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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyRnacocktail(PythonPackage):
"""RNACocktail: A comprehensive framework
for accurate and efficient RNA-Seq analysis."""
homepage = "http://bioinform.github.io/rnacocktail/"
url = "https://github.com/bioinform/rnacocktail/archive/v0.2.2.tar.gz"
version('0.2.2', sha256='34aa0d1d7bd9d80303fe7dac5acc0519f7c1ed986397692588343d82ce45c7a5')
depends_on('python@2.7:2.8', type=('build', 'run'))
depends_on('py-setuptools', type='build')
depends_on('py-pybedtools', type=('build', 'run'))
depends_on('py-pysam', type=('build', 'run'))
# Higher version of py-pandas and py-numpy
# depends on python@3: which conflicts with py-rnacocktail
depends_on('py-pandas@:0.24.2', type=('build', 'run'))
depends_on('py-numpy@:1.16.5', type=('build', 'run'))
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