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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
import os
import tarfile
class Avizo(Package):
"""Avizo is a 3D analysis software for scientific and industrial data.
Wherever three-dimensional imaging data sets need to be processed, in
materials science, geosciences or engineering applications, Avizo offers
abundant state-of-the-art image data processing, exploration and analysis
features within an intuitive workflow and easy-to-use graphical user
interface."""
homepage = "https://www.thermofisher.com/sa/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software.html"
manual_download = True
version('2020.1',
sha256='9321aaa276567eebf116e268353c33a4c930d768d22793f921338e1d8cefe991',
url="file://{0}/Avizo-20201-Linux64-gcc48.bin".format(os.getcwd()),
expand=False)
version('2019.4',
sha256='a637720535bcbe254ab56368004a9544c64ec36186373fa24f26cee279685248',
url="file://{0}/Avizo-20194-Linux64-gcc48.bin".format(os.getcwd()),
expand=False)
version('2019.3',
sha256='be109df81e2f7238f234862367841dae05e76cc62218c1f36b1d9bc9514ce5f7',
url="file://{0}/Avizo-20193-Linux64-gcc48.bin".format(os.getcwd()),
expand=False)
version('9.7.0',
sha256='9c9b9e81957387f4218df0c5adbb80717e9ae80ab3ca6ff8da523f7f499dcc5b',
url="file://{0}/Avizo-970-Linux64-gcc44.bin".format(os.getcwd()),
expand=False)
gcc_ver = {
"9.7.0": "44",
"2019.3": "48",
"2019.4": "48",
"2020.1": "48"
}
install_dir = {
"9.7.0": 'Avizo-9.7.0',
"2019.3": join_path('..', 'Avizo'),
"2019.4": join_path('..', 'Avizo'),
"2020.1": join_path('..', 'Avizo')
}
# Licensing
license_required = True
license_comment = '#'
license_files = ['share/license/password.dat']
license_vars = ['MCSLMD_LICENSE_FILE']
def setup_run_environment(self, env):
env.set('MCSLMD_LICENSE_FILE', join_path(self.prefix.share.license,
'password.dat'))
def install(self, spec, prefix):
ver = self.version.joined
sh = which('sh')
sh('Avizo-{0}-Linux64-gcc{1}.bin'
.format(ver, self.gcc_ver[self.version.string]),
'--noexec', '--keep')
with working_dir('Avizo'):
avizo_tar = tarfile.open(name='Avizo-{0}-Linux64-gcc{1}.tar.bz2'
.format(self.version, self.gcc_ver
[self.version.string]))
avizo_tar.extractall()
with working_dir(self.install_dir[self.version.string]):
install_tree('bin', prefix.bin)
install_tree('lib', prefix.lib)
install_tree('data', prefix.data)
install_tree('share', prefix.share)
install_tree('python', prefix.python)
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