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# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Parsimonator(MakefilePackage):
"""Parsimonator is a no-frills light-weight implementation for building
starting trees under parsimony for RAxML.
"""
homepage = "http://www.exelixis-lab.org/"
git = "https://github.com/stamatak/Parsimonator-1.0.2.git"
version("1.0.2", commit="78368c6ab1e9adc7e9c6ec9256dd7ff2a5bb1b0a")
patch("nox86.patch")
@property
def makefile_file(self):
if self.spec.target.family != "x86_64":
return "Makefile.nosse"
if "avx" in self.spec.target:
return "Makefile.AVX.gcc"
elif "sse3" in self.spec.target:
return "Makefile.SSE3.gcc"
return "Makefile.gcc"
def edit(self, spec, prefix):
makefile = FileFilter(self.makefile_file)
makefile.filter("CC = gcc", "CC = %s" % spack_cc)
def build(self, spec, prefix):
make("-f", self.makefile_file)
def install(self, spec, prefix):
mkdirp(prefix.bin)
if "avx" in self.spec.target:
install("parsimonator-AVX", prefix.bin)
elif "sse3" in self.spec.target:
install("parsimonator-SSE3", prefix.bin)
else:
install("parsimonator", prefix.bin)
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