diff options
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/ea-utils/package.py | 38 |
1 files changed, 30 insertions, 8 deletions
diff --git a/var/spack/repos/builtin/packages/ea-utils/package.py b/var/spack/repos/builtin/packages/ea-utils/package.py index 65e7d3a491..1e586590be 100644 --- a/var/spack/repos/builtin/packages/ea-utils/package.py +++ b/var/spack/repos/builtin/packages/ea-utils/package.py @@ -3,6 +3,8 @@ # # SPDX-License-Identifier: (Apache-2.0 OR MIT) +import os + from spack import * @@ -13,20 +15,40 @@ class EaUtils(MakefilePackage): homepage = "https://expressionanalysis.github.io/ea-utils/" url = "https://github.com/ExpressionAnalysis/ea-utils/archive/1.04.807.tar.gz" + git = "https://github.com/ExpressionAnalysis/ea-utils.git" + maintainers = ['snehring'] - version('1.04.807', sha256='aa09d25e6aa7ae71d2ce4198a98e58d563f151f8ff248e4602fa437f12b8d05f') + version('2021-10-20', commit='10c21926a4dce4289d5052acfd73b8e744d4fede') + version('1.04.807', sha256='aa09d25e6aa7ae71d2ce4198a98e58d563f151f8ff248e4602fa437f12b8d05f', + deprecated=True) - depends_on('subversion') + depends_on('sparsehash') depends_on('zlib') depends_on('gsl') depends_on('bamtools') - # perl module required for make check, which is included in the default - # target - depends_on('perl', type='build') + depends_on('perl', type=['build', 'run']) build_directory = 'clipper' def edit(self, spec, prefix): - with working_dir('clipper'): - makefile = FileFilter('Makefile') - makefile.filter('/usr', prefix) + with working_dir(self.build_directory): + filter_file('/usr', prefix, 'Makefile') + # remove tests from all rule + filter_file(r'^all:.*$', 'all: $(BIN)', 'Makefile') + # remove the vendored sparsehash + filter_file(' sparsehash', '', 'Makefile') + # replace system perl references + for f in next(os.walk(os.getcwd()))[2]: + filter_file('/usr/bin/perl', spec['perl'].prefix.bin.perl, f) + # fix up test script require path + tests = ['join.t', 'mcf.t', 'multx.t'] + rep = 'require "{0}";'.format(os.path.join(os.getcwd(), + 't', 'test-prep.pl')) + for f in tests: + filter_file(r'^require.*$', rep, os.path.join(os.getcwd(), + 't', f)) + + def flag_handler(self, name, flags): + if name.lower() == 'cxxflags': + flags.append(self.compiler.cxx11_flag) + return (flags, None, None) |