diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/suite-sparse/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/suite-sparse/package.py | 152 |
1 files changed, 111 insertions, 41 deletions
diff --git a/var/spack/repos/builtin/packages/suite-sparse/package.py b/var/spack/repos/builtin/packages/suite-sparse/package.py index a01a961112..3069a52127 100644 --- a/var/spack/repos/builtin/packages/suite-sparse/package.py +++ b/var/spack/repos/builtin/packages/suite-sparse/package.py @@ -3,6 +3,8 @@ # # SPDX-License-Identifier: (Apache-2.0 OR MIT) +import os.path + from spack.package import * @@ -17,6 +19,9 @@ class SuiteSparse(Package): license("Apache-2.0") + version("7.7.0", sha256="529b067f5d80981f45ddf6766627b8fc5af619822f068f342aab776e683df4f3") + version("7.3.1", sha256="b512484396a80750acf3082adc1807ba0aabb103c2e09be5691f46f14d0a9718") + version("7.2.1", sha256="304e959a163ff74f8f4055dade3e0b5498d9aa3b1c483633bb400620f521509f") version("5.13.0", sha256="59c6ca2959623f0c69226cf9afb9a018d12a37fab3a8869db5f6d7f83b6b147d") version("5.12.0", sha256="5fb0064a3398111976f30c5908a8c0b40df44c6dd8f0cc4bfa7b9e45d8c647de") version("5.11.0", sha256="fdd957ed06019465f7de73ce931afaf5d40e96e14ae57d91f60868b8c123c4c8") @@ -39,6 +44,10 @@ class SuiteSparse(Package): version("4.5.5", sha256="80d1d9960a6ec70031fecfe9adfe5b1ccd8001a7420efb50d6fa7326ef14af91") version("4.5.3", sha256="b6965f9198446a502cde48fb0e02236e75fa5700b94c7306fc36599d57b563f4") + depends_on("c", type="build") # generated + depends_on("cxx", type="build") # generated + depends_on("fortran", type="build") # generated + variant( "pic", default=True, @@ -65,6 +74,7 @@ class SuiteSparse(Package): depends_on("gmp", when="@5.8.0:") depends_on("m4", type="build", when="@5.0.0:") depends_on("cmake", when="+graphblas @5.2.0:", type="build") + depends_on("cmake@3.22:", when="@6:", type="build") depends_on("metis@5.1.0", when="@4.5.1:") with when("+tbb"): @@ -74,14 +84,13 @@ class SuiteSparse(Package): # related stuff (which have long been deprecated). This appears to be # rather problematic for suite-sparse (see e.g. # https://github.com/DrTimothyAldenDavis/SuiteSparse/blob/master/SPQR/Source/spqr_parallel.cpp) - depends_on("intel-tbb@:2020 build_system=makefile", when="^intel-tbb") + depends_on("intel-tbb@:2020 build_system=makefile", when="^[virtuals=tbb] intel-tbb") conflicts( "^intel-oneapi-tbb@2021:", msg="suite-sparse needs task_scheduler_init.h dropped in recent tbb libs", ) - # This patch removes unsupported flags for pgi compiler - patch("pgi.patch", when="%pgi") + # This patch removes unsupported flags for nvhpc compiler patch("pgi.patch", when="%nvhpc") # This patch adds '-lm' when linking libgraphblas and when using clang. @@ -117,36 +126,48 @@ class SuiteSparse(Package): return symbols = ( - "dtrsv_", - "dgemv_", - "dtrsm_", + "cgemm_", + "cgemv_", + "cherk_", + "cpotrf_", + "ctrsm_", + "ctrsv_", "dgemm_", - "dsyrk_", + "dgemv_", "dger_", - "dscal_", - "dpotrf_", - "ztrsv_", - "zgemv_", - "ztrsm_", - "zgemm_", - "zherk_", - "zgeru_", - "zscal_", - "zpotrf_", - "dnrm2_", "dlarf_", + "dlarfb_", "dlarfg_", "dlarft_", - "dlarfb_", + "dnrm2_", + "dpotrf_", + "dscal_", + "dsyrk_", + "dtrsm_", + "dtrsv_", "dznrm2_", + "sgemm_", + "sgemv_", + "spotrf_", + "ssyrk_", + "strsm_", + "strsv_", + "zgemm_", + "zgemv_", + "zgeru_", + "zherk_", "zlarf_", + "zlarfb_", "zlarfg_", "zlarft_", - "zlarfb_", + "zpotrf_", + "zscal_", + "ztrsm_", + "ztrsv_", ) for