256="01968f7620f1a5e4be1ce666f7ff52211b9dcf6cf5948112c7441aabae56af3d") version("1.56.1", sha256="d0e527f2336ee4beee91eefb2a8f0dfa96413d9b5a5841d6fc7ff821e67c9779") version("1.55", sha256="ed910194937a6097ec79234d84777856fd520b111a7c79f7c86dc607169cc3c3") depends_on("r@2.10:", type=("build", "run")) + depends_on("r@3.5:", type=("build", "run"), when="@1.57:") depends_on("r-cluster", type=("build", "run")) depends_on("r-survival", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-pan/package.py b/var/spack/repos/builtin/packages/r-pan/package.py index c50d192d00..a44741afc8 100644 --- a/var/spack/repos/builtin/packages/r-pan/package.py +++ b/var/spack/repos/builtin/packages/r-pan/package.py @@ -20,5 +20,8 @@ class RPan(RPackage): license("GPL-3.0-only") + version("1.9", sha256="cd91232d653783ea7f34c0eebaa80c472b5501b21eea500c4c1a8e57116c6eea") version("1.6", sha256="adc0df816ae38bc188bce0aef3aeb71d19c0fc26e063107eeee71a81a49463b6") version("1.4", sha256="e6a83f0799cc9714f5052f159be6e82ececd013d1626f40c828cda0ceb8b76dc") + + depends_on("r@2.10:", when="@1.9:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-parallelly/package.py b/var/spack/repos/builtin/packages/r-parallelly/package.py index ad333a9de4..ca52c9bb82 100644 --- a/var/spack/repos/builtin/packages/r-parallelly/package.py +++ b/var/spack/repos/builtin/packages/r-parallelly/package.py @@ -24,6 +24,7 @@ class RParallelly(RPackage): license("LGPL-2.1-or-later") + version("1.38.0", sha256="632c823c64d1bb840b2a5ff2cb2f5ffc743d62d5090a3cde55a2ebdde230d1aa") version("1.35.0", sha256="3f5e9b6507196aab052c5e67f8b524b75aa356731c5eaffbadde76c967ad5dcd") version("1.32.1", sha256="31c685f59ac7ff702fe2720910780378113adf0df0baf048a62eef94524cca90") version("1.31.1", sha256="40c7fc3d842fa928448e574091a521bead2367bf97545c744ca78ea9af3117da") diff --git a/var/spack/repos/builtin/packages/r-party/package.py b/var/spack/repos/builtin/packages/r-party/package.py index 4c0783c34c..adb388f567 100644 --- a/var/spack/repos/builtin/packages/r-party/package.py +++ b/var/spack/repos/builtin/packages/r-party/package.py @@ -30,6 +30,7 @@ class RParty(RPackage): license("GPL-2.0-only") + version("1.3-17", sha256="f0e076b1e743cf50274b57d3a69526461fac5e499fc33d73825f293076f27d4b") version("1.3-13", sha256="def05e7f0c59f1b1ecf0ab3929cff75ae8c2691aaf52292cad4371281b897e7b") version("1.3-11", sha256="3ea41a1775d40bc6d0bdf657b98d939d99f98925ac985a31c969735c56618c9c") version("1.3-10", sha256="e5892955f6ce662ade568e646d1d672c3ecbf5d4e74b4a887a353e6160f7b56a") diff --git a/var/spack/repos/builtin/packages/r-partykit/package.py b/var/spack/repos/builtin/packages/r-partykit/package.py index c65bd967e3..aa34561687 100644 --- a/var/spack/repos/builtin/packages/r-partykit/package.py +++ b/var/spack/repos/builtin/packages/r-partykit/package.py @@ -25,6 +25,7 @@ class RPartykit(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("1.2-22", sha256="0f0015aa970b10a85d1fabfd2fcf35a6552e292fe151766e348c105f7f5c0adb") version("1.2-20", sha256="63509aa3ed2d7417ad284c037cef66bc837fdb7a97967957e79b9fee8ed2e0da") version("1.2-16", sha256="e643d4e29c1894497e3dd5fe274783319d0044dec50282ed807cebc21736ddb2") version("1.2-15", sha256="b2e9454b2f4b9a39c9581c5871462f00acef4eeee5696ce3e32cfa1468d1e3ac") diff --git a/var/spack/repos/builtin/packages/r-patchwork/package.py b/var/spack/repos/builtin/packages/r-patchwork/package.py index 96b701585f..f025aa8e9f 100644 --- a/var/spack/repos/builtin/packages/r-patchwork/package.py +++ b/var/spack/repos/builtin/packages/r-patchwork/package.py @@ -20,8 +20,11 @@ class RPatchwork(RPackage): license("MIT") + version("1.2.0", sha256="cc31ea13560c424de9bfe2287d926a7d9e6cc8da2d5561402bb145b4f51b68a1") version("1.1.2", sha256="dab9d5d2d704d591717eaa6efeacf09cb6cd7bee2ca2c46d18414e8503ac8977") version("1.1.1", sha256="cf0d7d9f92945729b499d6e343441c55007d5b371206d5389b9e5154dc7cf481") depends_on("r-ggplot2@3.0.0:", type=("build", "run")) depends_on("r-gtable", type=("build", "run")) + depends_on("r-cli", type=("build", "run"), when="@1.1.3:") + depends_on("r-rlang", type=("build", "run"), when="@1.1.3:") diff --git a/var/spack/repos/builtin/packages/r-pbapply/package.py b/var/spack/repos/builtin/packages/r-pbapply/package.py index 070035aca8..221fc29544 100644 --- a/var/spack/repos/builtin/packages/r-pbapply/package.py +++ b/var/spack/repos/builtin/packages/r-pbapply/package.py @@ -19,6 +19,7 @@ class RPbapply(RPackage): license("GPL-2.0-or-later") + version("1.7-2", sha256="aeed8c8c308c7e3827daf10b01b8ed4b88c1d68cea57d72d67c600c0ce0dae13") version("1.7-0", sha256="64b8e931e0a09031c20b66173ce80a646043b8f135d329bc86226a11c6b706c0") version("1.5-0", sha256="effdfee286e5ba9534dc2ac3cee96590a37f5cd2af28c836d00c25ca9f070a55") version("1.4-3", sha256="8fe6287535be766b5a688810e2cc1ca4e668ac6b42b6e832473fe5701133eb21") diff --git a/var/spack/repos/builtin/packages/r-pbdzmq/package.py b/var/spack/repos/builtin/packages/r-pbdzmq/package.py index c3ee4bbac8..95da65e1e9 100644 --- a/var/spack/repos/builtin/packages/r-pbdzmq/package.py +++ b/var/spack/repos/builtin/packages/r-pbdzmq/package.py @@ -22,6 +22,7 @@ class RPbdzmq(RPackage): license("GPL-3.0-or-later") + version("0.3-11", sha256="da7e204d857370201f75a05fbd808a2f409d440cc96855bb8f48f4a5dd75405b") version("0.3-9", sha256="d033238d0a9810581f6b40c7c75263cfc495a585653bbff98e957c37954e0fb6") version("0.3-8", sha256="eded4ccf6ee54a59e06061f1c6e67a8ec36e03c6ab2318af64446d8f95505465") version("0.3-7", sha256="df2d2be14b2f57a64d76cdda4c01fd1c3d9aa12221c63524c01c71849df11808") diff --git a/var/spack/repos/builtin/packages/r-pbkrtest/package.py b/var/spack/repos/builtin/packages/r-pbkrtest/package.py index 912c6de655..9dba98bf8c 100644 --- a/var/spack/repos/builtin/packages/r-pbkrtest/package.py +++ b/var/spack/repos/builtin/packages/r-pbkrtest/package.py @@ -24,6 +24,7 @@ class RPbkrtest(RPackage): license("GPL-2.0-or-later") + version("0.5.3", sha256="b03e5156fef6a4a2ea67c1d15c051799e63acafef2f89962c580645266e6ba63") version("0.5.2", sha256="8e79adf035a0fcf3c82145ad55847497379e009f7be880ba3007ebeb2e69b6e3") version("0.5.1", sha256="b2a3452003d93890f122423b3f2487dcb6925440f5b8a05578509e98b6aec7c5") version("0.5-0.1", sha256="f56525488c6efe4a5cbf849bf9a82747041478605b166c29bad54e464e46f469") @@ -35,12 +36,14 @@ class RPbkrtest(RPackage): depends_on("r@3.2.3:", type=("build", "run"), when="@0.4-6:") depends_on("r@3.5.0:", type=("build", "run"), when="@0.5-0.1:") depends_on("r@4.1.0:", type=("build", "run"), when="@0.5.2:") + depends_on("r@4.2.0:", type=("build", "run"), when="@0.5.3:") depends_on("r-lme4@1.1-10:", type=("build", "run")) depends_on("r-lme4@1.1-31:", type=("build", "run"), when="@0.5.2:") depends_on("r-broom", type=("build", "run"), when="@0.5-0.1:") + depends_on("r-doby", type=("build", "run"), when="@0.5.3:") depends_on("r-dplyr", type=("build", "run"), when="@0.5-0.1:") depends_on("r-mass", type=("build", "run")) - depends_on("r-matrix@1.2.3:", type=("build", "run")) + depends_on("r-matrix@1.2-3:", type=("build", "run")) depends_on("r-numderiv", type=("build", "run"), when="@0.5-0.1:") depends_on("r-knitr", type=("build", "run"), when="@0.5-0.1:0.5.1") depends_on("r-magrittr", type=("build", "run"), when="@0.5-0.1:0.5.1") diff --git a/var/spack/repos/builtin/packages/r-pcapp/package.py b/var/spack/repos/builtin/packages/r-pcapp/package.py index 536c2e65da..7a362a7396 100644 --- a/var/spack/repos/builtin/packages/r-pcapp/package.py +++ b/var/spack/repos/builtin/packages/r-pcapp/package.py @@ -16,6 +16,7 @@ class RPcapp(RPackage): cran = "pcaPP" + version("2.0-5", sha256="674faed967016a19f9d927506d6b3f4fc7ff2b2ab5679b2368429ee2c61b7c10") version("2.0-3", sha256="1aac554f039753bf9d026090e47d66b82bf3f1f75479ed0adefa3f7bbb55d603") version("2.0-2", sha256="a18b66974e0bfa5af6505acd777d04fd605b32f06009073488ee2f44280bb54b") version("2.0-1", sha256="9690e2f263162452d5a14bd8c52264cb70b317d30907411af4e5b6df4086121a") @@ -28,4 +29,5 @@ class RPcapp(RPackage): version("1.9-60", sha256="9a4b471957ac39ed7c860e3165bf8e099b5b55cf814654adb58f9d19df2718e7") version("1.9-50", sha256="137637314fba6e11883c63b0475d8e50aa7f363e064baa1e70245f7692565b56") + depends_on("r@3.6.2:", type=("build", "run"), when="@2.0-4:") depends_on("r-mvtnorm", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-pegas/package.py b/var/spack/repos/builtin/packages/r-pegas/package.py index c60f86f2bc..955281e810 100644 --- a/var/spack/repos/builtin/packages/r-pegas/package.py +++ b/var/spack/repos/builtin/packages/r-pegas/package.py @@ -22,6 +22,7 @@ class RPegas(RPackage): license("GPL-2.0-or-later") + version("1.3", sha256="103eb2b29d70e71315809421abdf6f2e8ada9c466469c6e3e7cc0314b9cd3dc8") version("1.2", sha256="9d39f3937c09ea6e2189949a23879bb366f5ca1df3a6aac411c7d2b73837ad55") version("1.1", sha256="87ba91a819496dfc3abdcc792ff853a6d49caae6335598a24c23e8851505ed59") version("0.14", sha256="7df90e6c4a69e8dbed2b3f68b18f1975182475bf6f86d4159256b52fd5332053") diff --git a/var/spack/repos/builtin/packages/r-permute/package.py b/var/spack/repos/builtin/packages/r-permute/package.py index 28e7110394..3b23775f41 100644 --- a/var/spack/repos/builtin/packages/r-permute/package.py +++ b/var/spack/repos/builtin/packages/r-permute/package.py @@ -25,4 +25,4 @@ class RPermute(RPackage): version("0.9-5", sha256="d2885384a07497e8df273689d6713fc7c57a7c161f6935f3572015e16ab94865") version("0.9-4", sha256="a541a5f5636ddd67fd856d3e11224f15bc068e96e23aabe3e607a7e7c2fc1cf1") - depends_on("r@2.14:", type=("build", "run")) + depends_on("r@2.14.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-philentropy/package.py b/var/spack/repos/builtin/packages/r-philentropy/package.py index 3bca7876a3..f8d68c8e47 100644 --- a/var/spack/repos/builtin/packages/r-philentropy/package.py +++ b/var/spack/repos/builtin/packages/r-philentropy/package.py @@ -22,6 +22,7 @@ class RPhilentropy(RPackage): license("GPL-2.0-only") + version("0.8.0", sha256="3aa6d4918168f4fe2c56ea3f26381b0ffc02f1d5b9b95e294bac1a34bf66be3e") version("0.7.0", sha256="ce72e2327aee80aeeb630caa33be6a35e4f2b8a7491842d8c21099b9c43584b7") version("0.6.0", sha256="138acf2aedab17c9d367def378e35c8aba80d9e786284b2866955cea1c24eeb6") version("0.5.0", sha256="b39e9a825458f3377e23b2a133180566780e89019e9d22a6a5b7ca87c49c412f") diff --git a/var/spack/repos/builtin/packages/r-phylobase/package.py b/var/spack/repos/builtin/packages/r-phylobase/package.py index 6ef5f16f86..877479fdf8 100644 --- a/var/spack/repos/builtin/packages/r-phylobase/package.py +++ b/var/spack/repos/builtin/packages/r-phylobase/package.py @@ -16,6 +16,7 @@ class RPhylobase(RPackage): license("GPL-2.0-or-later") + version("0.8.12", sha256="9b81ca60dc6215e74b720880cc2db3abc1f7e6d8785ea7d7df95a950f0778f20") version("0.8.10", sha256="5a44380ff49bab333a56f6f96157324ade8afb4af0730e013194c4badb0bf94b") depends_on("r-ade4", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-phytools/package.py b/var/spack/repos/builtin/packages/r-phytools/package.py index 894bf1daae..fbe68ae74b 100644 --- a/var/spack/repos/builtin/packages/r-phytools/package.py +++ b/var/spack/repos/builtin/packages/r-phytools/package.py @@ -32,6 +32,7 @@ class RPhytools(RPackage): license("GPL-2.0-or-later") + version("2.3-0", sha256="973020a695be3fef94a37d7d6732d9352b66e44d30feb554d267b6aeb646d081") version("1.5-1", sha256="f8be59abbff1f5032be4523c361da53b0d5b71677fedebba6d7cbae2dca7e101") version("1.2-0", sha256="ba3c684118c0eaab4601b21988c553ce7ee019df1714d2ac8d4451075f843b86") version("1.0-3", sha256="bfe2aec6aae8235264c1494eee42be494fed81a676c6de9e39c57a6e3682b37d") @@ -48,6 +49,7 @@ class RPhytools(RPackage): depends_on("r-clustergeneration", type=("build", "run")) depends_on("r-coda", type=("build", "run")) depends_on("r-combinat", type=("build", "run")) + depends_on("r-deoptim", type=("build", "run"), when="@2.2-0:") depends_on("r-doparallel", type=("build", "run"), when="@1.5-1:") depends_on("r-expm", type=("build", "run")) depends_on("r-foreach", type=("build", "run"), when="@1.5-1:") @@ -57,8 +59,8 @@ class RPhytools(RPackage): depends_on("r-numderiv", type=("build", "run")) depends_on("r-optimparallel", type=("build", "run"), when="@1.2-0:") depends_on("r-phangorn@2.3.1:", type=("build", "run")) - depends_on("r-plotrix", type=("build", "run")) depends_on("r-scatterplot3d", type=("build", "run")) depends_on("r-animation", type=("build", "run"), when="@:0.6-99") depends_on("r-gtools", type=("build", "run"), when="@0.6-99:0.7-70") + depends_on("r-plotrix", type=("build", "run"), when="@:2.0-2") diff --git a/var/spack/repos/builtin/packages/r-pinfsc50/package.py b/var/spack/repos/builtin/packages/r-pinfsc50/package.py index 2c0808598c..c2f91b8d1d 100644 --- a/var/spack/repos/builtin/packages/r-pinfsc50/package.py +++ b/var/spack/repos/builtin/packages/r-pinfsc50/package.py @@ -21,6 +21,7 @@ class RPinfsc50(RPackage): license("GPL-2.0-or-later") + version("1.3.0", sha256="971627cf4567fdb34db26010f2db44cfac5ff07f327d3247e778638cc4e849bf") version("1.2.0", sha256="ed1fe214b9261feef8abfbf724c2bd9070d68e99a6ea95208aff2c57bbef8794") depends_on("r@3.2.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-pixmap/package.py b/var/spack/repos/builtin/packages/r-pixmap/package.py index 25158831a2..b8a1808f4d 100644 --- a/var/spack/repos/builtin/packages/r-pixmap/package.py +++ b/var/spack/repos/builtin/packages/r-pixmap/package.py @@ -16,5 +16,6 @@ class RPixmap(RPackage): license("GPL-2.0-only") + version("0.4-13", sha256="e3dbc641a0497575b45a4140dadc6bf43cdf39b02393f93f1b0ee4f4d026e711") version("0.4-12", sha256="893ba894d4348ba05e6edf9c1b4fd201191816b444a214f7a6b2c0a79b0a2aec") version("0.4-11", sha256="6fa010749a59cdf56aad9f81271473b7d55697036203f2cd5d81372bcded7412") diff --git a/var/spack/repos/builtin/packages/r-pkgbuild/package.py b/var/spack/repos/builtin/packages/r-pkgbuild/package.py index 9289da8fb7..35498c04a8 100644 --- a/var/spack/repos/builtin/packages/r-pkgbuild/package.py +++ b/var/spack/repos/builtin/packages/r-pkgbuild/package.py @@ -17,6 +17,7 @@ class RPkgbuild(RPackage): license("MIT") + version("1.4.4", sha256="5972843cd43654715cdbdd28f50af013fa3d1c213146654992b2b5f39ed0e2a8") version("1.4.0", sha256="357f3c40c99650eaa8a715991ff1355a553acb165f217ed204712f698ba55ed6") version("1.3.1", sha256="7c6a82d1e6b19e136a7d16095743c50cd7b6340eeda594e4a8e14d74972ddb48") version("1.2.0", sha256="2e19308d3271fefd5e118c6d132d6a2511253b903620b5417892c72d2010a963") @@ -26,15 +27,17 @@ class RPkgbuild(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@1.4.0:") + depends_on("r@3.5:", type=("build", "run"), when="@1.4.3:") depends_on("r-callr@2.0.0:", type=("build", "run")) depends_on("r-callr@3.2.0:", type=("build", "run"), when="@1.0.4:") depends_on("r-cli", type=("build", "run")) depends_on("r-cli@3.4.0:", type=("build", "run"), when="@1.4.0:") - depends_on("r-crayon", type=("build", "run")) depends_on("r-desc", type=("build", "run")) - depends_on("r-prettyunits", type=("build", "run")) depends_on("r-processx", type=("build", "run"), when="@1.4.0:") depends_on("r-r6", type=("build", "run")) - depends_on("r-rprojroot", type=("build", "run")) - depends_on("r-withr@2.1.2:", type=("build", "run")) - depends_on("r-withr@2.3.0:", type=("build", "run"), when="@1.3.1:") + + depends_on("r-crayon", type=("build", "run"), when="@:1.4.2") + depends_on("r-prettyunits", type=("build", "run"), when="@:1.4.2") + depends_on("r-rprojroot", type=("build", "run"), when="@:1.4.2") + depends_on("r-withr@2.1.2:", type=("build", "run"), when="@:1.4.0") + depends_on("r-withr@2.3.0:", type=("build", "run"), when="@1.3.1:1.4.0") diff --git a/var/spack/repos/builtin/packages/r-pkgcache/package.py b/var/spack/repos/builtin/packages/r-pkgcache/package.py index 4f7db9e75b..33d28cf77c 100644 --- a/var/spack/repos/builtin/packages/r-pkgcache/package.py +++ b/var/spack/repos/builtin/packages/r-pkgcache/package.py @@ -17,6 +17,7 @@ class RPkgcache(RPackage): license("MIT") + version("2.2.2", sha256="7ebd6cc5fc0325eae504877dfe9651f90e51b3b9778cecc8aae2671b617b5be3") version("2.1.0", sha256="cfc03c2060028097972c32c3f2d922d7a598dfd963e5e5250d85a3dfa2f2e206") version("2.0.3", sha256="80deafd60f15dda029536d4ce13c37ef91c49cb6636323daadbf3d64a67da028") version("2.0.2", sha256="6860b5b7046ef349c2fdad4ba3aecb57c7516fba952a19e3ff7cccb7f859f881") @@ -31,10 +32,8 @@ class RPkgcache(RPackage): depends_on("r-curl@3.2:", type=("build", "run")) depends_on("r-filelock", type=("build", "run")) depends_on("r-jsonlite", type=("build", "run")) - depends_on("r-prettyunits", type=("build", "run")) depends_on("r-r6", type=("build", "run")) depends_on("r-processx@3.3.0.9001:", type=("build", "run")) - depends_on("r-rappdirs", type=("build", "run")) depends_on("r-assertthat", type=("build", "run"), when="@:1.3.0") depends_on("r-digest", type=("build", "run"), when="@:1.3.0") @@ -42,3 +41,5 @@ class RPkgcache(RPackage): depends_on("r-tibble", type=("build", "run"), when="@:1.3.0") depends_on("r-uuid", type=("build", "run"), when="@:1.3.0") depends_on("r-glue", type=("build", "run"), when="@:2.0.2") + depends_on("r-prettyunits", type=("build", "run"), when="@:2.2.0") + depends_on("r-rappdirs", type=("build", "run"), when="@:2.2.0") diff --git a/var/spack/repos/builtin/packages/r-pkgdepends/package.py b/var/spack/repos/builtin/packages/r-pkgdepends/package.py index 73ba6e593b..fc85a9557a 100644 --- a/var/spack/repos/builtin/packages/r-pkgdepends/package.py +++ b/var/spack/repos/builtin/packages/r-pkgdepends/package.py @@ -22,34 +22,38 @@ class RPkgdepends(RPackage): license("MIT") + version("0.7.2", sha256="b17e22d01250916b06868317359239ca9273d7765b5ead9481b47cf0d96acd26") version("0.5.0", sha256="eadc98e335f9d2cc10b31cf7a5b55fe3308266fbd6f46d5dbd37b5d90bfcf1bc") version("0.3.2", sha256="61db529965f973847b4d1337c6556527a89953cad09d231a6e6ca2145a426a21") version("0.3.1", sha256="8e4263a1792871ee9629b0d6a8caeb53b77012db3b5be91b432f3553cd2a80be") version("0.2.0", sha256="59afdbe0e59663088ba4facac5cd011a0a05b0b9c540103fb8b9f0a673bf4d94") depends_on("r@3.4:", type=("build", "run"), when="@0.3.1:") + depends_on("r@3.5:", type=("build", "run"), when="@0.7.0:") depends_on("r-callr@3.3.1:", type=("build", "run")) depends_on("r-cli@2.1.0:", type=("build", "run")) depends_on("r-cli@3.6.0:", type=("build", "run"), when="@0.5.0:") depends_on("r-curl", type=("build", "run")) depends_on("r-desc@1.2.0:", type=("build", "run")) + depends_on("r-desc@1.4.3:", type=("build", "run"), when="@0.7.1:") depends_on("r-filelock@1.0.2:", type=("build", "run")) - depends_on("r-glue", type=("build", "run")) depends_on("r-jsonlite", type=("build", "run")) depends_on("r-lpsolve", type=("build", "run")) depends_on("r-pkgbuild@1.0.2:", type=("build", "run")) depends_on("r-pkgcache@1.3.0:", type=("build", "run")) depends_on("r-pkgcache@2.0.0:", type=("build", "run"), when="@0.3.1:") depends_on("r-pkgcache@2.1.0:", type=("build", "run"), when="@0.5.0:") - depends_on("r-prettyunits@1.1.1:", type=("build", "run")) + depends_on("r-pkgcache@2.2.0:", type=("build", "run"), when="@0.6.0:") depends_on("r-processx@3.4.2:", type=("build", "run")) depends_on("r-ps", type=("build", "run")) depends_on("r-r6", type=("build", "run")) - depends_on("r-rprojroot", type=("build", "run")) - depends_on("r-withr@2.1.1:", type=("build", "run")) depends_on("r-zip@2.1.0:", type=("build", "run")) depends_on("r-zip@2.3.0:", type=("build", "run"), when="@0.5.0:") + depends_on("r-glue", type=("build", "run"), when="@:0.7.0") + depends_on("r-prettyunits@1.1.1:", type=("build", "run"), when="@:0.7.0") + depends_on("r-rprojroot", type=("build", "run"), when="@:0.7.0") + depends_on("r-withr@2.1.1:", type=("build", "run"), when="@:0.5.0") depends_on("r-rematch2", type=("build", "run"), when="@:0.2.0") depends_on("r-tibble", type=("build", "run"), when="@:0.2.0") depends_on("r-crayon", type=("build", "run"), when="@:0.3.2") diff --git a/var/spack/repos/builtin/packages/r-pkgdown/package.py b/var/spack/repos/builtin/packages/r-pkgdown/package.py index 14cb41076c..017b64e160 100644 --- a/var/spack/repos/builtin/packages/r-pkgdown/package.py +++ b/var/spack/repos/builtin/packages/r-pkgdown/package.py @@ -17,29 +17,42 @@ class RPkgdown(RPackage): license("MIT") + version("2.1.0", sha256="c4d1df3b738d66e60db71e57c01c86c46f2fe58f972c9e2403c07a1436279fb4") version("2.0.7", sha256="f33872869dfa8319182d87e90eab3245ff69293b3b791471bf9538afb81b356a") version("2.0.6", sha256="d29a65c8a5b189fd89842e769f58f8c2369a55406269eabfb66d41d0fe1c7f69") depends_on("r@3.1.0:", type=("build", "run")) + depends_on("r@3.6:", type=("build", "run"), when="@2.0.8:") depends_on("r-bslib@0.3.1:", type=("build", "run")) + depends_on("r-bslib@0.5.1:", type=("build", "run"), when="@2.0.8:") depends_on("r-callr@2.0.2:", type=("build", "run")) depends_on("r-callr@3.7.3:", type=("build", "run"), when="@2.0.7:") depends_on("r-cli", type=("build", "run")) + depends_on("r-cli@3.6.1:", type=("build", "run"), when="@2.0.8:") depends_on("r-desc", type=("build", "run")) + depends_on("r-desc@1.4.0:", type=("build", "run"), when="@2.0.8:") depends_on("r-digest", type=("build", "run")) depends_on("r-downlit@0.4.0:", type=("build", "run")) + depends_on("r-downlit@0.4.4:", type=("build", "run"), when="@2.1.0:") + depends_on("r-fontawesome", type=("build", "run"), when="@2.1.0:") depends_on("r-fs@1.4.0:", type=("build", "run")) - depends_on("r-httr@1.4.2:", type=("build", "run")) + depends_on("r-httr2@1.0.0:", type=("build", "run"), when="@2.1.0:") depends_on("r-jsonlite", type=("build", "run")) - depends_on("r-magrittr", type=("build", "run")) - depends_on("r-memoise", type=("build", "run")) + depends_on("r-openssl", type=("build", "run"), when="@2.1.0:") depends_on("r-purrr", type=("build", "run")) + depends_on("r-purrr@1.0.0:", type=("build", "run"), when="@2.0.8:") depends_on("r-ragg", type=("build", "run")) depends_on("r-rlang@1.0.0:", type=("build", "run")) + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@2.0.9:") depends_on("r-rmarkdown@1.1.9007:", type=("build", "run")) + depends_on("r-rmarkdown@2.27:", type=("build", "run"), when="@2.1.0:") depends_on("r-tibble", type=("build", "run")) depends_on("r-whisker", type=("build", "run")) depends_on("r-withr@2.4.3:", type=("build", "run")) depends_on("r-xml2@1.3.1:", type=("build", "run")) depends_on("r-yaml", type=("build", "run")) depends_on("pandoc") + + depends_on("r-httr@1.4.2:", type=("build", "run"), when="@:2.0.9") + depends_on("r-magrittr", type=("build", "run"), when="@:2.0.9") + depends_on("r-memoise", type=("build", "run"), when="@:2.0.9") diff --git a/var/spack/repos/builtin/packages/r-pkgload/package.py b/var/spack/repos/builtin/packages/r-pkgload/package.py index 5d22035a99..3a6b717b95 100644 --- a/var/spack/repos/builtin/packages/r-pkgload/package.py +++ b/var/spack/repos/builtin/packages/r-pkgload/package.py @@ -17,6 +17,7 @@ class RPkgload(RPackage): license("GPL-3.0-only") + version("1.4.0", sha256="09e4885e9cc25af29063a525da0b2ac9dd66fc7a95ea085bf5060312e3a67549") version("1.3.4", sha256="60b04b948cda4dc56257b1e89f9b0a4b1273cacecdb2bd995d66dd76e89926ce") version("1.3.3", sha256="b0898122876479cc4a35cd566654b3a7b50f8ac105565dbf3f8b9d4283816959") version("1.3.2.1", sha256="a1987b123fcbdb9d908b6dc55a04d3cf47d68cfa5090186e4876a429313374b2") @@ -31,10 +32,12 @@ class RPkgload(RPackage): depends_on("r-cli", type=("build", "run"), when="@1.1.0:") depends_on("r-cli@3.3.0:", type=("build", "run"), when="@1.3.0:") - depends_on("r-crayon", type=("build", "run"), when="@1.1.0:") + depends_on("r-crayon", type=("build", "run"), when="@1.1.0:1.3") depends_on("r-desc", type=("build", "run")) depends_on("r-glue", type=("build", "run"), when="@1.3.0:") depends_on("r-fs", type=("build", "run"), when="@1.3.0:") + depends_on("r-lifecycle", type=("build", "run"), when="@1.4.0:") + depends_on("r-processx", type=("build", "run"), when="@1.4.0:") depends_on("r-rlang", type=("build", "run")) depends_on("r-rlang@1.0.3:", type=("build", "run"), when="@1.3.0:1.3.3") depends_on("r-rlang@1.1.1:", type=("build", "run"), when="@1.3.4:") diff --git a/var/spack/repos/builtin/packages/r-pkgmaker/package.py b/var/spack/repos/builtin/packages/r-pkgmaker/package.py index 47efa743ec..af688596a3 100644 --- a/var/spack/repos/builtin/packages/r-pkgmaker/package.py +++ b/var/spack/repos/builtin/packages/r-pkgmaker/package.py @@ -21,6 +21,7 @@ class RPkgmaker(RPackage): license("GPL-2.0-or-later") + version("0.32.10", sha256="972b0473a64408ccc4841fa3f09a567cc32811e69c3c7e42a2f391a5eb2e2933") version("0.32.8", sha256="0ff3578d2c051b544c3f105cfe4801575aac1564add048f9e952c53a8ccd1745") version("0.32.2", sha256="ce45b22def771a9c90a414093823e6befe7e23489c500eeccee5154b44d3ef91") version("0.27", sha256="17a289d8f596ba5637b07077b3bff22411a2c2263c0b7de59fe848666555ec6a") diff --git a/var/spack/repos/builtin/packages/r-pki/package.py b/var/spack/repos/builtin/packages/r-pki/package.py new file mode 100644 index 0000000000..612dbecdbc --- /dev/null +++ b/var/spack/repos/builtin/packages/r-pki/package.py @@ -0,0 +1,22 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RPki(RPackage): + """Public Key Infrastucture functions such as verifying certificates, + RSA encription and signing which can be used to build PKI infrastructure + and perform cryptographic tasks.""" + + homepage = "http://www.rforge.net/PKI" + cran = "PKI" + + license("GPL-2.0-or-later", checked_by="wdconinc") + + version("0.1-14", sha256="c024e81977b978b705460df96639e3369420bd7e8f4f3242ec796255dc1b7966") + + depends_on("r@2.9.0:", type=("build", "run")) + depends_on("r-base64enc", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-plot3d/package.py b/var/spack/repos/builtin/packages/r-plot3d/package.py index 0ba526522a..31a6ed7e75 100644 --- a/var/spack/repos/builtin/packages/r-plot3d/package.py +++ b/var/spack/repos/builtin/packages/r-plot3d/package.py @@ -15,6 +15,7 @@ class RPlot3d(RPackage): cran = "plot3D" + version("1.4.1", sha256="db6df74844dda9177f2be024762b2f0e63182916e987a09480514d078d55d1f4") version("1.4", sha256="d04a45197646fb36bc38870c1c2351cb56b912bd772b1ebfa25eaeef35fda9c0") version("1.3", sha256="b9e4ec2789e34ad249318900e186868650e1a33466b385cb492a45466db3dfc9") version("1.1.1", sha256="f6fe4a001387132626fc553ed1d5720d448b8064eb5a6917458a798e1d381632") diff --git a/var/spack/repos/builtin/packages/r-plotly/package.py b/var/spack/repos/builtin/packages/r-plotly/package.py index 9b266588fd..ba3ba33ad1 100644 --- a/var/spack/repos/builtin/packages/r-plotly/package.py +++ b/var/spack/repos/builtin/packages/r-plotly/package.py @@ -17,6 +17,7 @@ class RPlotly(RPackage): license("MIT") + version("4.10.4", sha256="cfa995b7ed55d31a196707a3ae6ea352dd907cef3058a3bf1956fde39366d867") version("4.10.1", sha256="ac0921a1cba24e17a0f3a0a28b7a40ac930e17fe5caa9c3973c9a8d1e20c367a") version("4.10.0", sha256="bd995c654dbc8c09a84adaba8def99766919e3894caf18b551bb26b2f591389a") version("4.9.3", sha256="d44d1a16d96de28bc2d36f1c897384215eeec44d109546c6e9c2707db0880120") diff --git a/var/spack/repos/builtin/packages/r-plotmo/package.py b/var/spack/repos/builtin/packages/r-plotmo/package.py index de5de683ee..2f0cb89e81 100644 --- a/var/spack/repos/builtin/packages/r-plotmo/package.py +++ b/var/spack/repos/builtin/packages/r-plotmo/package.py @@ -17,6 +17,7 @@ class RPlotmo(RPackage): license("GPL-3.0-only") + version("3.6.3", sha256="6917cd8185325f1f2998fb14def9e6a8d93f1b708cf70d7c443d3960c9189b7b") version("3.6.2", sha256="cde33a8ec558b12d8e11d7d0531e73f6678a25ee589b79897d2fc425a3fd353c") version("3.6.1", sha256="245a0c87f0cca08746c6fdc60da2e3856cd69b1a2b7b5641293c620d4ae04343") version("3.6.0", sha256="c05afcc442f9542868beea5c3c40fb93b049f9b61c42725b2a1e2bc750c241e3") @@ -25,4 +26,5 @@ class RPlotmo(RPackage): depends_on("r@3.4.0:", type=("build", "run")) depends_on("r-formula@1.2-3:", type=("build", "run")) depends_on("r-plotrix", type=("build", "run")) - depends_on("r-teachingdemos", type=("build", "run")) + + depends_on("r-teachingdemos", type=("build", "run"), when="@:3.6.2") diff --git a/var/spack/repos/builtin/packages/r-plotrix/package.py b/var/spack/repos/builtin/packages/r-plotrix/package.py index 9a74b4ceb7..bbeecbe9f3 100644 --- a/var/spack/repos/builtin/packages/r-plotrix/package.py +++ b/var/spack/repos/builtin/packages/r-plotrix/package.py @@ -15,6 +15,7 @@ class RPlotrix(RPackage): license("GPL-2.0-or-later") + version("3.8-4", sha256="e6a22d93ab61c67af21cbbe1fe333c06934cf576a44745bf2beee59bceaae8d6") version("3.8-2", sha256="bb72953102889cea41cd6521874e35d2458ebd10aab97ba6f262e102cac0bc1f") version("3.7-8", sha256="8ccd1f7e656413b9956cea614c986ce9cc61366deba356afb38cee6672a59480") version("3.7-6", sha256="83d5f7574592953288b4fe39c4c0dd7670d097598ad7f6bddbb0687a32954e46") diff --git a/var/spack/repos/builtin/packages/r-pls/package.py b/var/spack/repos/builtin/packages/r-pls/package.py index b5cdc6df15..5990dc2061 100644 --- a/var/spack/repos/builtin/packages/r-pls/package.py +++ b/var/spack/repos/builtin/packages/r-pls/package.py @@ -17,6 +17,7 @@ class RPls(RPackage): license("GPL-2.0-only") + version("2.8-4", sha256="785b1b63639754811bec124fcd46bd821c76611380f49a7555695a2969b3d562") version("2.8-1", sha256="e22e7febeef1a6800b97ee7f6eb03dc1d6681aba7f9298449c9e6375fa78f28c") version("2.8-0", sha256="eff3a92756ca34cdc1661fa36d2bf7fc8e9f4132d2f1ef9ed0105c83594618bf") version("2.7-3", sha256="8f1d960ab74f05fdd11c4c7a3d30ff9e263fc658f5690b67278ca7c045d0742c") diff --git a/var/spack/repos/builtin/packages/r-plyr/package.py b/var/spack/repos/builtin/packages/r-plyr/package.py index e0cd4ca9f3..34387c943f 100644 --- a/var/spack/repos/builtin/packages/r-plyr/package.py +++ b/var/spack/repos/builtin/packages/r-plyr/package.py @@ -21,6 +21,7 @@ class RPlyr(RPackage): license("MIT") + version("1.8.9", sha256="15b5e7f711d53bf41b8687923983b8ef424563aa2f74c5195feb5b1df1aee103") version("1.8.8", sha256="a73211b4bbe13e4e5e764966a8dd90172c1cc311938dd464d142e1c7a701070c") version("1.8.7", sha256="7d9fdaf1157035a49c3661da3bbaa7bfcf782aafe1b98f7b5a68b0520046e87f") version("1.8.6", sha256="ea55d26f155443e9774769531daa5d4c20a0697bb53abd832e891b126c935287") diff --git a/var/spack/repos/builtin/packages/r-pmcmrplus/package.py b/var/spack/repos/builtin/packages/r-pmcmrplus/package.py index 047b2bffa9..e5e76090bf 100644 --- a/var/spack/repos/builtin/packages/r-pmcmrplus/package.py +++ b/var/spack/repos/builtin/packages/r-pmcmrplus/package.py @@ -36,6 +36,7 @@ class RPmcmrplus(RPackage): cran = "PMCMRplus" + version("1.9.10", sha256="d883f897fa26a0bca0ba464dac7b360c6adee2c7867097e91fc7588030ed1f70") version("1.9.6", sha256="7f4791566d7dfaed0883187c52fbb845797ff6a1066e77667683ce96391b72d7") version("1.9.4", sha256="1ec36674bb6d2fac3a1b0889c4672e40849c7e3565ffb34bb73b61f973bba19a") version("1.9.3", sha256="76baba60f57343fa5bb6f6d2ea27aab77178e02b0d2f9d5d74abde7d18994f03") diff --git a/var/spack/repos/builtin/packages/r-polspline/package.py b/var/spack/repos/builtin/packages/r-polspline/package.py index ed627a8781..f773e95621 100644 --- a/var/spack/repos/builtin/packages/r-polspline/package.py +++ b/var/spack/repos/builtin/packages/r-polspline/package.py @@ -17,6 +17,7 @@ class RPolspline(RPackage): license("GPL-2.0-or-later") + version("1.1.25", sha256="2943fc4cd922300afeaa58e6a0e4c21e5a0f7255e6367c7ea6ad136fce1e9ba3") version("1.1.22", sha256="b2f2198f020d7d492a87bad2b58a6cc9ae91d95b7330dd12b9b1145c72d7457b") version("1.1.20", sha256="6992484e9e41036debef1e705e26959f8f5c7a68d3e1fda58273d2a72297a1b5") version("1.1.19", sha256="953e3c4d007c3ef86ac2af3c71b272a99e8e35b194bdd58575785558c6711f66") diff --git a/var/spack/repos/builtin/packages/r-polyclip/package.py b/var/spack/repos/builtin/packages/r-polyclip/package.py index 55c5ff6f81..93eaf4a57e 100644 --- a/var/spack/repos/builtin/packages/r-polyclip/package.py +++ b/var/spack/repos/builtin/packages/r-polyclip/package.py @@ -21,7 +21,9 @@ class RPolyclip(RPackage): license("BSL-1.0") + version("1.10-7", sha256="f58eaac3a5b2f6711c0c5f12fff91cf80a245ae45878f7217880ab062b5550d3") version("1.10-4", sha256="84d2c9778771d3759b49d7d16fb54c8ddc5397da3b1d21074bc4aa42c02e6f56") version("1.10-0", sha256="74dabc0dfe5a527114f0bb8f3d22f5d1ae694e6ea9345912909bae885525d34b") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@1.10-7:") diff --git a/var/spack/repos/builtin/packages/r-pool/package.py b/var/spack/repos/builtin/packages/r-pool/package.py index 56c8ad1226..cb713e9124 100644 --- a/var/spack/repos/builtin/packages/r-pool/package.py +++ b/var/spack/repos/builtin/packages/r-pool/package.py @@ -17,12 +17,16 @@ class RPool(RPackage): license("MIT") + version("1.0.3", sha256="c461f96928c3e524a52018160d2406f3a1f5ef5abbae54ae89fe7ecd4c1a1cec") version("1.0.1", sha256="73d5dffd55e80fdadb88401f12570fcf08e932c4c86761931241f9841fddadbf") version("0.1.6", sha256="cdbe5f6c7f757c01893dc9870df0fb8d300829da0e427f6c2559b01caa52d9e1") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@1.0.2:") depends_on("r-dbi", type=("build", "run")) + depends_on("r-dbi@1.2.1:", type=("build", "run"), when="@1.0.3:") depends_on("r-r6", type=("build", "run")) - depends_on("r-withr", type=("build", "run"), when="@1.0.1:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.0.1:") depends_on("r-later@1.0.0:", type=("build", "run")) + + depends_on("r-withr", type=("build", "run"), when="@1.0.1") diff --git a/var/spack/repos/builtin/packages/r-poorman/package.py b/var/spack/repos/builtin/packages/r-poorman/package.py index ea5c5ac0e4..0994518815 100644 --- a/var/spack/repos/builtin/packages/r-poorman/package.py +++ b/var/spack/repos/builtin/packages/r-poorman/package.py @@ -16,6 +16,7 @@ class RPoorman(RPackage): license("MIT") + version("0.2.7", sha256="089418293cdfde3b46bf53e891a3a8ad924d953a1a7e5ae981de54ebde62b4aa") version("0.2.6", sha256="328e0a3e610f17e845d95cd9c0803e0367d6f5835706e8b0ed921fc500983774") version("0.2.5", sha256="b92b30ce0f4f02c4fa4a4e90673ef2e0ed8de9b9080dd064506581989fcc0716") diff --git a/var/spack/repos/builtin/packages/r-popvar/package.py b/var/spack/repos/builtin/packages/r-popvar/package.py index 90c15fa3cb..c7afc8c5c6 100644 --- a/var/spack/repos/builtin/packages/r-popvar/package.py +++ b/var/spack/repos/builtin/packages/r-popvar/package.py @@ -22,6 +22,7 @@ class RPopvar(RPackage): cran = "PopVar" + version("1.3.1", sha256="adb0f6705b7bb984272db31f8ac6612100f7970aa7d0e5cfdef76124dd33ac98") version("1.3.0", sha256="3145c41c9aa1588d47aaf76c082e6b1c2fd95cf5014b98bd2867cbf2cec782f9") version("1.2.1", sha256="5e3df79634ab63708a431e4b8e6794675972ac6c58d2bc615726aa0f142f5f25") diff --git a/var/spack/repos/builtin/packages/r-posterior/package.py b/var/spack/repos/builtin/packages/r-posterior/package.py index 4d1c9fdc2c..859ad7c799 100644 --- a/var/spack/repos/builtin/packages/r-posterior/package.py +++ b/var/spack/repos/builtin/packages/r-posterior/package.py @@ -23,6 +23,7 @@ class RPosterior(RPackage): license("BSD-3-Clause") + version("1.6.0", sha256="34612a39fb15a8e3ba6ef5c32a041a4b5f77554216dd774563f46db1150bf40c") version("1.4.1", sha256="2b8953fa8d6890a105521023c431ddea725465eb95cf9454a88852e43ebb58d3") version("1.3.1", sha256="7000780290a24be86dbc406dd4338aec622d8dee1e471b68b55abb4872934d7a") version("1.2.1", sha256="b757e06885a1f21e7ad8f5a3feaecbe0a71ae8d766e4aec4c3aa2183a810afe1") diff --git a/var/spack/repos/builtin/packages/r-powerlaw/package.py b/var/spack/repos/builtin/packages/r-powerlaw/package.py index 4c664b9d15..c73409dcbc 100644 --- a/var/spack/repos/builtin/packages/r-powerlaw/package.py +++ b/var/spack/repos/builtin/packages/r-powerlaw/package.py @@ -16,6 +16,7 @@ class RPowerlaw(RPackage): cran = "poweRlaw" + version("0.80.0", sha256="713556af1f47e1de749670d08f963688908cfa80e9dfda590efd1a28441772cb") version("0.70.6", sha256="efc091449c5c6494c1c13c85a8eb95625d1c55ffffebe86c7ea16e4abbafa191") version("0.70.2", sha256="240f1454389b1a00ad483fb63e5b53243cc9367f21a3e7253ab2c293673459ab") version("0.70.1", sha256="15b1b8dadeb550c01b9f1308cfa64720be6fbf56afb80f6a096987d6a0055913") diff --git a/var/spack/repos/builtin/packages/r-prabclus/package.py b/var/spack/repos/builtin/packages/r-prabclus/package.py index 56d94d7ba9..df23c06398 100644 --- a/var/spack/repos/builtin/packages/r-prabclus/package.py +++ b/var/spack/repos/builtin/packages/r-prabclus/package.py @@ -21,11 +21,13 @@ class RPrabclus(RPackage): license("GPL-2.0-or-later") + version("2.3-3", sha256="005d000a9ac357e670de26e5b8fc4ddb1617351275fa43bf6d2e88b8774358c1") version("2.3-2", sha256="f421bcbcb557281e0de4a06b15f9a496adb5c640e883c0f7bb12051efc69e441") version("2.3-1", sha256="ef3294767d43bc3f72478fdaf0d1f13c8de18881bf9040c9f1add68af808b3c0") version("2.2-7.1", sha256="2c5bf3bbb0d225e04c53bb0e11e9c2a6809f0e46d95b8f6dc14b9dd6a2452975") version("2.2-6", sha256="41792980e40ba18204fab92d85120dcd468860e2204e52fb42636c6f7aee5a62") depends_on("r@2.1.0:", type=("build", "run")) + depends_on("r@2.10:", type=("build", "run"), when="@2.2-2:") depends_on("r-mass", type=("build", "run")) depends_on("r-mclust", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-pracma/package.py b/var/spack/repos/builtin/packages/r-pracma/package.py index 2d4858d429..59d54e2132 100644 --- a/var/spack/repos/builtin/packages/r-pracma/package.py +++ b/var/spack/repos/builtin/packages/r-pracma/package.py @@ -18,6 +18,7 @@ class RPracma(RPackage): license("GPL-3.0-or-later") + version("2.4.4", sha256="1a4ef3af2197f999dbaa614bf5a70f09ec463d8c91feb5aa0d995de24ec6ba7f") version("2.4.2", sha256="1d50337fdfd9a8d704a64f01dae5d52b9a2bd6d872fdaa4a6685b8d3bde89c16") version("2.3.8", sha256="2302d454406e72711714732658d0c59c9d5a1ead698f22ee23f38cba63d42764") version("2.3.6", sha256="17ac83fd48c9155e00dc3f0433f95723505dc73d046860afd9001866d699b8de") diff --git a/var/spack/repos/builtin/packages/r-prettyunits/package.py b/var/spack/repos/builtin/packages/r-prettyunits/package.py index b3b317d3f6..8c0503a4eb 100644 --- a/var/spack/repos/builtin/packages/r-prettyunits/package.py +++ b/var/spack/repos/builtin/packages/r-prettyunits/package.py @@ -17,8 +17,11 @@ class RPrettyunits(RPackage): license("MIT") + version("1.2.0", sha256="f059f27e2a5c82e351fe05b87ad712f7afc273c651450453f59d99af5deeacea") version("1.1.1", sha256="9a199aa80c6d5e50fa977bc724d6e39dae1fc597a96413053609156ee7fb75c5") version("1.0.2", sha256="35a4980586c20650538ae1e4fed4d80fdde3f212b98546fc3c7d9469a1207f5c") + depends_on("r@2.10:", type=("build", "run"), when="@1.2.0:") + depends_on("r-magrittr", type=("build", "run"), when="@:1.0.2") depends_on("r-assertthat", type=("build", "run"), when="@:1.0.2") diff --git a/var/spack/repos/builtin/packages/r-proc/package.py b/var/spack/repos/builtin/packages/r-proc/package.py index eb2a3ee026..a89e84c78f 100644 --- a/var/spack/repos/builtin/packages/r-proc/package.py +++ b/var/spack/repos/builtin/packages/r-proc/package.py @@ -16,6 +16,7 @@ class RProc(RPackage): cran = "pROC" + version("1.18.5", sha256="5593c841a6df5a2f2d209d0c14401971eb9427092ed9c3ac2059273807b42c89") version("1.18.0", sha256="d5ef54b384176ece6d6448014ba40570a98181b58fee742f315604addb5f7ba9") version("1.17.0.1", sha256="221c726ffb81b04b999905effccfd3a223cd73cae70d7d86688e2dd30e51a6bd") diff --git a/var/spack/repos/builtin/packages/r-processx/package.py b/var/spack/repos/builtin/packages/r-processx/package.py index cf92432de3..9c1e21cdf8 100644 --- a/var/spack/repos/builtin/packages/r-processx/package.py +++ b/var/spack/repos/builtin/packages/r-processx/package.py @@ -20,6 +20,7 @@ class RProcessx(RPackage): license("MIT") + version("3.8.4", sha256="6627672d7fb109f37dc1d0eaef913f4cfc7ad8ac807abf0397e6d37753b1e70b") version("3.8.1", sha256="e008472b81d4ca1a37a4ba7dd58e5e944f96ab2e44c8ccc8840d43e9fe99e93c") version("3.8.0", sha256="9270d9d26c4314151062801a5c1fc57556b4fcb41dbf3558cb5bd230b18ffb0b") version("3.7.0", sha256="de6a8d4135fc53ec35043fbaf6b000dc9597719345595d8479662a39dad55ed3") diff --git a/var/spack/repos/builtin/packages/r-prodlim/package.py b/var/spack/repos/builtin/packages/r-prodlim/package.py index 617aa47649..86754a10e8 100644 --- a/var/spack/repos/builtin/packages/r-prodlim/package.py +++ b/var/spack/repos/builtin/packages/r-prodlim/package.py @@ -18,6 +18,9 @@ class RProdlim(RPackage): license("GPL-2.0-or-later") version( + "2024.06.25", sha256="46961f654171aa7ef0ff94b23508ed59f6a438c3a3ba0d338cc3730224406764" + ) + version( "2023.03.31", sha256="5510454f8511ca956666f27dfb77d875c56b9166188c33f22cd22b7615797800" ) version( diff --git a/var/spack/repos/builtin/packages/r-profvis/package.py b/var/spack/repos/builtin/packages/r-profvis/package.py index 709aca7e82..787041fb2e 100644 --- a/var/spack/repos/builtin/packages/r-profvis/package.py +++ b/var/spack/repos/builtin/packages/r-profvis/package.py @@ -13,8 +13,12 @@ class RProfvis(RPackage): license("GPL-3.0-only OR custom") + version("0.3.8", sha256="ec02c75bc9907a73564e691adfa8e06651ca0bd73b7915412960231cd265b4b2") version("0.3.7", sha256="43974863cb793f81dbea4b94096343c321f7739c9038980405c9b16b04a906b9") depends_on("r@3.0:", type=("build", "run")) depends_on("r-htmlwidgets@0.3.2:", type=("build", "run")) + depends_on("r-purrr", type=("build", "run"), when="@0.3.8:") + depends_on("r-rlang@0.4.9:", type=("build", "run"), when="@0.3.8:") depends_on("r-stringr", type=("build", "run")) + depends_on("r-vctrs", type=("build", "run"), when="@0.3.8:") diff --git a/var/spack/repos/builtin/packages/r-progress/package.py b/var/spack/repos/builtin/packages/r-progress/package.py index d3f41e6548..dbc314340b 100644 --- a/var/spack/repos/builtin/packages/r-progress/package.py +++ b/var/spack/repos/builtin/packages/r-progress/package.py @@ -18,10 +18,12 @@ class RProgress(RPackage): license("MIT") + version("1.2.3", sha256="ea2b079b894de85c3ab12088c9c52aec06432245047a961d5b4b8aa6889f9276") version("1.2.2", sha256="b4a4d8ed55db99394b036a29a0fb20b5dd2a91c211a1d651c52a1023cc58ff35") version("1.2.1", sha256="7401e86ff76bef4d26508b74ee8bd169a0377b2738d9ec79ebff0b7fd5c55326") version("1.1.2", sha256="a9f4abfd9579b80967cd681041643fe9dfcc4eb3beeba45391bb64e9209baabb") + depends_on("r@3.6:", type=("build", "run"), when="@1.2.3:") depends_on("r-r6", type=("build", "run")) depends_on("r-prettyunits", type=("build", "run")) depends_on("r-hms", type=("build", "run"), when="@1.2.0:") diff --git a/var/spack/repos/builtin/packages/r-progressr/package.py b/var/spack/repos/builtin/packages/r-progressr/package.py index 457a09c4b0..d07c5124e9 100644 --- a/var/spack/repos/builtin/packages/r-progressr/package.py +++ b/var/spack/repos/builtin/packages/r-progressr/package.py @@ -31,6 +31,7 @@ class RProgressr(RPackage): license("GPL-3.0-or-later") + version("0.14.0", sha256="9a2899f879a5577f043be99c18d52bfe4d655cc52a96cae834e8a301b36258af") version("0.13.0", sha256="0ffb3dcadde0cc191bad0ff9e05d000aa65e2fc339cfc94ebbb263088df5a4e1") version("0.11.0", sha256="d8668c82348a20cca34bb18c0c94e6083dbb6dbea40615e07e4161aff7366cd9") version("0.10.1", sha256="8f83024b2a6f52996750d45bf6698c2b438fb1062985f1df936ba3af313caed1") diff --git a/var/spack/repos/builtin/packages/r-proj/package.py b/var/spack/repos/builtin/packages/r-proj/package.py index 78463c53d9..34d502b5e2 100644 --- a/var/spack/repos/builtin/packages/r-proj/package.py +++ b/var/spack/repos/builtin/packages/r-proj/package.py @@ -9,13 +9,29 @@ from spack.package import * class RProj(RPackage): """Generic Coordinate System Transformations Using 'PROJ'. - Currently non-operational, a harmless wrapper to allow package 'reproj' to - install and function while relying on the 'proj4' package.""" + A wrapper around the generic coordinate transformation software 'PROJ' + that transforms coordinates from one coordinate reference system ('CRS') + to another. This includes cartographic projections as well as geodetic + transformations. The intention is for this package to be used by + user-packages such as 'reproj', and that the older 'PROJ.4' and version 5 + pathways be provided by the 'proj4' package.""" cran = "PROJ" + version("0.5.0", sha256="fa6316693289a65d53a764b422f15072c34f440375264b822f2ddd2c6ec88c9b") version("0.4.0", sha256="dde90cfeca83864e61a7422e1573d2d55bb0377c32b9a8f550f47b8631121ce7") version("0.1.0", sha256="5186f221335e8092bbcd4d82bd323ee7e752c7c9cf83d3f94e4567e0b407aa6f") depends_on("r@2.10:", type=("build", "run")) depends_on("r@3.0.2:", type=("build", "run"), when="@0.4.0:") + + depends_on("r-lifecycle", type=("build", "run"), when="@0.5.0:") + depends_on("r-wk", type=("build", "run"), when="@0.5.0:") + + depends_on("proj@6.3.1:", type=("build", "run"), when="@0.4.5:") + # pkgconfig for proj requires libtiff-4 and libcurl + depends_on("libtiff@4", type=("build", "run")) + depends_on("curl", type=("build", "run")) + + def setup_build_environment(self, env): + env.prepend_path("LD_LIBRARY_PATH", self.spec["proj"].prefix.lib) diff --git a/var/spack/repos/builtin/packages/r-proj4/package.py b/var/spack/repos/builtin/packages/r-proj4/package.py index d0d6d02985..db7522b89d 100644 --- a/var/spack/repos/builtin/packages/r-proj4/package.py +++ b/var/spack/repos/builtin/packages/r-proj4/package.py @@ -17,6 +17,7 @@ class RProj4(RPackage): license("GPL-2.0-only") + version("1.0-14", sha256="d3d571da92136666dd3658b6006a7d4d4254cdeada5cda21b05b0c0e692a00b6") version("1.0-12", sha256="4aeb8a54d5b459674093c76068b92dbd3ce99a4e5db8829fbae868c2e43776f8") version("1.0-11", sha256="c5f186530267005d53cc2e86849613b254ca4515a8b10310146f712d45a1d11d") version("1.0-10.1", sha256="66857cbe5cba4930b18621070f9a7263ea0d8ddc3e5a035a051a1496e4e1da19") diff --git a/var/spack/repos/builtin/packages/r-projpred/package.py b/var/spack/repos/builtin/packages/r-projpred/package.py index 35c3befa53..0446671c76 100644 --- a/var/spack/repos/builtin/packages/r-projpred/package.py +++ b/var/spack/repos/builtin/packages/r-projpred/package.py @@ -21,29 +21,33 @@ class RProjpred(RPackage): license("GPL-3.0-only OR custom") + version("2.8.0", sha256="b383ddc5eca275737b96e4e3e14256b4f4abc4b29d292b5cebf3828d0921a1f6") version("2.5.0", sha256="b6ec123f5bf573d14cbd5431e3fbdee3215d71d3e263fcbec72bee5930044e39") version("2.2.1", sha256="6825ace07d1e580d5916bcd6bfd163460ae9008926f464e00deb7f2395cc72ad") version("2.1.2", sha256="a88a651e533c118aad0e8c2c905cfcf688d9c419ed195896036b8f6667b5cfb0") version("2.0.2", sha256="af0a9fb53f706090fe81b6381b27b0b6bd3f7ae1e1e44b0ada6f40972b09a55b") depends_on("r@3.5.0:", type=("build", "run")) - depends_on("r-loo@2.0.0:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@2.7.0:") + depends_on("r-rcpp", type=("build", "run")) + depends_on("r-gtools", type=("build", "run"), when="@2.7.0:") + depends_on("r-ggplot2", type=("build", "run")) + depends_on("r-scales", type=("build", "run"), when="@2.6.0:") depends_on("r-rstantools@2.0.0:", type=("build", "run")) + depends_on("r-loo@2.0.0:", type=("build", "run")) depends_on("r-lme4", type=("build", "run")) depends_on("r-lme4@1.1-28:", type=("build", "run"), when="@2.5.0:") depends_on("r-mvtnorm", type=("build", "run"), when="@2.1.2:") - depends_on("r-ggplot2", type=("build", "run")) - depends_on("r-rcpp", type=("build", "run")) - depends_on("r-abind", type=("build", "run"), when="@2.5.0:") depends_on("r-mgcv", type=("build", "run")) depends_on("r-gamm4", type=("build", "run")) - depends_on("r-mclogit", type=("build", "run"), when="@2.5.0:") - depends_on("r-nnet", type=("build", "run"), when="@2.5.0:") - depends_on("r-ucminf", type=("build", "run"), when="@2.5.0:") - depends_on("r-ordinal", type=("build", "run"), when="@2.5.0:") + depends_on("r-abind", type=("build", "run"), when="@2.5.0:") depends_on("r-mass", type=("build", "run")) + depends_on("r-ordinal", type=("build", "run"), when="@2.5.0:") + depends_on("r-nnet", type=("build", "run"), when="@2.5.0:") + depends_on("r-mclogit", type=("build", "run"), when="@2.5.0:") depends_on("r-rcpparmadillo", type=("build", "run")) + depends_on("r-ucminf", type=("build", "run"), when="@2.5.0") depends_on("r-optimx", type=("build", "run"), when="@:2.0.2") depends_on("r-rngtools@1.2.4:", type=("build", "run"), when="@:2.0.2") depends_on("r-tidyverse", type=("build", "run"), when="@:2.0.2") diff --git a/var/spack/repos/builtin/packages/r-promises/package.py b/var/spack/repos/builtin/packages/r-promises/package.py index 32016c2572..91cf59cbee 100644 --- a/var/spack/repos/builtin/packages/r-promises/package.py +++ b/var/spack/repos/builtin/packages/r-promises/package.py @@ -19,12 +19,15 @@ class RPromises(RPackage): license("MIT") + version("1.3.0", sha256="f8209df3bab33340c1bc8c0d26caee2890fafb93129ff1423302abae5931fad3") version("1.2.0.1", sha256="8d3a8217909e91f4c2a2eebba5ac8fc902a9ac1a9e9d8a30815c9dc0f162c4b7") version("1.1.1", sha256="3718c6eb2c3362cbe89389e613118f783f9977dbf24757f85026e661199c5800") version("1.0.1", sha256="c2dbc7734adf009377a41e570dfe0d82afb91335c9d0ca1ef464b9bdcca65558") depends_on("r-r6", type=("build", "run")) - depends_on("r-rcpp", type=("build", "run")) + depends_on("r-fastmap@1.1.0:", type=("build", "run"), when="@1.2.1:") depends_on("r-later", type=("build", "run")) - depends_on("r-rlang", type=("build", "run")) depends_on("r-magrittr", type=("build", "run")) + depends_on("r-magrittr@1.5:", type=("build", "run"), when="@1.2.1:") + depends_on("r-rcpp", type=("build", "run")) + depends_on("r-rlang", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ps/package.py b/var/spack/repos/builtin/packages/r-ps/package.py index 89612d8233..c78023b660 100644 --- a/var/spack/repos/builtin/packages/r-ps/package.py +++ b/var/spack/repos/builtin/packages/r-ps/package.py @@ -16,6 +16,7 @@ class RPs(RPackage): license("MIT") + version("1.7.7", sha256="46fedcb2b8faa94ea1451e48e6f31a1e4ed3b12f529e645f9efcfca1003d22f2") version("1.7.5", sha256="1abc3ae3c55797b994973f7e43bf5c7bbb4da649a0dcfad36675e196dba4cb4e") version("1.7.2", sha256="9225ebdedb5c1b245bb38b01ce88084c0fc7eafcff6c4fda2e299003ace6b21a") version("1.7.1", sha256="9c458a377d47cc972d3cd0b2a17d0b7ad3cf3b62226410803072089a57a55ef1") diff --git a/var/spack/repos/builtin/packages/r-pscbs/package.py b/var/spack/repos/builtin/packages/r-pscbs/package.py index 1ac75ed63a..89a7f6e1fa 100644 --- a/var/spack/repos/builtin/packages/r-pscbs/package.py +++ b/var/spack/repos/builtin/packages/r-pscbs/package.py @@ -15,23 +15,30 @@ class RPscbs(RPackage): cran = "PSCBS" + version("0.67.0", sha256="2695d18d197a3bd729cca0940248ddc1880e4f54da95b9ecc5eda002a715cdbe") version("0.66.0", sha256="58805636e55e0fd3f57bd4a0e296a8bb3d57a7bdd0fdd5868a73ddc83d173a93") version("0.65.0", sha256="3365065d5375c599eb024bfff12c5f6b10a6b1a4fe4ba6f200f7e83618dd399a") depends_on("r@3.2.0:", type=("build", "run")) depends_on("r-r-methodss3@1.7.1:", type=("build", "run")) depends_on("r-r-methodss3@1.8.1:", type=("build", "run"), when="@0.66.0:") + depends_on("r-r-methodss3@1.8.2:", type=("build", "run"), when="@0.67.0:") depends_on("r-r-oo@1.22.1:", type=("build", "run")) depends_on("r-r-oo@1.24.0:", type=("build", "run"), when="@0.66.0:") + depends_on("r-r-oo@1.25.0:", type=("build", "run"), when="@0.67.0:") depends_on("r-r-utils@2.8.0:", type=("build", "run")) depends_on("r-r-utils@2.11.0:", type=("build", "run"), when="@0.66.0:") + depends_on("r-r-utils@2.12.0:", type=("build", "run"), when="@0.67.0:") depends_on("r-r-cache@0.13.0:", type=("build", "run")) depends_on("r-r-cache@0.15.0:", type=("build", "run"), when="@0.66.0:") + depends_on("r-r-cache@0.16.0:", type=("build", "run"), when="@0.67.0:") depends_on("r-matrixstats@0.54.0:", type=("build", "run")) depends_on("r-matrixstats@0.61.0:", type=("build", "run"), when="@0.66.0:") + depends_on("r-matrixstats@0.62.0:", type=("build", "run"), when="@0.67.0:") depends_on("r-aroma-light@2.4.0:", type=("build", "run")) depends_on("r-dnacopy@1.42.0:", type=("build", "run")) depends_on("r-listenv@0.7.0:", type=("build", "run")) depends_on("r-listenv@0.8.0:", type=("build", "run"), when="@0.66.0:") depends_on("r-future@1.12.0:", type=("build", "run")) depends_on("r-future@1.22.1:", type=("build", "run"), when="@0.66.0:") + depends_on("r-future@1.28.0:", type=("build", "run"), when="@0.67.0:") diff --git a/var/spack/repos/builtin/packages/r-pspline/package.py b/var/spack/repos/builtin/packages/r-pspline/package.py index 03e2140fe4..c77803682c 100644 --- a/var/spack/repos/builtin/packages/r-pspline/package.py +++ b/var/spack/repos/builtin/packages/r-pspline/package.py @@ -15,6 +15,7 @@ class RPspline(RPackage): license("custom") + version("1.0-20", sha256="eaa7cd9b870d5d10cf457c435ebcbe698ba0d463e3a996fbe758a4b57b93eb8a") version("1.0-19", sha256="ba55bf193f1df9785a0e13b7ef727d5fd2415b318cd6a26b48a2db490c4dfe40") version("1.0-18", sha256="f71cf293bd5462e510ac5ad16c4a96eda18891a0bfa6447dd881c65845e19ac7") diff --git a/var/spack/repos/builtin/packages/r-psych/package.py b/var/spack/repos/builtin/packages/r-psych/package.py index c474110e1e..75f9ce050a 100644 --- a/var/spack/repos/builtin/packages/r-psych/package.py +++ b/var/spack/repos/builtin/packages/r-psych/package.py @@ -29,6 +29,7 @@ class RPsych(RPackage): license("GPL-2.0-or-later") + version("2.4.6.26", sha256="2d191a95e0107a7f402a17729916099dff201d20c4435f8bf43e6e8a2fbbd2be") version("2.3.3", sha256="94a9f3c39f8243573752709b89eb8068e11dbe809f86ecf0225fb429556efb6f") version("2.2.9", sha256="4cd518bff387fef95067696b0a0b323310e6f4a063c3d242f2a50bcb17675571") version("2.2.5", sha256="dcc3f9b30ed44dfd1de0366295a308e0b52959eb7ac9cb3bc3f32dc5b15fc321") @@ -38,8 +39,9 @@ class RPsych(RPackage): version("1.8.10", sha256="e8901ddab14729bfccbd82a8824fbb6523c10c2cd8fb7199b1ca56a7ffcb6e58") version("1.7.8", sha256="f328ea602e22b0e7e5f310a8d19f305d8e0a3a86040cdfb64863b68b56d55135") - depends_on("r-mnormt", type=("build", "run")) + depends_on("r-gparotation", type=("build", "run"), when="@2.3.6:") depends_on("r-lattice", type=("build", "run")) + depends_on("r-mnormt", type=("build", "run")) depends_on("r-nlme", type=("build", "run")) depends_on("r-foreign", type=("build", "run"), when="@:1.8.12") diff --git a/var/spack/repos/builtin/packages/r-purrr/package.py b/var/spack/repos/builtin/packages/r-purrr/package.py index b0b1acc709..002bc75ebd 100644 --- a/var/spack/repos/builtin/packages/r-purrr/package.py +++ b/var/spack/repos/builtin/packages/r-purrr/package.py @@ -15,6 +15,7 @@ class RPurrr(RPackage): license("MIT") + version("1.0.2", sha256="2c1bc6bb88433dff0892b41136f2f5c23573b335ff35a4775c72aa57b48bbb63") version("1.0.1", sha256="0a7911be3539355a4c40d136f2602befcaaad5a3f7222078500bfb969a6f2ba2") version("0.3.5", sha256="a2386cd7e78a043cb9c14703023fff15ab1c879bf648816879d2c0c4a554fcef") version("0.3.4", sha256="23ebc93bc9aed9e7575e8eb9683ff4acc0270ef7d6436cc2ef4236a9734840b2") @@ -25,12 +26,16 @@ class RPurrr(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.2:", type=("build", "run"), when="@0.3.3:") depends_on("r@3.4.0:", type=("build", "run"), when="@1.0.1:") + depends_on("r@3.5.0:", type=("build", "run"), when="@1.0.2:") depends_on("r-vctrs@0.5.0:", type=("build", "run"), when="@1.0.1:") + depends_on("r-vctrs@0.6.3:", type=("build", "run"), when="@1.0.2:") depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@1.0.1:") depends_on("r-cli@3.4.0:", type=("build", "run"), when="@1.0.1:") + depends_on("r-cli@3.6.1:", type=("build", "run"), when="@1.0.2:") depends_on("r-magrittr@1.5:", type=("build", "run")) depends_on("r-magrittr@1.5.0:", type=("build", "run"), when="@1.0.1:") depends_on("r-rlang@0.3.1:", type=("build", "run")) depends_on("r-rlang@0.4.10:", type=("build", "run"), when="@1.0.1:") + depends_on("r-rlang@1.1.1:", type=("build", "run"), when="@1.0.2:") depends_on("r-tibble", type=("build", "run"), when="@:0.2.9") diff --git a/var/spack/repos/builtin/packages/r-qs/package.py b/var/spack/repos/builtin/packages/r-qs/package.py index a4c64566a1..fc552f62b0 100644 --- a/var/spack/repos/builtin/packages/r-qs/package.py +++ b/var/spack/repos/builtin/packages/r-qs/package.py @@ -18,6 +18,7 @@ class RQs(RPackage): license("GPL-3.0-only") + version("0.26.3", sha256="8801a41f6e5161a55193dc9a75fcee8da1b0e02eebd7653ec05326d594321ee3") version("0.25.5", sha256="3f87388708a0fdfb0e68caade75ed771fd395cb4f649973459bc97f41d42064c") version("0.25.4", sha256="92c49206a9c1c66dbd95f12efc3a57acb728e1f8387b549c437519fb2b98a533") version("0.25.3", sha256="51adf6a112c19f78ceeefa55acf800c7e6bf2664e7d9cea9d932abb24f22be6b") @@ -26,6 +27,7 @@ class RQs(RPackage): depends_on("r@3.5.0:", type=("build", "run")) depends_on("r@3.0.2:", type=("build", "run"), when="@0.25.2:") + depends_on("r-bh", type=("build", "run"), when="@0.26.0:") depends_on("r-rcpp", type=("build", "run")) depends_on("r-rapiserialize", type=("build", "run")) depends_on("r-rapiserialize@0.1.1:", type=("build", "run"), when="@0.25.4:") diff --git a/var/spack/repos/builtin/packages/r-qtl/package.py b/var/spack/repos/builtin/packages/r-qtl/package.py index 9497f5aa51..ba93459f12 100644 --- a/var/spack/repos/builtin/packages/r-qtl/package.py +++ b/var/spack/repos/builtin/packages/r-qtl/package.py @@ -17,6 +17,7 @@ class RQtl(RPackage): license("GPL-3.0-only") + version("1.66", sha256="d46a7d49f2d0875c0c1cba77c993f995e7cac4db5796dfb1c62d9fa4eb60d681") version("1.60", sha256="8e9e5dfe2c6a76d4f69fb27add93ed0859ed3eaa23347310c2b9e3f07359d8ad") version("1.58", sha256="6eca5ac177ae62304d63c224f161b0f3ac9327ec1a03da5d7df2d5ddf4b09d97") version("1.52", sha256="320ac6172f2911ee772472becd68ff49a357c99fe7454335e4a19090d5788960") diff --git a/var/spack/repos/builtin/packages/r-quantmod/package.py b/var/spack/repos/builtin/packages/r-quantmod/package.py index 2368def60f..1771e645f4 100644 --- a/var/spack/repos/builtin/packages/r-quantmod/package.py +++ b/var/spack/repos/builtin/packages/r-quantmod/package.py @@ -16,6 +16,7 @@ class RQuantmod(RPackage): license("GPL-3.0-only") + version("0.4.26", sha256="396c5d3241f77911d9f7738a60a9d728ed25b3dbce2fd92f5b11f9fcbcb8bb98") version("0.4.22", sha256="f29496f1ca9a9faf91aba70ac50bfe79303197ca8f1e369c96300005b5e6765e") version("0.4.20", sha256="f757df41595d885f7927e18f4835bc233d78d2d3ae48fd11c8874d4338c48e94") version("0.4.18", sha256="aa40448e93a1facf399213ac691784007731e869ad243fe762381ab099cd6c35") diff --git a/var/spack/repos/builtin/packages/r-quantreg/package.py b/var/spack/repos/builtin/packages/r-quantreg/package.py index 9bff357602..939fa66209 100644 --- a/var/spack/repos/builtin/packages/r-quantreg/package.py +++ b/var/spack/repos/builtin/packages/r-quantreg/package.py @@ -21,6 +21,7 @@ class RQuantreg(RPackage): license("GPL-2.0-or-later") + version("5.98", sha256="a98cb259d8cf563f66a25ae8858794e574dd40de6206816ad61b1ffeb9686a61") version("5.95", sha256="4b05a81eceebbd927372cefdc4912dfa70b6dfcd96528489f78e125eb32a96cc") version("5.94", sha256="52d585ccb972ed7726b7d083f5635d3e42915847398e00fd6e0f69a5fe1b17c1") version("5.93", sha256="d4a94984a500bf4c92dec21013441f001a4aa0541c4c651384e257a4b4e9e539") diff --git a/var/spack/repos/builtin/packages/r-quickjsr/package.py b/var/spack/repos/builtin/packages/r-quickjsr/package.py new file mode 100644 index 0000000000..10b191fc67 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-quickjsr/package.py @@ -0,0 +1,19 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RQuickjsr(RPackage): + """An 'R' interface to the 'QuickJS' portable 'JavaScript' engine. + The engine and all 'R' to 'JavaScript' interoperability is bundled + within the package, requiring no dependencies beyond a 'C' compiler.""" + + homepage = "https://bellard.org/quickjs/" + cran = "QuickJSR" + + license("MIT", checked_by="wdconinc") + + version("1.3.1", sha256="10559d6e84a838ec97acdbc6028a59e2121811d4a20e83c95cdb8fb4ce208fd1") diff --git a/var/spack/repos/builtin/packages/r-quickplot/package.py b/var/spack/repos/builtin/packages/r-quickplot/package.py index 7cb0c27469..c47c367c2a 100644 --- a/var/spack/repos/builtin/packages/r-quickplot/package.py +++ b/var/spack/repos/builtin/packages/r-quickplot/package.py @@ -18,19 +18,23 @@ class RQuickplot(RPackage): maintainers("dorton21") + version("1.0.2", sha256="78b19e03f9925ea3a5b47c12fef58a154dc0d3598dbdda3fe4e47c6636ab4808") version("0.1.8", sha256="5927186ebbd86d2282c59dd28c4af6977ae5f9bc5766de8fce34b94bbfe33be7") version("0.1.6", sha256="48690a77ae961ed1032130621ef06b2eaf86ee592bf1057471a8c6d6a98ace55") depends_on("r@3.3.0:", type=("build", "run")) depends_on("r@4.0:", type=("build", "run"), when="@0.1.8:") - depends_on("r-backports", type=("build", "run")) + depends_on("r@4.1:", type=("build", "run"), when="@1.0.1:") depends_on("r-data-table@1.10.4:", type=("build", "run")) depends_on("r-fpcompare", type=("build", "run")) - depends_on("r-ggplot2", type=("build", "run")) - depends_on("r-gridbase", type=("build", "run")) - depends_on("r-igraph", type=("build", "run")) - depends_on("r-raster", type=("build", "run")) - depends_on("r-rcolorbrewer", type=("build", "run")) - depends_on("r-rgdal", type=("build", "run")) - depends_on("r-rgeos", type=("build", "run")) - depends_on("r-sp", type=("build", "run")) + depends_on("r-terra", type=("build", "run"), when="@1.0.1:") + + depends_on("r-backports", type=("build", "run"), when="@:1.0.1") + depends_on("r-ggplot2", type=("build", "run"), when="@:1.0.1") + depends_on("r-gridbase", type=("build", "run"), when="@:1.0.1") + depends_on("r-igraph", type=("build", "run"), when="@:1.0.1") + depends_on("r-raster", type=("build", "run"), when="@:1.0.1") + depends_on("r-rcolorbrewer", type=("build", "run"), when="@:1.0.1") + depends_on("r-rgdal", type=("build", "run"), when="@:1.0.1") + depends_on("r-rgeos", type=("build", "run"), when="@:1.0.1") + depends_on("r-sp", type=("build", "run"), when="@:1.0.1") diff --git a/var/spack/repos/builtin/packages/r-r-oo/package.py b/var/spack/repos/builtin/packages/r-r-oo/package.py index f15782b3bc..28ffc400bf 100644 --- a/var/spack/repos/builtin/packages/r-r-oo/package.py +++ b/var/spack/repos/builtin/packages/r-r-oo/package.py @@ -18,6 +18,7 @@ class RROo(RPackage): cran = "R.oo" + version("1.26.0", sha256="f7602b388c2216fbb4d1a31d4040ed92b40dc83d3e3746db7011637db4d44365") version("1.25.0", sha256="b8b19061774918ee7d9d4330c16c0ea505f7cd02d01343df1e8b2e4fb847beef") version("1.24.0", sha256="37a1dab8dd668ceba69a1ba36c0c60e9809e29b74bd56d1e8ed519e19c8e3bb6") version("1.23.0", sha256="f5124ce3dbb0a62e8ef1bfce2de2d1dc2f776e8c48fd8cac358f7f5feb592ea1") @@ -28,3 +29,4 @@ class RROo(RPackage): depends_on("r-r-methodss3@1.7.1:", type=("build", "run")) depends_on("r-r-methodss3@1.8.0:", type=("build", "run"), when="@1.24.0:") depends_on("r-r-methodss3@1.8.1:", type=("build", "run"), when="@1.25.0:") + depends_on("r-r-methodss3@1.8.2:", type=("build", "run"), when="@1.26.0:") diff --git a/var/spack/repos/builtin/packages/r-r-utils/package.py b/var/spack/repos/builtin/packages/r-r-utils/package.py index e673eb3757..91132f04db 100644 --- a/var/spack/repos/builtin/packages/r-r-utils/package.py +++ b/var/spack/repos/builtin/packages/r-r-utils/package.py @@ -13,6 +13,7 @@ class RRUtils(RPackage): cran = "R.utils" + version("2.12.3", sha256="74d6e77a95a23381a490fea54be01b653d4b938a2dc75e749a694ab48302c40c") version("2.12.2", sha256="fe3cf1aa8641540634e96990294d0202d4d94ec79ce73aaf78e4eda30fcb8836") version("2.12.1", sha256="3eb82903bee99f9684cd9dbd4f92d682fdb82feb7ff32a70aa54550e9e09ad62") version("2.12.0", sha256="74de455220ea1e658ac503f5763a6be687d982eb61187779f4019a16db856503") diff --git a/var/spack/repos/builtin/packages/r-ragg/package.py b/var/spack/repos/builtin/packages/r-ragg/package.py index 399b5209f7..3bff5fdae8 100644 --- a/var/spack/repos/builtin/packages/r-ragg/package.py +++ b/var/spack/repos/builtin/packages/r-ragg/package.py @@ -18,6 +18,7 @@ class RRagg(RPackage): license("MIT") + version("1.3.2", sha256="8037a45209fdd50acf101208af8e832b840a11ad4201cf7fb480de432e6b6931") version("1.2.5", sha256="936f4d75e0e01cdeefb9f57d121cdd7812d0de5a9e1a3a8315f92ce1c84da8f9") version("1.2.4", sha256="c547e5636a2eefaa0021a0d50fad1e813c2ce976ec0c9c3f796d38a110680dcd") version("1.2.3", sha256="976da0007ef0d4dbadda4734727b539671b65c1eff4ff392d734f4e2c846f2b2") diff --git a/var/spack/repos/builtin/packages/r-rainbow/package.py b/var/spack/repos/builtin/packages/r-rainbow/package.py index c5c88b9ca7..9cdd8644d2 100644 --- a/var/spack/repos/builtin/packages/r-rainbow/package.py +++ b/var/spack/repos/builtin/packages/r-rainbow/package.py @@ -16,6 +16,7 @@ class RRainbow(RPackage): license("GPL-3.0-only") + version("3.8", sha256="eca456288b70fe4b6c74a587d8624d3b36d67f8f9ffc13320eefb17a952d823d") version("3.7", sha256="159dd90555eee237397f042d811f773aaee779f5036c4e0669a52c36e28d8db2") version("3.6", sha256="63d1246f88a498f3db0321b46a552163631b288a25b24400935db41326636e87") diff --git a/var/spack/repos/builtin/packages/r-ranger/package.py b/var/spack/repos/builtin/packages/r-ranger/package.py index a952be3532..8672102bbf 100644 --- a/var/spack/repos/builtin/packages/r-ranger/package.py +++ b/var/spack/repos/builtin/packages/r-ranger/package.py @@ -20,6 +20,7 @@ class RRanger(RPackage): license("GPL-3.0-only") + version("0.16.0", sha256="0395f93afdb807a7882c1fa8f183a26a871c5168ea0903566951298ef1138589") version("0.15.1", sha256="4d65d9ee7c5f2704a0e303a27222c02aa53e49f3c28dc0b4451371e37ada2b2e") version("0.14.1", sha256="5d99401d555da1cfb11c70e59d1bb545ce48720073a06a2a32eb396f622dee1b") version("0.13.1", sha256="60934f0accc21edeefddbb4ddebfdd7cd10a3d3e90b31aa2e6e4b7f50d632d0a") diff --git a/var/spack/repos/builtin/packages/r-rapiserialize/package.py b/var/spack/repos/builtin/packages/r-rapiserialize/package.py index 8b4e48ed9b..d25c382dc6 100644 --- a/var/spack/repos/builtin/packages/r-rapiserialize/package.py +++ b/var/spack/repos/builtin/packages/r-rapiserialize/package.py @@ -22,5 +22,6 @@ class RRapiserialize(RPackage): maintainers("dorton21") + version("0.1.3", sha256="9f413759eabb2acce2b9a363687ca365e1bbedaf9851d23a2ec3683a3d46f42b") version("0.1.2", sha256="9cc0bbb918eeadb394339c64b15324e8123fbb0061692f40102b111417a2600a") version("0.1.0", sha256="324d42c655c27b4647d194bfcd7c675da95c67ea3a74ce99853502022792a23e") diff --git a/var/spack/repos/builtin/packages/r-raster/package.py b/var/spack/repos/builtin/packages/r-raster/package.py index 1059e36a53..d57d33f632 100644 --- a/var/spack/repos/builtin/packages/r-raster/package.py +++ b/var/spack/repos/builtin/packages/r-raster/package.py @@ -18,6 +18,7 @@ class RRaster(RPackage): license("GPL-3.0-or-later") + version("3.6-26", sha256="c65777225a46ada699e70098f54c60cf191d15e454fac9440aca439a4dbd5592") version("3.6-20", sha256="7e5be49f4e37a2c14a3b87661b252956643b959146cbdb08e983660c1d59a813") version("3.6-3", sha256="9f06e0f7c36258790a97421b3a26d98c9b6a2cb702f941e58ab0b18f21b0c3c6") version("3.5-15", sha256="29c7d3c5d34284f8b5a2ddc9989fbcf092ce209d5eb5310ebc772b5ebdfdd685") @@ -37,3 +38,4 @@ class RRaster(RPackage): depends_on("r-terra@1.5-12:", type=("build", "run"), when="@3.5-15:") depends_on("r-terra@1.6-16:", type=("build", "run"), when="@3.6-3:") depends_on("r-terra@1.6-41:", type=("build", "run"), when="@3.6-20:") + depends_on("r-terra@1.7-29:", type=("build", "run"), when="@3.6-23:") diff --git a/var/spack/repos/builtin/packages/r-rbibutils/package.py b/var/spack/repos/builtin/packages/r-rbibutils/package.py index f4c84e16dd..382b8aced4 100644 --- a/var/spack/repos/builtin/packages/r-rbibutils/package.py +++ b/var/spack/repos/builtin/packages/r-rbibutils/package.py @@ -18,6 +18,7 @@ class RRbibutils(RPackage): license("GPL-2.0-only") + version("2.2.16", sha256="9c7c0fba47f63b1749005311c7174b40e72d95c863a67b736a84b8ff375a2aaf") version("2.2.13", sha256="ac235c60bf191ad1830b93045af1b2fe50a6978f6f63cecc4c514a8ba339efc2") version("2.2.9", sha256="b22c07ff916ec338e5a8c6e7e4302f06c9b88d64ee6a59ee4bf5d83a3d5eff86") version("2.2.8", sha256="f1aecdeeba99042d34de19234238c5bbdc18a26f271f6adf9c9b7e349d50d152") diff --git a/var/spack/repos/builtin/packages/r-rcpp/package.py b/var/spack/repos/builtin/packages/r-rcpp/package.py index f6e52df3a1..7f45548130 100644 --- a/var/spack/repos/builtin/packages/r-rcpp/package.py +++ b/var/spack/repos/builtin/packages/r-rcpp/package.py @@ -23,6 +23,7 @@ class RRcpp(RPackage): cran = "Rcpp" + version("1.0.13", sha256="21fec650c113e57935fd86c7d1be190811f1ae036c1ee203bfbbf3ad5cdb22ce") version("1.0.12", sha256="0c7359cc43beee02761aa3df2baccede1182d29d28c9cd49964b609305062bd0") version("1.0.11", sha256="df757c3068599c6c05367900bcad93547ba3422d59802dbaca20fd74d4d2fa5f") version("1.0.10", sha256="1e65e24a9981251ab5fc4f9fd65fe4eab4ba0255be3400a8c5abe20b62b5d546") diff --git a/var/spack/repos/builtin/packages/r-rcppannoy/package.py b/var/spack/repos/builtin/packages/r-rcppannoy/package.py index 3277a206c0..efe0cbb978 100644 --- a/var/spack/repos/builtin/packages/r-rcppannoy/package.py +++ b/var/spack/repos/builtin/packages/r-rcppannoy/package.py @@ -20,6 +20,7 @@ class RRcppannoy(RPackage): cran = "RcppAnnoy" + version("0.0.22", sha256="9f2121d787c4d3e7beccdd65f5d1de81f31c99d57d5d61ca3cc5af7169dd8f65") version("0.0.20", sha256="dcc6c7e091154d0a5698472e0fc7ed77976941c7376d21e019c90c3efaeacf85") version("0.0.19", sha256="89b209900516f3096b53c90937081fb8965c605c867aa465f1b3b68092b7688a") version("0.0.18", sha256="e4e7ddf071109b47b4fdf285db6d2155618ed73da829c30d8e64fc778e63c858") diff --git a/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py b/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py index fd7f543b70..16bd7ee5a9 100644 --- a/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py +++ b/var/spack/repos/builtin/packages/r-rcpparmadillo/package.py @@ -23,6 +23,7 @@ class RRcpparmadillo(RPackage): cran = "RcppArmadillo" + version("14.0.0-1", sha256="80c4d4fadc3ed92712affc50279de4c5f2e1f7ee777ad1f1b3f9f3e94a64ba90") version( "0.12.4.0.0", sha256="f6db54c465abc0a570a0da6f737d9fdf2187287fb235ce487b1903b5177482cb" ) @@ -59,3 +60,4 @@ class RRcpparmadillo(RPackage): depends_on("r@3.3.0:", type=("build", "run"), when="@0.8.500.0:") depends_on("r-rcpp@0.11.0:", type=("build", "run")) + depends_on("r-rcpp@1.0.8:", type=("build", "run"), when="@0.12.8.4.0:") diff --git a/var/spack/repos/builtin/packages/r-rcppblaze/package.py b/var/spack/repos/builtin/packages/r-rcppblaze/package.py index 817b604c3a..274f2fe7dc 100644 --- a/var/spack/repos/builtin/packages/r-rcppblaze/package.py +++ b/var/spack/repos/builtin/packages/r-rcppblaze/package.py @@ -37,9 +37,14 @@ class RRcppblaze(RPackage): license("BSD-3-Clause") + version("1.0.1", sha256="2d152294dc231e4ab097a377ddeda6f2bbb608970c82563a893c77de08916227") version("0.2.2", sha256="67550ed8aea12a219047af61b41e5b9f991608a21ce9a8fbf7ac55da0f7c2742") depends_on("r@3.0.2:", type=("build", "run")) + depends_on("r@4.2.