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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyNibetaseries(PythonPackage):
"""BetaSeries Correlations implemented in Nipype."""
homepage = "https://github.com/HBClab/NiBetaSeries"
pypi = "nibetaseries/nibetaseries-0.6.0.tar.gz"
git = "https://github.com/HBClab/NiBetaSeries.git"
license("MIT")
version("master", branch="master")
depends_on("python@3.5:", type=("build", "run"))
depends_on("py-setuptools@40.8:", type="build")
depends_on("py-cython", type="build")
with when("@master"):
depends_on("py-nipype@1.5.1:", type=("build", "run"))
depends_on("py-pybids@0.11.1:", type=("build", "run"))
depends_on("py-nibabel@3:", type=("build", "run"))
depends_on("py-nistats@0.0.1b2", type=("build", "run"))
depends_on("py-niworkflows@1.3.1:1.3", type=("build", "run"))
depends_on("py-nilearn", type=("build", "run"))
depends_on("py-pandas", type=("build", "run"))
depends_on("py-numpy", type=("build", "run"))
depends_on("py-duecredit", type=("build", "run"))
depends_on("py-scikit-learn@0.22.0:0.22", type=("build", "run"))
depends_on("py-matplotlib", type=("build", "run"))
depends_on("py-mne", type=("build", "run"))
# pypiwin32; platform_system=="Windows"
@run_after("install")
def patch_bin(self):
# pkg_resources fails to find the dependencies, resulting in errors
# like: pkg_resources.DistributionNotFound: The 'sklearn' distribution
# was not found and is required by nilearn
filter_file(
"__requires__ = 'nibetaseries==0.post1+gaa7d2ea'",
"",
join_path(self.prefix.bin, "nibs"),
string=True,
)
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