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Diffstat (limited to 'var/spack/repos/builtin/packages/libbeagle/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/libbeagle/package.py | 47 |
1 files changed, 47 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/libbeagle/package.py b/var/spack/repos/builtin/packages/libbeagle/package.py new file mode 100644 index 0000000000..4d064a063b --- /dev/null +++ b/var/spack/repos/builtin/packages/libbeagle/package.py @@ -0,0 +1,47 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Libbeagle(AutotoolsPackage): + """Beagle performs genotype calling, genotype phasing, imputation of + ungenotyped markers, and identity-by-descent segment detection.""" + + homepage = "https://github.com/beagle-dev/beagle-lib" + url = "https://github.com/beagle-dev/beagle-lib/archive/beagle_release_2_1_2.tar.gz" + + version('2.1.2', '1107614e86f652f8ee45c1c92f2af3d4') + + depends_on('autoconf', type='build') + depends_on('automake', type='build') + depends_on('libtool', type='build') + depends_on('m4', type='build') + + depends_on('subversion', type='build') + depends_on('pkg-config', type='build') + + def url_for_version(self, version): + url = "https://github.com/beagle-dev/beagle-lib/archive/beagle_release_{0}.tar.gz" + return url.format(version.underscored) |