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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Fqtrim(MakefilePackage):
"""fqtrim is a versatile stand-alone utility that can be used to trim
adapters, poly-A tails, terminal unknown bases (Ns) and low quality 3'
regions in reads from high-throughput next-generation sequencing
machines."""
homepage = "https://ccb.jhu.edu/software/fqtrim/"
url = "https://ccb.jhu.edu/software/fqtrim/dl/fqtrim-0.9.7.tar.gz"
version("0.9.7", sha256="4951538f69dde14a23fc4841ff020434d26eb9622c4e06b43c068c702aa3d0d6")
def build(self, spec, prefix):
make("release")
def install(self, spec, prefix):
mkdirp(prefix.bin)
install("fqtrim", prefix.bin)
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