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-rw-r--r--var/spack/repos/builtin/packages/hybrid-lambda/package.py39
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diff --git a/var/spack/repos/builtin/packages/hybrid-lambda/package.py b/var/spack/repos/builtin/packages/hybrid-lambda/package.py
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+# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class HybridLambda(AutotoolsPackage):
+ """Hybrid-Lambda is a software package that can simulate gene trees
+ within a rooted species network or a rooted species tree under the
+ coalescent process.
+
+ The main feature of this program is that users can
+ choose to use the standard Kingman coalescent process, which produces
+ bifurcating genealogies, or two other Lambda coalescent processes,
+ which produce multifurcating genealogies. The other feature is that
+ hybrid sim uses extended Newick formatted strings to make it easier to
+ represent hybridization events between species."""
+
+ homepage = "https://github.com/hybridLambda/hybrid-Lambda"
+ git = "https://github.com/hybridLambda/hybrid-Lambda.git"
+
+ version('develop', submodules=True)
+
+ depends_on('autoconf', type='build')
+ depends_on('automake', type='build')
+ depends_on('libtool', type='build')
+ depends_on('m4', type='build')
+ depends_on('boost')
+ depends_on('cppunit', type='test')
+
+ build_directory = 'src'
+
+ @run_after('configure')
+ def change_install_option_in_makefile(self):
+ with working_dir('src'):
+ filter_file(r'INSTALL = /bin/install -c',
+ 'INSTALL = /bin/install -C', 'Makefile')