blob: 195e9c02e0f28f119a95940f509eb693a4f71fa0 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
|
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Orthomcl(Package):
"""OrthoMCL is a genome-scale algorithm for grouping orthologous protein
sequences."""
homepage = "https://orthomcl.org/orthomcl/"
url = "https://orthomcl.org/common/downloads/software/v2.0/orthomclSoftware-v2.0.9.tar.gz"
version("2.0.9", sha256="5f96d23ff255778535c4926d75b19f059db0c01be1ac599289d2431115d68640")
depends_on("perl", type=("build", "run"))
depends_on("blast-plus")
depends_on("mcl")
depends_on("mariadb")
def install(self, spec, prefix):
install_tree("bin", prefix.bin)
install_tree("config", prefix.config)
install_tree("doc", prefix.doc)
install_tree("lib", prefix.lib)
def setup_run_environment(self, env):
env.prepend_path("PERL5LIB", self.prefix.lib)
|
