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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Pflotran(AutotoolsPackage):
"""PFLOTRAN is an open source, state-of-the-art massively parallel
subsurface flow and reactive transport code.
"""
homepage = "https://www.pflotran.org"
git = "https://bitbucket.org/pflotran/pflotran.git"
maintainers("ghammond86", "balay")
license("LGPL-3.0-only")
version("develop")
version("5.0.0", commit="f0fe931c72c03580e489724afeb8c5451406b942") # tag v5.0.0
version("4.0.1", commit="fd351a49b687e27f46eae92e9259156eea74897d") # tag v4.0.1
version("3.0.2", commit="9e07f416a66b0ad304c720b61aa41cba9a0929d5") # tag v3.0.2
version("xsdk-0.6.0", commit="46e14355c1827c057f2e1b3e3ae934119ab023b2")
version("xsdk-0.5.0", commit="98a959c591b72f73373febf5f9735d2c523b4c20")
version("xsdk-0.4.0", commit="c851cbc94fc56a32cfdb0678f3c24b9936a5584e")
version("xsdk-0.3.0", branch="release/xsdk-0.3.0")
variant("rxn", default=False, description="Use inbuilt reaction code, useful with cray ftn")
depends_on("mpi")
depends_on("hdf5@1.8.12:+mpi+fortran+hl")
depends_on("petsc@main:+hdf5+metis", when="@develop")
depends_on("petsc@3.20:+hdf5+metis", when="@5.0.0")
depends_on("petsc@3.18:+hdf5+metis", when="@4.0.1")
depends_on("petsc@3.16:+hdf5+metis", when="@3.0.2")
depends_on("petsc@3.14:+hdf5+metis", when="@xsdk-0.6.0")
depends_on("petsc@3.12:+hdf5+metis", when="@xsdk-0.5.0")
depends_on("petsc@3.10:+hdf5+metis", when="@xsdk-0.4.0")
depends_on("petsc@3.8.0:+hdf5+metis", when="@xsdk-0.3.0")
# https://github.com/spack/spack/pull/37579#issuecomment-1545998141
conflicts("^hdf5@1.14.1", when="%oneapi")
def build(self, spec, prefix):
if spec.satisfies("+rxn"):
with working_dir("src/pflotran"):
make("pflotran_rxn")
else:
make("all")
@property
def parallel(self):
return self.spec.satisfies("@xsdk-0.4.0:")
def flag_handler(self, name, flags):
if "%gcc@10:" in self.spec and name == "fflags":
flags.append("-fallow-argument-mismatch")
return flags, None, None
@when("@5.0.0")
def patch(self):
filter_file(
"use iso_[cC]_binding", "use, intrinsic :: iso_c_binding", "src/pflotran/hdf5_aux.F90"
)
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