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-rcpp@0.11.0:", type=("build", "run")) + depends_on("r-rcpp@1.0.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-matrix@1.1-0:", type=("build", "run")) - depends_on("r-bh@1.54.0-2:", type=("build", "run")) + depends_on("r-matrix@1.5-0:", type=("build", "run"), when="@1.0.0:") + + depends_on("r-bh@1.54.0-2:", type=("build", "run"), when="@:0.2.2") diff --git a/var/spack/repos/builtin/packages/r-rcppcnpy/package.py b/var/spack/repos/builtin/packages/r-rcppcnpy/package.py index 550a3ba3c2..475e7862c3 100644 --- a/var/spack/repos/builtin/packages/r-rcppcnpy/package.py +++ b/var/spack/repos/builtin/packages/r-rcppcnpy/package.py @@ -20,6 +20,7 @@ class RRcppcnpy(RPackage): license("BitTorrent-1.0") + version("0.2.12", sha256="856dbc857b2d425c80d9a1628e45743234fee2e68575aa9e2d29a6efae60c39a") version("0.2.11", sha256="5dbb36f2526c276fd79b8e08a30503dc401cdf54d8c40f61af758c9ee1192f55") version("0.2.10", sha256="77d6fbc86520a08da40d44c0b82767099f8f719ca95870d91efff1a9cab1ab9c") version("0.2.9", sha256="733f004ad1a8b0e5aafbf547c4349d2df3118afd57f1ff99f20e39135c6edb30") diff --git a/var/spack/repos/builtin/packages/r-rcppeigen/package.py b/var/spack/repos/builtin/packages/r-rcppeigen/package.py index 2b0899a537..c58708e5b4 100644 --- a/var/spack/repos/builtin/packages/r-rcppeigen/package.py +++ b/var/spack/repos/builtin/packages/r-rcppeigen/package.py @@ -27,6 +27,7 @@ class RRcppeigen(RPackage): license("MPL-2.0") + version("0.3.4.0.1", sha256="25ed48f148b50aaadd92752d73e3eefe00ab4ecd4ae5662ae91a9ff3f72a4e26") version("0.3.3.9.3", sha256="5873a47fd6587d916f86119ab140c6736abf80ac45d06ff1c9d198708e7d1c76") version("0.3.3.9.2", sha256="2547e794d5a6fb8d9fbadf19e64afa0bcf413cc69ecf3f428995fa5a0fced493") version("0.3.3.9.1", sha256="8a0486249b778a4275a1168fc89fc7fc49c2bb031cb14b50a50089acae7fe962") @@ -36,6 +37,7 @@ class RRcppeigen(RPackage): version("0.3.2.9.0", sha256="25affba9065e3c12d67b1934d1ce97a928a4011a7738f7b90f0e9830409ec93b") version("0.3.2.8.1", sha256="ceccb8785531c5c23f9232b594e5372c214a114a08ec759115e946badd08d681") - depends_on("r-matrix@1.1-0:", type=("build", "run")) depends_on("r-rcpp@0.11.0:", type=("build", "run")) depends_on("r@3.6.0:", type=("build", "run"), when="@0.3.3.9.3:") + + depends_on("r-matrix@1.1-0:", type=("build", "run"), when="@:0.3.3.9.3") diff --git a/var/spack/repos/builtin/packages/r-rcppensmallen/package.py b/var/spack/repos/builtin/packages/r-rcppensmallen/package.py index a835b67d9a..32837f6bef 100644 --- a/var/spack/repos/builtin/packages/r-rcppensmallen/package.py +++ b/var/spack/repos/builtin/packages/r-rcppensmallen/package.py @@ -12,9 +12,13 @@ class RRcppensmallen(RPackage): cran = "RcppEnsmallen" version( + "0.2.21.1.1", sha256="87396e259666c8797a00c4255d912da58c7880313a8c4e7d48c6384eb6161956" + ) + version( "0.2.19.0.1", sha256="b4a9bde4dde309a52a47b56790389ecab14fe64066098d2a38b1b588ba3d8631" ) depends_on("r@3.3.0:", type=("build", "run")) + depends_on("r@4.0.0:", type=("build", "run"), when="@0.2.20.0.1:") depends_on("r-rcpp", type=("build", "run")) depends_on("r-rcpparmadillo@0.9.800.0.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rcpphnsw/package.py b/var/spack/repos/builtin/packages/r-rcpphnsw/package.py index 0400df4dc1..15af171e21 100644 --- a/var/spack/repos/builtin/packages/r-rcpphnsw/package.py +++ b/var/spack/repos/builtin/packages/r-rcpphnsw/package.py @@ -17,6 +17,7 @@ class RRcpphnsw(RPackage): cran = "RcppHNSW" + version("0.6.0", sha256="a5a6ed00a84143aa62aa67df66fcccae657d5db0a1f9bb4b955a8e94c2ff580f") version("0.4.1", sha256="4f0082154f77dcb7756d41cdbfe0f58316431b9027081321a27942f319097c74") version("0.3.0", sha256="a0eb4eea65e28ba31e8306a1856f7e617a192bd448b148f88abe99181cbde007") version("0.1.0", sha256="75a54c30953845dec685764c7b3b4cd7315197c91aef4ab3b4eb0a6293010a95") diff --git a/var/spack/repos/builtin/packages/r-rcppparallel/package.py b/var/spack/repos/builtin/packages/r-rcppparallel/package.py index c127625cc3..86f026cdaf 100644 --- a/var/spack/repos/builtin/packages/r-rcppparallel/package.py +++ b/var/spack/repos/builtin/packages/r-rcppparallel/package.py @@ -16,6 +16,7 @@ class RRcppparallel(RPackage): cran = "RcppParallel" + version("5.1.9", sha256="fd0861f3f0f7be4e0ef29c021e75beb351ae2eb18ce5d79e21f2725da4da114f") version("5.1.7", sha256="f9c30eb9ce1abffc590825d513d6d28dcbe970e36032dd7521febf04e905b29c") version("5.1.5", sha256="6396322b3b6d6f7019aac808ceb74707bc5c4ed01677fab408372c2a5508c2ea") version("5.0.2", sha256="8ca200908c6365aafb2063be1789f0894969adc03c0f523c6cc45434b8236f81") diff --git a/var/spack/repos/builtin/packages/r-rcppprogress/package.py b/var/spack/repos/builtin/packages/r-rcppprogress/package.py index 9693b278bc..2c177e8a68 100644 --- a/var/spack/repos/builtin/packages/r-rcppprogress/package.py +++ b/var/spack/repos/builtin/packages/r-rcppprogress/package.py @@ -25,4 +25,4 @@ class RRcppprogress(RPackage): depends_on("cxx", type="build") # generated - depends_on("r-rcpp@0.9.4:", type=("build", "run"), when="@:0.4") + depends_on("r-rcpp@0.9.4:", type=("build", "run"), when="@:0.4.0") diff --git a/var/spack/repos/builtin/packages/r-rcpproll/package.py b/var/spack/repos/builtin/packages/r-rcpproll/package.py index a963f61290..d9fa889e2e 100644 --- a/var/spack/repos/builtin/packages/r-rcpproll/package.py +++ b/var/spack/repos/builtin/packages/r-rcpproll/package.py @@ -16,6 +16,7 @@ class RRcpproll(RPackage): cran = "RcppRoll" + version("0.3.1", sha256="d2f5d978b6feb8510ec1a1a50ba0e8bf9002bb77bfad7d120f5b30b8f56036df") version("0.3.0", sha256="cbff2096443a8a38a6f1dabf8c90b9e14a43d2196b412b5bfe5390393f743f6b") depends_on("r@2.15.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rcppziggurat/package.py b/var/spack/repos/builtin/packages/r-rcppziggurat/package.py index e261a2745c..9b1f89a11d 100644 --- a/var/spack/repos/builtin/packages/r-rcppziggurat/package.py +++ b/var/spack/repos/builtin/packages/r-rcppziggurat/package.py @@ -23,6 +23,7 @@ class RRcppziggurat(RPackage): depends_on("c", type="build") # generated depends_on("cxx", type="build") # generated + depends_on("r@3.0.0:", type=("build", "run"), when="@0.1.6:") depends_on("r-rcpp", type=("build", "run")) depends_on("r-rcppgsl", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rcurl/package.py b/var/spack/repos/builtin/packages/r-rcurl/package.py index 187bc38098..c96541652a 100644 --- a/var/spack/repos/builtin/packages/r-rcurl/package.py +++ b/var/spack/repos/builtin/packages/r-rcurl/package.py @@ -21,6 +21,7 @@ class RRcurl(RPackage): cran = "RCurl" + version("1.98-1.16", sha256="1a8dc40e10593617348071c6265cc7fac22e26271564206b308a3badfc6c0da7") version("1.98-1.12", sha256="1a83fef04e9573b402171a6e4a4b27857a3d045eec8970f8f7233850bba626b2") version("1.98-1.9", sha256="f28d4871675ec3d2b45fb5d36f7647f546f81121510954c3ad24fdec1643cec5") version("1.98-1.6", sha256="6cb56864ac043195b658bbdb345518d561507d84ccd60362866e970c2f71d1a2") diff --git a/var/spack/repos/builtin/packages/r-rdpack/package.py b/var/spack/repos/builtin/packages/r-rdpack/package.py index cb3ecb5a5f..18d017edcd 100644 --- a/var/spack/repos/builtin/packages/r-rdpack/package.py +++ b/var/spack/repos/builtin/packages/r-rdpack/package.py @@ -19,6 +19,7 @@ class RRdpack(RPackage): cran = "Rdpack" + version("2.6.1", sha256="39626397c4ab1706bfdc53433dbaa0a6cb691dcba68173945b5a9eb041acf945") version("2.4", sha256="7652add12b30fcba1f3a12493a089a4166079e78c47b95802a98595a3ff53581") version("2.3", sha256="c45e1ab8352b92ce03f26ece1f4db3716959fca2af9e826d5bd3c76b2151f7c5") version("2.1.3", sha256="8381a8866b9acf5acb2c80069684339c3921f1b45fa202719e8f6852fb4d55b8") diff --git a/var/spack/repos/builtin/packages/r-readr/package.py b/var/spack/repos/builtin/packages/r-readr/package.py index 2621ce060f..c85022427a 100644 --- a/var/spack/repos/builtin/packages/r-readr/package.py +++ b/var/spack/repos/builtin/packages/r-readr/package.py @@ -18,6 +18,7 @@ class RReadr(RPackage): license("MIT") + version("2.1.5", sha256="0fa65a5fe0a46cffe221b7696b52adb82dd4d7a692a895484e438e439594e10a") version("2.1.4", sha256="98144fa48c4fa61ef8c73ede8f87a2d2c5c44e9502b7875b266eb79984fbeb0d") version("2.1.3", sha256="d70dd55e80e87cf1387811fcdc3da92987a892ee75dae02f77ff074142618263") version("2.1.2", sha256="94afd03a1fa4abcf2985ec903bbf5995d7c590e1a50512ed80d081ef4fe10c1b") @@ -31,6 +32,7 @@ class RReadr(RPackage): depends_on("r@3.1:", type=("build", "run"), when="@1.3.0:") depends_on("r@3.4:", type=("build", "run"), when="@2.1.3:") depends_on("r@3.5:", type=("build", "run"), when="@2.1.4:") + depends_on("r@3.6:", type=("build", "run"), when="@2.1.5:") depends_on("r-cli", type=("build", "run"), when="@1.4.0:") depends_on("r-cli@3.0.0:", type=("build", "run"), when="@2.1.2:") depends_on("r-cli@3.2.0:", type=("build", "run"), when="@2.1.3:") diff --git a/var/spack/repos/builtin/packages/r-readxl/package.py b/var/spack/repos/builtin/packages/r-readxl/package.py index 8867658ab7..5060121560 100644 --- a/var/spack/repos/builtin/packages/r-readxl/package.py +++ b/var/spack/repos/builtin/packages/r-readxl/package.py @@ -18,6 +18,7 @@ class RReadxl(RPackage): license("MIT") + version("1.4.3", sha256="7efebbcdefeb8523633db62b3eeb6ea2e4e81e3d010d8b2adb134011c09a5948") version("1.4.2", sha256="387304e2c5be0dca4861ec0232f0d92cc1882b660ca917f8f2a8a4ae858aba11") version("1.4.1", sha256="f6bebb7f940fb21baacd60345b7075c77eb1d026466c55e6a36148de680da1fa") version("1.4.0", sha256="ab9239c249f79b649f7665a612b3dbf4b774ab633115e6dee41091a8cb2491f7") @@ -28,6 +29,7 @@ class RReadxl(RPackage): depends_on("r@3.4:", type=("build", "run"), when="@1.4.0:") depends_on("r@3.5:", type=("build", "run"), when="@1.4.2:") + depends_on("r@3.6:", type=("build", "run"), when="@1.4.3:") depends_on("r-cellranger", type=("build", "run")) depends_on("r-tibble@1.3.1:", type=("build", "run")) depends_on("r-tibble@2.0.1:", type=("build", "run"), when="@1.4.0:") diff --git a/var/spack/repos/builtin/packages/r-recipes/package.py b/var/spack/repos/builtin/packages/r-recipes/package.py index 499c560a27..b80809a2f5 100644 --- a/var/spack/repos/builtin/packages/r-recipes/package.py +++ b/var/spack/repos/builtin/packages/r-recipes/package.py @@ -19,6 +19,7 @@ class RRecipes(RPackage): license("MIT") + version("1.1.0", sha256="c5dc8876bc680272812bbb4be39a29464c42a7b773f8cc6d07ac4145f830206d") version("1.0.6", sha256="105e97127cdd6aaeb9fb3348e51a9c46e21fb8bcb734cb3bbd6dbdf2b6b2fc8f") version("1.0.2", sha256="1a7b5a9a2946fa34599935b6d93101ec559d8a901d49cc691972c75df8d5670e") version("1.0.1", sha256="9e3ae212413409bf41ec7d1a311586e12c0ca79943cef436707d041c57125bc9") @@ -29,11 +30,11 @@ class RRecipes(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@1.0.1:") + depends_on("r@3.6:", type=("build", "run"), when="@1.1.0:") depends_on("r-dplyr", type=("build", "run")) depends_on("r-dplyr@1.1.0:", type=("build", "run"), when="@1.0.6:") depends_on("r-cli", type=("build", "run"), when="@1.0.1:") depends_on("r-clock@0.6.1:", type=("build", "run"), when="@1.0.6:") - depends_on("r-ellipsis", type=("build", "run"), when="@0.1.17:") depends_on("r-generics", type=("build", "run")) depends_on("r-generics@0.1.0:", type=("build", "run"), when="@0.1.15:") depends_on("r-generics@0.1.0.9000:", type=("build", "run"), when="@0.2.0:") @@ -43,6 +44,7 @@ class RRecipes(RPackage): depends_on("r-hardhat@0.1.6.9001:", type=("build", "run"), when="@0.2.0:") depends_on("r-hardhat@1.2.0:", type=("build", "run"), when="@1.0.1:") depends_on("r-hardhat@1.3.0:", type=("build", "run"), when="@1.0.6:") + depends_on("r-hardhat@1.4.0:", type=("build", "run"), when="@1.1.0:") depends_on("r-ipred", type=("build", "run")) depends_on("r-ipred@0.9-12:", type=("build", "run"), when="@0.1.17:") depends_on("r-lifecycle", type=("build", "run"), when="@0.1.15:") @@ -55,6 +57,7 @@ class RRecipes(RPackage): depends_on("r-purrr@1.0.0:", type=("build", "run"), when="@1.0.6:") depends_on("r-rlang@0.4.0:", type=("build", "run")) depends_on("r-rlang@1.0.3:", type=("build", "run"), when="@1.0.1:") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.0.9:") depends_on("r-tibble", type=("build", "run")) depends_on("r-tidyr", type=("build", "run")) depends_on("r-tidyr@1.0.0:", type=("build", "run"), when="@0.1.15:") @@ -66,3 +69,5 @@ class RRecipes(RPackage): depends_on("r-vctrs", type=("build", "run"), when="@0.1.17:") depends_on("r-vctrs@0.5.0:", type=("build", "run"), when="@1.0.6:") depends_on("r-withr", type=("build", "run")) + + depends_on("r-ellipsis", type=("build", "run"), when="@0.1.17:1.0.10") diff --git a/var/spack/repos/builtin/packages/r-rematch/package.py b/var/spack/repos/builtin/packages/r-rematch/package.py index 54933633fc..1a188bd426 100644 --- a/var/spack/repos/builtin/packages/r-rematch/package.py +++ b/var/spack/repos/builtin/packages/r-rematch/package.py @@ -16,4 +16,5 @@ class RRematch(RPackage): license("MIT") + version("2.0.0", sha256="15daf7bf2907aef8503635bc8631fce9fd75248a1fc2496825588c4bdf785c26") version("1.0.1", sha256="a409dec978cd02914cdddfedc974d9b45bd2975a124d8870d52cfd7d37d47578") diff --git a/var/spack/repos/builtin/packages/r-remotes/package.py b/var/spack/repos/builtin/packages/r-remotes/package.py index 6db1982ab0..4b9b40c792 100644 --- a/var/spack/repos/builtin/packages/r-remotes/package.py +++ b/var/spack/repos/builtin/packages/r-remotes/package.py @@ -18,6 +18,7 @@ class RRemotes(RPackage): license("MIT") + version("2.5.0", sha256="4d663f1426cd88d42f4070f23d969305c575e0499ed1397be6607b0770d2850c") version("2.4.2", sha256="f2ef875f24a485bf4f55a8c830f87cdd5db868f9a8cdb624dc452d0bf66ba516") version("2.2.0", sha256="12f234fd8c46f4ac54e06a3c60e4015ed2193a32762ca4dd6854f120136f33b8") version("2.1.1", sha256="4e590746fce618094089372b185e1ea234b3337b23c44c44118e942d0fb5118b") diff --git a/var/spack/repos/builtin/packages/r-renv/package.py b/var/spack/repos/builtin/packages/r-renv/package.py index 2f60c02864..fe9e81566a 100644 --- a/var/spack/repos/builtin/packages/r-renv/package.py +++ b/var/spack/repos/builtin/packages/r-renv/package.py @@ -19,6 +19,7 @@ class RRenv(RPackage): license("MIT") + version("1.0.7", sha256="7b60b58a23743803ab167f82f78663e86f778947b2bda07afa12689338794507") version("0.17.3", sha256="1c4f28cd233e1f539a2a091f1d118de83eb8aea5d5780dbdfb6bb8dcc6e4f5f0") version("0.16.0", sha256="f3a13e6b71e9be460db73bd9e11a3cb8a1d9bc05c6b77423957cbc2a7f8ba016") version("0.15.5", sha256="b4f1a9a7daa82f0c3123ebd4eeba06e98d5485215518e5292b25bc56741d582e") diff --git a/var/spack/repos/builtin/packages/r-repr/package.py b/var/spack/repos/builtin/packages/r-repr/package.py index 7146c4da14..a7ad7aaf29 100644 --- a/var/spack/repos/builtin/packages/r-repr/package.py +++ b/var/spack/repos/builtin/packages/r-repr/package.py @@ -17,6 +17,7 @@ class RRepr(RPackage): license("GPL-3.0-or-later") + version("1.1.7", sha256="73bd696b4d4211096e0d1e382d5ce6591527d2ff400cc7ae8230f0235eed021b") version("1.1.6", sha256="3d2e6c9b363c1ec4811688deff7fb22093cadc9e0a333930382093d93c16673f") version("1.1.4", sha256="6f799ca83e0940618dd8c22e62ffdce5ec11ba3366c5306ae58b55b53c097040") version("1.1.0", sha256="743fe018f9e3e54067a970bc38b6b8c0c0498b43f88d179ac4a959c2013a5f96") diff --git a/var/spack/repos/builtin/packages/r-reprex/package.py b/var/spack/repos/builtin/packages/r-reprex/package.py index 3043c5e95a..5b983f8b34 100644 --- a/var/spack/repos/builtin/packages/r-reprex/package.py +++ b/var/spack/repos/builtin/packages/r-reprex/package.py @@ -21,6 +21,7 @@ class RReprex(RPackage): license("MIT") + version("2.1.1", sha256="c860368cbc7ef90ea786fb61ab6fa42cd89b5258be48652abc20ad414001879c") version("2.0.2", sha256="a85b16e26112364a65c886efea050df08c17aadf1411fd14ec27d9ef13e87092") version("2.0.1", sha256="0e6d8667cacb63135476a766fba3a4f91e5ad86274ea66d2b1e6d773b5ca6426") version("0.3.0", sha256="203c2ae6343f6ff887e7a5a3f5d20bae465f6e8d9745c982479f5385f4effb6c") @@ -32,6 +33,7 @@ class RReprex(RPackage): depends_on("r@3.1:", type=("build", "run"), when="@0.2.0:") depends_on("r@3.3:", type=("build", "run"), when="@1:") depends_on("r@3.4:", type=("build", "run"), when="@2.0.2:") + depends_on("r@3.6:", type=("build", "run"), when="@2.1.0:") depends_on("r-callr@2.0.0:", type=("build", "run")) depends_on("r-callr@3.3.1:", type=("build", "run"), when="@1:") depends_on("r-callr@3.6.0:", type=("build", "run"), when="@2:") diff --git a/var/spack/repos/builtin/packages/r-reproducible/package.py b/var/spack/repos/builtin/packages/r-reproducible/package.py index 94b3089e4b..42c219d409 100644 --- a/var/spack/repos/builtin/packages/r-reproducible/package.py +++ b/var/spack/repos/builtin/packages/r-reproducible/package.py @@ -26,6 +26,7 @@ class RReproducible(RPackage): license("GPL-3.0-only") + version("2.1.0", sha256="9bdc44339e5e82a0082492cb63846699c7491c7ade74d9843b6173d4be84b92b") version("1.2.16", sha256="ec504cdc1adf305cd008ce65eff226e3cb60b7a454b2c8b98a871c84458546ae") version("1.2.10", sha256="fcee3aeb9d38c561c95df8663614ff0ed91a871719730766171b4ed19c82f729") version("1.2.8", sha256="6f453016404f6a2a235cb4d951a29aa7394dc3bd0b9cfc338dc85fb3d5045dd5") @@ -34,19 +35,22 @@ class RReproducible(RPackage): depends_on("r@3.5:", type=("build", "run")) depends_on("r@3.6:", type=("build", "run"), when="@1.2.8:") depends_on("r@4.0:", type=("build", "run"), when="@1.2.10:") + depends_on("r@4.1:", type=("build", "run"), when="@2.0.2:") depends_on("r-data-table@1.10.4:", type=("build", "run")) - depends_on("r-dbi", type=("build", "run")) depends_on("r-digest", type=("build", "run")) + depends_on("r-filelock", type=("build", "run"), when="@2.0.2:") depends_on("r-fpcompare", type=("build", "run")) - depends_on("r-glue", type=("build", "run")) + depends_on("r-fs", type=("build", "run"), when="@2.0.9:") depends_on("r-lobstr", type=("build", "run"), when="@1.2.10:") - depends_on("r-magrittr", type=("build", "run")) - depends_on("r-raster", type=("build", "run")) - depends_on("r-raster@3.5-15:", type=("build", "run"), when="@1.2.10:") - depends_on("r-rsqlite", type=("build", "run")) - depends_on("r-rlang", type=("build", "run")) - depends_on("r-sp@1.4-2:", type=("build", "run")) depends_on("unrar", type=("build", "run")) + depends_on("r-dbi", type=("build", "run"), when="@:2.0.1") depends_on("r-gdalutilities", type=("build", "run"), when="@1.2.8") + depends_on("r-glue", type=("build", "run"), when="@:2.0.1") + depends_on("r-lobstr", type=("build", "run"), when="@1.2.10:2.0.1") + depends_on("r-magrittr", type=("build", "run"), when="@:2.0.1") + depends_on("r-raster@3.5-15:", type=("build", "run"), when="@1.2.10:2.0.1") depends_on("r-require", type=("build", "run"), when="@:1.2.10") + depends_on("r-rlang", type=("build", "run"), when="@:2.0.1") + depends_on("r-rsqlite", type=("build", "run"), when="@:2.0.1") + depends_on("r-sp@1.4-2:", type=("build", "run"), when="@:2.0.1") diff --git a/var/spack/repos/builtin/packages/r-require/package.py b/var/spack/repos/builtin/packages/r-require/package.py index 867c841784..edd15c5a6f 100644 --- a/var/spack/repos/builtin/packages/r-require/package.py +++ b/var/spack/repos/builtin/packages/r-require/package.py @@ -20,6 +20,7 @@ class RRequire(RPackage): maintainers("dorton21") + version("1.0.1", sha256="52256624b86178ec5efb86b992bbe5a24f2fa53687cec532c0a73b1852ce6800") version("0.3.0", sha256="de879999f71bd3009b58676673f26774119fa84d3d7fcc28d0b02f07d5c63968") version("0.1.4", sha256="1657dacff807ec8865892fce4d55cec9e31affafd90cb44ab59b704d29575a8c") version("0.1.2", sha256="c045c1cc69f6d6248306d88f6399699b9f86134a71b631e35b9101901593af1b") @@ -31,3 +32,4 @@ class RRequire(RPackage): depends_on("r@4.0:", type=("build", "run"), when="@0.1.2:") depends_on("r-data-table@1.10.4:", type=("build", "run")) depends_on("r-remotes", type=("build", "run"), when="@:0.0.13") + depends_on("r-sys", type=("build", "run"), when="@0.3.1.9074:") diff --git a/var/spack/repos/builtin/packages/r-reticulate/package.py b/var/spack/repos/builtin/packages/r-reticulate/package.py index 120cce8a6e..9d6f53afff 100644 --- a/var/spack/repos/builtin/packages/r-reticulate/package.py +++ b/var/spack/repos/builtin/packages/r-reticulate/package.py @@ -19,6 +19,7 @@ class RReticulate(RPackage): license("Apache-2.0") + version("1.38.0", sha256="cb2f313e2351a3cde03be55561b592318ec5376fba3b10e371eeff1986deca8d") version("1.28", sha256="58a299ed18faaa3ff14936752fcc2b86e64ae18fc9f36befdfd492ccb251516f") version("1.26", sha256="3fd74823bde1b0e094db7c2bf6b40ee2501f8d724b4c35b53da95c3c588c74c5") version("1.25", sha256="2125af9e75939c3b7c0dc74f28f42606e816d63aa1143baf631c318ff5ff3a2c") @@ -29,9 +30,12 @@ class RReticulate(RPackage): version("1.13", sha256="adbe41d556b667c4419d563680f8608a56b0f792b8bc427b3bf4c584ff819de3") depends_on("r@3.0:", type=("build", "run")) + depends_on("r@3.5:", type=("build", "run"), when="@1.30.0:") depends_on("r-matrix", type=("build", "run")) depends_on("r-rcpp@0.12.7:", type=("build", "run", "link")) + depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@1.29.0:") depends_on("r-rcpptoml", type=("build", "run", "link"), when="@1.23:") + depends_on("r-rlang", type=("build", "run"), when="@1.29.0:") depends_on("r-here", type=("build", "run", "link"), when="@1.23:") depends_on("r-jsonlite", type=("build", "run")) depends_on("r-png", type=("build", "run", "link"), when="@1.23:") diff --git a/var/spack/repos/builtin/packages/r-rfast/package.py b/var/spack/repos/builtin/packages/r-rfast/package.py index d6ddfe5967..63d534f379 100644 --- a/var/spack/repos/builtin/packages/r-rfast/package.py +++ b/var/spack/repos/builtin/packages/r-rfast/package.py @@ -21,11 +21,13 @@ class RRfast(RPackage): cran = "Rfast" + version("2.1.0", sha256="f9e46cac99db756cd49c9cd83be8adc0d381e6c03102389bfdcb8258d02418ff") version("2.0.7", sha256="8f86159a4760a7124e1c91ae0b022c7e496f81590ea4e4af702bea44e8dedf8f") version("2.0.6", sha256="34694b5c67ce8fcbdc90aac2ac80a74d4b66515f383e6301aea7c020009ebe7f") version("2.0.4", sha256="959907e36e24620c07ec282b203b40214f4914f4928c07ee6491043c27af31d9") depends_on("r@3.5.0:", type=("build", "run")) depends_on("r-rcpp@0.12.3:", type=("build", "run")) + depends_on("r-rcppparallel", type=("build", "run"), when="@2.1.0:") depends_on("r-rcppziggurat", type=("build", "run")) depends_on("r-rcpparmadillo", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rgdal/package.py b/var/spack/repos/builtin/packages/r-rgdal/package.py index 4194c69d7f..a472fbd9ea 100644 --- a/var/spack/repos/builtin/packages/r-rgdal/package.py +++ b/var/spack/repos/builtin/packages/r-rgdal/package.py @@ -23,6 +23,7 @@ class RRgdal(RPackage): cran = "rgdal" + version("1.6-7", sha256="555cedfdadb05db90b061d4b056f96d8b7010c00ea54bc6c1bbcc7684fadae33") version( "1.6-6", sha256="d742d7aadfc004771e61cac28a1faffeb4dbda981dea19115be11c541087399a", diff --git a/var/spack/repos/builtin/packages/r-rgenoud/package.py b/var/spack/repos/builtin/packages/r-rgenoud/package.py index 172196c919..dc489925fe 100644 --- a/var/spack/repos/builtin/packages/r-rgenoud/package.py +++ b/var/spack/repos/builtin/packages/r-rgenoud/package.py @@ -15,6 +15,7 @@ class RRgenoud(RPackage): license("GPL-3.0-only") + version("5.9-0.10", sha256="e644ee640a097ed2d32be03db3603259981656fa459922035a8c531d692acde9") version("5.9-0.3", sha256="31560a8dad791f9c47a673e90d397b3fc60da1a58be1ae1486ace90d988eb55f") version("5.8-3.0", sha256="9beb11b5edab3ab3aa6001daa39668b240a8e0328be9d55db4e23ff88ce3235d") version("5.8-2.0", sha256="106c4f6a6df5159578e929a0141b3cfbaa88141a70703ff59a1fc48a27e2d239") diff --git a/var/spack/repos/builtin/packages/r-rgeos/package.py b/var/spack/repos/builtin/packages/r-rgeos/package.py index fae7ad271e..2122332ecd 100644 --- a/var/spack/repos/builtin/packages/r-rgeos/package.py +++ b/var/spack/repos/builtin/packages/r-rgeos/package.py @@ -30,6 +30,7 @@ class RRgeos(RPackage): cran = "rgeos" + version("0.6-4", sha256="9d03c4de96fd3fad55ff8d1ff8113dcaaa00f15d9d0588e54c9f91751bcede11") version( "0.6-2", sha256="2ee2bb8b0c20d7908ac55d4d1cf8292c624ab836e02599ce1871a249a59fe0af", diff --git a/var/spack/repos/builtin/packages/r-rgexf/package.py b/var/spack/repos/builtin/packages/r-rgexf/package.py index e9c146ced9..7498cd8798 100644 --- a/var/spack/repos/builtin/packages/r-rgexf/package.py +++ b/var/spack/repos/builtin/packages/r-rgexf/package.py @@ -21,6 +21,7 @@ class RRgexf(RPackage): license("MIT") + version("0.16.3", sha256="cddcc58a10092cfea32999d7baaf6eae9b34e649a16627ee0b466a7cf2c339b0") version("0.16.2", sha256="6ee052b0de99d0c7492366b991d345a51b3d0cc890d10a68b8670e1bd4fc8201") version("0.16.0", sha256="2a671df9ac70cfefd4092754317cb28e32a33df345b80e1975bf838e838245ee") version("0.15.3", sha256="2e8a7978d1fb977318e6310ba65b70a9c8890185c819a7951ac23425c6dc8147") diff --git a/var/spack/repos/builtin/packages/r-rgl/package.py b/var/spack/repos/builtin/packages/r-rgl/package.py index 67f0b5e874..37a0a0d4b5 100644 --- a/var/spack/repos/builtin/packages/r-rgl/package.py +++ b/var/spack/repos/builtin/packages/r-rgl/package.py @@ -20,6 +20,7 @@ class RRgl(RPackage): license("GPL-2.0-or-later") + version("1.3.1", sha256="9fea7b59dd7fef9bbd783c745d68325ec753ef412699d168bb6c664a56506d49") version("1.1.3", sha256="4fa246c2ab06261ea81e09a7a489f34174b93359fe74a3db291f8d0eccd38aae") version("0.110.2", sha256="da1118c1990ae161a5787960fb22009601d2ee7d39ca9c97c31c70589bce346d") version("0.108.3.2", sha256="033af3aceade6c21d0a602958fff1c25c21febc7d0e867cf88860cfa25fc3c65") @@ -34,6 +35,7 @@ class RRgl(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r@3.2.0:", type=("build", "run")) depends_on("r@3.3.0:", type=("build", "run"), when="@0.108.3:") + depends_on("r@3.6.0:", type=("build", "run"), when="@1.3.1:") depends_on("r-htmlwidgets", type=("build", "run")) depends_on("r-htmlwidgets@1.6.0:", type=("build", "run"), when="@1.1.3:") depends_on("r-htmltools", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rgooglemaps/package.py b/var/spack/repos/builtin/packages/r-rgooglemaps/package.py index f2931bef81..d3e5913645 100644 --- a/var/spack/repos/builtin/packages/r-rgooglemaps/package.py +++ b/var/spack/repos/builtin/packages/r-rgooglemaps/package.py @@ -16,6 +16,7 @@ class RRgooglemaps(RPackage): cran = "RgoogleMaps" + version("1.5.1", sha256="14fe6c37d935a1c5a9ac063c9c9c59a1e93c6f86907480792302f9a9452cf8a4") version("1.4.5.3", sha256="d1d5ad8db841754af175d4104a05c5c31e5cc445be314a3ac70483c31798680b") version("1.4.3", sha256="44cb62bcd23e5b4807e91c5825352eb8d38aaaeb3b38a8271ca9f21c1e1d4b19") version("1.4.2", sha256="b479996fcb72f067644a7ea7f00325e44e76efd202e84aaab022753c4a6d5584") @@ -23,6 +24,6 @@ class RRgooglemaps(RPackage): depends_on("r@2.10:", type=("build", "run")) depends_on("r-png", type=("build", "run")) - depends_on("r-sp", type=("build", "run"), when="@1.4.5.3:") + depends_on("r-sp", type=("build", "run"), when="@1.4.5.3:1.4.5.3") depends_on("r-rjsonio", type=("build", "run"), when="@1.2.0.5:1.2.0.7") diff --git a/var/spack/repos/builtin/packages/r-rio/package.py b/var/spack/repos/builtin/packages/r-rio/package.py index f120492fe9..473ae6b88f 100644 --- a/var/spack/repos/builtin/packages/r-rio/package.py +++ b/var/spack/repos/builtin/packages/r-rio/package.py @@ -22,15 +22,22 @@ class RRio(RPackage): license("GPL-2.0-only") + version("1.2.2", sha256="51472a286ad82e1cafd4d87d774662650ccf40d788b59dc70e49fe754e045394") version("0.5.29", sha256="9fa63187e1814053e6ed2a164665b4924e08c3453adccb78f7211d403dcc5412") version("0.5.16", sha256="d3eb8d5a11e0a3d26169bb9d08f834a51a6516a349854250629072d59c29d465") depends_on("r@2.15.0:", type=("build", "run")) + depends_on("r@4.0:", when="@1.2:", type=("build", "run")) depends_on("r-foreign", type=("build", "run")) depends_on("r-haven@1.1.2:", type=("build", "run"), when="@0.5.26:") depends_on("r-haven@1.1.0:", type=("build", "run")) depends_on("r-curl@0.6:", type=("build", "run")) + depends_on("r-data-table@1.11.2:", when="@1:", type=("build", "run")) depends_on("r-data-table@1.9.8:", type=("build", "run")) + depends_on("r-lifecycle", when="@1:", type=("build", "run")) + depends_on("r-r-utils", when="@1:", type=("build", "run")) + depends_on("r-readr", when="@1.2.1:", type=("build", "run")) depends_on("r-readxl@0.1.1:", type=("build", "run")) - depends_on("r-openxlsx", type=("build", "run")) + depends_on("r-openxlsx", type=("build", "run"), when="@:0.5.30") depends_on("r-tibble", type=("build", "run")) + depends_on("r-writexl", when="@1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rjags/package.py b/var/spack/repos/builtin/packages/r-rjags/package.py index 3797aa8983..4d0883a909 100644 --- a/var/spack/repos/builtin/packages/r-rjags/package.py +++ b/var/spack/repos/builtin/packages/r-rjags/package.py @@ -16,6 +16,7 @@ class RRjags(RPackage): license("GPL-2.0-only") + version("4-16", sha256="369d393e519ae26219ff44e6a8f07d9310a9bb06fa0ec9dcce33ce7c4bc7e7e7") version("4-14", sha256="313b5df702598ce3bbc5f8b027b654c8489420ca5a4e0a794954ea9f4837e2cb") version("4-13", sha256="f85cc34c5127b828d8a3fa3613ef29f147c868bdaf55eb0f7406c10abbf92b32") version("4-12", sha256="b91f34c3f9ebf78fa44bd661346fbb6f28a01693a7203ac133c98392dd273e10") diff --git a/var/spack/repos/builtin/packages/r-rjava/package.py b/var/spack/repos/builtin/packages/r-rjava/package.py index 0a135ed487..662ae85fd4 100644 --- a/var/spack/repos/builtin/packages/r-rjava/package.py +++ b/var/spack/repos/builtin/packages/r-rjava/package.py @@ -14,6 +14,7 @@ class