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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RAbsseq(RPackage):
"""Inferring differential expression genes by absolute counts
difference between two groups, utilizing Negative binomial
distribution and moderating fold-change according to heterogeneity
of dispersion across expression level."""
homepage = "https://www.bioconductor.org/packages/ABSSeq/"
git = "https://git.bioconductor.org/packages/ABSSeq.git"
version('1.22.8', commit='a67ba49bc156a4522092519644f3ec83d58ebd6a')
depends_on('r@3.4.0:3.4.9', when='@1.22.8')
depends_on('r-locfit', type=('build', 'run'))
depends_on('r-limma', type=('build', 'run'))
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