blob: 71f316db949860477ae0b70962b8191f9ad86cf0 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class LumpySv(MakefilePackage):
"""A probabilistic framework for structural variant discovery."""
homepage = "https://github.com/arq5x/lumpy-sv"
url = "https://github.com/arq5x/lumpy-sv/archive/0.2.13.tar.gz"
license("MIT")
version("0.2.13", sha256="3672b86ef0190ebe520648a6140077ee9f15b0549cb233dca18036e63bbf6375")
depends_on("htslib")
def edit(self, spec, prefix):
makefile = FileFilter("Makefile")
makefile.filter("export CXX .*", "")
def install(self, spec, prefix):
install_tree("bin", prefix.bin)
|
