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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class FastxToolkit(AutotoolsPackage):
"""The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing."""
homepage = "http://hannonlab.cshl.edu/fastx_toolkit/"
url = "https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2"
license("AGPL-3.0-only")
version("0.0.14", sha256="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806")
depends_on("libgtextutils")
# patch implicit fallthrough
patch("pr-22.patch")
# fix error [-Werror,-Wpragma-pack]
patch("fix_pragma_pack.patch", when="%fj")
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