blob: 09174e79fdca28a4340dae995b6c276ac2956816 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
|
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Mpest(MakefilePackage):
"""MP-EST estimates species trees from a set of gene trees by maximizing
a pseudo-likelihood function."""
homepage = "http://faculty.franklin.uga.edu/lliu/content/mp-est"
url = "https://faculty.franklin.uga.edu/lliu/sites/faculty.franklin.uga.edu.lliu/files/mpest_1.5.zip"
version('1.5', 'f176d5301aa26567918664e5e30027d1')
@property
def build_directory(self):
return join_path('mpest_{0}'.format(self.version), 'src')
def install(self, spec, prefix):
with working_dir(self.build_directory):
mkdirp(prefix.bin)
install('mpest', prefix.bin)
def setup_environment(self, spack_env, run_env):
if self.spec.satisfies('platform=darwin'):
spack_env.set('ARCHITECTURE', 'mac')
else:
spack_env.set('ARCHITECTURE', 'unix')
|
