1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyScanpy(PythonPackage):
"""Scanpy is a scalable toolkit for analyzing single-cell
gene expression data built jointly with anndata."""
homepage = "https://scanpy.readthedocs.io/en/stable/"
pypi = "scanpy/scanpy-1.9.1.tar.gz"
license("BSD-3-Clause")
version("1.9.1", sha256="00c9a83b649da7e0171c91e9a08cff632102faa760614fd05cd4d1dbba4eb541")
depends_on("python@3.7:", type=("build", "run"))
depends_on("py-setuptools-scm", type="build")
depends_on("py-flit-core@3.4:3", type="build")
depends_on("py-importlib-metadata@0.7:", type=("build", "run"), when="^python@:3.7")
depends_on("py-tomli", type="build")
depends_on("py-packaging", type=("build", "run"))
depends_on("py-anndata@0.7.4:", type=("build", "run"))
depends_on("py-numpy@1.17.0:", type=("build", "run"))
depends_on("py-matplotlib@3.4:", type=("build", "run"))
depends_on("py-pandas@1.0:", type=("build", "run"))
depends_on("py-scipy@1.4:", type=("build", "run"))
depends_on("py-seaborn", type=("build", "run"))
depends_on("py-h5py@3:", type=("build", "run"))
depends_on("py-tqdm", type=("build", "run"))
depends_on("py-scikit-learn@0.22:", type=("build", "run"))
depends_on("py-statsmodels@0.10.0:", type=("build", "run"))
depends_on("py-patsy", type=("build", "run"))
depends_on("py-networkx@2.3:", type=("build", "run"))
depends_on("py-natsort", type=("build", "run"))
depends_on("py-joblib", type=("build", "run"))
depends_on("py-numba@0.41.0:", type=("build", "run"))
depends_on("py-umap-learn@0.3.10:", type=("build", "run"))
depends_on("py-session-info", type=("build", "run"))
|