RRjava(RPackage): cran = "rJava" + version("1.0-11", sha256="9ea0ccf5553d86f7de8649a8324766c4f0810f35b7be561640dd87fd37986417") version("1.0-6", sha256="e290d0493317a5d6c452793e92baa914e37ef03faef19b2e436329b4ec8658c6") version("0.9-13", sha256="5b1688f5044476b34f71d868b222ac5fce3a088f0c2b9e4591c1e48f3d8c75f4") version("0.9-11", sha256="c28ae131456a98f4d3498aa8f6eac9d4df48727008dacff1aa561fc883972c69") diff --git a/var/spack/repos/builtin/packages/r-rjson/package.py b/var/spack/repos/builtin/packages/r-rjson/package.py index 55bfe6a4af..c0c3ea6ae5 100644 --- a/var/spack/repos/builtin/packages/r-rjson/package.py +++ b/var/spack/repos/builtin/packages/r-rjson/package.py @@ -15,6 +15,7 @@ class RRjson(RPackage): license("GPL-2.0-only") + version("0.2.22", sha256="06cdf67b72b6166a6ad399c8176b34f8a5a75fa5257ddbd46a2b99b2f39e1d27") version("0.2.21", sha256="982b56d35ccc0c7db0b20c1d3eab5f5f47c620309646fdc278ff1cc3433ea2e2") version("0.2.20", sha256="3a287c1e5ee7c333ed8385913c0a307daf99335fbdf803e9dcca6e3d5adb3f6c") version("0.2.19", sha256="5c2672461986f2b715416cab92ed262abe9875f31299bc8a1a072ef7c6dd49bc") @@ -25,3 +26,4 @@ class RRjson(RPackage): depends_on("r@3.1.0:", type=("build", "run")) depends_on("r@4.0.0:", type=("build", "run"), when="@0.2.21:") + depends_on("r@4.4.0:", type=("build", "run"), when="@0.2.22:") diff --git a/var/spack/repos/builtin/packages/r-rjsonio/package.py b/var/spack/repos/builtin/packages/r-rjsonio/package.py index 63495d35d3..86833a5368 100644 --- a/var/spack/repos/builtin/packages/r-rjsonio/package.py +++ b/var/spack/repos/builtin/packages/r-rjsonio/package.py @@ -27,6 +27,7 @@ class RRjsonio(RPackage): cran = "RJSONIO" + version("1.3-1.9", sha256="f173034b0c28873f417ee804b9e278aedd92e76eb56c7c6d71b1c02fa1193ece") version("1.3-1.8", sha256="f6f0576d3c7852b16295dfc897feebca064fe5dd29cdce7592f94c56823553f5") version("1.3-1.6", sha256="82d1c9ea7758b2a64ad683f9c46223dcba9aa8146b43c1115bf9aa76a657a09f") version("1.3-1.4", sha256="54142c931e15eca278a02dad5734026bb49d960471eb085008af825352953190") diff --git a/var/spack/repos/builtin/packages/r-rlang/package.py b/var/spack/repos/builtin/packages/r-rlang/package.py index 48a47e1447..6f630c0707 100644 --- a/var/spack/repos/builtin/packages/r-rlang/package.py +++ b/var/spack/repos/builtin/packages/r-rlang/package.py @@ -16,6 +16,7 @@ class RRlang(RPackage): license("MIT") + version("1.1.4", sha256="f2d74527508bf3287102470beb27de0d234c3cbba399c28d3312f2c83c64a6e1") version("1.1.2", sha256="2a0ee1dc6e5c59b283c32db5e74e869922a336197cb406fe92622b6ec66f8092") version("1.1.1", sha256="5e5ec9a7796977216c39d94b1e342e08f0681746657067ba30de11b8fa8ada99") version("1.1.0", sha256="f89859d91c9edc05fd7ccf21163fe53ad58da907ee273a93d5ab004a8649335b") diff --git a/var/spack/repos/builtin/packages/r-rlist/package.py b/var/spack/repos/builtin/packages/r-rlist/package.py new file mode 100644 index 0000000000..672f6b7586 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-rlist/package.py @@ -0,0 +1,27 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RRlist(RPackage): + """Provides a set of functions for data manipulation with + list objects, including mapping, filtering, grouping, sorting, + updating, searching, and other useful functions. Most functions + are designed to be pipeline friendly so that data processing with + lists can be chained.""" + + homepage = "https://renkun-ken.github.io/rlist/" + cran = "rlist" + + license("MIT", checked_by="wdconinc") + + version("0.4.6.2", sha256="ebde658d897c8a27a90ebb892b9e2bad15e2ad75557a7352fb08cbb5604e0997") + + depends_on("r@2.15:", type=("build", "run")) + depends_on("r-yaml", type=("build", "run")) + depends_on("r-jsonlite", type=("build", "run")) + depends_on("r-xml", type=("build", "run")) + depends_on("r-data-table", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rmariadb/package.py b/var/spack/repos/builtin/packages/r-rmariadb/package.py index 740d434eaf..231701e2bb 100644 --- a/var/spack/repos/builtin/packages/r-rmariadb/package.py +++ b/var/spack/repos/builtin/packages/r-rmariadb/package.py @@ -15,6 +15,7 @@ class RRmariadb(RPackage): cran = "RMariaDB" + version("1.3.2", sha256="7c87ef0623218b9e79dd6a9b1a25f495520289603ca48f54ea45309bd8826828") version("1.2.2", sha256="c97c61ace584f9ad9929d3e3f366556e0eecad12bc98ea2979563a01475f468e") version("1.2.1", sha256="c9176a096854ce33a98ce0faef0065c50b5d356174f90cea742c70e130cf5f0c") version("1.1.0", sha256="9ffa63a15052876a51a7996ca4e6a5b7b937f594b5cc7ca5a86f43789e22a956") @@ -27,11 +28,12 @@ class RRmariadb(RPackage): depends_on("r-dbi@1.1.3:", type=("build", "run"), when="@1.2.2:") depends_on("r-hms@0.5.0:", type=("build", "run")) depends_on("r-lubridate", type=("build", "run"), when="@1.1.0:") - depends_on("r-rcpp@0.12.4:", type=("build", "run")) + depends_on("r-cpp11", type=("build", "run"), when="@1.3.0:") depends_on("r-rlang", type=("build", "run"), when="@1.2.1:") depends_on("r-plogr", type=("build", "run")) depends_on("mariadb-client") + depends_on("r-rcpp@0.12.4:", type=("build", "run"), when="@:1.2.2") depends_on("r-bh", type=("build", "run"), when="@:1.1.0") # Set the library explicitly to prevent configure from finding a system diff --git a/var/spack/repos/builtin/packages/r-rmarkdown/package.py b/var/spack/repos/builtin/packages/r-rmarkdown/package.py index 2b4e444e0e..767288056b 100644 --- a/var/spack/repos/builtin/packages/r-rmarkdown/package.py +++ b/var/spack/repos/builtin/packages/r-rmarkdown/package.py @@ -16,6 +16,7 @@ class RRmarkdown(RPackage): license("GPL-3.0-only") + version("2.28", sha256="a102a503a92d4203038c5a0675451daf9460df18efcabd5c23283ecefe75a085") version("2.21", sha256="c25b20a422d11a115c93460f41c488874002154abb349b14e0d6518682fdac28") version("2.17", sha256="aa576c458ec4c2e8468aaa4e3f60202d8d9c7ef54fa01d6b2d243bffee08c4be") version("2.16", sha256="d3d34e0419c419d3ab20eb60952a0f0f4c391d202277af55dcd673d25561fa71") @@ -38,7 +39,7 @@ class RRmarkdown(RPackage): depends_on("r-jquerylib", type=("build", "run"), when="@2.11:") depends_on("r-jsonlite", type=("build", "run")) depends_on("r-knitr@1.22:", type=("build", "run")) - depends_on("r-stringr@1.2.0:", type=("build", "run"), when="@1.6:") + depends_on("r-knitr@1.43:", type=("build", "run"), when="@2.26:") depends_on("r-tinytex@0.11:", type=("build", "run"), when="@1.10:") depends_on("r-tinytex@0.31:", type=("build", "run"), when="@2.8:") depends_on("r-xfun", type=("build", "run"), when="@1.13:") @@ -54,3 +55,4 @@ class RRmarkdown(RPackage): depends_on("r-mime", type=("build", "run"), when="@1.8:1.14") depends_on("r-catools", type=("build", "run"), when="@:1.7") depends_on("r-base64enc", type=("build", "run"), when="@:1.14") + depends_on("r-stringr@1.2.0:", type=("build", "run"), when="@1.6:2.25") diff --git a/var/spack/repos/builtin/packages/r-rmpfr/package.py b/var/spack/repos/builtin/packages/r-rmpfr/package.py index 7388730fc1..04b423d5ab 100644 --- a/var/spack/repos/builtin/packages/r-rmpfr/package.py +++ b/var/spack/repos/builtin/packages/r-rmpfr/package.py @@ -17,6 +17,7 @@ class RRmpfr(RPackage): cran = "Rmpfr" + version("0.9-5", sha256="bce9a2729efcd329a13910e2ecb4675b4626dd3322cd01b01cb835d516a5f31b") version("0.9-2", sha256="ed63da32f3b970900c87cdb728eb16ed9fb0c79114cdecdc09e573f50ff7175e") version("0.8-9", sha256="cfee5ab47d49c6433c372a267f7d849c8f7c61a84e00d08afb047eaafcdbbc8a") version("0.8-7", sha256="93c2db785ff705dcfc6fa7f0373c2426cdc2ef72ceb5b294edeb2952775f57d2") diff --git a/var/spack/repos/builtin/packages/r-rmpi/package.py b/var/spack/repos/builtin/packages/r-rmpi/package.py index 88b9a30175..2a706a42e1 100644 --- a/var/spack/repos/builtin/packages/r-rmpi/package.py +++ b/var/spack/repos/builtin/packages/r-rmpi/package.py @@ -14,6 +14,7 @@ class RRmpi(RPackage): cran = "Rmpi" + version("0.7-2", sha256="8591fa9f50de52535a32b36e7ed142c6ca4e03fdfdbef79a1e27a63ed5322eef") version("0.7-1", sha256="17dae27dea9317aacabc2255dfcf2538fb3195472cedd521256ced9a20dd2dc1") version("0.6-9.2", sha256="358ac1af97402e676f209261a231f36a35e60f0301edf8ca53dac11af3c3bd1a") version("0.6-9", sha256="b2e1eac3e56f6b26c7ce744b29d8994ab6507ac88df64ebbb5af439414651ee6") @@ -24,10 +25,13 @@ class RRmpi(RPackage): depends_on("mpi") # The following MPI types are not supported - conflicts("^intel-mpi") - conflicts("^intel-parallel-studio") - conflicts("^mvapich2") - conflicts("^spectrum-mpi") + conflicts("^[virtuals=mpi] intel-mpi") + conflicts("^[virtuals=mpi] intel-parallel-studio") + conflicts("^[virtuals=mpi] mvapich2") + conflicts("^[virtuals=mpi] spectrum-mpi") + + # Rmpi's Open MPI implementation depends on v4.x ORTE runtime environment + conflicts("^[virtuals=mpi] openmpi@5:") def configure_args(self): spec = self.spec diff --git a/var/spack/repos/builtin/packages/r-rms/package.py b/var/spack/repos/builtin/packages/r-rms/package.py index a14c2404c2..289f9dd9a9 100644 --- a/var/spack/repos/builtin/packages/r-rms/package.py +++ b/var/spack/repos/builtin/packages/r-rms/package.py @@ -27,6 +27,7 @@ class RRms(RPackage): license("GPL-2.0-or-later") + version("6.8-1", sha256="9d38545749430763c242bae1181ce24a7f6f6b244e4c69348ab200b83925596a") version("6.6-0", sha256="f3abadb94339f3aedadd27e1aceade069bcb53c94bf246626b0dc94b16b6625c") version("6.3-0", sha256="6c41eb670daf5e4391cc2f2a19e20a591f90769c124300a7ccf555820140d3f9") version("6.2-0", sha256="10d58cbfe39fb434223834e29e5248c9384cded23e6267cfc99367d0f5ee24b6") @@ -38,9 +39,11 @@ class RRms(RPackage): version("5.1-1", sha256="c489948df5c434b40bcf5288844f5b4e08d157f36939d09230c1600f88d1bfe3") depends_on("r@3.5.0:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@6.8-0:") depends_on("r-hmisc@4.3-0:", type=("build", "run")) depends_on("r-hmisc@4.7-0:", type=("build", "run"), when="@6.3-0:") depends_on("r-hmisc@4.8-0:", type=("build", "run"), when="@6.6-0:") + depends_on("r-hmisc@5.1-0:", type=("build", "run"), when="@6.8-0:") depends_on("r-survival@3.1-6:", type=("build", "run")) depends_on("r-survival@3.1-12:", type=("build", "run"), when="@6.1-0:") depends_on("r-ggplot2@2.2:", type=("build", "run")) @@ -56,6 +59,7 @@ class RRms(RPackage): depends_on("r-cluster", type=("build", "run"), when="@6.1-0:") depends_on("r-digest", type=("build", "run"), when="@6.1-0:") depends_on("r-knitr", type=("build", "run"), when="@6.6-0:") - depends_on("r-kableextra", type=("build", "run"), when="@6.6-0:") depends_on("r-colorspace", type=("build", "run"), when="@6.6-0:") depends_on("r-lattice", type=("build", "run"), when="@:6.3-0") + + depends_on("r-kableextra", type=("build", "run"), when="@6.6-0:6.7-0") diff --git a/var/spack/repos/builtin/packages/r-rmysql/package.py b/var/spack/repos/builtin/packages/r-rmysql/package.py index 2e3639efdd..fba8218785 100644 --- a/var/spack/repos/builtin/packages/r-rmysql/package.py +++ b/var/spack/repos/builtin/packages/r-rmysql/package.py @@ -15,6 +15,7 @@ class RRmysql(RPackage): cran = "RMySQL" + version("0.10.27", sha256="f1735b689cd9bdb9c776a16138eaa1f6c5cbdbab5c1d292e1240e3bbf105bfab") version("0.10.25", sha256="ed130f9bd80ea9fd5b4fdbb6fa094c35646354507de68eb3d19a3cbc8b5a4794") version("0.10.24", sha256="ca1b9aacab6d76866ba09210ae881c3a7555bd5144ea0a0a446fceff80637241") version("0.10.23", sha256="f4ac7ed4fba83749819c07ce32d53ee024cf1cedebbda3b832644bff9edf4a15") diff --git a/var/spack/repos/builtin/packages/r-rnoaa/package.py b/var/spack/repos/builtin/packages/r-rnoaa/package.py index 5e059a6b53..b8551eab7c 100644 --- a/var/spack/repos/builtin/packages/r-rnoaa/package.py +++ b/var/spack/repos/builtin/packages/r-rnoaa/package.py @@ -22,6 +22,7 @@ class RRnoaa(RPackage): license("MIT") + version("1.4.0", sha256="a1869303b3fc14d9b3674451c0ce9331ddc26110b7474fe419ac37f7ffb63097") version("1.3.8", sha256="57974b48162637e98888f041d6f0e580d3c60bd5008af2d2bc659491f0deb98a") version("1.3.0", sha256="4c421ad6e4c2b25e4dea5351c338aed70bea6e382562412d1dad825a50b0d161") version("0.8.4", sha256="fb9ae771111dd5f638c1eff3290abad2ff9cc7e68a6678bf2414433ebed2dbbf") diff --git a/var/spack/repos/builtin/packages/r-robust/package.py b/var/spack/repos/builtin/packages/r-robust/package.py index a5bf5c16e1..37ad526b3d 100644 --- a/var/spack/repos/builtin/packages/r-robust/package.py +++ b/var/spack/repos/builtin/packages/r-robust/package.py @@ -17,6 +17,7 @@ class RRobust(RPackage): license("GPL-3.0-or-later") + version("0.7-5", sha256="a3c02a9c9101b966907cb52b3193c4ef51864928ad99c3351edf5390532c1acc") version("0.7-1", sha256="efaac70c6399b2787938e23ea89039b4a6043e76601bd794ba0ddda1edee65df") version("0.7-0", sha256="5e1aac30e185e416c22445663704f39433af9fdb48452185f2c9beb3528084b9") version("0.6-1", sha256="496fd225f6bc6f734e338308f18475125aaf691b39e25308bddb284d3106117d") diff --git a/var/spack/repos/builtin/packages/r-robustbase/package.py b/var/spack/repos/builtin/packages/r-robustbase/package.py index a05863c095..37db5ba90f 100644 --- a/var/spack/repos/builtin/packages/r-robustbase/package.py +++ b/var/spack/repos/builtin/packages/r-robustbase/package.py @@ -19,6 +19,7 @@ class RRobustbase(RPackage): license("GPL-2.0-or-later") + version("0.99-4", sha256="a978d04fcd4bee7a4ebfa9f05e9abb4a1ca4d970867229a90698bed2fbf40cbc") version("0.95-1", sha256="862cd26db3ecdf34ab47c52d355fd65ffebbff448aea17999a9b95a1f13ba3ea") version("0.95-0", sha256="5cfaea1c46df6d45086614fea5f152c8da8ebfcadf33bb8df5b82e742eef9724") version("0.93-9", sha256="d75fb5075463fec61d063bced7003936e9198492328b6fae15f67e8415713c45") diff --git a/var/spack/repos/builtin/packages/r-rodbc/package.py b/var/spack/repos/builtin/packages/r-rodbc/package.py index e16a948741..d0fdeba36c 100644 --- a/var/spack/repos/builtin/packages/r-rodbc/package.py +++ b/var/spack/repos/builtin/packages/r-rodbc/package.py @@ -15,6 +15,7 @@ class RRodbc(RPackage): license("GPL-2.0-or-later") + version("1.3-23", sha256="15cdd15ac0afb3294420c7593b04a5e4e31df175418b22a8ec075bf5855e0f3b") version("1.3-20", sha256="7f157bd1ca2502bea4247260aac5b0f3aa1026ddffe5c50b026f2d59c210fbd6") version("1.3-19", sha256="3afcbd6877cd8b7c8df4a94bacd041a51e5ac607810acb88efd380b45d2d4efe") version("1.3-17", sha256="469fc835f65c344d5c3eaa097ff278ee8e9f12f845722a9aad340115faa704f7") diff --git a/var/spack/repos/builtin/packages/r-roxygen2/package.py b/var/spack/repos/builtin/packages/r-roxygen2/package.py index 60df397a81..97e60dac2d 100644 --- a/var/spack/repos/builtin/packages/r-roxygen2/package.py +++ b/var/spack/repos/builtin/packages/r-roxygen2/package.py @@ -18,6 +18,7 @@ class RRoxygen2(RPackage): license("MIT") + version("7.3.2", sha256="b788879f9132b7e2e656f442a6c592314676a9bf32d6a0a56e156cfa1ada011c") version("7.2.3", sha256="d844fab977d2575ab942fa1309ac7ff67f35f099a75d8b41c79efe6ea10416da") version("7.2.1", sha256="d2f0342591dc2b561fad8f6cf6fb3001e5e0bdd02be68bb2c6315f6bb82cda21") version("7.2.0", sha256="2ebfcfd567b9db6c606c6d42be1645b4e987f987995a2ad8954fa963a519448b") @@ -31,6 +32,7 @@ class RRoxygen2(RPackage): depends_on("r@3.1:", type=("build", "run"), when="@6.1.0:") depends_on("r@3.2:", type=("build", "run"), when="@7.1.0:") depends_on("r@3.3:", type=("build", "run"), when="@7.1.2:") + depends_on("r@3.6:", type=("build", "run"), when="@7.3.0:") depends_on("r-brew", type=("build", "run")) depends_on("r-cli@3.3.0:", type=("build", "run"), when="@7.2.0:") depends_on("r-commonmark", type=("build", "run")) @@ -39,6 +41,7 @@ class RRoxygen2(RPackage): depends_on("r-pkgload@1.0.2:", type=("build", "run")) depends_on("r-purrr", type=("build", "run")) depends_on("r-purrr@0.3.3:", type=("build", "run"), when="@7.1.0:") + depends_on("r-purrr@1.0.0:", type=("build", "run"), when="@7.3.0:") depends_on("r-r6@2.1.2:", type=("build", "run")) depends_on("r-rlang", type=("build", "run"), when="@7.1.0:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@7.2.0:") diff --git a/var/spack/repos/builtin/packages/r-rpart-plot/package.py b/var/spack/repos/builtin/packages/r-rpart-plot/package.py index 7ed71d89b9..3a8b649d9b 100644 --- a/var/spack/repos/builtin/packages/r-rpart-plot/package.py +++ b/var/spack/repos/builtin/packages/r-rpart-plot/package.py @@ -14,6 +14,7 @@ class RRpartPlot(RPackage): cran = "rpart.plot" + version("3.1.2", sha256="3dca2a5d1a8e5eb5129fd6efce9c5f6b2fa241bfb65f2a8823a8db89f4b422b2") version("3.1.1", sha256="30736240058df21a96d10912a091d938f821d521a3bc4efb9aa4ef6fb233024d") version("3.1.0", sha256="2aaba0c0cabbc17aca9085248b0ad74ee7ff2b8f729e020e84b3917de174c15e") version("3.0.9", sha256="1150f5e9899b3b31b17160617cd99c3ad340c8361aeb229264a7a3a3a28015a4") diff --git a/var/spack/repos/builtin/packages/r-rpart/package.py b/var/spack/repos/builtin/packages/r-rpart/package.py index 24fd3ebd14..36bd41d99c 100644 --- a/var/spack/repos/builtin/packages/r-rpart/package.py +++ b/var/spack/repos/builtin/packages/r-rpart/package.py @@ -17,6 +17,7 @@ class RRpart(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("4.1.23", sha256="f9b89aed6aa6cea656a2dcb271574e969ce2b1c98beb07bd91e17339f6daabaf") version("4.1.19", sha256="fe723ed0b5583fae8b40e6fecc29b357229cb11f2339b02a4e4f812926249565") version("4.1.16", sha256="27ec75258a5a3459ad999f5f36760ead974930744249605bf8465f234f31425c") version("4.1-15", sha256="2b8ebe0e9e11592debff893f93f5a44a6765abd0bd956b0eb1f70e9394cfae5c") diff --git a/var/spack/repos/builtin/packages/r-rpostgres/package.py b/var/spack/repos/builtin/packages/r-rpostgres/package.py index 0e829406e5..c7adf3b7e1 100644 --- a/var/spack/repos/builtin/packages/r-rpostgres/package.py +++ b/var/spack/repos/builtin/packages/r-rpostgres/package.py @@ -14,6 +14,7 @@ class RRpostgres(RPackage): cran = "RPostgres" + version("1.4.7", sha256="3dd1f1d83bd8a25a0a86532c6971072fccea7b1769f601ad9daa8c9aa8f66924") version("1.4.5", sha256="70ff848cba51ddad4642a20e01cda1033e6f218b015a13380c30604bbd18c797") version("1.4.4", sha256="c9cc0648c432f837fd0eb4922db4903357244d5a2cedd04ea236f249b08acdfc") version("1.4.3", sha256="a5be494a54b6e989fadafdc6ee2dc5c4c15bb17bacea9ad540b175c693331be2") @@ -22,14 +23,16 @@ class RRpostgres(RPackage): depends_on("r@3.1.0:", type=("build", "run")) depends_on("r-bit64", type=("build", "run")) depends_on("r-blob@1.2.0:", type=("build", "run")) + depends_on("r-cpp11", type=("build", "run"), when="@1.4.6:") depends_on("r-dbi@1.1.0:", type=("build", "run")) + depends_on("r-dbi@1.2.0:", type=("build", "run"), when="@1.4.7:") depends_on("r-hms@0.5.0:", type=("build", "run")) depends_on("r-hms@1.0.0:", type=("build", "run"), when="@1.4.3:") depends_on("r-lubridate", type=("build", "run")) - depends_on("r-rcpp@0.11.4.2:", type=("build", "run")) - depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@1.4.3:") depends_on("r-withr", type=("build", "run")) depends_on("r-plogr@0.2.0:", type=("build", "run")) depends_on("postgresql@9.0:") + depends_on("r-rcpp@0.11.4.2:", type=("build", "run"), when="@:1.4.5") + depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@1.4.3:1.4.5") depends_on("r-bh", type=("build", "run"), when="@:1.3.1") diff --git a/var/spack/repos/builtin/packages/r-rpostgresql/package.py b/var/spack/repos/builtin/packages/r-rpostgresql/package.py index 74715c6c5d..74cd1832a1 100644 --- a/var/spack/repos/builtin/packages/r-rpostgresql/package.py +++ b/var/spack/repos/builtin/packages/r-rpostgresql/package.py @@ -23,6 +23,7 @@ class RRpostgresql(RPackage): license("PostgreSQL") + version("0.7-6", sha256="385939708b6a3657663409f91e165ded0ff5268d1dc6225e0f9b34764baf2d2c") version("0.7-5", sha256="6b5401ee55bd948ae7bc84520d789ceb422533a7d5e5bd6e10e3b54447f29fa1") version("0.7-4", sha256="b6adf60094f2b03dff1959147cde7f61c2f4c4576d77b2a263c63f8e3cd556c6") version("0.7-3", sha256="bdbca10329aeb357f05364772964716dfb5ce2470f7eb4a33770862b6ded71b9") diff --git a/var/spack/repos/builtin/packages/r-rprojroot/package.py b/var/spack/repos/builtin/packages/r-rprojroot/package.py index 0d6bea6d61..3d081b81fc 100644 --- a/var/spack/repos/builtin/packages/r-rprojroot/package.py +++ b/var/spack/repos/builtin/packages/r-rprojroot/package.py @@ -17,6 +17,7 @@ class RRprojroot(RPackage): license("MIT") + version("2.0.4", sha256="b5f463fb25a24dac7a4ca916be57dbe22b5262e1f41e53871ca83e57d4336e99") version("2.0.3", sha256="50604247470e910cecfe9b76df754bf96a0d701f81b732f7aa9c90a20d30f897") version("2.0.2", sha256="5fa161f0d4ac3b7a99dc6aa2d832251001dc92e93c828593a51fe90afd019e1f") version("1.3-2", sha256="df5665834941d8b0e377a8810a04f98552201678300f168de5f58a587b73238b") diff --git a/var/spack/repos/builtin/packages/r-rrblup/package.py b/var/spack/repos/builtin/packages/r-rrblup/package.py index 85db94fb3e..0759a2f0a3 100644 --- a/var/spack/repos/builtin/packages/r-rrblup/package.py +++ b/var/spack/repos/builtin/packages/r-rrblup/package.py @@ -17,6 +17,7 @@ class RRrblup(RPackage): cran = "rrBLUP" + version("4.6.3", sha256="cd2a257ecb8252f352fd09189b538db62e4de4a51091cf392c18966c3f0c80cd") version("4.6.2", sha256="860f5e3f889593b6737f386743a2679322ec7d3557bea8e25482fd6cb745adff") version("4.6.1", sha256="e9230e74cc430a83ac5567071cb1c7f00b35c368f7d79bcc1cfde7225446c4db") version("4.6", sha256="28b475a1466fcdc1780caace75cf34155338fda496cebd5799315598a4bc84af") diff --git a/var/spack/repos/builtin/packages/r-rrcov/package.py b/var/spack/repos/builtin/packages/r-rrcov/package.py index a0822cb4e6..71895d0cf2 100644 --- a/var/spack/repos/builtin/packages/r-rrcov/package.py +++ b/var/spack/repos/builtin/packages/r-rrcov/package.py @@ -23,6 +23,7 @@ class RRrcov(RPackage): license("GPL-3.0-or-later") + version("1.7-6", sha256="b8a2c07c42e4e76e9f90cb016cb72a40f6d2ce1f10d1753c06e3344f38e148de") version("1.7-2", sha256="0f01ed07cbc9e55dfcba27040a3f72237fb2fb86eda899472c2f96500220ecae") version("1.7-1", sha256="e115a09997b46c7eed33017f748632c7d50a95ad621f1f452f22dfc714c9a4e5") version("1.7-0", sha256="cbcca84a82d63fa50556aa8db29312b9bb588a638eb306ce4a81c271529228fd") diff --git a/var/spack/repos/builtin/packages/r-rrpp/package.py b/var/spack/repos/builtin/packages/r-rrpp/package.py index b9de4ebda6..a0e839f3c5 100644 --- a/var/spack/repos/builtin/packages/r-rrpp/package.py +++ b/var/spack/repos/builtin/packages/r-rrpp/package.py @@ -25,6 +25,7 @@ class RRrpp(RPackage): cran = "RRPP" + version("2.0.3", sha256="ff70976d4656c39bb02d842668c4d283bc2a26294d3aa2c6590f86a87fd8a2b5") version("1.3.1", sha256="50c7d4b20fb84088b0440c2f55ed146bcb35b0d9dda8581dca28e30b2fecbcd5") version("1.2.3", sha256="6eee638af94d69d4dd471a5e01243622dedef3c0c95b3363e21e8e11f0ea564c") version("1.1.2", sha256="2b563f3db9e349abe481444f48a1a3e6bc1154de8259b7a7060ab588287e80c0") @@ -34,6 +35,7 @@ class RRrpp(RPackage): version("0.3.0", sha256="34fea6ce7a78e4f38398d3b99585bab11a8171bc8b9a4e461b6d984ed1373739") depends_on("r@3.5.0:", type=("build", "run"), when="@0.6.2:") + depends_on("r@4.4.0:", type=("build", "run"), when="@2.0.3:") depends_on("r-ape", type=("build", "run"), when="@0.6.2:") depends_on("r-ggplot2", type=("build", "run"), when="@1.1.2:") depends_on("r-matrix", type=("build", "run"), when="@1.1.2:") diff --git a/var/spack/repos/builtin/packages/r-rsconnect/package.py b/var/spack/repos/builtin/packages/r-rsconnect/package.py index 2e5b56d586..bb7db9df32 100644 --- a/var/spack/repos/builtin/packages/r-rsconnect/package.py +++ b/var/spack/repos/builtin/packages/r-rsconnect/package.py @@ -17,6 +17,7 @@ class RRsconnect(RPackage): license("GPL-2.0-only") + version("1.3.1", sha256="47de8a832da493e2a1b3243fb42459a53eb193f75a1143348b7d8c7478cb5557") version("0.8.29", sha256="852899d2aaf90bcedf4d191a9e00c770e8ee4233235169fc97e6aa636de01c43") version("0.8.28", sha256="25b9a947772ada9593da5c48297b7a7dd0e11aa73fbb9a282631c75ec49616e0") version("0.8.27", sha256="0a44d5605fc7cd6855ea0235d662e4a323a24a2c214cc4f1696afbca3a8f169c") @@ -25,13 +26,19 @@ class RRsconnect(RPackage): version("0.8.17", sha256="64767a4d626395b7871375956a9f0455c3d64ff6e779633b0e554921d85da231") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-curl", type=("build", "run")) + depends_on("r-cli", type=("build", "run"), when="@1.0.0:") depends_on("r-digest", type=("build", "run")) depends_on("r-jsonlite", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@1.0.0:") depends_on("r-openssl", type=("build", "run")) depends_on("r-openssl@2.0.0:", type=("build", "run"), when="@0.8.26:") depends_on("r-packrat@0.6:", type=("build", "run"), when="@0.8.18:") depends_on("r-packrat@0.5:", type=("build", "run")) depends_on("r-packrat@0.6:", type=("build", "run"), when="@0.8.26:") + depends_on("r-pki", type=("build", "run"), when="@1.2.2:") + depends_on("r-renv@1.0.0:", type=("build", "run"), when="@1.0.0:") + depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.0.0:") depends_on("r-rstudioapi@0.5:", type=("build", "run")) depends_on("r-yaml@2.1.5:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rsnns/package.py b/var/spack/repos/builtin/packages/r-rsnns/package.py index 75c5dd094b..a0323c1d76 100644 --- a/var/spack/repos/builtin/packages/r-rsnns/package.py +++ b/var/spack/repos/builtin/packages/r-rsnns/package.py @@ -20,6 +20,7 @@ class RRsnns(RPackage): cran = "RSNNS" + version("0.4-17", sha256="424557d7326889e09e31e04d2a9b7224bed0bb4aa6f9e5433d7ce4fe04a35afc") version("0.4-15", sha256="4a4286444f50b28fb6294b8b49250fa6c43c8fddf2ee0550a3ae59a4212ec1b3") version("0.4-14", sha256="7f6262cb2b49b5d5979ccce9ded9cbb2c0b348fd7c9eabc1ea1d31c51a102c20") version("0.4-12", sha256="b18dfeda71573bc92c6888af72da407651bff7571967965fd3008f0d331743b9") diff --git a/var/spack/repos/builtin/packages/r-rspectra/package.py b/var/spack/repos/builtin/packages/r-rspectra/package.py index 76a264fd1c..68b56dff7d 100644 --- a/var/spack/repos/builtin/packages/r-rspectra/package.py +++ b/var/spack/repos/builtin/packages/r-rspectra/package.py @@ -22,6 +22,7 @@ class RRspectra(RPackage): cran = "RSpectra" + version("0.16-2", sha256="a2f149d79519fee79dabe1b174dfb847a916045315d5927a93cc6b005522aa7e") version("0.16-1", sha256="cba5d3403d6a7d0e27abf6279fbfea6e0d0fe36b28c688bbadb8eafb3841329a") version("0.16-0", sha256="aaf1cfc9ffe3a4c6684247899924e1c18306971dfef4bae1dc596a2fb42a64a9") version("0.15-0", sha256="1ad5698201007044a0420cb10b7c48e94312a8a1d22b9d946d5de1c6743969a9") diff --git a/var/spack/repos/builtin/packages/r-rsqlite/package.py b/var/spack/repos/builtin/packages/r-rsqlite/package.py index f81bdf06ac..2fe5dcc456 100644 --- a/var/spack/repos/builtin/packages/r-rsqlite/package.py +++ b/var/spack/repos/builtin/packages/r-rsqlite/package.py @@ -15,6 +15,7 @@ class RRsqlite(RPackage): cran = "RSQLite" + version("2.3.7", sha256="25e0572589e64264fe4e5d0495f5d85d977bacbb93a3fc631ede5b078db294ce") version("2.3.1", sha256="9ed23e160c401c14e41c40e9930f72697172b2c72933c2d2725a05e81e1f34ca") version("2.2.18", sha256="62196adb62ad8ec73ddce573e5391686e9359566e365b123ac4f299809944bea") version("2.2.14", sha256="2ae36a875ebc02497985b2ad9ddc6a5434f576e2ab25769580749d9e4f3b607c") @@ -30,6 +31,8 @@ class RRsqlite(RPackage): depends_on("r-blob@1.2.0:", type=("build", "run")) depends_on("r-dbi@1.0.0:", type=("build", "run")) depends_on("r-dbi@1.1.0:", type=("build", "run"), when="@2.2.10:") + depends_on("r-dbi@1.2.0:", type=("build", "run"), when="@2.3.5:") + depends_on("r-rlang", type=("build", "run"), when="@2.3.4:") depends_on("r-memoise", type=("build", "run")) depends_on("r-pkgconfig", type=("build", "run")) depends_on("r-plogr@0.2.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-rstan/package.py b/var/spack/repos/builtin/packages/r-rstan/package.py index 00da44c08d..713ff0a225 100644 --- a/var/spack/repos/builtin/packages/r-rstan/package.py +++ b/var/spack/repos/builtin/packages/r-rstan/package.py @@ -23,6 +23,7 @@ class RRstan(RPackage): license("GPL-3.0-or-later") + version("2.32.6", sha256="3390d00191bbd3b0739dd19fe437b99a041a6b04be208877b48419d1348a1a70") version("2.21.8", sha256="b2d4edc315419037970c9fa2e8740b934966d88d40548152811f3d4a28475075") version("2.21.7", sha256="4495221310d390925b665c32e05ffabd3ae8857225bda65131a7ed2be41d6d45") version("2.21.5", sha256="86e4fe562d8ddcd0b02336f35a420fa8786dd21de7ca2bebb4ed6e9c252bb9ea") @@ -38,18 +39,29 @@ class RRstan(RPackage): depends_on("r@3.4.0:", type=("build", "run"), when="@2.18.1:") depends_on("r-stanheaders@2.18.1:", type=("build", "run")) depends_on("r-stanheaders@2.21.0:", type=("build", "run"), when="@2.21.2:") + depends_on("r-stanheaders@2.32.0:", type=("build", "run"), when="@2.26.23:") depends_on("r-ggplot2@2.0.0:", type=("build", "run")) depends_on("r-ggplot2@3.0.0:", type=("build", "run"), when="@2.21.2:") + depends_on("r-ggplot2@3.3.5:", type=("build", "run"), when="@2.26.23:") depends_on("r-inline", type=("build", "run")) + depends_on("r-inline@0.3.19:", type=("build", "run"), when="@2.26.23:") depends_on("r-gridextra@2.0.0:", type=("build", "run")) + depends_on("r-gridextra@2.3:", type=("build", "run"), when="@2.26.23:") depends_on("r-rcpp@0.12.0:", type=("build", "run")) + depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@2.26.23:") depends_on("r-rcppparallel@5.0.1:", type=("build", "run"), when="@2.21.2:") + depends_on("r-rcppparallel@5.1.4:", type=("build", "run"), when="@2.26.23:") depends_on("r-loo@2.0.0:", type=("build", "run"), when="@2.18:") depends_on("r-loo@2.3.0:", type=("build", "run"), when="@2.21.2:") + depends_on("r-loo@2.4.1:", type=("build", "run"), when="@2.26.23:") depends_on("r-pkgbuild", type=("build", "run"), when="@2.18:") + depends_on("r-pkgbuild@1.2.0:", type=("build", "run"), when="@2.26.23:") + depends_on("r-quickjsr", type=("build", "run"), when="@2.26.23:") depends_on("r-rcppeigen@0.3.3.3.0:", type=("build", "run")) + depends_on("r-rcppeigen@0.3.4.0.0:", type=("build", "run"), when="@2.26.23:") depends_on("r-bh@1.69.0:", type=("build", "run")) depends_on("r-bh@1.72.0-2:", type=("build", "run"), when="@2.21.2:") + depends_on("r-bh@1.75.0-0:", type=("build", "run"), when="@2.26.23:") depends_on("gmake", type="build") depends_on("pandoc", type="build") diff --git a/var/spack/repos/builtin/packages/r-rstantools/package.py b/var/spack/repos/builtin/packages/r-rstantools/package.py index f2acce430c..ab14cf382e 100644 --- a/var/spack/repos/builtin/packages/r-rstantools/package.py +++ b/var/spack/repos/builtin/packages/r-rstantools/package.py @@ -19,6 +19,7 @@ class RRstantools(RPackage): license("GPL-3.0-or-later") + version("2.4.0", sha256="bff72ca2f0352c6c5d2868823e286fdb73a6ead74508a4124cbcb222c83b4faa") version("2.3.1", sha256="82d4f2e884ffc894463bd37765606d5a9bef2ee631758840ec58636acdca6975") version("2.2.0", sha256="cb810baeb90c67668361b666c6862df9917aff6aaec63d2c3a485f28407c4eb7") version("2.1.1", sha256="c95b15de8ec577eeb24bb5206e7b685d882f88b5e6902efda924b7217f463d2d") diff --git a/var/spack/repos/builtin/packages/r-rstudioapi/package.py b/var/spack/repos/builtin/packages/r-rstudioapi/package.py index f581b5dd5c..3f56a5135e 100644 --- a/var/spack/repos/builtin/packages/r-rstudioapi/package.py +++ b/var/spack/repos/builtin/packages/r-rstudioapi/package.py @@ -16,6 +16,7 @@ class RRstudioapi(RPackage): license("MIT") + version("0.16.0", sha256="74ffa867199e87a54386fbd26919233371f314f73d7338dd4e4695708fed4fe6") version("0.14", sha256="469d0987b1ad728a96c363a422fba712a5cebc8b11a5f7e953b4a671044dafc4") version("0.13", sha256="aac35bbdcb4a8e8caba943bc8a2b98120e8940b80cd1020224bb1a26ff776d8b") version("0.11", sha256="13e07fb7e2eba8cf1d885db2721901d676d219a1042d7ef5d166125e4905306b") diff --git a/var/spack/repos/builtin/packages/r-rtsne/package.py b/var/spack/repos/builtin/packages/r-rtsne/package.py index 3949660dff..48d9e44a32 100644 --- a/var/spack/repos/builtin/packages/r-rtsne/package.py +++ b/var/spack/repos/builtin/packages/r-rtsne/package.py @@ -15,6 +15,7 @@ class RRtsne(RPackage): cran = "Rtsne" + version("0.17", sha256="3aae6814d6c6d406785145f07374135652f2b26a58690dfd4bfbc8365dc5590b") version("0.16", sha256="52a05adc826c28212e97d11c54eba3fec45d14eb52039c0f47f62a8e338ffbd5") version("0.15", sha256="56376e4f0a382fad3d3d40e2cb0562224be5265b827622bcd235e8fc63df276c") version("0.13", sha256="1c3bffe3bd11733ee4fe01749c293669daafda1af2ec74f9158f6080625b999d") diff --git a/var/spack/repos/builtin/packages/r-runit/package.py b/var/spack/repos/builtin/packages/r-runit/package.py index 9c88a53ce5..8de30e09b9 100644 --- a/var/spack/repos/builtin/packages/r-runit/package.py +++ b/var/spack/repos/builtin/packages/r-runit/package.py @@ -16,6 +16,7 @@ class RRunit(RPackage): license("GPL-2.0-only") + version("0.4.33", sha256="b2a4c5afc7ef9534dac5006f6ef1b2af68630bb73eb74ef70ec7ed53dae6cb5f") version("0.4.32", sha256="23a393059989000734898685d0d5509ece219879713eb09083f7707f167f81f1") depends_on("r@2.5.