diff options
| -rw-r--r-- | var/spack/repos/builtin/packages/htslib/package.py | 17 |
1 files changed, 16 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py index 3b4b9fcf2d..a267809a4d 100644 --- a/var/spack/repos/builtin/packages/htslib/package.py +++ b/var/spack/repos/builtin/packages/htslib/package.py @@ -42,18 +42,23 @@ class Htslib(AutotoolsPackage): "libcurl", default=True, description="Enable libcurl-based support for http/https/etc URLs," - " for versions >= 1.3. This also enables S3 and GCS support.", + " for versions >= 1.3. This also enables S3 and GCS support by default.", ) variant( "libdeflate", default=True, description="use libdeflate for faster crc and deflate algorithms", ) + variant("gcs", default=True, description="enable gcs url support", when="@1.5:+libcurl") + variant("s3", default=True, description="enable s3 url support", when="@1.5:+libcurl") + variant("plugins", default=False, description="enable support for separately compiled plugins") + variant("pic", default=True, description="Compile with PIC support") depends_on("zlib-api") depends_on("bzip2", when="@1.4:") depends_on("xz", when="@1.4:") depends_on("curl", when="@1.3:+libcurl") + depends_on("openssl", when="+s3") depends_on("libdeflate", when="@1.8:+libdeflate") depends_on("m4", when="@1.2") @@ -76,6 +81,11 @@ class Htslib(AutotoolsPackage): url = "https://github.com/samtools/htslib/releases/download/{0}/htslib-{0}.tar.bz2" return url.format(version.dotted) + def flag_handler(self, name, flags): + if name == "cflags" and self.spec.satisfies("+pic"): + flags.append(self.compiler.cc_pic_flag) + return (flags, None, None) + def configure_args(self): spec = self.spec args = [] @@ -83,6 +93,11 @@ class Htslib(AutotoolsPackage): if spec.satisfies("@1.3:"): args.extend(self.enable_or_disable("libcurl")) + if spec.satisfies("@1.5:"): + args.extend(self.enable_or_disable("s3")) + args.extend(self.enable_or_disable("gcs")) + args.extend(self.enable_or_disable("plugins")) + if spec.satisfies("@1.8:"): args.extend(self.enable_or_disable("libdeflate")) |