symbol in symbols: - args.append("CFLAGS+=-D{0}={1}{2}".format(symbol, symbol, suffix)) + args.append(f"CFLAGS+=-D{symbol}={symbol}{suffix}") def install(self, spec, prefix): # The build system of SuiteSparse is quite old-fashioned. @@ -168,23 +189,24 @@ class SuiteSparse(Package): # completely disabled. See # [SuiteSparse/SuiteSparse_config/SuiteSparse_config.mk] for more. "CUDA=no", - "CUDA_PATH=%s" % (spec["cuda"].prefix if "+cuda" in spec else ""), - "CFOPENMP=%s" % (self.compiler.openmp_flag if "+openmp" in spec else ""), - "CFLAGS=-O3 %s" % cc_pic_flag, + f"CUDA_PATH={spec['cuda'].prefix if '+cuda' in spec else ''}", + f"CFOPENMP={self.compiler.openmp_flag if '+openmp' in spec else ''}", + f"CFLAGS=-O3 {cc_pic_flag}", # Both FFLAGS and F77FLAGS are used in SuiteSparse makefiles; # FFLAGS is used in CHOLMOD, F77FLAGS is used in AMD and UMFPACK. - "FFLAGS=%s" % f77_pic_flag, - "F77FLAGS=%s" % f77_pic_flag, + f"FFLAGS={f77_pic_flag}", + f"F77FLAGS={f77_pic_flag}", # use Spack's metis in CHOLMOD/Partition module, # otherwise internal Metis will be compiled - "MY_METIS_LIB=%s" % spec["metis"].libs.ld_flags, - "MY_METIS_INC=%s" % spec["metis"].prefix.include, + f"MY_METIS_LIB={spec['metis'].libs.ld_flags}", + f"MY_METIS_INC={spec['metis'].prefix.include}", # Make sure Spack's Blas/Lapack is used. Otherwise System's # Blas/Lapack might be picked up. Need to add -lstdc++, following # with the TCOV path of SparseSuite 4.5.1's Suitesparse_config.mk, # even though this fix is ugly - "BLAS=%s" % (spec["blas"].libs.ld_flags + (" -lstdc++" if "@4.5.1" in spec else "")), - "LAPACK=%s" % spec["lapack"].libs.ld_flags, + f"BLAS={spec['blas'].libs.ld_flags + (' -lstdc++' if '@4.5.1' in spec else '')}", + f"LAPACK={spec['lapack'].libs.ld_flags}", + f"JOBS={make_jobs}", ] # Recent versions require c11 but some demos do not get the c11 from @@ -193,7 +215,7 @@ class SuiteSparse(Package): # not an issue because c11 or newer is their default. However, for some # compilers (e.g. xlc) the c11 flag is necessary. if spec.satisfies("@5.4:5.7.1") and ("%xl" in spec or "%xl_r" in spec): - make_args += ["CFLAGS+=%s" % self.compiler.c11_flag] + make_args += [f"CFLAGS+={self.compiler.c11_flag}"] # 64bit blas in UMFPACK: if ( @@ -211,29 +233,59 @@ class SuiteSparse(Package): # optimizations if any([x in spec for x in ("%apple-clang", "%clang", "%gcc", "%intel", "%fj")]): make_args += ["CFLAGS+=-fno-common -fexceptions"] - elif "%pgi" in spec: - make_args += ["CFLAGS+=--exceptions"] if spack_f77.endswith("xlf") or spack_f77.endswith("xlf_r"): make_args += ["CFLAGS+=-DBLAS_NO_UNDERSCORE"] # Intel TBB in SuiteSparseQR if "+tbb" in spec: - make_args += ["SPQR_CONFIG=-DHAVE_TBB", "TBB=%s" % spec["tbb"].libs.ld_flags] + make_args += ["SPQR_CONFIG=-DHAVE_TBB", f"TBB={spec['tbb'].libs.ld_flags}"] if "@5.3:" in spec: # Without CMAKE_LIBRARY_PATH defined, the CMake file in the # Mongoose directory finds libsuitesparseconfig.so in system # directories like /usr/lib. - make_args += [ - "CMAKE_OPTIONS=-DCMAKE_INSTALL_PREFIX=%s" % prefix - + " -DCMAKE_LIBRARY_PATH=%s" % prefix.lib + cmake_args = [ + "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON", + f"-DCMAKE_INSTALL_PREFIX={prefix}", + f"-DCMAKE_LIBRARY_PATH={prefix.lib}", + f"-DBLAS_ROOT={spec['blas'].prefix}", + f"-DLAPACK_ROOT={spec['lapack'].prefix}", + # *_LIBRARIES is critical to pick up static + # libraries (if intended) and also to avoid + # unintentional system blas/lapack packages + f'-DBLAS_LIBRARIES="{";".join(spec["blas"].libs)}"', + f'-DLAPACK_LIBRARIES="{";".join(spec["lapack"].libs)}"', + "-DCMAKE_VERBOSE_MAKEFILE=ON", ] + if spec.satisfies("@:7.3"): + cmake_args += [ + f"-DNOPENMP={'OFF' if '+openmp' in spec else 'ON'}", + f"-DENABLE_CUDA={'ON' if '+cuda' in spec else 'OFF'}", + ] + else: + cmake_args += [ + f"-DSUITESPARSE_USE_OPENMP={'ON' if '+openmp' in spec else 'OFF'}", + f"-DSUITESPARSE_USE_CUDA={'ON' if '+cuda' in spec else 'OFF'}", + ] + make_args += [f"CMAKE_OPTIONS={' '.join(cmake_args)}"] if spec.satisfies("%gcc platform=darwin"): make_args += ["LDLIBS=-lm"] - make_args.append("INSTALL=%s" % prefix) + if "%cce" in spec: + # Assume the proper Cray CCE module (cce) is loaded: + craylibs_var = "CRAYLIBS_" + str(spec.target.family).upper() + craylibs_path = env.get(craylibs_var, None) + if not craylibs_path: + raise InstallError( + f"The environment variable {craylibs_var} is not defined.\n" + "\tMake sure the 'cce' module is in the compiler spec." + ) + env.setdefault("LDFLAGS", "") + env["LDFLAGS"] += " -Wl,-rpath," + craylibs_path + + make_args.append(f"INSTALL={prefix}") # Filter the targets we're interested in targets = [ @@ -255,15 +307,28 @@ class SuiteSparse(Package): targets.extend(["SPQR"]) if spec.satisfies("+graphblas"): targets.append("GraphBLAS") - if spec.satisfies("@5.8.0:"): + if spec.satisfies("@5.8.0:6"): targets.append("SLIP_LU") # Finally make and install - make("-C", "SuiteSparse_config", "config", *make_args) + if spec.satisfies("@6:"): + make("-C", "SuiteSparse_config", *make_args) + else: + make("-C", "SuiteSparse_config", "config", *make_args) for target in targets: make("-C", target, "library", *make_args) make("-C", target, "install", *make_args) + # Starting with v7.4.0 headers are installed in a subdirectory called + # 'suitesparse' by default. For backward compatibility, after + # installation, we create links for all files from 'suitesparse' in the + # containing directory, '<prefix>/include': + if spec.satisfies("@7.4:"): + with working_dir(prefix.include): + for f in find("suitesparse", "*", recursive=False): + sf = os.path.basename(f) + symlink(join_path("suitesparse", sf), sf) + @run_after("install") def fix_darwin_install(self): # The shared libraries are not installed correctly on Darwin: @@ -296,5 +361,10 @@ class SuiteSparse(Package): query_parameters = self.spec.last_query.extra_parameters comps = all_comps if not query_parameters else query_parameters return find_libraries( - ["lib" + c for c in comps], root=self.prefix.lib, shared=True, recursive=False + # Libraries may be installed under both `lib/` and `lib64/`, + # don't force searching under `lib/` only. + ["lib" + c for c in comps], + root=self.prefix, + shared=True, + recursive=True, ) |