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-runjags/package.py b/var/spack/repos/builtin/packages/r-runjags/package.py index c9343dbf9f..0bb9196c2a 100644 --- a/var/spack/repos/builtin/packages/r-runjags/package.py +++ b/var/spack/repos/builtin/packages/r-runjags/package.py @@ -24,6 +24,7 @@ class RRunjags(RPackage): license("GPL-2.0-only") + version("2.2.2-4", sha256="6f656e4d0620c0806e596ddb4bfec3934534ec17c02da699fcbfd6720a6f424f") version("2.2.1-7", sha256="e81fdb15e59cdceda125d6ae7cf0cde93361ba80b123d51afd1ecdc993f25016") version("2.2.0-3", sha256="1b1fc0b0cfecf9ecdecc3abcba804cdc114b3c5352d5cc801602deeca90db528") version("2.2.0-2", sha256="e5dfeb83d36faf19ebe64429f6db64aedecf3c9a040fd5bf9c0200914bf5039a") diff --git a/var/spack/repos/builtin/packages/r-rvest/package.py b/var/spack/repos/builtin/packages/r-rvest/package.py index 0e3cb2b544..a1104d8d0f 100644 --- a/var/spack/repos/builtin/packages/r-rvest/package.py +++ b/var/spack/repos/builtin/packages/r-rvest/package.py @@ -16,6 +16,7 @@ class RRvest(RPackage): license("MIT") + version("1.0.4", sha256="7d707c6b2994cf7b6c1d665bec872d2ef5c55f30e7c343c447a8a386a6049ca6") version("1.0.3", sha256="a465ef7391afaa3c26eebe8c61db02314ac04c4d8de5aa53f090716763d21c1e") version("1.0.2", sha256="89bb477e0944c80298a52ccf650db8f6377fd7ed3c1bc7034d000f695fdf05a4") version("0.3.6", sha256="6a2ee3a25d2d738031edbc1b5e2410f2a4538dfbb9705af145f9039504b902fa") @@ -26,15 +27,19 @@ class RRvest(RPackage): depends_on("r@3.0.1:", type=("build", "run")) depends_on("r@3.1:", type=("build", "run"), when="@0.3.3") depends_on("r@3.2:", type=("build", "run"), when="@0.3.4:") + depends_on("r@3.6:", type=("build", "run"), when="@1.0.4:") depends_on("r-cli", type=("build", "run"), when="@1.0.3:") depends_on("r-glue", type=("build", "run"), when="@1.0.3:") depends_on("r-httr@0.5:", type=("build", "run")) depends_on("r-lifecycle@1.0.0:", type=("build", "run"), when="@1:") + depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@1.0.4:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-rlang@0.4.10:", type=("build", "run"), when="@1:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.0.3:") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.0.4:") depends_on("r-selectr", type=("build", "run")) depends_on("r-tibble", type=("build", "run"), when="@1:") depends_on("r-xml2", type=("build", "run")) depends_on("r-xml2@1.3:", type=("build", "run"), when="@1:") - depends_on("r-withr", type=("build", "run"), when="@1.0.3:") + + depends_on("r-withr", type=("build", "run"), when="@1.0.3") diff --git a/var/spack/repos/builtin/packages/r-rzmq/package.py b/var/spack/repos/builtin/packages/r-rzmq/package.py index 4d32899d5d..5fc9d735d7 100644 --- a/var/spack/repos/builtin/packages/r-rzmq/package.py +++ b/var/spack/repos/builtin/packages/r-rzmq/package.py @@ -17,6 +17,7 @@ class RRzmq(RPackage): license("GPL-3.0-only") + version("0.9.13", sha256="8d603543b23a0b78352b4995c90c03d00686fef1d7a25004b66690191fb463f1") version("0.9.8", sha256="815a7eb502b1da3a84246b2dfb6594ca3f241a8675783e6bcdbbf9c952ec1c53") version("0.9.7", sha256="5f47b67b75fd4a230780406f7a55a3708ce8c014cff755a809a6bfa1a6925a45") version("0.9.6", sha256="80a3fc6eb6f7851224c4cd5e219ca4db0286551ad429359d4df853ccb9234316") diff --git a/var/spack/repos/builtin/packages/r-s2/package.py b/var/spack/repos/builtin/packages/r-s2/package.py index bf4d851e08..5555d6062d 100644 --- a/var/spack/repos/builtin/packages/r-s2/package.py +++ b/var/spack/repos/builtin/packages/r-s2/package.py @@ -20,6 +20,7 @@ class RS2(RPackage): license("Apache-2.0") + version("1.1.7", sha256="30762c7150dd72e2f4a3d50e64b8b73b2d59b73275687ba3eea7a6e07f786878") version("1.1.2", sha256="8fb237531c6f4aa5b78fbe36d4fd15bfe852c1308fed58b04b3dae2bb73c0b57") version("1.1.0", sha256="e3aae968538fe80db5b3325474dd9d8ff7f0452b6c606d049a3cac72732ac416") version("1.0.7", sha256="2010c1c6ae29938ec9cd153a8b2c06a333ea4d647932369b2fc7d0c68d6d9e3f") diff --git a/var/spack/repos/builtin/packages/r-sandwich/package.py b/var/spack/repos/builtin/packages/r-sandwich/package.py index 808fae8fb7..a4729a707d 100644 --- a/var/spack/repos/builtin/packages/r-sandwich/package.py +++ b/var/spack/repos/builtin/packages/r-sandwich/package.py @@ -27,6 +27,7 @@ class RSandwich(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("3.1-0", sha256="96b0e105ee50391a1fd286e9556ba6669f08565fa30788b1a21bc861b0a023fa") version("3.0-2", sha256="6e30b6b554eb19430a60c45a8132fb7918ddb0013577bf6a62caeb163bdfe2b4") version("3.0-1", sha256="f6584b7084f3223bbc0c4722f53280496be73849747819b0cb4e8f3910284a89") version("3.0-0", sha256="828fe53b5e09db5015efd529b2db4dcd40251bce110fea7b0b219fa9ac36d529") diff --git a/var/spack/repos/builtin/packages/r-sass/package.py b/var/spack/repos/builtin/packages/r-sass/package.py index 4ac8e74774..e6a3fbd547 100644 --- a/var/spack/repos/builtin/packages/r-sass/package.py +++ b/var/spack/repos/builtin/packages/r-sass/package.py @@ -18,12 +18,14 @@ class RSass(RPackage): license("MIT") + version("0.4.9", sha256="e133049aad7964e0f6150257e1470b3748f36029322265ee797b8caf7517d4d2") version("0.4.5", sha256="eba161d982d2db108c8c0b61ec6b41a20d3adec430c7cc39537ab388c1007a90") version("0.4.2", sha256="b409049d0de9fae853f46c19d353226c8e9244ce847bdada033d8669fc2c9646") version("0.4.1", sha256="850fcb6bd49085d5afd25ac18da0744234385baf1f13d8c0a320f4da2de608bb") version("0.4.0", sha256="7d06ca15239142a49e88bb3be494515abdd8c75f00f3f1b0ee7bccb55019bc2b") depends_on("r-fs", type=("build", "run")) + depends_on("r-fs@1.2.4:", type=("build", "run"), when="@0.4.7:") depends_on("r-rlang@0.4.10:", type=("build", "run")) depends_on("r-htmltools@0.5.1:", type=("build", "run")) depends_on("r-r6", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-satellite/package.py b/var/spack/repos/builtin/packages/r-satellite/package.py index c5bb5a77ba..e3ece86c2a 100644 --- a/var/spack/repos/builtin/packages/r-satellite/package.py +++ b/var/spack/repos/builtin/packages/r-satellite/package.py @@ -25,6 +25,7 @@ class RSatellite(RPackage): license("MIT") + version("1.0.5", sha256="3e4c382f905eb0b2d84f03423af2960854e5cf94905a373c6ba3f41a2b72a1ad") version("1.0.4", sha256="99e79577a70489930c32da46ac26453af53e21c2d3a99f51fbf1f55f2d80dc7c") version("1.0.2", sha256="6447476bd31216e5abe504221e465677954d07419b4174ab4f4e4f7a197969c5") diff --git a/var/spack/repos/builtin/packages/r-scales/package.py b/var/spack/repos/builtin/packages/r-scales/package.py index 38e64733b3..02ca38d3bb 100644 --- a/var/spack/repos/builtin/packages/r-scales/package.py +++ b/var/spack/repos/builtin/packages/r-scales/package.py @@ -28,7 +28,10 @@ class RScales(RPackage): depends_on("r@2.13:", type=("build", "run")) depends_on("r@3.1:", type=("build", "run"), when="@1.0.0:") depends_on("r@3.2:", type=("build", "run"), when="@1.1.1:") + depends_on("r@3.6:", type=("build", "run"), when="@1.3.0:") + depends_on("r-cli", type=("build", "run"), when="@1.3.0:") depends_on("r-farver@2.0.3:", type=("build", "run"), when="@1.1.1:") + depends_on("r-glue", type=("build", "run"), when="@1.3.0:") depends_on("r-labeling", type=("build", "run")) depends_on("r-lifecycle", type=("build", "run"), when="@1.1.1:") depends_on("r-munsell@0.5:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-scattermore/package.py b/var/spack/repos/builtin/packages/r-scattermore/package.py index 84f03f3dcf..10c0964bdd 100644 --- a/var/spack/repos/builtin/packages/r-scattermore/package.py +++ b/var/spack/repos/builtin/packages/r-scattermore/package.py @@ -16,6 +16,7 @@ class RScattermore(RPackage): license("GPL-3.0-or-later") + version("1.2", sha256="5534a87b0bdd1375f0fbffc1a5c980ad64e33a108435a67469b8324b580602d1") version("0.8", sha256="dbdd73d8261cb063464bb29d5c17733b7e87bc50a19948bc80439e19f2a9f8e5") version("0.7", sha256="f36280197b8476314d6ce81a51c4ae737180b180204043d2937bc25bf3a5dfa2") diff --git a/var/spack/repos/builtin/packages/r-scatterpie/package.py b/var/spack/repos/builtin/packages/r-scatterpie/package.py index 6fdd0ba32c..106a5a1ece 100644 --- a/var/spack/repos/builtin/packages/r-scatterpie/package.py +++ b/var/spack/repos/builtin/packages/r-scatterpie/package.py @@ -15,12 +15,14 @@ class RScatterpie(RPackage): license("Artistic-2.0") + version("0.2.3", sha256="704f1072ff934729aefdd659e5c81e62b59f5ae94dc36a1e1f52085dce896447") version("0.1.9", sha256="517fd6cc297aa33f0fbb2643e35ca41dc971166ea2e8ed78460bd4ef7a77a687") version("0.1.8", sha256="a6ccc63a8be63fa113704cf5d4893c1ec1b75d3081ab971bd70e650e708872a0") version("0.1.7", sha256="3f7807519cfe135066ca79c8d8a09b59da9aa6d8aaee5e9aff40cca3d0bebade") version("0.1.5", sha256="e13237b7effc302acafc1c9b520b4904e55875f4a3b804f653eed2940ca08840") depends_on("r@3.4.0:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@0.2.0:") depends_on("r-ggplot2", type=("build", "run")) depends_on("r-ggforce", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-scatterplot3d/package.py b/var/spack/repos/builtin/packages/r-scatterplot3d/package.py index f9f96803ee..a7de5b624c 100644 --- a/var/spack/repos/builtin/packages/r-scatterplot3d/package.py +++ b/var/spack/repos/builtin/packages/r-scatterplot3d/package.py @@ -15,6 +15,7 @@ class RScatterplot3d(RPackage): license("GPL-2.0-only") + version("0.3-44", sha256="1c9c08348c3ed925f59df40cb73accc9e1a169ccfb1e8571f105f40fa98e6ec2") version("0.3-43", sha256="90d7bfb535b76008768306ea9209adfb48e0e07f36eabbb59ab6ddb6522f16a5") version("0.3-42", sha256="a9fedde70e1a846c4dcafbff20f115425206d507896d12c2b21ff052556c5216") version("0.3-41", sha256="4c8326b70a3b2d37126ca806771d71e5e9fe1201cfbe5b0d5a0a83c3d2c75d94") diff --git a/var/spack/repos/builtin/packages/r-sctransform/package.py b/var/spack/repos/builtin/packages/r-sctransform/package.py index 345c4d9a2a..5444c52fc8 100644 --- a/var/spack/repos/builtin/packages/r-sctransform/package.py +++ b/var/spack/repos/builtin/packages/r-sctransform/package.py @@ -20,6 +20,7 @@ class RSctransform(RPackage): license("GPL-3.0-only OR custom") + version("0.4.1", sha256="5f6be7f8be543e4c32c8007207b603a750881459370b7bb5afd63e8c8fabf171") version("0.3.5", sha256="c08e56df05d64ed04ee53eb9e1d4d321da8aff945e36d56db1d5ceb1cd7e6e0b") version("0.3.3", sha256="83af125c40f211e1ddae5098f88766aea1453c02ae98486081f3efadb3620b2b") version("0.3.2", sha256="5dbb0a045e514c19f51bbe11c2dba0b72dca1942d6eb044c36b0538b443475dc") @@ -28,6 +29,7 @@ class RSctransform(RPackage): depends_on("r@3.0.2:", type=("build", "run")) depends_on("r@3.1.0:", type=("build", "run"), when="@0.3.2:") depends_on("r@3.5.0:", type=("build", "run"), when="@0.3.3:") + depends_on("r@3.6.0:", type=("build", "run"), when="@0.4.0:") depends_on("r-dplyr", type=("build", "run"), when="@0.3.3:") depends_on("r-magrittr", type=("build", "run"), when="@0.3.3:") depends_on("r-mass", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-segmented/package.py b/var/spack/repos/builtin/packages/r-segmented/package.py index 71a2c7cf99..b546891122 100644 --- a/var/spack/repos/builtin/packages/r-segmented/package.py +++ b/var/spack/repos/builtin/packages/r-segmented/package.py @@ -22,6 +22,7 @@ class RSegmented(RPackage): license("GPL-2.0-or-later") + version("2.1-1", sha256="6723b0114b1142a7587f712d7a58ce0bebfb53864b84fa1e5d9d7824b17903dd") version("1.6-4", sha256="472c08ae3eb1c4e784aba45f3e745b0e946bef77c26fbb9f103fd35e1a349191") version("1.6-1", sha256="f609ca311c8ca45a7b0776b47d9df06aa175c4f17f8e7e9b33c64902ee00d56f") version("1.6-0", sha256="6baf7f0a4f5d37b945312d28fcbca47cc3c171d097c43a28cf7ffc998a4ce569") @@ -33,5 +34,6 @@ class RSegmented(RPackage): version("0.5-2.2", sha256="3aa7136370dd77911ba8e061b5215560d120bc71f355eeadc0856389dfecb2f1") version("0.5-1.4", sha256="b1dc5f79ccc076c2943b15fe4f339368afa241797b7e80c91b62132cfa66809c") + depends_on("r@3.5.0:", type=("build", "run"), when="@2.0-3:") depends_on("r-mass", type=("build", "run"), when="@1.4-0:") depends_on("r-nlme", type=("build", "run"), when="@1.6-0:") diff --git a/var/spack/repos/builtin/packages/r-seqinr/package.py b/var/spack/repos/builtin/packages/r-seqinr/package.py index dd12e8fa2a..7bf921e774 100644 --- a/var/spack/repos/builtin/packages/r-seqinr/package.py +++ b/var/spack/repos/builtin/packages/r-seqinr/package.py @@ -18,6 +18,7 @@ class RSeqinr(RPackage): license("GPL-2.0-or-later") + version("4.2-36", sha256="931a62a091a7aaaa5efadb1fe85f29e861e2506b75710ba3a6be9b58cb14b225") version("4.2-30", sha256="faf8fe533867eeef57fddfa6592e19d5984954d0670c6c7dbeab6411d55fee4b") version("4.2-16", sha256="c4f3253832fc255197bdce7b4dd381db606c6b787d2e888751b4963acf3a4032") version("4.2-8", sha256="584b34e9dec0320cef02096eb356a0f6115bbd24356cf62e67356963e9d5e9f7") diff --git a/var/spack/repos/builtin/packages/r-servr/package.py b/var/spack/repos/builtin/packages/r-servr/package.py index 9766f0b22b..cf8467a1a0 100644 --- a/var/spack/repos/builtin/packages/r-servr/package.py +++ b/var/spack/repos/builtin/packages/r-servr/package.py @@ -17,6 +17,7 @@ class RServr(RPackage): license("GPL-2.0-or-later") + version("0.30", sha256="43f920161408871a042462b7c3353149a608941253541a19a9ce3408f9882d40") version("0.26", sha256="7588d7e00d5b2f77b0737f164f3d7b0ba7b1e8b60c0372a1d6452096e2d2031c") version("0.25", sha256="e6ae0d4c09e9037268b1c291c36c93ba0a74c31fe2fcb1f0652b2ae9fca5e73c") version("0.24", sha256="d94e1d31802ce6bbab7a5838ff94cbca8cd998237d834ff25fedf7514f41a087") @@ -26,4 +27,5 @@ class RServr(RPackage): depends_on("r-mime@0.2:", type=("build", "run")) depends_on("r-httpuv@1.5.2:", type=("build", "run")) depends_on("r-xfun", type=("build", "run")) + depends_on("r-xfun@0.42:", type=("build", "run"), when="@0.29:") depends_on("r-jsonlite", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-sets/package.py b/var/spack/repos/builtin/packages/r-sets/package.py index 308610786d..77484ffb92 100644 --- a/var/spack/repos/builtin/packages/r-sets/package.py +++ b/var/spack/repos/builtin/packages/r-sets/package.py @@ -19,6 +19,7 @@ class RSets(RPackage): license("GPL-2.0-only") + version("1.0-25", sha256="5ca469218f9679f2372e33e56f781b52947ccbedf730b91a2d3a572993c024f4") version("1.0-24", sha256="e75733f5c9418eb09fb950a4a94ccf84ddd88231c61ee80d02b7f0917debcac9") version("1.0-23", sha256="e5b6bc52060421c572d7f2d99b25909a38eacabd5344a47e1cdb2662c62d690b") version("1.0-22", sha256="6fbf9aa6b0113a58e04f803ab35593feabb0fb55d486d54afb59e027008f9ec6") @@ -53,4 +54,4 @@ class RSets(RPackage): version("0.1", sha256="18dda6c9d526a2f41f2b49a472fb27a7f1bb9ce6ea137b8963e8ad6c378825d0") depends_on("r@2.6:", type=("build", "run"), when="@0.1:") - depends_on("r@2.7:", type=("build", "run"), when="@0.1-2:") + depends_on("r@2.7.0:", type=("build", "run"), when="@0.1-2:") diff --git a/var/spack/repos/builtin/packages/r-seurat/package.py b/var/spack/repos/builtin/packages/r-seurat/package.py index f8483751fc..0af2d89f45 100644 --- a/var/spack/repos/builtin/packages/r-seurat/package.py +++ b/var/spack/repos/builtin/packages/r-seurat/package.py @@ -19,6 +19,7 @@ class RSeurat(RPackage): cran = "Seurat" + version("5.1.0", sha256="adcfb43d7a8cc55eaa7a0954a082ac95e14059a82901913379bfec115e224d59") version("4.3.0", sha256="7ebacb3b86f74279de60b597f9a6e728f0668719811b0dca3425d21762fff97c") version("4.2.1", sha256="410238b6ca147451b43800a6e49c132fa5f6aacfe6b93b39a1e4d61257a9e35e") version("4.2.0", sha256="22a3d22a9ba255c4db5b37339b183fdfb91e2d37a8b8d58a9ff45b1bc414ebef") @@ -37,9 +38,11 @@ class RSeurat(RPackage): depends_on("r@4.0.0:", type=("build", "run"), when="@4.1.0:") depends_on("r-cluster", type=("build", "run"), when="@2.3.0:") depends_on("r-cowplot", type=("build", "run")) + depends_on("r-fastdummies", type=("build", "run"), when="@5.0.0:") depends_on("r-fitdistrplus", type=("build", "run"), when="@2.3.0:") depends_on("r-future", type=("build", "run"), when="@3.0.0:") depends_on("r-future-apply", type=("build", "run"), when="@3.0.0:") + depends_on("r-generics@0.1.3:", type=("build", "run"), when="@5.0.0:") depends_on("r-ggplot2@3.0.0:", type=("build", "run")) depends_on("r-ggplot2@3.3.0:", type=("build", "run"), when="@3.2.3:") depends_on("r-ggrepel", type=("build", "run"), when="@3.0.0:") @@ -51,6 +54,7 @@ class RSeurat(RPackage): depends_on("r-jsonlite", type=("build", "run"), when="@3.2.3:") depends_on("r-kernsmooth", type=("build", "run"), when="@3.0.0:") depends_on("r-leiden@0.3.1:", type=("build", "run"), when="@3.1.0:") + depends_on("r-lifecycle", type=("build", "run"), when="@5.0.0:") depends_on("r-lmtest", type=("build", "run"), when="@2.3.0:") depends_on("r-mass", type=("build", "run")) depends_on("r-matrix@1.2-14:", type=("build", "run")) @@ -63,27 +67,34 @@ class RSeurat(RPackage): depends_on("r-plotly@4.9.0:", type=("build", "run"), when="@3.2.3:") depends_on("r-png", type=("build", "run"), when="@2.3.0:") depends_on("r-progressr", type=("build", "run"), when="@4.3.0:") + depends_on("r-purrr", type=("build", "run"), when="@4.4.0:") depends_on("r-rann", type=("build", "run"), when="@2.3.0:") depends_on("r-rcolorbrewer", type=("build", "run")) depends_on("r-rcpp@0.11.0:", type=("build", "run")) depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@4.1.0:") depends_on("r-rcppannoy", type=("build", "run"), when="@3.1.0:") depends_on("r-rcppannoy@0.0.18:", type=("build", "run"), when="@4.1.0:") + depends_on("r-rcpphnsw", type=("build", "run"), when="@5.0.0:") depends_on("r-reticulate", type=("build", "run"), when="@2.3.1:") depends_on("r-rlang", type=("build", "run"), when="@3.0.0:") depends_on("r-rocr", type=("build", "run")) + depends_on("r-rspectra", type=("build", "run"), when="@5.0.0:") depends_on("r-rtsne", type=("build", "run")) depends_on("r-scales", type=("build", "run"), when="@3.0.0:") depends_on("r-scattermore@0.7:", type=("build", "run"), when="@3.2.3:") + depends_on("r-scattermore@1.2:", type=("build", "run"), when="@4.4.0:") depends_on("r-sctransform@0.2.0:", type=("build", "run"), when="@3.0.0:") depends_on("r-sctransform@0.3.1:", type=("build", "run"), when="@3.2.3:") depends_on("r-sctransform@0.3.3:", type=("build", "run"), when="@4.1.0:") depends_on("r-sctransform@0.3.4:", type=("build", "run"), when="@4.2.0:") depends_on("r-sctransform@0.3.5:", type=("build", "run"), when="@4.2.1:") + depends_on("r-sctransform@0.4.0:", type=("build", "run"), when="@4.4.0:") + depends_on("r-sctransform@0.4.1:", type=("build", "run"), when="@5.0.0:") depends_on("r-seuratobject@4.0.4:", type=("build", "run"), when="@4.1.0:") depends_on("r-seuratobject@4.1.0:", type=("build", "run"), when="@4.1.1:") depends_on("r-seuratobject@4.1.2:", type=("build", "run"), when="@4.2.0:") depends_on("r-seuratobject@4.1.3:", type=("build", "run"), when="@4.2.1:") + depends_on("r-seuratobject@5.0.2:", type=("build", "run"), when="@5.0.0:") depends_on("r-shiny", type=("build", "run"), when="@3.2.3:") depends_on("r-spatstat-explore", type=("build", "run"), when="@4.2.1:") depends_on("r-spatstat-geom", type=("build", "run"), when="@4.1.0:") diff --git a/var/spack/repos/builtin/packages/r-seuratobject/package.py b/var/spack/repos/builtin/packages/r-seuratobject/package.py index 74d32ae36f..8240e6ccaa 100644 --- a/var/spack/repos/builtin/packages/r-seuratobject/package.py +++ b/var/spack/repos/builtin/packages/r-seuratobject/package.py @@ -20,20 +20,26 @@ class RSeuratobject(RPackage): cran = "SeuratObject" + version("5.0.2", sha256="ded30d21f445b7e353fe4a0c4954d45ad19fbe162615d9addf6732f9318ba0cf") version("4.1.3", sha256="585d2754f6165a367f0f458523f0a25d4d4160c929c931b27c5603cc6bd986d3") version("4.1.2", sha256="6a5945f501b573dbe44a15e7d969e63fd5be0c4f8e9d716b71ca29f695236d0d") version("4.1.0", sha256="9ca406cb3bd95c588e1a81c5383e3173a446cc0667142b139ca32685b4b20a05") version("4.0.4", sha256="585261b7d2045193accf817a29e2e3356e731f57c554bed37d232fa49784088c") depends_on("r@4.0.0:", type=("build", "run")) + depends_on("r@4.1.0:", when="@5.0.2:", type=("build", "run")) depends_on("r-future", type=("build", "run"), when="@4.1.0:") depends_on("r-future-apply", type=("build", "run"), when="@4.1.0:") + depends_on("r-generics", when="@5:", type=("build", "run")) + depends_on("r-lifecycle", when="@5:", type=("build", "run")) depends_on("r-matrix@1.3-3:", type=("build", "run")) depends_on("r-matrix@1.5-0:", type=("build", "run"), when="@4.1.2:") + depends_on("r-matrix@1.6-4:", when="@5.0.2:", type=("build", "run")) depends_on("r-progressr", type=("build", "run"), when="@4.1.0:") depends_on("r-rcpp@1.0.5:", type=("build", "run")) depends_on("r-sp", type=("build", "run"), when="@4.1.0:") depends_on("r-sp@1.5-0:", type=("build", "run"), when="@4.1.2:") + depends_on("r-spam", when="@5:", type=("build", "run")) depends_on("r-rlang@0.4.7:", type=("build", "run")) depends_on("r-rcppeigen", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-sf/package.py b/var/spack/repos/builtin/packages/r-sf/package.py index 8a98b2c2d6..d122e494ef 100644 --- a/var/spack/repos/builtin/packages/r-sf/package.py +++ b/var/spack/repos/builtin/packages/r-sf/package.py @@ -19,6 +19,7 @@ class RSf(RPackage): license("GPL-2.0-only OR MIT") + version("1.0-16", sha256="e96e191011cdf2a073c773bdfc50ffd4a5d80f1da0ba1aa05db8015da45a9987") version("1.0-12", sha256="3778ebf58d824b1dfa6297ca8363714d5d85eda04c55ab2bf39597cac1d91287") version("1.0-9", sha256="85c0c71a0a64750281e79aa96e36d13e6285927008b2d37d699e52aba7d8013b") version("1.0-8", sha256="3ddc7090e79d6b5e3fad69e01254677ab5ec86a0b25e7e73493c8eac0ea98732") diff --git a/var/spack/repos/builtin/packages/r-sfheaders/package.py b/var/spack/repos/builtin/packages/r-sfheaders/package.py index 46d0172e3f..12300042f5 100644 --- a/var/spack/repos/builtin/packages/r-sfheaders/package.py +++ b/var/spack/repos/builtin/packages/r-sfheaders/package.py @@ -17,11 +17,13 @@ class RSfheaders(RPackage): license("MIT") + version("0.4.4", sha256="f65ffe67b1d07beb6904b8960c66be684f5526b4d6450ab46c630c77e9b9bd07") version("0.4.2", sha256="ed9fb934c537fb6f126886f8e5997727de856e32fc3d38911b61a3a83faa7b2c") version("0.4.0", sha256="86bcd61018a0491fc8a1e7fb0422c918296287b82be299a79ccee8fcb515e045") depends_on("r-geometries@0.2.0:", type=("build", "run")) depends_on("r-geometries@0.2.2:", type=("build", "run"), when="@0.4.2:") + depends_on("r-geometries@0.2.4:", type=("build", "run"), when="@0.4.4:") depends_on("r-rcpp", type=("build", "run")) depends_on("r-rcpp@1.0.10:", type=("build", "run"), when="@0.4.2:") depends_on("r@3.0.2:", type=("build", "run"), when="@0.4.2:") diff --git a/var/spack/repos/builtin/packages/r-sfsmisc/package.py b/var/spack/repos/builtin/packages/r-sfsmisc/package.py index e024fa2f8b..6c128a2ad1 100644 --- a/var/spack/repos/builtin/packages/r-sfsmisc/package.py +++ b/var/spack/repos/builtin/packages/r-sfsmisc/package.py @@ -23,6 +23,7 @@ class RSfsmisc(RPackage): license("GPL-2.0-or-later") + version("1.1-19", sha256="869931dd35d2e18cf2f960b86da2638b7a03c92288c6d7a736a10fa5585cf23b") version("1.1-15", sha256="4afa42cf83a287f62cac21741fc0559dee9dbd69dee59a740defce9a0e7c81e6") version("1.1-13", sha256="a81710357de2dcdaf00d9fa30a29cde0dd83616edc358452fd6105ea88f34218") version("1.1-12", sha256="9b12184a28fff87cacd0c3602d0cf63acb4d0f3049ad3a6ff16177f6df350782") diff --git a/var/spack/repos/builtin/packages/r-shadowtext/package.py b/var/spack/repos/builtin/packages/r-shadowtext/package.py index f7f9eefa0a..7d5a0ba997 100644 --- a/var/spack/repos/builtin/packages/r-shadowtext/package.py +++ b/var/spack/repos/builtin/packages/r-shadowtext/package.py @@ -16,6 +16,7 @@ class RShadowtext(RPackage): license("Artistic-2.0") + version("0.1.4", sha256="87d0bea90e0090dd40f7cd8c380d185a9d4112a32a729d31859eaeca0cd46ee8") version("0.1.2", sha256="253c4e737dbb302aa0729e5074e84cbfde2a73bfd7a0fd2c74b557cb728bae7d") version("0.1.1", sha256="eb06581d7ed06c963eee47548932688fd48eba70b3ebd2a7b41a6501d6e00006") version("0.0.7", sha256="6e32b1dfd3d4816803848b876666185258b888286ec3d3e8500499ec3eba31e8") diff --git a/var/spack/repos/builtin/packages/r-shape/package.py b/var/spack/repos/builtin/packages/r-shape/package.py index 338cebd960..cb9f17c6b9 100644 --- a/var/spack/repos/builtin/packages/r-shape/package.py +++ b/var/spack/repos/builtin/packages/r-shape/package.py @@ -16,10 +16,11 @@ class RShape(RPackage): license("GPL-3.0-or-later") + version("1.4.6.1", sha256="43f9bd0f997fd6cf1838efd8b2509c9a6396513f4e54a20360481634affd22a4") version("1.4.6", sha256="b9103e5ed05c223c8147dbe3b87a0d73184697343634a353a2ae722f7ace0b7b") version("1.4.5", sha256="094a79b8f42226189227fd7af71868e42106caa25a4d7f80a26977e8bc84189f") version("1.4.4", sha256="f4cb1b7d7c84cf08d2fa97f712ea7eb53ed5fa16e5c7293b820bceabea984d41") version("1.4.3", sha256="720f6ca9c70a39a3900af9d074bff864b18ac58013b21d48b779047481b93ded") version("1.4.2", sha256="c6c08ba9cc2e90e5c9d3d5223529b57061a041f637886ad7665b9fa27465637a") - depends_on("r@2.0.1:", type=("build", "run")) + depends_on("r@2.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-shiny/package.py b/var/spack/repos/builtin/packages/r-shiny/package.py index 91acdf5b46..1cc0eb3e3d 100644 --- a/var/spack/repos/builtin/packages/r-shiny/package.py +++ b/var/spack/repos/builtin/packages/r-shiny/package.py @@ -18,6 +18,7 @@ class RShiny(RPackage): license("GPL-3.0-only OR custom") + version("1.9.1", sha256="854b6a214f127d652de2e0e02d675fd53209b058c11911f56f8d41382ba654e3") version("1.8.1.1", sha256="a38d5fb5d750e2c2091ce9101f138c1f9bc7009bbb195227a3519c5d97e36753") version("1.7.4", sha256="bbfcdd7375013b8f59248b3f3f4e752acd445feb25179f3f7f65cd69614da4b5") version("1.7.3", sha256="b8ca9a39fa69ea9b270a7e9037198d95122c79bd493b865d909d343dd3523ada") @@ -57,7 +58,9 @@ class RShiny(RPackage): depends_on("r-commonmark@1.7:", type=("build", "run"), when="@1.5.0:") depends_on("r-glue@1.3.2:", type=("build", "run"), when="@1.5.0:") depends_on("r-bslib@0.3.0:", type=("build", "run"), when="@1.7.1:") + depends_on("r-bslib@0.6.0:", type=("build", "run"), when="@1.9.0:") depends_on("r-cachem", type=("build", "run"), when="@1.7.1:") + depends_on("r-cachem@1.1.0:", type=("build", "run"), when="@1.9.0:") depends_on("r-lifecycle@0.2.0:", type=("build", "run"), when="@1.7.1:") depends_on("r-digest", type=("build", "run"), when="@:1.5.0") diff --git a/var/spack/repos/builtin/packages/r-signac/package.py b/var/spack/repos/builtin/packages/r-signac/package.py index 0188ca9334..26001125b6 100644 --- a/var/spack/repos/builtin/packages/r-signac/package.py +++ b/var/spack/repos/builtin/packages/r-signac/package.py @@ -18,11 +18,13 @@ class RSignac(RPackage): cran = "Signac" + version("1.14.0", sha256="e0aad9e2c27c148fdd376081c2de1e3db46b1835eac83ef41fe562e08363c59e") version("1.9.0", sha256="b8ff36427e5919fd420daa1f50cf8c71935293ee7f88560041acb993b5e3afa8") version("1.8.0", sha256="9c4b123f4d077111c7e6dd1659483ada984300c8e923672ca924e46fb6a1dd06") version("1.7.0", sha256="5e4456eeab29fa2df7f6236b050dec8cb9c073d7652a89ee5030a27f94e5e4bf") depends_on("r@4.0.0:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@1.14.0:") depends_on("r-genomeinfodb@1.29.3:", type=("build", "run")) depends_on("r-genomicranges", type=("build", "run")) depends_on("r-iranges", type=("build", "run")) @@ -30,11 +32,13 @@ class RSignac(RPackage): depends_on("r-rsamtools", type=("build", "run")) depends_on("r-s4vectors", type=("build", "run")) depends_on("r-seuratobject@4.0.0:", type=("build", "run")) + depends_on("r-seuratobject@5.0.2:", type=("build", "run"), when="@1.14.0:") depends_on("r-data-table", type=("build", "run")) depends_on("r-dplyr@1.0.0:", type=("build", "run")) depends_on("r-future", type=("build", "run")) depends_on("r-future-apply", type=("build", "run")) depends_on("r-ggplot2", type=("build", "run")) + depends_on("r-rlang", type=("build", "run"), when="@1.10.0:") depends_on("r-irlba", type=("build", "run")) depends_on("r-pbapply", type=("build", "run")) depends_on("r-tidyr", type=("build", "run")) @@ -47,4 +51,5 @@ class RSignac(RPackage): depends_on("r-rcpp", type=("build", "run")) depends_on("r-tidyselect", type=("build", "run")) depends_on("r-vctrs", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@1.12.0:") depends_on("zlib-api") diff --git a/var/spack/repos/builtin/packages/r-sm/package.py b/var/spack/repos/builtin/packages/r-sm/package.py index 60879f612c..c52d11a2db 100644 --- a/var/spack/repos/builtin/packages/r-sm/package.py +++ b/var/spack/repos/builtin/packages/r-sm/package.py @@ -17,6 +17,7 @@ class RSm(RPackage): license("GPL-2.0-or-later") + version("2.2-6.0", sha256="27a6e3291a572c3d30f25982902ccde5299230061e5dc1a38fb52aaac2561d61") version("2.2-5.7.1", sha256="ea0cc32eb14f6c18beba0bede66ed37bc5341bd3f76c1a7ae56d7254693e1457") version("2.2-5.7", sha256="2607a2cafc68d7e99005daf99e36f4a66eaf569ebb6b7500e962642cf58be80f") version("2.2-5.6", sha256="b890cd7ebe8ed711ab4a3792c204c4ecbe9e6ca1fd5bbc3925eba5833a839c30") diff --git a/var/spack/repos/builtin/packages/r-snakecase/package.py b/var/spack/repos/builtin/packages/r-snakecase/package.py index fc895fbf5b..4d06c77185 100644 --- a/var/spack/repos/builtin/packages/r-snakecase/package.py +++ b/var/spack/repos/builtin/packages/r-snakecase/package.py @@ -16,6 +16,7 @@ class RSnakecase(RPackage): license("GPL-3.0-only") + version("0.11.1", sha256="2a5f9791337ca42e392f23fb873eb44f74810583e9aa7c62fda2f28f9e750821") version("0.11.0", sha256="998420a58391ac85785e60bcdf6fd6927c82758ad2859a9a73a0e57299e8c1cf") depends_on("r@3.2:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-snowfall/package.py b/var/spack/repos/builtin/packages/r-snowfall/package.py index 0f5473d70d..fb3b1b77c6 100644 --- a/var/spack/repos/builtin/packages/r-snowfall/package.py +++ b/var/spack/repos/builtin/packages/r-snowfall/package.py @@ -19,6 +19,7 @@ class RSnowfall(RPackage): license("GPL-2.0-or-later") + version("1.84-6.3", sha256="2641932b01041e34b7afb1261f649755b4c8d6560080e0e2ee549ffdf3b8b143") version("1.84-6.2", sha256="9b467ab2b992455c6e1aeabe375c5694761fa1cf8aaf4f003ca47102b656353b") version("1.84-6.1", sha256="5c446df3a931e522a8b138cf1fb7ca5815cc82fcf486dbac964dcbc0690e248d") diff --git a/var/spack/repos/builtin/packages/r-sp/package.py b/var/spack/repos/builtin/packages/r-sp/package.py index b0c228fd6d..54483d6c2a 100644 --- a/var/spack/repos/builtin/packages/r-sp/package.py +++ b/var/spack/repos/builtin/packages/r-sp/package.py @@ -18,6 +18,7 @@ class RSp(RPackage): license("GPL-2.0-or-later") + version("2.1-4", sha256="e185e7fb61d2d7dbc50fd765a93e170fa778083a653588db1f5e99d019479f0a") version("1.6-0", sha256="f5977fbe80e7dee8e95d41fe0ef9d87c2c984422bb529ea5211fd38a13f9fcda") version("1.5-1", sha256="69b9eab481d389bbb736d2adcf50c180aca248c3ffc4ebda8ffe2accc5f229df") version("1.5-0", sha256="939a06adf78ec8de7a663d6ca5bba426780852b357773446b00cc298200ff81c") @@ -29,4 +30,6 @@ class RSp(RPackage): version("1.2-3", sha256="58b3a9e395ca664ee61b20b480be4eb61576daca44c3d3f6f9a943bb0155879a") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.2.0:", type=("build", "run"), when="@2.0-0:") + depends_on("r@3.5.0:", type=("build", "run"), when="@2.1-0:") depends_on("r-lattice", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spacetime/package.py b/var/spack/repos/builtin/packages/r-spacetime/package.py index e3c0310fcb..65dc462403 100644 --- a/var/spack/repos/builtin/packages/r-spacetime/package.py +++ b/var/spack/repos/builtin/packages/r-spacetime/package.py @@ -20,6 +20,7 @@ class RSpacetime(RPackage): license("GPL-2.0-or-later") + version("1.3-1", sha256="1942a51949e82d19a652fc09e61d738f8eca6ed992783cc1d0164313d71521cf") version("1.3-0", sha256="2e9902a5c6f355f0b8e23237cf3b1553f22d7d79493bdbdb99e49104b9ef541b") version("1.2-8", sha256="4297a027ab4cff32e41cec65aa7d92af66c7a885fd2322b010b0af9a14f24c59") version("1.2-6", sha256="8fd46606ed9589ffce19368d40004890f96e8fe77f13b546e6a2f8b9ced0dd81") diff --git a/var/spack/repos/builtin/packages/r-spades-core/package.py b/var/spack/repos/builtin/packages/r-spades-core/package.py index 4aacc1dd26..d6b2158fa3 100644 --- a/var/spack/repos/builtin/packages/r-spades-core/package.py +++ b/var/spack/repos/builtin/packages/r-spades-core/package.py @@ -23,6 +23,7 @@ class RSpadesCore(RPackage): maintainers("dorton21") + version("2.1.0", sha256="aee1a3093dfe04210719a7ced12d522299845bbd794f7eb78308f3a5b613762b") version("1.1.0", sha256="67af4f3f153b75a0865fde2457c5d951c2f2184d07c557879b7a8c43a6e7ad66") version("1.0.10", sha256="05e20f7d9aeef9ba68e50e993ef3027b8c85afc5e3f83f5ecaee9d1a7873e379") version("1.0.9", sha256="1176a41a1af334388c1b16ff4ed9a6f30007bb5ed1fa14d798c59461042537dd") @@ -30,17 +31,26 @@ class RSpadesCore(RPackage): depends_on("r@3.6:", type=("build", "run")) depends_on("r@4.0:", type=("build", "run"), when="@1.0.10:") + depends_on("r@4.1:", type=("build", "run"), when="@2.0.2:") + depends_on("r@4.2:", type=("build", "run"), when="@2.0.4:") depends_on("r-quickplot@0.1.4:", type=("build", "run")) depends_on("r-reproducible@1.2.1.9007:", type=("build", "run")) depends_on("r-reproducible@1.2.7:", type=("build", "run"), when="@1.0.9:") depends_on("r-reproducible@1.2.9:", type=("build", "run"), when="@1.1.0:") - depends_on("r-crayon", type=("build", "run")) + depends_on("r-reproducible@2.1.0:", type=("build", "run"), when="@2.1.0:") + depends_on("r-cli", type=("build", "run"), when="@2.1.0:") depends_on("r-data-table@1.10.4:", type=("build", "run")) depends_on("r-data-table@1.11.0:", type=("build", "run"), when="@1.0.9:") - depends_on("r-fastdigest", type=("build", "run")) + depends_on("r-fs", type=("build", "run"), when="@2.0.3:") depends_on("r-igraph@1.0.1:", type=("build", "run")) depends_on("r-lobstr", type=("build", "run"), when="@1.1.0:") + depends_on("r-quickplot@1.0.2:", type=("build", "run"), when="@2.1.0:") depends_on("r-qs@0.21.1:", type=("build", "run")) - depends_on("r-raster@2.5-8:", type=("build", "run")) depends_on("r-require@0.0.7:", type=("build", "run")) + depends_on("r-require@0.3.1:", type=("build", "run"), when="@2.0.2:") + depends_on("r-terra@1.7-46:", type=("build", "run"), when="@2.0.3:") depends_on("r-whisker", type=("build", "run")) + + depends_on("r-crayon", type=("build", "run"), when="@:2.0.5") + depends_on("r-fastdigest", type=("build", "run"), when="@:1.1.0") + depends_on("r-raster@2.5-8:", type=("build", "run"), when="@:1.1.0") diff --git a/var/spack/repos/builtin/packages/r-spades-tools/package.py b/var/spack/repos/builtin/packages/r-spades-tools/package.py index 809ad5f86d..a5427ce5a6 100644 --- a/var/spack/repos/builtin/packages/r-spades-tools/package.py +++ b/var/spack/repos/builtin/packages/r-spades-tools/package.py @@ -19,6 +19,7 @@ class RSpadesTools(RPackage): maintainers("dorton21") + version("2.0.7", sha256="f1c62cc76ff75119ae54e35be81d5819a282c547f77292e4f392599465e7b2cf") version("1.0.1", sha256="6b0d69c8737ff06e2cf312ff94b298b81f4c50af2efd498a124b99ed66a2be9a") version("1.0.0", sha256="1172b96ada7052fcaa3a113ed31eeb1b67dba70f40fa74cbb378c6e75e9235dc") version("0.3.10", sha256="ba4c075b534caaca413e2e97711b5475c2679d9546c8fee4a07fb2bb94d52c94") @@ -28,19 +29,24 @@ class RSpadesTools(RPackage): depends_on("r@3.5.0:", type=("build", "run")) depends_on("r@3.6:", type=("build", "run"), when="@0.3.9:") depends_on("r@4.0:", type=("build", "run"), when="@0.3.10:") + depends_on("r@4.2:", type=("build", "run"), when="@2.0.6:") depends_on("r-backports", type=("build", "run")) depends_on("r-checkmate@1.8.2:", type=("build", "run")) - depends_on("r-circstats@0.2-4:", type=("build", "run")) depends_on("r-data-table@1.10.4:", type=("build", "run")) - depends_on("r-fastmatch@1.1-0:", type=("build", "run")) depends_on("r-fpcompare@0.2.1:", type=("build", "run")) - depends_on("r-magrittr", type=("build", "run")) - depends_on("r-quickplot", type=("build", "run")) - depends_on("r-raster@2.5-8:", type=("build", "run")) depends_on("r-rcpp@0.12.12:", type=("build", "run")) - depends_on("r-require", type=("build", "run"), when="@0.3.10:") - depends_on("r-rgeos", type=("build", "run")) - depends_on("r-sp@1.2-4:", type=("build", "run")) - + depends_on("r-reproducible@2.0.2:", type=("build", "run"), when="@2.0.0:") + depends_on("r-reproducible@2.0.5:", type=("build", "run"), when="@2.0.1:") + depends_on("r-reproducible@2.0.9:", type=("build", "run"), when="@2.0.5:") + depends_on("r-terra", type=("build", "run"), when="@2.0.0:") + + depends_on("r-circstats@0.2-4:", type=("build", "run"), when="@:1.0.1") + depends_on("r-fastmatch@1.1-0:", type=("build", "run"), when="@:1.0.1") + depends_on("r-magrittr", type=("build", "run"), when="@:1.0.1") + depends_on("r-quickplot", type=("build", "run"), when="@:1.0.1") + depends_on("r-raster@2.5-8:", type=("build", "run"), when="@:1.0.1") depends_on("r-reproducible@0.2.0:", type=("build", "run"), when="@:0.3.6") depends_on("r-reproducible@1.2.7:", type=("build", "run"), when="@0.3.9") + depends_on("r-require", type=("build", "run"), when="@0.3.10:1.0.1") + depends_on("r-rgeos", type=("build", "run"), when="@:1.0.1") + depends_on("r-sp@1.2-4:", type=("build", "run"), when="@:1.0.1") diff --git a/var/spack/repos/builtin/packages/r-spades/package.py b/var/spack/repos/builtin/packages/r-spades/package.py index f7db62f71d..dd2f112cb0 100644 --- a/var/spack/repos/builtin/packages/r-spades/package.py +++ b/var/spack/repos/builtin/packages/r-spades/package.py @@ -26,6 +26,7 @@ class RSpades(RPackage): maintainers("dorton21") + version("2.0.11", sha256="a88e202d1fe6fa700dfc176018a07cc5dd9ac9a8d0695eb6bc507ace52b68a32") version("2.0.9", sha256="f68080318bc922c6d8c495e6d963acdbb24dc90a3e8013e3e2f894b40a584c85") version("2.0.8", sha256="2230704f700d07bda25a23ab5c6630a093c9ed2fe3c47ab6294eebaf1d86f03f") version("2.0.7", sha256="5b62e9d701aa178be57f22369a5d043c9793a1bd3dcd4acac18c5a6b906ed8a0") @@ -33,10 +34,15 @@ class RSpades(RPackage): depends_on("r@3.6:", type=("build", "run")) depends_on("r@4.0:", type=("build", "run"), when="@2.0.8:") + depends_on("r@4.2:", type=("build", "run"), when="@2.0.10:") depends_on("r-quickplot", type=("build", "run")) + depends_on("r-quickplot@1.0.2:", type=("build", "run"), when="@2.0.10:") depends_on("r-reproducible@1.2.1.9007:", type=("build", "run")) depends_on("r-reproducible@1.2.2:", type=("build", "run"), when="@2.0.9:") + depends_on("r-reproducible@2.0.10:", type=("build", "run"), when="@2.0.10:") depends_on("r-spades-core@1.0.4:", type=("build", "run")) + depends_on("r-spades-core@2.0.3:", type=("build", "run"), when="@2.0.10:") depends_on("r-spades-tools", type=("build", "run")) + depends_on("r-spades-tools@2.0.5:", type=("build", "run"), when="@2.0.10:") depends_on("r-spades-addins", type=("build", "run"), when="@:2.0.6") diff --git a/var/spack/repos/builtin/packages/r-spam/package.py b/var/spack/repos/builtin/packages/r-spam/package.py index 845a6147f3..6612bb66bb 100644 --- a/var/spack/repos/builtin/packages/r-spam/package.py +++ b/var/spack/repos/builtin/packages/r-spam/package.py @@ -21,6 +21,7 @@ class RSpam(RPackage): license("LGPL-2.0-only OR BSD-3-Clause") + version("2.10-0", sha256="719c86a23801ecf051ffd8291912ee3567af4010e74af470fbf09e274728ac79") version("2.9-1", sha256="c32e219279988b1bfc258aaf64f5a46efa558202848a9ae64946ffbe8b497ddb") version("2.8-0", sha256="d98177435b028d1c706d0197ea8132bfaffae6052c3ce6064a7f64178512d6aa") version("2.6-0", sha256="638fdd658e94f7544b46f6b6568b20a9f390bcd703aff572a3a5249fef66be5c") @@ -29,3 +30,4 @@ class RSpam(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.5:", type=("build", "run"), when="@2.9-1:") depends_on("r-dotcall64", type=("build", "run")) + depends_on("r-rcpp@1.0.8.3:", type=("build", "run"), when="@2.10-0:") diff --git a/var/spack/repos/builtin/packages/r-sparsem/package.py b/var/spack/repos/builtin/packages/r-sparsem/package.py index 0c9254fad8..17b270cc03 100644 --- a/var/spack/repos/builtin/packages/r-sparsem/package.py +++ b/var/spack/repos/builtin/packages/r-sparsem/package.py @@ -15,6 +15,7 @@ class RSparsem(RPackage): cran = "SparseM" + version("1.84-2", sha256="2580fdbb8679e76c92b9f0c5bd9bb503c4cb6a750ef6ae96595441690ce98665") version("1.81", sha256="bd838f381ace680fa38508ff70b3d83cb9ffa28ac1ab568509249bca53c34b33") version("1.78", sha256="d6b79ec881a10c91cb03dc23e6e783080ded9db4f2cb723755aa0d7d29a8b432") version("1.77", sha256="a9329fef14ae4fc646df1f4f6e57efb0211811599d015f7bc04c04285495d45c") diff --git a/var/spack/repos/builtin/packages/r-spatial/package.py b/var/spack/repos/builtin/packages/r-spatial/package.py index 401e685f9c..5a2c17f335 100644 --- a/var/spack/repos/builtin/packages/r-spatial/package.py +++ b/var/spack/repos/builtin/packages/r-spatial/package.py @@ -15,6 +15,7 @@ class RSpatial(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("7.3-17", sha256="f1003ed8cff2a47169a4787c8be46e8c2c501cc06c8b1e5f97bf62507e5f5dd7") version("7.3-16", sha256="e46565a64c5ec148a77789867e5103746462a41de294539b230bad2a0e16e406") version("7.3-15", sha256="e5613be94d6f5c1f54813dadc96e4a86b3417dea28106cc90cb24dfd6c3c8cef") version("7.3-12", sha256="7639039ee7407bd088e1b253376b2cb4fcdf4cc9124d6b48e4119d5cda872d63") diff --git a/var/spack/repos/builtin/packages/r-spatialeco/package.py b/var/spack/repos/builtin/packages/r-spatialeco/package.py index 40b51335c8..f71a8a2624 100644 --- a/var/spack/repos/builtin/packages/r-spatialeco/package.py +++ b/var/spack/repos/builtin/packages/r-spatialeco/package.py @@ -19,6 +19,7 @@ class RSpatialeco(RPackage): cran = "spatialEco" + version("2.0-2", sha256="533b8e938df196609a6c85270c0bdc279287c5ee222de9e05ac745713a3ab57c") version("2.0-0", sha256="9a2384e875ec465d1a2ccd392acc90d4469eb62babd32bb90e30b27a921153f6") version("1.3-7", sha256="38688466d9a2a56675e2fe45cf69833a163133ad3afb6f95e9ac2e8eab221b7a") version("1.3-5", sha256="d4fb211124edf828333841c44a5af01165c53d89af460144214d81e3c13983c7") @@ -28,24 +29,25 @@ class RSpatialeco(RPackage): depends_on("r@3.6:", type=("build", "run")) depends_on("r@4.0:", type=("build", "run"), when="@1.3-7:") + depends_on("r@4.2:", type=("build", "run"), when="@2.0-2:") depends_on("r-sf", type=("build", "run")) - depends_on("r-spatstat-explore", type=("build", "run"), when="@2.0-0:") depends_on("r-terra", type=("build", "run"), when="@2.0-0:") - depends_on("r-spatstat-geom", type=("build", "run"), when="@1.3-7:") - depends_on("r-spatstat-geom@3.0-3:", type=("build", "run"), when="@2.0-0:") - depends_on("r-spdep", type=("build", "run")) - depends_on("r-spatialpack@0.3:", type=("build", "run")) - depends_on("r-envstats", type=("build", "run")) - depends_on("r-mgcv", type=("build", "run")) - depends_on("r-yaimpute", type=("build", "run")) - depends_on("r-rms", type=("build", "run")) - depends_on("r-rann", type=("build", "run")) - depends_on("r-rcurl", type=("build", "run")) - depends_on("r-readr", type=("build", "run")) - depends_on("r-cluster", type=("build", "run")) - depends_on("r-ks", type=("build", "run"), when="@2.0-0:") - depends_on("r-mass", type=("build", "run")) + depends_on("r-spatstat-explore", type=("build", "run"), when="@2.0-0") + depends_on("r-spatstat-geom", type=("build", "run"), when="@1.3-7:2.0-0") + depends_on("r-spatstat-geom@3.0-3:", type=("build", "run"), when="@2.0-0") + depends_on("r-spdep", type=("build", "run"), when="@:2.0-0") + depends_on("r-spatialpack@0.3:", type=("build", "run"), when="@:2.0-0") + depends_on("r-envstats", type=("build", "run"), when="@:2.0-0") + depends_on("r-mgcv", type=("build", "run"), when="@:2.0-0") + depends_on("r-yaimpute", type=("build", "run"), when="@:2.0-0") + depends_on("r-rms", type=("build", "run"), when="@:2.0-0") + depends_on("r-rann", type=("build", "run"), when="@:2.0-0") + depends_on("r-rcurl", type=("build", "run"), when="@:2.0-0") + depends_on("r-readr", type=("build", "run"), when="@:2.0-0") + depends_on("r-cluster", type=("build", "run"), when="@:2.0-0") + depends_on("r-ks", type=("build", "run"), when="@2.0-0") + depends_on("r-mass", type=("build", "run"), when="@:2.0-0") depends_on("r-dplyr", type=("build", "run"), when="@:1.3-2") depends_on("r-exactextractr", type=("build", "run"), when="@:1.3-2") depends_on("r-maptools", type=("build", "run"), when="@:1.3-2") diff --git a/var/spack/repos/builtin/packages/r-spatialreg/package.py b/var/spack/repos/builtin/packages/r-spatialreg/package.py index 7f187dbf57..89f37bc51c 100644 --- a/var/spack/repos/builtin/packages/r-spatialreg/package.py +++ b/var/spack/repos/builtin/packages/r-spatialreg/package.py @@ -35,6 +35,7 @@ class RSpatialreg(RPackage): license("GPL-2.0-only") + version("1.3-5", sha256="eefeaa2f22d3652a23c30c8ff81364f419634e466cdb0c2d9c7bcef9287b00c4") version("1.2-8", sha256="150cb77ca09800d93af7de37440072d59ac7e41acb45ab42fc1c0e59edd7f9de") version("1.2-6", sha256="9b384117a31ab5fe830325b3eacbec5eb9d40bf0e9ca3c75ea15ca6b78fbd41d") version("1.2-3", sha256="09e0e65f043975d5c1d4be99ef9f29cf0790e962dcde9b7e45a7027d268fce22") @@ -44,12 +45,15 @@ class RSpatialreg(RPackage): depends_on("r@3.3.0:", type=("build", "run")) depends_on("r-spdata", type=("build", "run")) + depends_on("r-spdata@2.3.1:", type=("build", "run"), when="@1.3-4:") depends_on("r-matrix", type=("build", "run")) depends_on("r-sf", type=("build", "run"), when="@1.2-1:") depends_on("r-spdep", type=("build", "run")) - depends_on("r-expm", type=("build", "run")) + depends_on("r-spdep@1.3-1:", type=("build", "run"), when="@1.3-1:") + depends_on("r-expm", type=("build", "run"), when="@:1.2-10") depends_on("r-coda", type=("build", "run")) depends_on("r-mass", type=("build", "run")) + depends_on("r-multcomp", type=("build", "run"), when="@1.2-9:") depends_on("r-boot", type=("build", "run")) depends_on("r-learnbayes", type=("build", "run")) depends_on("r-nlme", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spatstat-data/package.py b/var/spack/repos/builtin/packages/r-spatstat-data/package.py index bcb503e91d..f043688b31 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-data/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-data/package.py @@ -13,6 +13,7 @@ class RSpatstatData(RPackage): cran = "spatstat.data" + version("3.1-2", sha256="9b9b416303b8040f723400f3dc454cda75cff1d958660767e7b824503b490b77") version("3.0-1", sha256="8eeb4b1de356e9cef42f58b5e0fc7ced2a476a1306e09395ba97253b22dd5300") version("3.0-0", sha256="cff9058a88489020a4a05b9576cd452f37fa9b42084873c474d06931f5187057") version("2.2-0", sha256="d3943bb4f6509d60bf68e79ce4533c5ec5261f411da6b0ef5238c124fc37c3e5") @@ -27,4 +28,5 @@ class RSpatstatData(RPackage): depends_on("r-spatstat-utils@2.1-0:", type=("build", "run"), when="@2.1-2:") depends_on("r-spatstat-utils@3.0-0:", type=("build", "run"), when="@3.0-0:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.0-1:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.1-2:") depends_on("r-matrix", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spatstat-explore/package.py b/var/spack/repos/builtin/packages/r-spatstat-explore/package.py index 373c33f425..292ba6b28e 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-explore/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-explore/package.py @@ -25,19 +25,28 @@ class RSpatstatExplore(RPackage): cran = "spatstat.explore" + version("3.3-2", sha256="a24827d24a86f2f20f8dcbbb5f57f5ab43345fa346c572099b84d867e7bf85ed") version("3.1-0", sha256="87ef4882652db3b834214bfc776dd7d23d931a9227de12f19722aeb1029d086e") version("3.0-3", sha256="137444a46d26d88241336feece63ed7b006a9328cfe3861d4b8ab7b4bed963a7") depends_on("r@3.5.0:", type=("build", "run")) depends_on("r-spatstat-data@3.0:", type=("build", "run")) + depends_on("r-spatstat-data@3.0-4:", type=("build", "run"), when="@:") + depends_on("r-spatstat-data@3.1-2:", type=("build", "run"), when="@3.3-2:") depends_on("r-spatstat-geom@3.0:", type=("build", "run")) depends_on("r-spatstat-geom@3.0-5:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-geom@3.2-9:", type=("build", "run"), when="@:") + depends_on("r-spatstat-geom@3.3-2:", type=("build", "run"), when="@3.3-2:") depends_on("r-spatstat-random@3.0:", type=("build", "run")) depends_on("r-spatstat-random@3.1:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-random@3.3-1:", type=("build", "run"), when="@3.3-2:") depends_on("r-nlme", type=("build", "run")) + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-spatstat-utils@3.0:", type=("build", "run")) depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-utils@3.1-0:", type=("build", "run"), when="@3.3-2:") depends_on("r-spatstat-sparse@3.0:", type=("build", "run")) + depends_on("r-spatstat-sparse@3.1-0:", type=("build", "run"), when="@3.3-2:") depends_on("r-goftest@1.2-2:", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) depends_on("r-abind", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spatstat-geom/package.py b/var/spack/repos/builtin/packages/r-spatstat-geom/package.py index 8070c59daf..94f62c9259 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-geom/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-geom/package.py @@ -26,6 +26,7 @@ class RSpatstatGeom(RPackage): cran = "spatstat.geom" + version("3.3-2", sha256="cbc08a6924edbf0f1ea104136d5b2200caeecbd6c2cb4d55d4f56af9beea570f") version("3.1-0", sha256="184a96679babcbff4897c5a471e034eb1bb7127c6cf668e8cc2c2c74bdea47fe") version("3.0-3", sha256="6e5b56c60e774a0cdcaa5a8ffde071225f233832446a341588bd8a7840913c84") version("2.4-0", sha256="32b89a409ce87ffe901e4c8720a26cac9629f9816e163c4ad68b7aa012d69e67") @@ -34,8 +35,11 @@ class RSpatstatGeom(RPackage): depends_on("r@3.5.0:", type=("build", "run")) depends_on("r-spatstat-data@2.0-0:", type=("build", "run")) depends_on("r-spatstat-data@3.0:", type=("build", "run"), when="@3.0-3:") + depends_on("r-spatstat-data@3.1:", type=("build", "run"), when="@3.3-2:") + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.3-2:") depends_on("r-spatstat-utils@2.2-0:", type=("build", "run")) depends_on("r-spatstat-utils@3.0:", type=("build", "run"), when="@3.0-3:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.3-2:") depends_on("r-deldir@1.0-2:", type=("build", "run")) depends_on("r-polyclip@1.10-0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py b/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py index cae0f1106f..995ad70fd0 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-linnet/package.py @@ -39,22 +39,31 @@ class RSpatstatLinnet(RPackage): cran = "spatstat.linnet" + version("3.2-1", sha256="1af0d8063c72650f17c6b79afb07e69e0b6a9794583e8f0c38c6624d91dc11bf") version("3.1-0", sha256="b9b0ad66af169ca1ef3da852578d7b65521cf55f4a72c43ae5b1f2d4f47bf00c") version("2.3-2", sha256="9c78a4b680debfff0f3ae934575c30d03ded49bc9a7179475384af0ebaf13778") version("2.3-1", sha256="119ba6e3da651aa9594f70a7a35349209534215aa640c2653aeddc6aa25038c3") depends_on("r@3.5.0:", type=("build", "run")) depends_on("r-spatstat-model@3.2-1:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-model@3.2-11.005:", type=("build", "run"), when="@3.2-1:") depends_on("r-spatstat-explore@3.0-6:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-explore@3.2-7.006:", type=("build", "run"), when="@3.2-1:") depends_on("r-spatstat-data@2.1-0:", type=("build", "run")) depends_on("r-spatstat-data@3.0:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-data@3.0-4:", type=("build", "run"), when="@3.1-5:") depends_on("r-spatstat-geom@2.3-0:", type=("build", "run")) depends_on("r-spatstat-geom@3.0-6:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-geom@3.2-9.028:", type=("build", "run"), when="@3.2-1:") depends_on("r-spatstat-random@2.2-0:", type=("build", "run"), when="@2.3-2:") depends_on("r-spatstat-random@3.1-3:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-random@3.2-3.003:", type=("build", "run"), when="@3.2-1:") + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.2-1:") depends_on("r-spatstat-utils@2.2-0:", type=("build", "run")) depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.2-1:") depends_on("r-matrix", type=("build", "run")) depends_on("r-spatstat-sparse@2.0:", type=("build", "run")) depends_on("r-spatstat-sparse@3.0:", type=("build", "run"), when="@3.1-0:") + depends_on("r-spatstat-sparse@3.1-0:", type=("build", "run"), when="@3.2-1:") depends_on("r-spatstat-core@2.3-2:", type=("build", "run"), when="@2.3-2:2.3-2") diff --git a/var/spack/repos/builtin/packages/r-spatstat-model/package.py b/var/spack/repos/builtin/packages/r-spatstat-model/package.py index 1a84bfd784..a29c32b000 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-model/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-model/package.py @@ -32,17 +32,25 @@ class RSpatstatModel(RPackage): cran = "spatstat.model" + version("3.3-1", sha256="5c1c969b5f2bbfdfe91ad31cd912f31b91ec9cc7651ecec86c1d7a562161afa7") version("3.2-3", sha256="8ad7d2644773571a5c579ceebb98b735dccc97e9b4b109ea39b4ce3faedb14ea") depends_on("r@3.5.0:", type=("build", "run")) depends_on("r-spatstat-data@3.0:", type=("build", "run")) + depends_on("r-spatstat-data@3.0-4:", type=("build", "run"), when="@3.2-11:") depends_on("r-spatstat-geom@3.0-5:", type=("build", "run")) + depends_on("r-spatstat-geom@3.3-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-spatstat-random@3.1-4:", type=("build", "run")) + depends_on("r-spatstat-random@3.3-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-spatstat-explore@3.1-0:", type=("build", "run")) + depends_on("r-spatstat-explore@3.3-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-nlme", type=("build", "run")) depends_on("r-rpart", type=("build", "run")) + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run")) + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.3-1:") depends_on("r-spatstat-sparse@3.0:", type=("build", "run")) + depends_on("r-spatstat-sparse@3.1-0:", type=("build", "run"), when="@3.3-1:") depends_on("r-mgcv", type=("build", "run")) depends_on("r-matrix", type=("build", "run")) depends_on("r-abind", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-spatstat-random/package.py b/var/spack/repos/builtin/packages/r-spatstat-random/package.py index 2a8cf21574..f967f4d023 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-random/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-random/package.py @@ -25,6 +25,7 @@ class RSpatstatRandom(RPackage): cran = "spatstat.random" + version("3.3-1", sha256="83026bce8802e14423edfa0a0f9c8279ef74565992bdac1804dfec357988bbd3") version("3.1-4", sha256="a6cd75e187a992fd8dae535f6745e12801635a344ca51bd2fe048debea3df7d3") version("3.0-1", sha256="938c845c063b8781bf894c0a67537e7b2a7c425a4beba4a95ec9d2c37b43e5b6") version("2.2-0", sha256="45f0bbdb9dbd53b6c4151c3cdd098451cf787729717ccbb063cd1f33910e604d") @@ -33,9 +34,13 @@ class RSpatstatRandom(RPackage): depends_on("r-spatstat-data@2.1-0:", type=("build", "run")) depends_on("r-spatstat-data@2.2-0.003:", type=("build", "run"), when="@3.0-1:") depends_on("r-spatstat-data@3.0:", type=("build", "run"), when="@3.1-4:") + depends_on("r-spatstat-data@3.1:", type=("build", "run"), when="@3.3-0:") depends_on("r-spatstat-geom@2.4-0:", type=("build", "run")) depends_on("r-spatstat-geom@2.4-0.023:", type=("build", "run"), when="@3.0-1:") depends_on("r-spatstat-geom@3.0-5:", type=("build", "run"), when="@3.1-4:") + depends_on("r-spatstat-geom@3.3-0:", type=("build", "run"), when="@3.3-0:") + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.3-0:") depends_on("r-spatstat-utils@2.2-0:", type=("build", "run")) depends_on("r-spatstat-utils@2.3-1.003:", type=("build", "run"), when="@3.0-1:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.1-4:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.3-0:") diff --git a/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py b/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py index 932c51884f..e2080bc206 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-sparse/package.py @@ -15,6 +15,7 @@ class RSpatstatSparse(RPackage): cran = "spatstat.sparse" + version("3.1-0", sha256="63be5dc5818339b878a14a39815dab730b28029d51bac5233e88f5e2464bbbe9") version("3.0-1", sha256="2c1cf0ddad366aa4230bd03241a1ef87ed635f53a6943fc4a6c2d371626d0d1c") version("3.0-0", sha256="99be0a3c7592760fdf1668dc0811f75ed91c400390d1ecc3d5e643255f501ad2") version("2.1-1", sha256="9a35ad69715b767b3ae60b02dce05ccf108fcccdf95bbc8f7d02557bcbde7303") @@ -27,3 +28,4 @@ class RSpatstatSparse(RPackage): depends_on("r-spatstat-utils@2.1-0:", type=("build", "run")) depends_on("r-spatstat-utils@3.0-0:", type=("build", "run"), when="@3.0-0:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.0-1:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.1-0:") diff --git a/var/spack/repos/builtin/packages/r-spatstat-univar/package.py b/var/spack/repos/builtin/packages/r-spatstat-univar/package.py new file mode 100644 index 0000000000..6cc988eb30 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-spatstat-univar/package.py @@ -0,0 +1,23 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RSpatstatUnivar(RPackage): + """Estimation of one-dimensional probability distributions including + kernel density estimation, weighted empirical cumulative distribution + functions, Kaplan-Meier and reduced-sample estimators for right-censored + data, heat kernels, kernel properties, quantiles and integration.""" + + homepage = "http://spatstat.org/" + cran = "spatstat.univar" + + license("GPL-2.0-or-later", checked_by="wdconinc") + + version("3.0-0", sha256="00bc501d9bec32231207f0562433193bd680606ce465131caa5e2704b4ff4771") + + depends_on("r@3.5.0:", type=("build", "run"), when="@3.0-0:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@2.0-3.011:") diff --git a/var/spack/repos/builtin/packages/r-spatstat-utils/package.py b/var/spack/repos/builtin/packages/r-spatstat-utils/package.py index 2a5490c177..ab4ddd6c1a 100644 --- a/var/spack/repos/builtin/packages/r-spatstat-utils/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat-utils/package.py @@ -14,6 +14,7 @@ class RSpatstatUtils(RPackage): cran = "spatstat.utils" + version("3.1-0", sha256="c30c3154700005f4bae9b428924248046128f7150b873e36e3897a622f962d3d") version("3.0-2", sha256="be60cd2cf21a6b3f71ba60553c045fd87884a4e57744f60e6eb0a2d096314615") version("3.0-1", sha256="cba1c7806564fd9145ca15edf77233d6ba5609f0989f7812221f5fc1ece0b91a") version("2.3-1", sha256="5b914308df0585993084b5e95967864eea0314c98ed6af58267b64b2235dfe22") @@ -23,3 +24,4 @@ class RSpatstatUtils(RPackage): version("1.15-0", sha256="90e07d730b6939f47f93c939afae10874b2c82bd402960ede4133de67dca2a0c") depends_on("r@3.3.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@3.1-0:") diff --git a/var/spack/repos/builtin/packages/r-spatstat/package.py b/var/spack/repos/builtin/packages/r-spatstat/package.py index 766b10079e..c38424cf60 100644 --- a/var/spack/repos/builtin/packages/r-spatstat/package.py +++ b/var/spack/repos/builtin/packages/r-spatstat/package.py @@ -50,6 +50,7 @@ class RSpatstat(RPackage): license("GPL-2.0-or-later") + version("3.1-1", sha256="5649309818c6e76c8b8ee7b66a25dcbd2b358d90da56f67dd961b5cf9ff55512") version("3.0-5", sha256="b926ed55dfeb95b09fb441f44d85204277eee00e42ac258c0a08baa1ce263bb1") version("2.3-4", sha256="4ea0f8d70b926b92bf4a06521f985a0bb6d573619f5d526957c87860ccb999da") version("2.3-0", sha256="da02443722f2c7ef9d59a2799b7b8002c94cecf73f2b0d2b29280d39f49c4c06") @@ -59,23 +60,31 @@ class RSpatstat(RPackage): depends_on("r@3.3:", type=("build", "run")) depends_on("r@3.5.0:", type=("build", "run"), when="@2.3-0:") depends_on("r-spatstat-model@3.2-3:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-model@3.3-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-explore@3.1-0:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-explore@3.3-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-data@1.4-2:", type=("build", "run")) depends_on("r-spatstat-data@2.1-0:", type=("build", "run"), when="@2.3-0:") depends_on("r-spatstat-data@2.1-2:", type=("build", "run"), when="@2.3-4:") depends_on("r-spatstat-data@3.0-1:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-data@3.1-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-geom@2.3-0:", type=("build", "run"), when="@2.3-0:") depends_on("r-spatstat-geom@2.4-0:", type=("build", "run"), when="@2.3-4:") depends_on("r-spatstat-geom@3.1-0:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-geom@3.3-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-random@2.2-0:", type=("build", "run"), when="@2.3-4:") depends_on("r-spatstat-random@3.1-4:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-random@3.3-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-linnet@2.3-0:", type=("build", "run"), when="@2.3-0:") depends_on("r-spatstat-linnet@2.3-2:", type=("build", "run"), when="@2.3-4:") depends_on("r-spatstat-linnet@3.1-0:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-linnet@3.2-0:", type=("build", "run"), when="@3.1-1:") + depends_on("r-spatstat-univar@3.0-0:", type=("build", "run"), when="@3.1-1:") depends_on("r-spatstat-utils@1.17:", type=("build", "run")) depends_on("r-spatstat-utils@2.2-0:", type=("build", "run"), when="@2.3-0:") depends_on("r-spatstat-utils@2.3-0:", type=("build", "run"), when="@2.3-4:") depends_on("r-spatstat-utils@3.0-2:", type=("build", "run"), when="@3.0-5:") + depends_on("r-spatstat-utils@3.0-5:", type=("build", "run"), when="@3.1-1:") depends_on("r-rpart", type=("build", "run"), when="@:1.64-1") depends_on("r-nlme", type=("build", "run"), when="@:1.64-1") diff --git a/var/spack/repos/builtin/packages/r-spdata/package.py b/var/spack/repos/builtin/packages/r-spdata/package.py index 7a4a7e225e..028bda6521 100644 --- a/var/spack/repos/builtin/packages/r-spdata/package.py +++ b/var/spack/repos/builtin/packages/r-spdata/package.py @@ -20,6 +20,7 @@ class RSpdata(RPackage): cran = "spData" + version("2.3.1", sha256="8c377f2123b7b274c5ca0de656ccd30aaba1b5b245be58a842395311ecc70075") version("2.2.2", sha256="878a58e98b6cf259432149ecb4e5d66ada59466e1b5b0dafa60ec839e90104ed") version("2.2.0", sha256="6e9c0a72f29021a84e9049b147c9e0186f14876a4a1663ad98bbb33440ee901f") version("2.0.1", sha256="c635a3e2e5123b4cdb2e6877b9b09e3d50169e1512a53b2ba2db7fbe63b990fc") diff --git a/var/spack/repos/builtin/packages/r-spdep/package.py b/var/spack/repos/builtin/packages/r-spdep/package.py index 63f980382c..2383c056e1 100644 --- a/var/spack/repos/builtin/packages/r-spdep/package.py +++ b/var/spack/repos/builtin/packages/r-spdep/package.py @@ -23,6 +23,7 @@ class RSpdep(RPackage): license("GPL-2.0-or-later") + version("1.3-5", sha256="ba8efa06ddbc12408f4f6d4c85606d84922131d9c05953e0b23b81f03e56e626") version("1.2-8", sha256="8d9fb4cb10d1035526ad6d9f7a11972efb0e3137dcff176d73df6ebfe96c9190") version("1.2-7", sha256="9dac594825bf2d0aa31e845bfec05d8ce206327840fe455391741dbbdf9c9eea") version("1.2-4", sha256="a9f4d5af56efb1a2bcd3e85fe4d0e8a42896a2c30a790b2487e1ebadf398a677") @@ -37,6 +38,7 @@ class RSpdep(RPackage): depends_on("r@3.3.0:", type=("build", "run"), when="@0.7-8:") depends_on("r-sp@1.0:", type=("build", "run")) depends_on("r-spdata@0.2.6.0:", type=("build", "run"), when="@1.0-2:") + depends_on("r-spdata@2.3.1:", type=("build", "run"), when="@1.3-5:") depends_on("r-sf", type=("build", "run"), when="@1.0-2:") depends_on("r-deldir", type=("build", "run")) depends_on("r-boot@1.3-1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-speedglm/package.py b/var/spack/repos/builtin/packages/r-speedglm/package.py index 9ec7b5a824..e967e7ffc9 100644 --- a/var/spack/repos/builtin/packages/r-speedglm/package.py +++ b/var/spack/repos/builtin/packages/r-speedglm/package.py @@ -16,9 +16,11 @@ class RSpeedglm(RPackage): license("GPL-2.0-or-later") + version("0.3-5", sha256="f8663677c10ff324c5639402060ddd2b1a1e917445cb0f8f84e146b85e82bb4b") version("0.3-4", sha256="1a12db7dbceaaf5cf4f9a0c03e2a2b9f32e91b697daf2ccfe81bbae9ac3046ce") version("0.3-3", sha256="d065d0ee42fb772760fca8d97ad2aa56cd76b1d9ecb4e97478ec362429e16738") version("0.3-2", sha256="5fcaf18324dc754152f528a44894944063303f780d33e58569ea7c306bfc45ac") + depends_on("r-biglm", type=("build", "run"), when="@0.3-5:") depends_on("r-matrix", type=("build", "run")) depends_on("r-mass", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-splancs/package.py b/var/spack/repos/builtin/packages/r-splancs/package.py index 2dbe2fb033..a964aa09ca 100644 --- a/var/spack/repos/builtin/packages/r-splancs/package.py +++ b/var/spack/repos/builtin/packages/r-splancs/package.py @@ -17,9 +17,10 @@ class RSplancs(RPackage): license("GPL-2.0-or-later") + version("2.01-45", sha256="8bccf1d61d7feaab52da07a9c95aa66bcd3986a6b214f13b232c1e2bea4b76d3") version("2.01-43", sha256="b351565e1f69f6c86a29d921d3a18d5896c4586e2ab8c73bb3df8e75630fc448") version("2.01-42", sha256="8c0af4764521e20b629dba6afd5c284e7be48786f378c37668eacfa26d2ef0aa") version("2.01-40", sha256="79744381ebc4a361740a36dca3c9fca9ae015cfe0bd585b7856a664a3da74363") - depends_on("r@2.10:", type=("build", "run")) + depends_on("r@2.10.0:", type=("build", "run")) depends_on("r-sp@0.9:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-splines2/package.py b/var/spack/repos/builtin/packages/r-splines2/package.py new file mode 100644 index 0000000000..bf1ae174c5 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-splines2/package.py @@ -0,0 +1,27 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RSplines2(RPackage): + """Constructs basis functions of B-splines, M-splines, I-splines, convex + splines (C-splines), periodic splines, natural cubic splines, generalized + Bernstein polynomials, their derivatives, and integrals (except C-splines) + by closed-form recursive formulas. It also contains a C++ head-only library + integrated with Rcpp. See Wang and Yan (2021) <doi:10.6339/21-JDS1020> + for details.""" + + homepage = "https://wwenjie.org/splines2" + cran = "splines2" + + license("GPL-3.0-or-later", checked_by="wdconinc") + + version("0.5.3", sha256="c27e7bd12d615095f765f4c1ed3cb9e39b922653aabbe88c4ca3ac31e6a01ddc") + + depends_on("r@3.2.3:", type=("build", "run")) + + depends_on("r-rcpp", type=("build", "run")) + depends_on("r-rcpparmadillo", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-stabledist/package.py b/var/spack/repos/builtin/packages/r-stabledist/package.py index 747a119144..1a8e0c40df 100644 --- a/var/spack/repos/builtin/packages/r-stabledist/package.py +++ b/var/spack/repos/builtin/packages/r-stabledist/package.py @@ -16,6 +16,7 @@ class RStabledist(RPackage): license("GPL-2.0-or-later") + version("0.7-2", sha256="26671710c0d8e3c815b56e6e4f6bc9ea0509db47c0ef5b8acfbfa16095a16fd5") version("0.7-1", sha256="06c5704d3a3c179fa389675c537c39a006867bc6e4f23dd7e406476ed2c88a69") depends_on("r@3.1.