1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
|
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyQuast(PythonPackage):
"""Quality Assessment Tool for Genome Assemblies"""
homepage = "https://cab.spbu.ru/software/quast"
url = "https://github.com/ablab/quast/archive/quast_4.6.1.tar.gz"
version('4.6.3', sha256='d7f5e670563d17d683f6df057086f7b816b6a088266c6270f7114a1406aaab63')
version('4.6.1', sha256='a8071188545710e5c0806eac612daaabde9f730819df2c44be3ffa9317b76a58')
version('4.6.0', sha256='6bee86654b457a981718a19acacffca6a3e74f30997ad06162a70fd2a181ca2e')
depends_on('boost@1.56.0')
depends_on('perl@5.6.0:')
depends_on('python@2.5:,3.3:')
depends_on('py-setuptools', type='build')
depends_on('py-matplotlib', type=('build', 'run'))
depends_on('java', type=('build', 'run'))
depends_on('perl-time-hires', type=('build', 'run'))
depends_on('gnuplot', type=('build', 'run'))
depends_on('mummer', type=('build', 'run'))
depends_on('bedtools2', type=('build', 'run'))
depends_on('bwa', type=('build', 'run'))
depends_on('glimmer', type=('build', 'run'))
|
