blob: 3ec1e994183975026fcd08d3429bf8fe21935003 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class AllpathsLg(AutotoolsPackage):
"""ALLPATHS-LG is our original short read assembler and it works on both
small and large (mammalian size) genomes."""
homepage = "http://www.broadinstitute.org/software/allpaths-lg/blog/"
url = "ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/LATEST_VERSION.tar.gz"
version('52488', 'bde9008e236d87708a48eb83af6d6d5b')
# compiles with gcc 4.7.0 to 4.9.4)
conflicts('%gcc@:4.6.4,5.1.0:')
conflicts('%cce')
conflicts('%clang')
conflicts('%intel')
conflicts('%nag')
conflicts('%pgi')
conflicts('%xl')
conflicts('%xl_r')
|