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-stanheaders/package.py b/var/spack/repos/builtin/packages/r-stanheaders/package.py index 4ce431492e..f6f63c610a 100644 --- a/var/spack/repos/builtin/packages/r-stanheaders/package.py +++ b/var/spack/repos/builtin/packages/r-stanheaders/package.py @@ -27,6 +27,7 @@ class RStanheaders(RPackage): cran = "StanHeaders" + version("2.32.10", sha256="c3125b8d7dc4c6b7082258b2fa6c9530c2e4714c89ffd08b8e72f4c9f4108582") version("2.21.0-7", sha256="27546e064f0e907e031d9185ad55245d118d82fbe3074ecb1d76fae8b9f2336b") version("2.21.0-6", sha256="a0282a054d0e6ab310ec7edcffa953b77c7e4a858d9ac7028aab1b4fb4ce8cf3") version("2.18.1-10", sha256="8a9f7e22105428e97d14f44f75395c37cf8c809de148d279c620024452b3565a") @@ -37,5 +38,7 @@ class RStanheaders(RPackage): depends_on("r+X", type=("build", "run")) depends_on("r@3.4.0:", type=("build", "run"), when="@2.18.0:") depends_on("r-rcppparallel@5.0.1:", type=("build", "run"), when="@2.21.0:") + depends_on("r-rcppparallel@5.1.4:", type=("build", "run"), when="@2.26.25:") depends_on("r-rcppeigen", type=("build", "run"), when="@2.21.0:") + depends_on("r-rcppeigen@0.3.4.0.0:", type=("build", "run"), when="@2.32.8:") depends_on("pandoc", type="build") diff --git a/var/spack/repos/builtin/packages/r-stars/package.py b/var/spack/repos/builtin/packages/r-stars/package.py index 20f393bbe3..94552ddf7d 100644 --- a/var/spack/repos/builtin/packages/r-stars/package.py +++ b/var/spack/repos/builtin/packages/r-stars/package.py @@ -15,6 +15,7 @@ class RStars(RPackage): cran = "stars" + version("0.6-6", sha256="70ca3509adfb4227ca8910d47c87f587ec06d8ef4577af63fe772757844ec7ac") version("0.6-1", sha256="1f78db3adab9ebbfc9d98c6cc592708d893b5d7fd7fd876af454042ef42204a7") version("0.5-6", sha256="e0413c95423635f7f7b2520813382e911257da8ace9b743da9fe3eab568a9461") @@ -22,7 +23,9 @@ class RStars(RPackage): depends_on("r-abind", type=("build", "run")) depends_on("r-sf@1.0-8:", type=("build", "run")) depends_on("r-sf@1.0-10:", type=("build", "run"), when="@0.6-1:") + depends_on("r-sf@1.0-15:", type=("build", "run"), when="@0.6-5:") depends_on("r-classint@0.4-1:", type=("build", "run")) - depends_on("r-lwgeom", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) depends_on("r-units", type=("build", "run")) + + depends_on("r-lwgeom", type=("build", "run"), when="@:0.6-3") diff --git a/var/spack/repos/builtin/packages/r-statnet-common/package.py b/var/spack/repos/builtin/packages/r-statnet-common/package.py index f02f6d0cb4..e71cf28c47 100644 --- a/var/spack/repos/builtin/packages/r-statnet-common/package.py +++ b/var/spack/repos/builtin/packages/r-statnet-common/package.py @@ -14,6 +14,7 @@ class RStatnetCommon(RPackage): cran = "statnet.common" + version("4.9.0", sha256="a485dc6e363a993d87336fbd1027adb1cd7b9103447fd63904cae4dc3bfc2dd7") version("4.8.0", sha256="def999130673fbcb315fecf3620a2559864f51961a828625aa5cd5fded7946f0") version("4.7.0", sha256="b69731a606b56b729b1917375efafb572b960ce5000a0fc2ec5222fd7d80a1b3") version("4.6.0", sha256="ddad51128b50d465e1d1aca3a53b452810b9ba578e96b08b8f50f5850d7bb21d") diff --git a/var/spack/repos/builtin/packages/r-stringfish/package.py b/var/spack/repos/builtin/packages/r-stringfish/package.py index 14c846404e..729c0b09f9 100644 --- a/var/spack/repos/builtin/packages/r-stringfish/package.py +++ b/var/spack/repos/builtin/packages/r-stringfish/package.py @@ -18,6 +18,7 @@ class RStringfish(RPackage): license("GPL-3.0-only") + version("0.16.0", sha256="3608bc83900246297b38df46954bd9aa3b6f463a56eefbe80cfc713eab797993") version("0.15.7", sha256="34b1703a8876a40860d35f88a94e069832a7d2bc86189ff07af84ff04fd4b735") version("0.15.5", sha256="9df21146a7710e5a9ab4bb53ebc231a580c798b7e541b8d78df53207283f8129") version("0.14.2", sha256="9373cfc715cda1527fd20179435977b8e59e19d8c5ef82a31e519f93fb624ced") diff --git a/var/spack/repos/builtin/packages/r-stringi/package.py b/var/spack/repos/builtin/packages/r-stringi/package.py index abc075ec2a..805cf78970 100644 --- a/var/spack/repos/builtin/packages/r-stringi/package.py +++ b/var/spack/repos/builtin/packages/r-stringi/package.py @@ -22,6 +22,7 @@ class RStringi(RPackage): license("custom") + version("1.8.4", sha256="c219f8f64d1a2bfd4ca9528452d44d30db1899af14f4b9ef248412443bc669f3") version("1.7.12", sha256="efe8ac2900001f986a75db5641fbb24587a6d23de274a6a85c39dfa58921e009") version("1.7.8", sha256="538918b1cd6ed1d8a2dd5ab146ba800a088e99f93c52dcd82615b6e127478b1c") version("1.7.6", sha256="0ea3d5afec5701977ff53de9afbaceb53b00aa34f5fb641cadc1eeb7759119ec") @@ -36,6 +37,7 @@ class RStringi(RPackage): depends_on("r@2.14:", type=("build", "run")) depends_on("r@3.1:", type=("build", "run"), when="@1.6.1:") + depends_on("r@3.4:", type=("build", "run"), when="@1.8.1:") depends_on("icu4c@52:") depends_on("icu4c@55:", when="@1.5.3:") # since version 1.6.1 there is also a SystemRequirement on C++11 diff --git a/var/spack/repos/builtin/packages/r-stringr/package.py b/var/spack/repos/builtin/packages/r-stringr/package.py index 90fcda65fb..97ca2ce28a 100644 --- a/var/spack/repos/builtin/packages/r-stringr/package.py +++ b/var/spack/repos/builtin/packages/r-stringr/package.py @@ -19,6 +19,7 @@ class RStringr(RPackage): license("MIT") + version("1.5.1", sha256="a4adec51bb3f04214b1d8ef40d3a58949f21b1497cbeaf2ba552e0891eef45de") version("1.5.0", sha256="52b159d7700a139111b4caf939e7c9c6ab3e01185181400d70a74c552826633a") version("1.4.1", sha256="ec0d8e90caa3e107f18c188ed313dea8bfd12a738011b0be09ef5362360ddcb1") version("1.4.0", sha256="87604d2d3a9ad8fd68444ce0865b59e2ffbdb548a38d6634796bbd83eeb931dd") @@ -29,12 +30,14 @@ class RStringr(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.3:", type=("build", "run"), when="@1.5.0:") + depends_on("r@3.6:", type=("build", "run"), when="@1.5.1:") depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@1.5.0:") depends_on("r-cli", type=("build", "run"), when="@1.5.0:") depends_on("r-stringi@1.1.7:", type=("build", "run")) depends_on("r-stringi@1.5.3:", type=("build", "run"), when="@1.5.0:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-vctrs", type=("build", "run"), when="@1.5.0:") + depends_on("r-vctrs@0.4.0:", type=("build", "run"), when="@1.5.1:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.5.0:") depends_on("r-glue@1.2.0:", type=("build", "run"), when="@1.3.0:") depends_on("r-glue@1.6.1:", type=("build", "run"), when="@1.5.0:") diff --git a/var/spack/repos/builtin/packages/r-styler/package.py b/var/spack/repos/builtin/packages/r-styler/package.py index a64f522bcc..4fc81952da 100644 --- a/var/spack/repos/builtin/packages/r-styler/package.py +++ b/var/spack/repos/builtin/packages/r-styler/package.py @@ -15,6 +15,7 @@ class RStyler(RPackage): license("MIT") + version("1.10.3", sha256="adb9c22111a8669bdce6d4a5c09e0ad353e07c3488373484a258028203bfda41") version("1.9.1", sha256="c80fa3c062f007645ec820b5b087d4d5784e7797cc88d030ab59fb5823ded0bb") version("1.8.1", sha256="15505fa85f0aa2902bc8af3f00b2aeb205d41a92b77bffbd176d657753ee81e9") version("1.8.0", sha256="4f8b74c1ac158b0a4433b6008da6bb708f3c9ed1c7fb9bb5d79748858cb484c7") @@ -24,6 +25,7 @@ class RStyler(RPackage): depends_on("r@3.4.0:", type=("build", "run"), when="@1.7.0:") depends_on("r@3.5.0:", type=("build", "run"), when="@1.8.0:") + depends_on("r@3.6.0:", type=("build", "run"), when="@1.10.0:") depends_on("r-cli@1.1.0:", type=("build", "run")) depends_on("r-cli@3.1.1:", type=("build", "run"), when="@1.7.0:") depends_on("r-magrittr@1.0.1:", type=("build", "run")) @@ -32,6 +34,7 @@ class RStyler(RPackage): depends_on("r-r-cache@0.14.0:", type=("build", "run")) depends_on("r-r-cache@0.15.0:", type=("build", "run"), when="@1.6.2:") depends_on("r-rlang@0.1.1:", type=("build", "run")) + depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@1.10.0:") depends_on("r-rprojroot@1.1:", type=("build", "run")) depends_on("r-vctrs@0.4.1:", type=("build", "run"), when="@1.8.0:") depends_on("r-withr@1.0.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-subplex/package.py b/var/spack/repos/builtin/packages/r-subplex/package.py index 9199d1e852..25f6eda8ca 100644 --- a/var/spack/repos/builtin/packages/r-subplex/package.py +++ b/var/spack/repos/builtin/packages/r-subplex/package.py @@ -16,6 +16,7 @@ class RSubplex(RPackage): license("GPL-3.0-only") + version("1.9", sha256="07a9ea8cba46a6eec037f8c6e87279c122479ccc560a96bd3086d653f95d69b7") version("1.8", sha256="3bc31d8990380c9f790c9c7d84cb2e39f4945eff934eddfa1196d597465be5a5") version("1.7", sha256="d5ecf4a484936d71cb294f08c3968ef5a8dcbdc861bfc0e97e3b1ab99afff887") version("1.6", sha256="0d05da1622fffcd20a01cc929fc6c2b7df40a8246e7018f7f1f3c175b774cbf9") @@ -24,3 +25,4 @@ class RSubplex(RPackage): version("1.4-1", sha256="94b7b961aaa229a6f025151191ed50272af1394be69f1c41146b9e8c786caec6") depends_on("r@2.5.1:", type=("build", "run")) + depends_on("r@4.1.0:", type=("build", "run"), when="@1.9:") diff --git a/var/spack/repos/builtin/packages/r-survey/package.py b/var/spack/repos/builtin/packages/r-survey/package.py index 9cc9e7b6c6..c9c51f056c 100644 --- a/var/spack/repos/builtin/packages/r-survey/package.py +++ b/var/spack/repos/builtin/packages/r-survey/package.py @@ -21,6 +21,7 @@ class RSurvey(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("4.4-2", sha256="8a4a0f3122f0971f7c8756805add781192c655f507b235801dd78457a8d2f1bd") version("4.1-1", sha256="05e89a1678a39e32bfb41af8a31d643b04fc4d2660a96e701825e6bffcd75a52") version("4.0", sha256="b053f40f4cfa90507ca524f72d3b3a4b4869def52f11f907a14f1c6d90063de1") version("3.36", sha256="90f32e9d2b52eacf881e6717a4b5edfc5a3beb5da516f8372293549589d79475") @@ -31,9 +32,12 @@ class RSurvey(RPackage): depends_on("r@2.16.0:", type=("build", "run"), when="@3.32:") depends_on("r@3.1.0:", type=("build", "run"), when="@3.35:") depends_on("r@3.5.0:", type=("build", "run"), when="@4.1-1:") + depends_on("r@4.1.0:", type=("build", "run"), when="@4.4-2:") depends_on("r-matrix", type=("build", "run"), when="@3.31:") depends_on("r-survival", type=("build", "run"), when="@3.31:") depends_on("r-lattice", type=("build", "run"), when="@3.31:") depends_on("r-minqa", type=("build", "run"), when="@3.34:") depends_on("r-numderiv", type=("build", "run"), when="@3.34:") depends_on("r-mitools@2.4:", type=("build", "run"), when="@3.36:") + depends_on("r-rcpp@0.12.8:", type=("build", "run"), when="@4.4:") + depends_on("r-rcpparmadillo", type=("build", "run"), when="@4.4:") diff --git a/var/spack/repos/builtin/packages/r-survival/package.py b/var/spack/repos/builtin/packages/r-survival/package.py index 79b6b0e029..052c27d368 100644 --- a/var/spack/repos/builtin/packages/r-survival/package.py +++ b/var/spack/repos/builtin/packages/r-survival/package.py @@ -17,6 +17,7 @@ class RSurvival(RPackage): license("LGPL-2.0-or-later") + version("3.7-0", sha256="cd96b08ec928b0028f69c942cc788e190b4543c8518d71deb6d8a712de44feef") version("3.5-5", sha256="1375a509554b0258e04e27baca2e073e179406e2a9a71e6d3e0c777072568476") version("3.4-0", sha256="a48e23d47265fe4d90fb5f0f9fc388906014f8063211980856985db9e89cf812") version("3.3-1", sha256="14878705cd0c7edcfead79011444aa84f680759293bde8634721c49f37cb4dc7") diff --git a/var/spack/repos/builtin/packages/r-svglite/package.py b/var/spack/repos/builtin/packages/r-svglite/package.py index 2003f6a798..babdf515f2 100644 --- a/var/spack/repos/builtin/packages/r-svglite/package.py +++ b/var/spack/repos/builtin/packages/r-svglite/package.py @@ -16,12 +16,14 @@ class RSvglite(RPackage): license("GPL-2.0-or-later") + version("2.1.3", sha256="f0a8564e6f9127f4d1e05cf5a5f36b4e244aee0008e27473e504c63873ef0a54") version("2.1.1", sha256="48700169eec1b05dbee9e2bae000aa84c544617b018cb3ac431a128cfd8dac56") version("2.1.0", sha256="ad40f590c7e80ae83001a3826b6e8394ba733446ed51fd55faeda974ab839c9b") version("2.0.0", sha256="76e625fe172a5b7ce99a67b6d631b037b3f7f0021cfe15f2e15e8851b89defa5") depends_on("r+X", type=("build", "run")) depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@2.1.2:") depends_on("r-systemfonts@1.0.0:", type=("build", "run")) depends_on("r-cpp11", type=("build", "run")) depends_on("libpng") diff --git a/var/spack/repos/builtin/packages/r-sys/package.py b/var/spack/repos/builtin/packages/r-sys/package.py index 117130dc41..bee43018e2 100644 --- a/var/spack/repos/builtin/packages/r-sys/package.py +++ b/var/spack/repos/builtin/packages/r-sys/package.py @@ -19,6 +19,7 @@ class RSys(RPackage): license("MIT") + version("3.4.2", sha256="b7bdce66f0fb681830ea6fb77b5a2c6babb43920abb1eddc733f95c0a63ce5b3") version("3.4.1", sha256="324e6d8fde58264e62bc04867b719c5fd16296de1542689801b8cb13621ecf52") version("3.4", sha256="17f88fbaf222f1f8fd07919461093dac0e7175ae3c3b3264b88470617afd0487") version("3.2", sha256="2819498461fe2ce83d319d1a47844e86bcea6d01d10861818dba289e7099bbcc") diff --git a/var/spack/repos/builtin/packages/r-systemfonts/package.py b/var/spack/repos/builtin/packages/r-systemfonts/package.py index fffb2dcdc7..4d4f38f639 100644 --- a/var/spack/repos/builtin/packages/r-systemfonts/package.py +++ b/var/spack/repos/builtin/packages/r-systemfonts/package.py @@ -21,11 +21,13 @@ class RSystemfonts(RPackage): license("MIT") + version("1.1.0", sha256="1941069bd20320284ec026a38c53cb736be60bda431303ceaf8fd27ae13fb644") version("1.0.4", sha256="ef766c75b942f147d382664a00d6a4930f1bfe0cce9d88943f571682a85a84c0") version("1.0.3", sha256="647c99d5ea6f90a49768ea7b10b39816af6be85168475273369fd973a20dbbba") version("1.0.1", sha256="401db4d9e78e3a5e00b7a0b4fbad7fbb1c584734469b65fe5b7ebe1851c7a797") depends_on("r@3.2.0:", type=("build", "run")) depends_on("r-cpp11@0.2.1:", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@1.1.0:") depends_on("fontconfig") depends_on("freetype") diff --git a/var/spack/repos/builtin/packages/r-tclust/package.py b/var/spack/repos/builtin/packages/r-tclust/package.py index 964e874605..28e5169388 100644 --- a/var/spack/repos/builtin/packages/r-tclust/package.py +++ b/var/spack/repos/builtin/packages/r-tclust/package.py @@ -18,6 +18,7 @@ class RTclust(RPackage): license("GPL-3.0-only") + version("2.0-4", sha256="a6667167778b974afc968340161171a7911415bcc1220dc7f0f350552f560578") version("1.5-4", sha256="2b55da5e351c5054c9627f57a43084518a138a1d8097e35a364db0eff63471a8") version("1.5-2", sha256="492674b30a465e5f4a22ba0ce5556ed4d8e57b29090f9b5b94ad655d064e6f8b") version("1.5-1", sha256="73328b30774bb0767d613d7f2b60b75706b19fab864c712645ea18181f1af327") @@ -30,3 +31,10 @@ class RTclust(RPackage): version("1.1-02", sha256="f73c0d7a495552f901b710cf34e114c0ba401d5a17c48156313245904bcccad4") depends_on("r@2.12.0:", type=("build", "run")) + depends_on("r@3.6.2:", type=("build", "run"), when="@1.5-6:") + + depends_on("r-doparallel", type=("build", "run"), when="@2.0:") + depends_on("r-foreach", type=("build", "run"), when="@2.0:") + depends_on("r-mass", type=("build", "run"), when="@2.0:") + depends_on("r-rcpp@1.0.7:", type=("build", "run"), when="@2.0:") + depends_on("r-rcpparmadillo", type=("build", "run"), when="@2.0:") diff --git a/var/spack/repos/builtin/packages/r-teachingdemos/package.py b/var/spack/repos/builtin/packages/r-teachingdemos/package.py index 72d8ccbcc4..45c58294c5 100644 --- a/var/spack/repos/builtin/packages/r-teachingdemos/package.py +++ b/var/spack/repos/builtin/packages/r-teachingdemos/package.py @@ -15,6 +15,7 @@ class RTeachingdemos(RPackage): cran = "TeachingDemos" + version("2.13", sha256="f80eb952b7d1a0cde3bed8152f9c4e9eceaa3f635209b2af9a11e785e8c0fbcc") version("2.12", sha256="3e75405ce1affa406d6df85e06f96381412bc7a2810b25d8c81bfe64c4698644") version("2.10", sha256="2ef4c2e36ba13e32f66000e84281a3616584c86b255bca8643ff3fe4f78ed704") diff --git a/var/spack/repos/builtin/packages/r-tensora/package.py b/var/spack/repos/builtin/packages/r-tensora/package.py index 1e962ddcdb..0c1c67061f 100644 --- a/var/spack/repos/builtin/packages/r-tensora/package.py +++ b/var/spack/repos/builtin/packages/r-tensora/package.py @@ -18,6 +18,7 @@ class RTensora(RPackage): license("GPL-2.0-or-later") + version("0.36.2.1", sha256="06588261fe7dff6a8edafe2b9d436b39a3b46c754f2ed327ae6322561a617db7") version("0.36.2", sha256="8e8947566bd3b65a54de4269df1abaa3d49cf5bfd2a963c3274a524c8a819ca7") version("0.36.1", sha256="c7ffe12b99867675b5e9c9f31798f9521f14305c9d9f9485b171bcbd8697d09c") version("0.36", sha256="97b3e72f26ca3a756d045008764d787a32c68f0a276fb7a29b6e1b4592fdecf6") diff --git a/var/spack/repos/builtin/packages/r-terra/package.py b/var/spack/repos/builtin/packages/r-terra/package.py index d71f827e72..7f4abc51ed 100644 --- a/var/spack/repos/builtin/packages/r-terra/package.py +++ b/var/spack/repos/builtin/packages/r-terra/package.py @@ -23,6 +23,7 @@ class RTerra(RPackage): license("GPL-3.0-or-later") + version("1.7-78", sha256="658956b79d8a1371aefdf7300316f1756b58d436ba549ade012307684b2d4b7e") version("1.7-29", sha256="3f39b052a34c9f1166a342be4c25bbdc1e2c81402edb734901d63fc6fa547ca5") version("1.6-17", sha256="db888f4220ca511332f4d011345b2b207fcc1de26d2eae473e0eeb5dfd8bbc02") version("1.5-21", sha256="091ee928ccaa6561aa9f8ee6c1c99f139dc89f1653c2a76a035cca14d404f43f") diff --git a/var/spack/repos/builtin/packages/r-tester/package.py b/var/spack/repos/builtin/packages/r-tester/package.py index 3d25497a42..ee8387ad31 100644 --- a/var/spack/repos/builtin/packages/r-tester/package.py +++ b/var/spack/repos/builtin/packages/r-tester/package.py @@ -15,6 +15,7 @@ class RTester(RPackage): license("GPL-3.0-only") + version("0.2.0", sha256="bec8141b8572ca8d19a270a2eaec23aa4c01a167f32f2e05a4bf353418a0020b") version("0.1.7", sha256="b9c645119c21c69450f3d366c911ed92ac7c14ef61652fd676a38fb9d420b5f4") depends_on("r@3.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-testthat/package.py b/var/spack/repos/builtin/packages/r-testthat/package.py index 756b98bad2..dcf74f0b19 100644 --- a/var/spack/repos/builtin/packages/r-testthat/package.py +++ b/var/spack/repos/builtin/packages/r-testthat/package.py @@ -17,6 +17,7 @@ class RTestthat(RPackage): license("MIT") + version("3.2.1.1", sha256="d785ce3975939e28b61048b0e28d881c80904534ff21e5b1a79a0a934124e9f7") version("3.1.7", sha256="1ad86b1739481c6c46359a6634ecc706bf513f34b26d7a62cbc719bbd4658eab") version("3.1.5", sha256="a8f56b9426206ddfc30b550c82ff2f042ebe1c2f5bfd4184aec8facac8f5b7fc") version("3.1.4", sha256="a47eec031b4e186a8bd331031371b2347063a283050eca2adbfaa37d7a6c9c09") @@ -29,34 +30,52 @@ class RTestthat(RPackage): version("1.0.2", sha256="0ef7df0ace1fddf821d329f9d9a5d42296085350ae0d94af62c45bd203c8415e") depends_on("r@3.1:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@3.2.0:") depends_on("r-brio", type=("build", "run"), when="@3.0.1:") + depends_on("r-brio@1.1.3:", type=("build", "run"), when="@3.2.0:") depends_on("r-callr@3.5.1:", type=("build", "run"), when="@3.0.1:") + depends_on("r-callr@3.7.3:", type=("build", "run"), when="@3.2.0:") depends_on("r-cli", type=("build", "run"), when="@2.0.0:") depends_on("r-cli@2.2.0:", type=("build", "run"), when="@3.0.1:") depends_on("r-cli@3.3.0:", type=("build", "run"), when="@3.1.4:") depends_on("r-cli@3.4.0:", type=("build", "run"), when="@3.1.5:") + depends_on("r-cli@3.6.1:", type=("build", "run"), when="@3.2.0:") depends_on("r-desc", type=("build", "run"), when="@3.0.1:") + depends_on("r-desc@1.4.2:", type=("build", "run"), when="@3.2.0:") depends_on("r-digest", type=("build", "run")) - depends_on("r-ellipsis", type=("build", "run"), when="@2.3.2:") - depends_on("r-ellipsis@0.2.0:", type=("build", "run"), when="@3.0.1:") + depends_on("r-digest@0.6.33:", type=("build", "run"), when="@3.2.0:") depends_on("r-evaluate", type=("build", "run"), when="@2.2.0:") + depends_on("r-evaluate@0.21:", type=("build", "run"), when="@3.2.0:") depends_on("r-jsonlite", type=("build", "run"), when="@3.0.1:") + depends_on("r-jsonlite@1.8.7:", type=("build", "run"), when="@3.2.0:") depends_on("r-lifecycle", type=("build", "run"), when="@3.0.1:") + depends_on("r-lifecycle@1.0.3:", type=("build", "run"), when="@3.2.0:") depends_on("r-magrittr", type=("build", "run")) + depends_on("r-magrittr@2.0.3:", type=("build", "run"), when="@3.2.0:") depends_on("r-pkgload", type=("build", "run"), when="@2.3.2:") + depends_on("r-pkgload@1.3.2.1:", type=("build", "run"), when="@3.2.0:") depends_on("r-praise", type=("build", "run")) + depends_on("r-praise@1.0.0:", type=("build", "run"), when="@3.2.0:") depends_on("r-processx", type=("build", "run"), when="@3.0.1:") + depends_on("r-processx@3.8.2:", type=("build", "run"), when="@3.2.0:") depends_on("r-ps@1.3.4:", type=("build", "run"), when="@3.0.1:") + depends_on("r-ps@1.7.5:", type=("build", "run"), when="@3.2.0:") depends_on("r-r6@2.2.0:", type=("build", "run")) + depends_on("r-r6@2.5.1:", type=("build", "run"), when="@3.2.0:") depends_on("r-rlang@0.3.0:", type=("build", "run"), when="@2.0.0:") depends_on("r-rlang@0.4.1:", type=("build", "run"), when="@2.3.2:") depends_on("r-rlang@0.4.9:", type=("build", "run"), when="@3.0.1:") depends_on("r-rlang@1.0.1:", type=("build", "run"), when="@3.1.4:") + depends_on("r-rlang@1.1.1:", type=("build", "run"), when="@3.2.0:") depends_on("r-waldo@0.2.1:", type=("build", "run"), when="@3.0.1:") depends_on("r-waldo@0.2.4:", type=("build", "run"), when="@3.1.1:") depends_on("r-waldo@0.4.0:", type=("build", "run"), when="@3.1.4:") + depends_on("r-waldo@0.5.1:", type=("build", "run"), when="@3.2.0:") depends_on("r-withr@2.0.0:", type=("build", "run"), when="@2.0.0:") depends_on("r-withr@2.3.0:", type=("build", "run"), when="@3.0.1:") depends_on("r-withr@2.4.3:", type=("build", "run"), when="@3.1.2:") + depends_on("r-withr@2.5.0:", type=("build", "run"), when="@3.2.0:") depends_on("r-crayon@1.3.4:", type=("build", "run"), when="@:3.1.4") + depends_on("r-ellipsis", type=("build", "run"), when="@2.3.2:3.2.0") + depends_on("r-ellipsis@0.2.0:", type=("build", "run"), when="@3.0.1:3.2.0") diff --git a/var/spack/repos/builtin/packages/r-textshaping/package.py b/var/spack/repos/builtin/packages/r-textshaping/package.py index 2de9d3270c..1c75b421d1 100644 --- a/var/spack/repos/builtin/packages/r-textshaping/package.py +++ b/var/spack/repos/builtin/packages/r-textshaping/package.py @@ -18,11 +18,14 @@ class RTextshaping(RPackage): license("MIT") + version("0.4.0", sha256="35e940786bb278560de61bb55d4f46f8c86c878d0461613ceb8c98ba9b239d7a") version("0.3.6", sha256="80e2c087962f55ce2811fbc798b09f5638c06c6b28c10cd3cb3827005b902ada") depends_on("r@3.2.0:", type=("build", "run")) - depends_on("r-systemfonts@1.0.0:", type=("build", "run")) depends_on("r-cpp11@0.2.1:", type=("build", "run")) + depends_on("r-lifecycle", type=("build", "run"), when="@0.4.0:") + depends_on("r-systemfonts@1.0.0:", type=("build", "run")) + depends_on("r-systemfonts@1.1.0:", type=("build", "run"), when="@0.4.0:") depends_on("pkgconfig", type="build") depends_on("freetype") depends_on("harfbuzz") diff --git a/var/spack/repos/builtin/packages/r-tictoc/package.py b/var/spack/repos/builtin/packages/r-tictoc/package.py index 7263151423..ad06c0a532 100644 --- a/var/spack/repos/builtin/packages/r-tictoc/package.py +++ b/var/spack/repos/builtin/packages/r-tictoc/package.py @@ -22,6 +22,7 @@ class RTictoc(RPackage): license("Apache-2.0 OR custom") + version("1.2.1", sha256="8fcdb7c9a1e4b4817bcab654effd64dea6ec749a7901d4060d5b5c625fc88833") version("1.2", sha256="f05ea4b4142a90b0dc5d10356be3748625ef86bbd0e4399c56455654165ff20c") version("1.1", sha256="120f868ba276bda70c8edef5d6c092586cf73db0fa02eb5459d8f55350fb474d") version("1.0.1", sha256="a09a1535c417ddf6637bbbda5fca6edab6c7f7b252a64e57e99d4d0748712705") diff --git a/var/spack/repos/builtin/packages/r-tidycensus/package.py b/var/spack/repos/builtin/packages/r-tidycensus/package.py index 19b3865c0d..855763530f 100644 --- a/var/spack/repos/builtin/packages/r-tidycensus/package.py +++ b/var/spack/repos/builtin/packages/r-tidycensus/package.py @@ -20,6 +20,7 @@ class RTidycensus(RPackage): license("MIT") + version("1.6.5", sha256="b846406eeff21cf8035f6cfe0479eadb5fec67e02ef7106294f9d2ddff45f122") version("1.3.2", sha256="ca47323f19c94a3c767bef59986f4a6cb4e455b3eb21ea64f1b3d6339443c515") version("1.2.3", sha256="23bc58bb6e20e1056e40dca55a49576b5e186fdb324f00fa9d5c07fb675f32ff") version("1.2.2", sha256="5cdbb92314061c9d8d3d62f623699fa115d7faae1f4a961d55ab905538f8e7cc") diff --git a/var/spack/repos/builtin/packages/r-tidygraph/package.py b/var/spack/repos/builtin/packages/r-tidygraph/package.py index 0b4496c6ed..4331c3fa90 100644 --- a/var/spack/repos/builtin/packages/r-tidygraph/package.py +++ b/var/spack/repos/builtin/packages/r-tidygraph/package.py @@ -19,6 +19,7 @@ class RTidygraph(RPackage): license("MIT") + version("1.3.1", sha256="aac1d4bb9396081bbeecbde11a3cd1a26a56bd6b1f608a628b359cb37c18ac1a") version("1.2.3", sha256="b09c06b12583ae57edd1ec01e61a0e1b7a4b82358361fb28a6046dbece475687") version("1.2.2", sha256="d555cad6b5b56bd2edaa29950a0fd15942e972db21561bfd5cd64fd9a8936470") version("1.2.1", sha256="2fbdc2db18c5ad48c72f14d2d04111f4b0d4c434ad87c280eda3bcb98673ad36") @@ -30,6 +31,8 @@ class RTidygraph(RPackage): depends_on("r-dplyr@0.8.5:", type=("build", "run"), when="@1.2.0:") depends_on("r-igraph", type=("build", "run")) depends_on("r-igraph@1.3.0:", type=("build", "run"), when="@1.2.3:") + depends_on("r-igraph@2.0.0:", type=("build", "run"), when="@1.3.1:") + depends_on("r-lifecycle", type=("build", "run"), when="@1.3.0:") depends_on("r-magrittr", type=("build", "run")) depends_on("r-rlang", type=("build", "run")) depends_on("r-r6", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-tidyr/package.py b/var/spack/repos/builtin/packages/r-tidyr/package.py index 1a690a07a2..3e9d7eb748 100644 --- a/var/spack/repos/builtin/packages/r-tidyr/package.py +++ b/var/spack/repos/builtin/packages/r-tidyr/package.py @@ -21,6 +21,7 @@ class RTidyr(RPackage): license("MIT") + version("1.3.1", sha256="e820c261cb5543f572f49276a7bdc7302aa4215da4bf850b1b939a315353835d") version("1.3.0", sha256="8d532b9366fdd3ec9827b51830e559a49d073425007c766025f0e603964e0a9d") version("1.2.1", sha256="6971766d3663dc75c2328ab257816f4e42d9fdc05c2d87d171b8b9b5ecce61af") version("1.2.0", sha256="8cd01da9e97827521d01ea50b9225f2705c46b7538bbf74bec6249a04c1213a8") @@ -33,6 +34,7 @@ class RTidyr(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4.0:", type=("build", "run"), when="@1.3.0:") + depends_on("r@3.6:", type=("build", "run"), when="@1.3.1:") depends_on("r-dplyr@0.7.0:", type=("build", "run")) depends_on("r-dplyr@0.8.2:", type=("build", "run"), when="@1.1.2:") depends_on("r-dplyr@1.0.0:", type=("build", "run"), when="@1.2.0:") @@ -46,6 +48,7 @@ class RTidyr(RPackage): depends_on("r-purrr@1.0.1:", type=("build", "run"), when="@1.3.0:") depends_on("r-rlang", type=("build", "run")) depends_on("r-rlang@1.0.4:", type=("build", "run"), when="@1.3.0:") + depends_on("r-rlang@1.1.1:", type=("build", "run"), when="@1.3.1:") depends_on("r-tibble", type=("build", "run")) depends_on("r-tibble@2.1.1:", type=("build", "run"), when="@1.1.2:") depends_on("r-tidyselect@0.2.5:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-tidyselect/package.py b/var/spack/repos/builtin/packages/r-tidyselect/package.py index 91c1235e7b..e7fcba5f2c 100644 --- a/var/spack/repos/builtin/packages/r-tidyselect/package.py +++ b/var/spack/repos/builtin/packages/r-tidyselect/package.py @@ -17,6 +17,7 @@ class RTidyselect(RPackage): license("MIT") + version("1.2.1", sha256="169e97ba0bbfbcdf4a80534322751f87a04370310c40e27f04aac6525d45903c") version("1.2.0", sha256="538d26b727e37d618e2efd3b00836048f103112a03e6994bf07a02392e269e3b") version("1.1.2", sha256="0389a3b15417954a30d6d692f6ebdd3d0f318cb94a5c9b05365df2f4ea1d8270") version("1.1.1", sha256="18eb6a6746196a81ce19ee6cbf1db0c33f494177b97e2419312ef25a00ae486b") @@ -38,10 +39,11 @@ class RTidyselect(RPackage): depends_on("r-vctrs@0.2.2:", type=("build", "run"), when="@1.1.0:") depends_on("r-vctrs@0.3.0:", type=("build", "run"), when="@1.1.1:") depends_on("r-vctrs@0.4.1:", type=("build", "run"), when="@1.2.0:") + depends_on("r-vctrs@0.5.2:", type=("build", "run"), when="@1.2.1:") depends_on("r-rcpp@0.12.0:", type=("build", "run"), when="@:0.2.5") depends_on("r-cli@3.3.0:", type=("build", "run"), when="@1.2.0:") depends_on("r-ellipsis", type=("build", "run"), when="@1.1.0:1.1.2") - depends_on("r-purrr", type=("build", "run")) + depends_on("r-purrr", type=("build", "run"), when="@:1.1.2") depends_on("r-purrr@0.3.2:", type=("build", "run"), when="@1.1.0:1.1.2") diff --git a/var/spack/repos/builtin/packages/r-tidytree/package.py b/var/spack/repos/builtin/packages/r-tidytree/package.py index 53ec7b519e..9636cedcd1 100644 --- a/var/spack/repos/builtin/packages/r-tidytree/package.py +++ b/var/spack/repos/builtin/packages/r-tidytree/package.py @@ -18,6 +18,7 @@ class RTidytree(RPackage): license("Artistic-2.0") + version("0.4.6", sha256="dba909ba767283fa76795a67e048ff1c8cd339c7e44f64c9698c70ecb3d92292") version("0.4.2", sha256="cb831a66d8afa5e21f5072e4fbebcbd2228881090d0040f87605f5aeefda155e") version("0.4.1", sha256="fbc4364d17e1b1c26ed06af0cdf36c88a5bc562fdbd4731ab179e30bba4009eb") version("0.3.9", sha256="12435d4f4c4d734b2a758cb13eb3b44bdfa8fdfa79a6e81fb99f7ce3a5d82edf") diff --git a/var/spack/repos/builtin/packages/r-tiff/package.py b/var/spack/repos/builtin/packages/r-tiff/package.py index b99b115da6..d133e132af 100644 --- a/var/spack/repos/builtin/packages/r-tiff/package.py +++ b/var/spack/repos/builtin/packages/r-tiff/package.py @@ -17,6 +17,7 @@ class RTiff(RPackage): license("GPL-2.0-only OR GPL-3.0-only") + version("0.1-12", sha256="df10ce719f92597572763182f7cb03686b8d7fb9123d036a4daf5b10738e815c") version("0.1-11", sha256="b8c3ea15114d972f8140541c7b01f5ce2e5322af1f63c1a083aaf766fd3eec75") version("0.1-10", sha256="535154e89e85e14fe697469d2c59826a44c7937e7eca2eaca1aee6b0fe320afe") version("0.1-6", sha256="623bd9c16a426df7e6056738c5d91da86ea9b49df375eea6b5127e4e458dc4fb") diff --git a/var/spack/repos/builtin/packages/r-tigris/package.py b/var/spack/repos/builtin/packages/r-tigris/package.py index cb556f39c8..909fe240ea 100644 --- a/var/spack/repos/builtin/packages/r-tigris/package.py +++ b/var/spack/repos/builtin/packages/r-tigris/package.py @@ -16,6 +16,7 @@ class RTigris(RPackage): license("MIT") + version("2.1", sha256="796bed6ce003323815d606886472bf21c101656fca8a593daa3b69cb3bd6fd97") version("2.0.1", sha256="d87c6b0c11ffb967699d345c6bfcfa82581a0753e1130bf0c927b2960b074d8c") version("1.6.1", sha256="927e8da3f7120bcc10f0b4ded95687512693e069f082eea7aea6302a2f1b2db2") version("1.6", sha256="fa14fbbaf44f5ade1cc92e6e4e4ed2e775bc7c106310711d16b0135a948a1661") diff --git a/var/spack/repos/builtin/packages/r-timechange/package.py b/var/spack/repos/builtin/packages/r-timechange/package.py index 27425f56bd..97ffb606e8 100644 --- a/var/spack/repos/builtin/packages/r-timechange/package.py +++ b/var/spack/repos/builtin/packages/r-timechange/package.py @@ -21,6 +21,7 @@ class RTimechange(RPackage): license("GPL-3.0-only") + version("0.3.0", sha256="d85c0b5514ab9578d16032e703c33f197feaed1a424c834ebfcbf0ad46ae46b4") version("0.2.0", sha256="3d602008052123daef94a5c3f5154c5461b4ec0432ab70c37273d7ddd252f7f1") version("0.1.1", sha256="8503919d233d7d7b81fe47692f0f2d6742ff4cae7320a5522bf98f077f5d7f70") diff --git a/var/spack/repos/builtin/packages/r-timedate/package.py b/var/spack/repos/builtin/packages/r-timedate/package.py index 60d51b2794..c299e1ba86 100644 --- a/var/spack/repos/builtin/packages/r-timedate/package.py +++ b/var/spack/repos/builtin/packages/r-timedate/package.py @@ -21,6 +21,7 @@ class RTimedate(RPackage): cran = "timeDate" + version("4032.109", sha256="402841bda47e8c31f49773de2ff5447e9780bc7c8af5fb18be9287b546fcb958") version("4022.108", sha256="a5949b4fe2f6bdff751fc0793df8e3150cc25c078d48a28c066c10a6c4bfceef") version("4021.106", sha256="14adf1ec6cbd80f11a243fa66ea943725a7a4c75923ae2d8e424235d500b10e2") version("3043.102", sha256="377cba03cddab8c6992e31d0683c1db3a73afa9834eee3e95b3b0723f02d7473") diff --git a/var/spack/repos/builtin/packages/r-tinytex/package.py b/var/spack/repos/builtin/packages/r-tinytex/package.py index 754386ac72..71efa6f83a 100644 --- a/var/spack/repos/builtin/packages/r-tinytex/package.py +++ b/var/spack/repos/builtin/packages/r-tinytex/package.py @@ -20,6 +20,7 @@ class RTinytex(RPackage): license("MIT") + version("0.52", sha256="932a713b9fdd52fe8869e8c38d03f15602f2c02ec543d4dabffde2a3981f513a") version("0.45", sha256="0c2fbbd09e80af80ca6b685bf0653f070da97b85413d39af966aba28f376e92c") version("0.42", sha256="205f7a1978118aa38b6d9f7d3e1667c635da262b43967d1a879520284c2e22b1") version("0.39", sha256="f22e9b77c200fe44cc073b759c2b2bc3310a2382d897282548aa02dcbabc25ed") diff --git a/var/spack/repos/builtin/packages/r-tinytiger/package.py b/var/spack/repos/builtin/packages/r-tinytiger/package.py index 930f366c34..832df344c2 100644 --- a/var/spack/repos/builtin/packages/r-tinytiger/package.py +++ b/var/spack/repos/builtin/packages/r-tinytiger/package.py @@ -23,13 +23,15 @@ class RTinytiger(RPackage): license("MIT") + version("0.0.9", sha256="fe9b1098a2d1d4722f8a7657a9244afcd3d6b7f4f112fc6a92c2fb75da07de59") version("0.0.4", sha256="818328b5095d9e8b302f1a04d004cd3ec6e62d945dbd757fe15e9ab768a7459e") version("0.0.3", sha256="841d92dd4185b9bff5eef0d3635805c5a3efb1bc4ff0a1101ef264417e37921c") depends_on("r@2.0.0:", type=("build", "run")) depends_on("r@2.10:", type=("build", "run"), when="@0.0.4:") - depends_on("r-rlang") depends_on("r-cli") depends_on("r-glue") depends_on("r-curl") depends_on("r-sf") + + depends_on("r-rlang", type=("build", "run"), when="@:0.0.8") diff --git a/var/spack/repos/builtin/packages/r-tseries/package.py b/var/spack/repos/builtin/packages/r-tseries/package.py index 55c8888de3..bf8fa57c60 100644 --- a/var/spack/repos/builtin/packages/r-tseries/package.py +++ b/var/spack/repos/builtin/packages/r-tseries/package.py @@ -13,6 +13,7 @@ class RTseries(RPackage): license("GPL-2.0-only") + version("0.10-57", sha256="18754bb7642728916e30e67cb75462a296699b9b1f2ef1fb9803199f00f89bee") version("0.10-53", sha256="ec388ee6d022752bbebbecbf22d793d31f3734982e3f2e3ffd8dde14bffcca56") version("0.10-52", sha256="9399c8dbedb3b44b8b3b854f6e8867e0a14f3727a7aa66ec9c6eff069ead8f45") version("0.10-51", sha256="a55f20704883710ab58ea479e20cf0f263c50d54282f693793cda4af664c207f") @@ -23,6 +24,8 @@ class