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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Bamaddrg(MakefilePackage):
"""bamaddrg adds read groups to input BAM files,
streams BAM output on stdout"""
homepage = "https://github.com/ekg/bamaddrg"
url = "https://github.com/ilbiondo/bamaddrg/archive/v0.1.tar.gz"
git = "https://github.com/ilbiondo/bamaddrg.git"
version("0.1", sha256="725a689d8326d72f865837b231005a9211d6c70a25b7a3a754df4f90d2996355")
depends_on("bamtools", type="build")
def setup_build_environment(self, env):
env.set("BAMTOOLS_ROOT", self.spec["bamtools"].prefix)
env.set("PREFIX", self.prefix)
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