diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/fasttree/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/fasttree/package.py | 13 |
1 files changed, 4 insertions, 9 deletions
diff --git a/var/spack/repos/builtin/packages/fasttree/package.py b/var/spack/repos/builtin/packages/fasttree/package.py index 419ad9da9c..75ff08847a 100644 --- a/var/spack/repos/builtin/packages/fasttree/package.py +++ b/var/spack/repos/builtin/packages/fasttree/package.py @@ -8,24 +8,19 @@ from spack import * class Fasttree(Package): """FastTree infers approximately-maximum-likelihood phylogenetic - trees from alignments of nucleotide or protein sequences. - FastTree can handle alignments with up to a million of sequences - in a reasonable amount of time and memory.""" + trees from alignments of nucleotide or protein sequences. + """ homepage = "http://www.microbesonline.org/fasttree" - url = "http://www.microbesonline.org/fasttree/FastTree-2.1.10.c" + url = "http://www.microbesonline.org/fasttree/FastTree-2.1.10.c" version('2.1.10', sha256='54cb89fc1728a974a59eae7a7ee6309cdd3cddda9a4c55b700a71219fc6e926d', expand=False, url='http://www.microbesonline.org/fasttree/FastTree-2.1.10.c') - phases = ['build', 'install'] - - def build(self, spec, prefix): + def install(self, spec, prefix): cc = Executable(spack_cc) cc('-O3', self.compiler.openmp_flag, '-DOPENMP', '-finline-functions', '-funroll-loops', '-Wall', '-oFastTreeMP', 'FastTree-' + format(spec.version.dotted) + '.c', '-lm') - - def install(self, spec, prefix): mkdir(prefix.bin) install('FastTreeMP', prefix.bin) |