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# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class AllpathsLg(AutotoolsPackage):
"""ALLPATHS-LG is our original short read assembler and it works on both
small and large (mammalian size) genomes."""
homepage = "https://www.broadinstitute.org/software/allpaths-lg/blog/"
url = "ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz"
version("52488", sha256="035b49cb21b871a6b111976757d7aee9c2513dd51af04678f33375e620998542")
# compiles with gcc 4.7.0 to 4.9.4)
conflicts("%gcc@:4.6.4,5.1.0:")
conflicts("%cce")
conflicts("%apple-clang")
conflicts("%clang")
conflicts("%intel")
conflicts("%nag")
conflicts("%pgi")
conflicts("%xl")
conflicts("%xl_r")
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