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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Htslib(AutotoolsPackage):
"""C library for high-throughput sequencing data formats."""
homepage = "https://github.com/samtools/htslib"
version('1.9', '2ac92c9c3eef9986345ac69a05dd4d24')
version('1.8', '54e9b3a04251fa59b1878f6b546b5c79')
version('1.7', 'd3cc7e080a9a8c4161d8f62b56d3b98d')
version('1.6', 'd6fd14e208aca7e08cbe9072233d0af9')
version('1.5', sha256='a02b515ea51d86352b089c63d778fb5e8b9d784937cf157e587189cb97ad922d')
version('1.4', '2a22ff382654c033c40e4ec3ea880050')
version('1.3.1', '16d78f90b72f29971b042e8da8be6843')
version('1.2', '64026d659c3b062cfb6ddc8a38e9779f')
depends_on('zlib')
depends_on('bzip2', when="@1.4:")
depends_on('xz', when="@1.4:")
depends_on('m4', when="@1.2")
depends_on('autoconf', when="@1.2")
depends_on('automake', when="@1.2")
depends_on('libtool', when="@1.2")
# v1.2 uses the automagically assembled tarball from .../archive/...
# everything else uses the tarballs uploaded to the release
def url_for_version(self, version):
if version.string == '1.2':
return 'https://github.com/samtools/htslib/archive/1.2.tar.gz'
else:
url = "https://github.com/samtools/htslib/releases/download/{0}/htslib-{0}.tar.bz2"
return url.format(version.dotted)
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