RTseries(RPackage): version("0.10-42", sha256="827f79858715c700e8cabd2c27853ba88ad0e05eb043bc94e126b155a75546c4") depends_on("r@2.10.0:", type=("build", "run")) + depends_on("r@3.4.0:", type=("build", "run"), when="@0.10-57:") + depends_on("r-jsonlite", type=("build", "run"), when="@0.10-54:") depends_on("r-quadprog", type=("build", "run")) depends_on("r-zoo", type=("build", "run")) depends_on("r-quantmod@0.4-9:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-ttr/package.py b/var/spack/repos/builtin/packages/r-ttr/package.py index 74b7203b52..9517b98fcd 100644 --- a/var/spack/repos/builtin/packages/r-ttr/package.py +++ b/var/spack/repos/builtin/packages/r-ttr/package.py @@ -15,6 +15,7 @@ class RTtr(RPackage): cran = "TTR" + version("0.24.4", sha256="89732b9c359bae2f41cd23db649f0897c10fab0702d780c4c25a997322710284") version("0.24.3", sha256="4d9aef32647664be5cf965b05f21ed62cde9425fa87c21530852e05ef7aaba87") version("0.24.2", sha256="2587b988d9199474a19470b9b999b99133d0d8aa45410813e05c5f0ed763711b") version("0.23-4", sha256="eb17604da986213b3b924f0af65c3d089502a658a253ee34f6b8f6caccf6bfa2") diff --git a/var/spack/repos/builtin/packages/r-tweenr/package.py b/var/spack/repos/builtin/packages/r-tweenr/package.py index 254f43f96f..ec6b9f4230 100644 --- a/var/spack/repos/builtin/packages/r-tweenr/package.py +++ b/var/spack/repos/builtin/packages/r-tweenr/package.py @@ -19,6 +19,7 @@ class RTweenr(RPackage): license("MIT") + version("2.0.3", sha256="efabe512a45d653787ba40f87f3e23add4037f88573a102fa9ac7a5ff43c8cbe") version("2.0.2", sha256="64bbfded418d4880e3636f434571c20303d2f66be6950d64583a864fbb661ff3") version("1.0.2", sha256="1805f575da6705ca4e5ec1c4605222fc826ba806d9ff9af41770294fe08ff69f") version("1.0.1", sha256="efd68162cd6d5a4f6d833dbf785a2bbce1cb7b9f90ba3fb060931a4bd705096b") diff --git a/var/spack/repos/builtin/packages/r-tzdb/package.py b/var/spack/repos/builtin/packages/r-tzdb/package.py index 8f606a1a1e..596b3a4acd 100644 --- a/var/spack/repos/builtin/packages/r-tzdb/package.py +++ b/var/spack/repos/builtin/packages/r-tzdb/package.py @@ -23,10 +23,12 @@ class RTzdb(RPackage): license("MIT") + version("0.4.0", sha256="4253c66041bdddfd463c98183bf0052fbcacdb7c5cff9eadbb858b3dcf9d3a23") version("0.3.0", sha256="6099f0ec1fba692b51b4360aa776902a39f10dae815933c31994b8e4d4277038") version("0.2.0", sha256="c335905d452b400af7ed54b916b5246cb3f47ede0602911a2bcb25a1cf56d5a9") depends_on("r@3.3:", type=("build", "run")) depends_on("r@3.4.0:", type=("build", "run"), when="@0.3.0:") + depends_on("r@3.5.0:", type=("build", "run"), when="@0.4.0:") depends_on("r-cpp11@0.4.0:", type=("build", "run")) depends_on("r-cpp11@0.4.2:", type=("build", "run"), when="@0.3.0:") diff --git a/var/spack/repos/builtin/packages/r-ucminf/package.py b/var/spack/repos/builtin/packages/r-ucminf/package.py index ba6dc6e92a..76ec1fef1b 100644 --- a/var/spack/repos/builtin/packages/r-ucminf/package.py +++ b/var/spack/repos/builtin/packages/r-ucminf/package.py @@ -19,5 +19,8 @@ class RUcminf(RPackage): license("GPL-2.0-or-later") + version("1.2.2", sha256="4bdb6ae769fa49a167cfdc92dc544ba3b6f34df6c08810cfb0c55613aff5bd29") version("1.1-4.1", sha256="01a5b6f373ad267d22e2c29b8f7b6e31a1a148e48f4413e6a38e51aa049976b2") version("1.1-4", sha256="a2eb382f9b24e949d982e311578518710f8242070b3aa3314a331c1e1e7f6f07") + + depends_on("r@3.5.0:", when="@1.2.0:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-units/package.py b/var/spack/repos/builtin/packages/r-units/package.py index 01ebe5a976..83719b38ca 100644 --- a/var/spack/repos/builtin/packages/r-units/package.py +++ b/var/spack/repos/builtin/packages/r-units/package.py @@ -22,6 +22,7 @@ class RUnits(RPackage): license("GPL-2.0-only") + version("0.8-5", sha256="d95e80af760b053e10a1e33ce1f0c1280a84e84bd4b1d9c34d1fe9fc153603b1") version("0.8-1", sha256="d3e1ba246b4c97205bc3da3cf45d6b5bd5c196b8d421b84b4e94b2090985cd9a") version("0.8-0", sha256="9c46fe138e8c1c3d3a51268776412f02d09673656516148cccb71b1071beb21a") version("0.7-2", sha256="b90be023431100632b3081747af9e743e615452b4ad38810991f7b024b7040eb") diff --git a/var/spack/repos/builtin/packages/r-urca/package.py b/var/spack/repos/builtin/packages/r-urca/package.py index 2dcbdb474b..178ceca85b 100644 --- a/var/spack/repos/builtin/packages/r-urca/package.py +++ b/var/spack/repos/builtin/packages/r-urca/package.py @@ -16,6 +16,7 @@ class RUrca(RPackage): license("GPL-2.0-or-later") + version("1.3-4", sha256="fe3d6ce5041f1e7caaf3137dfb6187640bcd2d208e19c59ee1202355ac0acb16") version("1.3-3", sha256="43baa8b6735f8325a69e6a43686f4fecd77a0eb7f60da25b4fc5c51b9271e9f1") version("1.3-0", sha256="621cc82398e25b58b4a16edf000ed0a1484d9a0bc458f734e97b6f371cc76aaa") diff --git a/var/spack/repos/builtin/packages/r-usethis/package.py b/var/spack/repos/builtin/packages/r-usethis/package.py index 497cfe55a7..70eafc1274 100644 --- a/var/spack/repos/builtin/packages/r-usethis/package.py +++ b/var/spack/repos/builtin/packages/r-usethis/package.py @@ -18,6 +18,7 @@ class RUsethis(RPackage): license("MIT") + version("3.0.0", sha256="98f850f9ceaae37eb16ccd1232275b4e8f818c115c67151fa99096c477f7ccb5") version("2.1.6", sha256="31dc6707577065ac1d4acb7d4cbf135942727c5cc2699092198c544be86f6818") version("2.1.5", sha256="7d539e16ecdc1cd45ba1a215d42d8b9c16bc38280ddd27048003dbb37b16f052") version("2.0.0", sha256="22aa2b59f36a8701a4648554c7b0e010253bf917a0f431f06efac7d8a6b59854") @@ -26,6 +27,7 @@ class RUsethis(RPackage): depends_on("r@3.2:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@2.1.5:") + depends_on("r@3.6:", type=("build", "run"), when="@2.2.0:") depends_on("r-cli", type=("build", "run"), when="@1.6.1:") depends_on("r-cli@3.0.1:", type=("build", "run"), when="@2.1.5:") depends_on("r-clipr@0.3.0:", type=("build", "run")) @@ -33,6 +35,7 @@ class RUsethis(RPackage): depends_on("r-curl@2.7:", type=("build", "run")) depends_on("r-desc", type=("build", "run")) depends_on("r-desc@1.4.0:", type=("build", "run"), when="@2.1.5:") + depends_on("r-desc@1.4.2:", type=("build", "run"), when="@2.2.0:") depends_on("r-fs@1.3.0:", type=("build", "run")) depends_on("r-gert@1.0.2:", type=("build", "run"), when="@2.0.0:") depends_on("r-gert@1.4.1:", type=("build", "run"), when="@2.1.5:") @@ -50,6 +53,7 @@ class RUsethis(RPackage): depends_on("r-rlang@0.4.3:", type=("build", "run"), when="@1.6.1:") depends_on("r-rlang@0.4.10:", type=("build", "run"), when="@2.1.5:") depends_on("r-rlang@1.0.0:", type=("build", "run"), when="@2.1.6:") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@2.2.0:") depends_on("r-rprojroot@1.2:", type=("build", "run")) depends_on("r-rstudioapi", type=("build", "run")) depends_on("r-whisker", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-utf8/package.py b/var/spack/repos/builtin/packages/r-utf8/package.py index ac87cb8e04..09a2d22c50 100644 --- a/var/spack/repos/builtin/packages/r-utf8/package.py +++ b/var/spack/repos/builtin/packages/r-utf8/package.py @@ -16,6 +16,7 @@ class RUtf8(RPackage): license("Apache-2.0 OR custom") + version("1.2.4", sha256="418f824bbd9cd868d2d8a0d4345545c62151d321224cdffca8b1ffd98a167b7d") version("1.2.3", sha256="c0a88686591f4ad43b52917d0964e9df4c62d8858fe25135a1bf357dfcbd6347") version("1.2.2", sha256="a71aee87d43a9bcf29249c7a5a2e9ca1d2a836e8d5ee3a264d3062f25378d8f4") version("1.1.4", sha256="f6da9cadfc683057d45f54b43312a359cf96ec2731c0dda18a8eae31d1e31e54") diff --git a/var/spack/repos/builtin/packages/r-uuid/package.py b/var/spack/repos/builtin/packages/r-uuid/package.py index a8b3bcc731..deecee8427 100644 --- a/var/spack/repos/builtin/packages/r-uuid/package.py +++ b/var/spack/repos/builtin/packages/r-uuid/package.py @@ -17,6 +17,7 @@ class RUuid(RPackage): license("MIT") + version("1.2-1", sha256="f90e49733d7d6ea7cf91abdc07b7d0e9a34a4b993e6914d754f0621281fc4b96") version("1.1-0", sha256="e75b50ee7dc8c4c8e7083023e954ffd1c6a004431bf5e9094463e46aa760f42f") version("1.0-3", sha256="456e4633659f20242fd7cd585ad005a3e07265f1d1db383fca6794c8ac2c8346") version("0.1-4", sha256="98e0249dda17434bfa209c2058e9911e576963d4599be9f7ea946e664f8ca93e") diff --git a/var/spack/repos/builtin/packages/r-uwot/package.py b/var/spack/repos/builtin/packages/r-uwot/package.py index c5e5d78dbd..c18015609e 100644 --- a/var/spack/repos/builtin/packages/r-uwot/package.py +++ b/var/spack/repos/builtin/packages/r-uwot/package.py @@ -24,6 +24,7 @@ class RUwot(RPackage): license("GPL-3.0-or-later") + version("0.2.2", sha256="d9938c43d29530d4b36d1b2649cc679b09945a740db2cd3a266242b1aa9a6cd1") version("0.1.14", sha256="8016e8192b7e72604ca71840cbe43fa1d2caed8a8ad7cbf20e85cd3b384a9fe0") version("0.1.11", sha256="4fcf90f1369a2a1f01db9e05a2365b155b2ada8e51e1f7f3ba5122d86affd41b") version("0.1.10", sha256="6ee1b6027bce679cd5a35f647f516a5b327632234bcf323c7f3d5b5e10807d23") @@ -36,6 +37,7 @@ class RUwot(RPackage): depends_on("r-rcppannoy@0.0.17:", type=("build", "run"), when="@0.1.10:") depends_on("r-irlba", type=("build", "run")) depends_on("r-rcppprogress", type=("build", "run")) + depends_on("r-rspectra", type=("build", "run"), when="@0.2.2:") depends_on("r-dqrng", type=("build", "run")) depends_on("r-rcppparallel", type=("build", "run"), when="@:0.1.3") diff --git a/var/spack/repos/builtin/packages/r-v8/package.py b/var/spack/repos/builtin/packages/r-v8/package.py index 423c952e82..0d4dbf747d 100644 --- a/var/spack/repos/builtin/packages/r-v8/package.py +++ b/var/spack/repos/builtin/packages/r-v8/package.py @@ -15,6 +15,7 @@ class RV8(RPackage): cran = "V8" + version("5.0.0", sha256="668fb759f973016e1e6aae21d711e83226d6895b43b2476c77feadf47896b21a") version("4.3.0", sha256="7e395c4faed0d2a9d647820269d2d374953fc67c6108d57d63e93ec570dbe0d0") version("4.2.2", sha256="50653527198637a37c010052f394839f50a3c643975aac1d04e42d36f8e5313b") version("4.2.1", sha256="99881af4798d11da0adccd8e4e1aa5dc4adccf5e3572724c14f6f90c2b8c3ff0") diff --git a/var/spack/repos/builtin/packages/r-vcd/package.py b/var/spack/repos/builtin/packages/r-vcd/package.py index 14933c740c..47bb1bb196 100644 --- a/var/spack/repos/builtin/packages/r-vcd/package.py +++ b/var/spack/repos/builtin/packages/r-vcd/package.py @@ -20,6 +20,7 @@ class RVcd(RPackage): license("GPL-2.0-only") + version("1.4-12", sha256="c931ef115529931cddb1d5caec4d4d3569ebf12aadde719b2f5019812c9ded88") version("1.4-11", sha256="7a54e855689e1429d46e0d4d7a956f96b0ad2fd0c7084fa023902c55849e0932") version("1.4-10", sha256="7188192afa289350cc1b89790f4f8f5a5114c1c88bee7715a0c8f5347aa0b35b") version("1.4-9", sha256="a5b420ad5ff1a27fa92f98099a8b43f2dded7e5f60297b3e4d947ad6f039568f") diff --git a/var/spack/repos/builtin/packages/r-vcfr/package.py b/var/spack/repos/builtin/packages/r-vcfr/package.py index f8320ac87e..a818ee8b6b 100644 --- a/var/spack/repos/builtin/packages/r-vcfr/package.py +++ b/var/spack/repos/builtin/packages/r-vcfr/package.py @@ -22,6 +22,7 @@ class RVcfr(RPackage): maintainers("dorton21") + version("1.15.0", sha256="df17e48b961d96f2a78a1a15037df674f57d0445f2669e401543d8082f0b49fa") version("1.14.0", sha256="8576dbd2e5a707dabc20acbbea3fe18b6a783910e622423ac203609a386204cb") version("1.13.0", sha256="743ce845732ada638f0f8a2cd789cd06aa25d818fec87c8bdb998f7c77089ebc") version("1.12.0", sha256="dd87ff010365de363864a44ca49887c0fdad0dd18d0d9c66e44e39c2d4581d52") diff --git a/var/spack/repos/builtin/packages/r-vegan/package.py b/var/spack/repos/builtin/packages/r-vegan/package.py index 5821e4b266..9fa33c733c 100644 --- a/var/spack/repos/builtin/packages/r-vegan/package.py +++ b/var/spack/repos/builtin/packages/r-vegan/package.py @@ -16,6 +16,7 @@ class RVegan(RPackage): license("GPL-2.0-only") + version("2.6-6.1", sha256="7d2a5e700a6639bef203d6e35dfe6e8cc1dd7440957334317b61a9dafbb90b60") version("2.6-4", sha256="5d8ad4bebe79ae2bbd840a34100cf54c62f089c66ea484a542a201afcba21d06") version("2.6-2", sha256="ab77d110c959d19b0c6268ae0c8f78c897e2419eff3f1f7b19c1bb2f8db7c059") version("2.5-7", sha256="e63b586951ea7d8b0118811f329c700212892ec1db3b93951603ce1d68aa462a") @@ -27,6 +28,7 @@ class RVegan(RPackage): depends_on("r@3.1.0:", type=("build", "run"), when="@2.5-1") depends_on("r@3.2.0:", type=("build", "run"), when="@2.5-2:") depends_on("r@3.4.0:", type=("build", "run"), when="@2.5-5:") + depends_on("r@4.1.0:", type=("build", "run"), when="@2.6-6:") depends_on("r-permute@0.9-0:", type=("build", "run")) depends_on("r-lattice", type=("build", "run")) depends_on("r-mass", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-vgam/package.py b/var/spack/repos/builtin/packages/r-vgam/package.py index 1a51917d72..74191bc257 100644 --- a/var/spack/repos/builtin/packages/r-vgam/package.py +++ b/var/spack/repos/builtin/packages/r-vgam/package.py @@ -28,6 +28,7 @@ class RVgam(RPackage): cran = "VGAM" + version("1.1-11", sha256="de9d909bd2bcfccf55d24f96999e0780ca45ec29030e227a722eb24e378b33a5") version("1.1-8", sha256="d4c0f1d4e356d88ab6f39c05076ff97ebef6d20b7fbf1b0fa31d40c73d0ad1cc") version("1.1-7", sha256="a4c52d392332477eac557c84b732f3c03dd48f75db3884e23c71cf99d991757e") version("1.1-6", sha256="446a61bac5dd4794e05d20c2f3901eec54afac52c6e23ce2787c5575170dd417") diff --git a/var/spack/repos/builtin/packages/r-vioplot/package.py b/var/spack/repos/builtin/packages/r-vioplot/package.py index 8cf9bf66ac..59eab53e5d 100644 --- a/var/spack/repos/builtin/packages/r-vioplot/package.py +++ b/var/spack/repos/builtin/packages/r-vioplot/package.py @@ -16,6 +16,7 @@ class RVioplot(RPackage): license("BSD-3-Clause") + version("0.5.0", sha256="b04e91ccb810573d13a2ac1136bc6e4747c4c663fa53ff1ce7327c1a13530965") version("0.4.0", sha256="5729b483e3a4f7c81d2cc22c8bc5211b64e289734e9da5b5696c4974067867b5") version("0.3.7", sha256="06475d9a47644245ec91598e9aaef7db1c393802d9fc314420ac5139ae56adb6") version("0.3.5", sha256="1b64833c1bd6851036cf1c400c7d0036a047e71def94a399c897263b4b303e2a") diff --git a/var/spack/repos/builtin/packages/r-vipor/package.py b/var/spack/repos/builtin/packages/r-vipor/package.py index aa0b4a3273..3151ccbb1e 100644 --- a/var/spack/repos/builtin/packages/r-vipor/package.py +++ b/var/spack/repos/builtin/packages/r-vipor/package.py @@ -17,7 +17,9 @@ class RVipor(RPackage): license("GPL-2.0-or-later") + version("0.4.7", sha256="baad41e9ddaa13b5a1db1abab34253b27d5b99e5a6a649b2036aaf1483370b9e") version("0.4.5", sha256="7d19251ac37639d6a0fed2d30f1af4e578785677df5e53dcdb2a22771a604f84") version("0.4.4", sha256="5abfd7869dae42ae2e4f52206c23433a43b485b1220685e445877ee5864a3f5c") depends_on("r@3.0.0:", type=("build", "run")) + depends_on("r@3.5.0:", type=("build", "run"), when="@0.4.7:") diff --git a/var/spack/repos/builtin/packages/r-viridis/package.py b/var/spack/repos/builtin/packages/r-viridis/package.py index 8807a1a301..4de67f1f7c 100644 --- a/var/spack/repos/builtin/packages/r-viridis/package.py +++ b/var/spack/repos/builtin/packages/r-viridis/package.py @@ -21,6 +21,7 @@ class RViridis(RPackage): license("MIT") + version("0.6.5", sha256="862b5cb6be115deea0207cdd3c8bb33de28552cfdc29900777512fd488d0005c") version("0.6.2", sha256="69b58cd1d992710a08b0b227fd0a9590430eea3ed4858099412f910617e41311") version("0.5.1", sha256="ddf267515838c6eb092938133035cee62ab6a78760413bfc28b8256165701918") version("0.5.0", sha256="fea477172c1e11be40554545260b36d6ddff3fe6bc3bbed87813ffb77c5546cd") diff --git a/var/spack/repos/builtin/packages/r-viridislite/package.py b/var/spack/repos/builtin/packages/r-viridislite/package.py index 4b6a08da39..d9b31c46c7 100644 --- a/var/spack/repos/builtin/packages/r-viridislite/package.py +++ b/var/spack/repos/builtin/packages/r-viridislite/package.py @@ -19,6 +19,7 @@ class RViridislite(RPackage): cran = "viridisLite" + version("0.4.2", sha256="893f111d31deccd2cc959bc9db7ba2ce9020a2dd1b9c1c009587e449c4cce1a1") version("0.4.1", sha256="a896db1ccae5fc1a8b3764d02f24cef74ef7a8341cf9f3401c4efe799870ea97") version("0.4.0", sha256="849955dc8ad9bc52bdc50ed4867fd92a510696fc8294e6971efa018437c83c6a") version("0.3.0", sha256="780ea12e7c4024d5ba9029f3a107321c74b8d6d9165262f6e64b79e00aa0c2af") diff --git a/var/spack/repos/builtin/packages/r-vroom/package.py b/var/spack/repos/builtin/packages/r-vroom/package.py index 9843483ddf..99af883c81 100644 --- a/var/spack/repos/builtin/packages/r-vroom/package.py +++ b/var/spack/repos/builtin/packages/r-vroom/package.py @@ -19,6 +19,7 @@ class RVroom(RPackage): license("MIT") + version("1.6.5", sha256="7bdca21e58c9c5049d7445d182f59fd399193cb2f4318d083de0a559ec9b5761") version("1.6.1", sha256="eb0e33d53212f9c7e8b38d632c98bd5015365cc13f55dadb15ff0d404b31807c") version("1.6.0", sha256="a718ccdf916442693af5392944774d8aec5ce48f417871f9de84dd1089d26ca6") version("1.5.7", sha256="d087cb148f71c222fc89199d03df2502689149873414a6d89c2f006d3a109fde") @@ -26,6 +27,7 @@ class RVroom(RPackage): depends_on("r@3.1:", type=("build", "run")) depends_on("r@3.4:", type=("build", "run"), when="@1.6.0:") + depends_on("r@3.6:", type=("build", "run"), when="@1.6.4:") depends_on("r-bit64", type=("build", "run")) depends_on("r-crayon", type=("build", "run")) depends_on("r-cli", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-waldo/package.py b/var/spack/repos/builtin/packages/r-waldo/package.py index 69b70bcd05..77ba7a5e26 100644 --- a/var/spack/repos/builtin/packages/r-waldo/package.py +++ b/var/spack/repos/builtin/packages/r-waldo/package.py @@ -17,10 +17,12 @@ class RWaldo(RPackage): license("MIT") + version("0.5.2", sha256="82cdae1ab2c5e7e5dbf5c6bdf832020b46e152732053fb45de7c9a81afdf2e05") version("0.4.0", sha256="57ee89eec9bcbba58cf8fa29c8e097f038768c30833eaf812682826333127eaa") version("0.3.1", sha256="ec2c8c1afbc413f8db8b6b0c6970194a875f616ad18e1e72a004bc4497ec019b") version("0.2.3", sha256="1fbab22fe9be6ca8caa3df7306c763d7025d81ab6f17b85daaf8bdc8c9455c53") + depends_on("r@3.6:", type=("build", "run"), when="@0.5.2:") depends_on("r-cli", type=("build", "run")) depends_on("r-diffobj", type=("build", "run")) depends_on("r-diffobj@0.3.4:", type=("build", "run"), when="@0.3.1:") diff --git a/var/spack/repos/builtin/packages/r-webshot/package.py b/var/spack/repos/builtin/packages/r-webshot/package.py index 044732bf6b..9f63294f24 100644 --- a/var/spack/repos/builtin/packages/r-webshot/package.py +++ b/var/spack/repos/builtin/packages/r-webshot/package.py @@ -16,6 +16,7 @@ class RWebshot(RPackage): license("GPL-2.0-only") + version("0.5.5", sha256="d675913ccac80e0af8ee396f95a24124eae6c42d80aed9f47f7a88218ecbb913") version("0.5.4", sha256="3dc2b9baef7855e1deea060276b9ccc6375eee36b7100987cbb1f8e5cd7a8f24") version("0.5.3", sha256="b7c4f2be61c8c4730202a9c3604072478e30cb85b423b7497cd703cc3f49dbc0") version("0.5.2", sha256="f183dc970157075b51ac543550a7a48fa3428b9c6838abb72fe987c21982043f") diff --git a/var/spack/repos/builtin/packages/r-wgcna/package.py b/var/spack/repos/builtin/packages/r-wgcna/package.py index b11908f105..55ffd8739e 100644 --- a/var/spack/repos/builtin/packages/r-wgcna/package.py +++ b/var/spack/repos/builtin/packages/r-wgcna/package.py @@ -20,6 +20,7 @@ class RWgcna(RPackage): cran = "WGCNA" + version("1.72-5", sha256="03439143ff235c17f0dbca7dd6362afa8ddb5a72594f5c2df1c6df1caca2e79d") version("1.72-1", sha256="1dbf82761ef3e76464b18fc9f698ad0f971aafecabf66ca937b950930bd57fdc") version("1.71", sha256="21f5349e888ea76241912600ee5c35a0d2fd50180568b9b08b2b597f099bf708") version("1.70-3", sha256="b9843b839728183af6b746f239e9519d438b294613362b556002acdb8522cbd4") diff --git a/var/spack/repos/builtin/packages/r-withr/package.py b/var/spack/repos/builtin/packages/r-withr/package.py index b678ee0b11..b0ec21dda4 100644 --- a/var/spack/repos/builtin/packages/r-withr/package.py +++ b/var/spack/repos/builtin/packages/r-withr/package.py @@ -18,6 +18,7 @@ class RWithr(RPackage): license("MIT") + version("3.0.1", sha256="d573f1ac2f733c7dd89669feb495d68f1f15d7a9774473c2e46a9848945a3841") version("2.5.0", sha256="37317b3ed790a08407072993a05ab255f6305f95a12a16e0e28aa6aa80fc8bc0") version("2.4.3", sha256="9bdac7459ccc6c2d599ecfd132a7f0aa68d958942d9fe7dbb0442c9eda129d4c") version("2.4.2", sha256="48f96a4cb780cf6fd5fbbea1f1eb04ea3102d7a4a644cae1ed1e91139dcbbac8") @@ -29,3 +30,4 @@ class RWithr(RPackage): depends_on("r@3.0.2:", type=("build", "run")) depends_on("r@3.2.0:", type=("build", "run"), when="@2.2:") + depends_on("r@3.6.0:", type=("build", "run"), when="@3.0.1:") diff --git a/var/spack/repos/builtin/packages/r-wk/package.py b/var/spack/repos/builtin/packages/r-wk/package.py index 4b3497b89d..d445018ee3 100644 --- a/var/spack/repos/builtin/packages/r-wk/package.py +++ b/var/spack/repos/builtin/packages/r-wk/package.py @@ -20,6 +20,7 @@ class RWk(RPackage): license("MIT") + version("0.9.2", sha256="33675edd9baedb09bf69a3a55fec3190e2bf57a5f4f63f94bc06861b5e83e5f8") version("0.7.2", sha256="6f8b72f54e2efea62fda8bc897124b43a39b81cffa9569103d06d95f946eab2f") version("0.7.0", sha256="e24327d38f2ff2d502c67c60eba3b4e44079a64ed8b805df64f231dc4712a2de") version("0.6.0", sha256="af2c2837056a6dcc9f64d5ace29601d6d668c95769f855ca0329648d7326eaf5") diff --git a/var/spack/repos/builtin/packages/r-writexl/package.py b/var/spack/repos/builtin/packages/r-writexl/package.py new file mode 100644 index 0000000000..84f8d76b47 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-writexl/package.py @@ -0,0 +1,20 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RWritexl(RPackage): + """Zero-dependency data frame to xlsx exporter based on 'libxlsxwriter'. + Fast and no Java or Excel required.""" + + homepage = "https://docs.ropensci.org/writexl/" + cran = "writexl" + + license("BSD-2-Clause", checked_by="wdconinc") + + version("1.5.0", sha256="e253dc58f00abf51e9b727ae132e8b301e359fb23df0afc40c3ebec3fb096dce") + + depends_on("zlib-api", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-wru/package.py b/var/spack/repos/builtin/packages/r-wru/package.py index ef07ef21b4..a945fa30b9 100644 --- a/var/spack/repos/builtin/packages/r-wru/package.py +++ b/var/spack/repos/builtin/packages/r-wru/package.py @@ -25,6 +25,7 @@ class RWru(RPackage): license("GPL-3.0-or-later") + version("3.0.3", sha256="8430fc83609cda110eb340d104d408d362110d15d23208e7f5213cfeeb4a13b5") version("1.0.1", sha256="80b3f54cb2de77ea005755a2de3acfb923a1d380c0dbd52bc4d3e3fcb1d6f1fc") version("1.0.0", sha256="4eae65644981d0b99d3610adf40340b3606f40e6cd578e76a745524ba927e417") version("0.1-12", sha256="896ef4718109ab9fee686f050a3269cbab1589ef2aff7a45fc11a67f7bb35a29") @@ -45,6 +46,7 @@ class RWru(RPackage): depends_on("r@3.2.0:", type=("build", "run"), when="@0.0-1:") depends_on("r@3.5.0:", type=("build", "run"), when="@0.0-10:") depends_on("r@4.1.0:", type=("build", "run"), when="@1.0.0:") + depends_on("r-cli", type=("build", "run"), when="@3.0.0:") depends_on("r-devtools", type=("build", "run"), when="@0.0-2:0.1-12") depends_on("r-devtools@1.10.0:", type=("build", "run"), when="@0.1-1:0.1-12") depends_on("r-dplyr", type=("build", "run"), when="@1.0.0:") @@ -53,6 +55,8 @@ class RWru(RPackage): depends_on("r-purrr", type=("build", "run"), when="@1.0.0:") depends_on("r-rcpp", type=("build", "run"), when="@1.0.0:") depends_on("r-rcpparmadillo", type=("build", "run"), when="@1.0.0:") + depends_on("r-rlang", type=("build", "run"), when="@3.0.0:") depends_on("r-piggyback", type=("build", "run"), when="@1.0.0:") depends_on("r-piggyback@0.1.4:", type=("build", "run"), when="@1.0.0:") depends_on("r-pl94171", type=("build", "run"), when="@1.0.0:") + depends_on("r-tidyr", type=("build", "run"), when="@3.0.0:") diff --git a/var/spack/repos/builtin/packages/r-xfun/package.py b/var/spack/repos/builtin/packages/r-xfun/package.py index 57f44f4912..84cc89d068 100644 --- a/var/spack/repos/builtin/packages/r-xfun/package.py +++ b/var/spack/repos/builtin/packages/r-xfun/package.py @@ -16,6 +16,7 @@ class RXfun(RPackage): license("MIT") + version("0.47", sha256="999874fdbf4df2e686a3cb134bfef782c0d3eb0141006191ca1eda94ce232c4b") version("0.39", sha256="d0ecaabb243dd3496da6029932fcdd4772914843de7ffd0b78a172efde1356c9") version("0.34", sha256="50e76c1febb988c044e44fb78e1abc1ba681173c9ff3c336f4c0ad71e6a2853d") version("0.33", sha256="45fbc2d252867b69bbde64d4a4e3d2e049ad1d3a84984e9cfb242d8d1f41ee6c") @@ -24,3 +25,5 @@ class RXfun(RPackage): version("0.24", sha256="e3e39a95202f6db4f6de3a8b9a344074a4944a3a8a522d44971390c905e2b583") version("0.20", sha256="284239d12a3d5ea7d1ef8b1382fb0a7a4661af54c85510501279681871da7c10") version("0.8", sha256="c2f8ecf8b57ddec02f9be7f417d9e22fc1ae2c7db8d70aa703fc62bf4a5c5416") + + depends_on("r@3.2.0:", when="@0.47:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-xgboost/package.py b/var/spack/repos/builtin/packages/r-xgboost/package.py index 9abb3f87a8..317c910a4d 100644 --- a/var/spack/repos/builtin/packages/r-xgboost/package.py +++ b/var/spack/repos/builtin/packages/r-xgboost/package.py @@ -23,6 +23,7 @@ class RXgboost(RPackage): license("Apache-2.0 OR custom") + version("1.7.8.1", sha256="394d6fd00b2fe97549c7a7e6598df86448cdfbd7c0af45b0c17f7b9e81bc1be9") version("1.7.5.1", sha256="4ec0833f206f84e5983e9f373ea64903bec488f751fba6f75a6f4702b1c965bc") version("1.6.0.1", sha256="9ae99a20997e1b02ffd21cabada2a55e53f5754746238ee900de5eb6cd964ebd") version("1.5.0.2", sha256="4750b9a289d8cb685291939eed7c493bb42c5cc154ef98e13100abb1727eab13") @@ -40,9 +41,6 @@ class RXgboost(RPackage): depends_on("r-jsonlite@1.0:", type=("build", "run"), when="@1.5.0.2:") depends_on("gmake", type="build") - # This is not listed as required, but installation fails without it - # ERROR: dependency 'stringr' is not available for package 'xgboost' - depends_on("r-stringr", type=("build", "run")) - + depends_on("r-stringr", type=("build", "run"), when="@:0.7") depends_on("r-stringi@0.5.2:", type=("build", "run"), when="@:0.90.0.2") depends_on("r-magrittr@1.5:", type=("build", "run"), when="@:1.3.2.1") diff --git a/var/spack/repos/builtin/packages/r-xlconnect/package.py b/var/spack/repos/builtin/packages/r-xlconnect/package.py index a91a83c1bd..841cea86d5 100644 --- a/var/spack/repos/builtin/packages/r-xlconnect/package.py +++ b/var/spack/repos/builtin/packages/r-xlconnect/package.py @@ -14,6 +14,7 @@ class RXlconnect(RPackage): cran = "XLConnect" + version("1.0.10", sha256="e3c267cb1e6a6fb3a9fb132e60649182ee7a28e4e9188c72786fb843aad6e2b4") version("1.0.7", sha256="821dba231c3c3147455e7525119b51e5dc001984c638b7ce519d0974b32de677") version("1.0.6", sha256="b233b9f74d1464b78d5dd28bd8a1fa46ca6254518da2d3bda3c978a3f4aaa4f9") version("1.0.5", sha256="975c2ef57f28ccfac79ae5d285b7e82e60791fb121052616c10bc52e2bca16ad") diff --git a/var/spack/repos/builtin/packages/r-xml/package.py b/var/spack/repos/builtin/packages/r-xml/package.py index 7c69fe12e6..a66775fda7 100644 --- a/var/spack/repos/builtin/packages/r-xml/package.py +++ b/var/spack/repos/builtin/packages/r-xml/package.py @@ -15,6 +15,7 @@ class RXml(RPackage): cran = "XML" + version("3.99-0.17", sha256="6e233265ff69ff2f59f56fe4abc5af70e2cfa6d99aec6ad2afd2bf2c0d98a2d8") version("3.99-0.14", sha256="2cb6a61a4d8d89e311994f47df09913d4ce5281317d42c78af4aafd75a31f1f9") version("3.99-0.12", sha256="cb209425c886bf405dc03fda8854e819bd9b2d4e4b031c71c5120b7302a36d14") version("3.99-0.11", sha256="c523bd8e6419d44a477038396e9c3b3ec70a67ed85a0c9bfa8b9445f91647fc8") diff --git a/var/spack/repos/builtin/packages/r-xml2/package.py b/var/spack/repos/builtin/packages/r-xml2/package.py index 33165efa43..306c5aa0c3 100644 --- a/var/spack/repos/builtin/packages/r-xml2/package.py +++ b/var/spack/repos/builtin/packages/r-xml2/package.py @@ -16,6 +16,7 @@ class RXml2(RPackage): license("MIT") + version("1.3.6", sha256="e81991ff99bff3616dde8683c1327194e3ea64fa3b8062f52d8ce32673dd308f") version("1.3.3", sha256="cb4e9c0d31618ed67d2bfa4c7b5e52680e11612ed356a8164b541d44163c1c8d") version("1.3.2", sha256="df22f9e7e3189d8c9b8804eaf0105324fdac983cffe743552f6d76613600a4cf") version("1.2.2", sha256="3050f147c4335be2925a576557bbda36bd52a5bba3110d47b740a2dd811a78f4") @@ -23,7 +24,10 @@ class RXml2(RPackage): version("1.1.1", sha256="00f3e3b66b76760c19da5f6dddc98e6f30de36a96b211e59e1a3f4ff58763116") depends_on("r@3.1.0:", type=("build", "run")) + depends_on("r@3.6.0:", type=("build", "run"), when="@1.3.6:") depends_on("libxml2") - depends_on("r-rcpp@0.12.12:", type=("build", "run"), when="@:1.2") depends_on("r-bh", type=("build", "run"), when="@:1.1.1") + depends_on("r-cli", type=("build", "run"), when="@1.3.6:") + depends_on("r-rcpp@0.12.12:", type=("build", "run"), when="@:1.2") + depends_on("r-rlang@1.1.0:", type=("build", "run"), when="@1.3.6:") diff --git a/var/spack/repos/builtin/packages/r-xopen/package.py b/var/spack/repos/builtin/packages/r-xopen/package.py index e208642641..577246068b 100644 --- a/var/spack/repos/builtin/packages/r-xopen/package.py +++ b/var/spack/repos/builtin/packages/r-xopen/package.py @@ -16,6 +16,7 @@ class RXopen(RPackage): license("MIT") + version("1.0.1", sha256="e3b278b8c324a1aa2650141dd89d01253eea5c2555007422c797915689b29aec") version("1.0.0", sha256="e207603844d69c226142be95281ba2f4a056b9d8cbfae7791ba60535637b3bef") depends_on("r@3.1:", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-xts/package.py b/var/spack/repos/builtin/packages/r-xts/package.py index af45b05ae0..468a19f8f9 100644 --- a/var/spack/repos/builtin/packages/r-xts/package.py +++ b/var/spack/repos/builtin/packages/r-xts/package.py @@ -18,6 +18,7 @@ class RXts(RPackage): license("GPL-2.0-or-later") + version("0.14.0", sha256="d28b16eefa9876a815bad3fc204779c197e3a0d7796b8dae8856fe153f5fcfd9") version("0.13.1", sha256="2c3907c6d0162e48d1898647105bbb32cfe0cb005788481a64ee675a941d825d") version("0.13.0", sha256="188e4d1d8c3ec56a544dfb9da002e8aac80b9303d0a5a1f62ff0e960aeef9674") version("0.12.2", sha256="9c287ceaeb758ff4c9596be6a688db5683d50b45e7610e6d068891ca10dca743") diff --git a/var/spack/repos/builtin/packages/r-yaimpute/package.py b/var/spack/repos/builtin/packages/r-yaimpute/package.py index bee3635d39..6fda7d1e8c 100644 --- a/var/spack/repos/builtin/packages/r-yaimpute/package.py +++ b/var/spack/repos/builtin/packages/r-yaimpute/package.py @@ -22,6 +22,7 @@ class RYaimpute(RPackage): cran = "yaImpute" + version("1.0-34", sha256="b4c898c95fca784480bbbc239c78c85dc9f45a96c34c563ea7e81248ef8a8a73") version("1.0-33", sha256="58595262eb1bc9ffeeadca78664c418ea24b4e894744890c00252c5ebd02512c") version("1.0-32", sha256="08eee5d851b80aad9c7c80f9531aadd50d60e4b16b3a80657a50212269cd73ff") diff --git a/var/spack/repos/builtin/packages/r-yaml/package.py b/var/spack/repos/builtin/packages/r-yaml/package.py index f8cb214c85..d9ada94424 100644 --- a/var/spack/repos/builtin/packages/r-yaml/package.py +++ b/var/spack/repos/builtin/packages/r-yaml/package.py @@ -16,6 +16,7 @@ class RYaml(RPackage): license("BSD-3-Clause") + version("2.3.10", sha256="e236d42d366e361d4855aa4f520260debd53a31e4786442b94770b045da02a6d") version("2.3.7", sha256="d20cb219e0f9c48aba02f132f81cfa9ecda5e22c925e36726840218ed56680ab") version("2.3.6", sha256="5dd19d8d6654ef2e4ccd6216ce8e96ca5185ae6143f95194955f6908a6e1ba26") version("2.3.5", sha256="3edf6c0554a0e184a25e8bec5721a2e66b4ab0dceb3737428e22705e52eb5140") diff --git a/var/spack/repos/builtin/packages/r-yulab-utils/package.py b/var/spack/repos/builtin/packages/r-yulab-utils/package.py index 30137e8782..a5de07b573 100644 --- a/var/spack/repos/builtin/packages/r-yulab-utils/package.py +++ b/var/spack/repos/builtin/packages/r-yulab-utils/package.py @@ -13,6 +13,15 @@ class RYulabUtils(RPackage): cran = "yulab.utils" + version("0.1.6", sha256="589be7ad1425f7d84dc3748f352fc432e494edb725209c05e28ca2a44f34beec") version("0.0.6", sha256="973a51b8d1284060aec34e94849eea6783439dbcbf85083dd4f1a5df4f927b25") version("0.0.5", sha256="6ecd4dc5dae40e86b7a462fdac3ab8c0b276dcae5a284eb43390a05b01e3056b") version("0.0.4", sha256="38850663de53a9166b8e85deb85be1ccf1a5b310bbe4355f3b8bc823ed1b49ae") + + depends_on("r-cli", when="@0.1.0:", type=("build", "run")) + depends_on("r-digest", when="@0.1.0:", type=("build", "run")) + depends_on("r-fs", when="@0.1.0:", type=("build", "run")) + depends_on("r-httr2", when="@0.1.6:", type=("build", "run")) + depends_on("r-rlang", when="@0.0.7:", type=("build", "run")) + + depends_on("r-memoise", when="@0.0.7:0.1.5", type=("build", "run")) diff --git a/var/spack/repos/builtin/packages/r-zcompositions/package.py b/var/spack/repos/builtin/packages/r-zcompositions/package.py index 110f4a120e..67ce6f10be 100644 --- a/var/spack/repos/builtin/packages/r-zcompositions/package.py +++ b/var/spack/repos/builtin/packages/r-zcompositions/package.py @@ -16,6 +16,7 @@ class RZcompositions(RPackage): cran = "zCompositions" + version("1.5.0-4", sha256="73188e1e065a042723ed7a48df04e22317b204222d40744b83e8c392aae16aaf") version("1.4.0-1", sha256="33ee11f635cb87cc9c0617e1cfc91f1ac41c6cfe2b70fc441e226015939230e7") version("1.4.0", sha256="a00d7d0ba861988b1836e947fd521d58137a4def04a5d7aa73a099314b7e530c") version("1.3.4", sha256="ae22c86fe92368a26265933f42eecc518b9b69e7d9b698bc31bfaabfc3c48e95") diff --git a/var/spack/repos/builtin/packages/r-zip/package.py b/var/spack/repos/builtin/packages/r-zip/package.py index 8f17fba457..4d0dfe08de 100644 --- a/var/spack/repos/builtin/packages/r-zip/package.py +++ b/var/spack/repos/builtin/packages/r-zip/package.py @@ -17,6 +17,7 @@ class RZip(RPackage): license("MIT") + version("2.3.1", sha256="83754408781c525917f36535865d28214893de0778b5f337e050cb543cacc28f") version("2.3.0", sha256="33eba844922af9981732ee6ec1582d46cf04c562344f09a0f0f14a22c6f74543") version("2.2.2", sha256="e16cde23bb283efbe9b6bce19575c716c371d09033b42514471ccb444c0a8ea4") version("2.2.1", sha256="14873d0874813139411c120d8b209af71e4e087871eeb963f235411eb1061422") |