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# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RAffyrnadegradation(RPackage):
"""The package helps with the assessment and correction of
RNA degradation effects in Affymetrix 3' expression arrays.
The parameter d gives a robust and accurate measure of RNA
integrity. The correction removes the probe positional bias,
and thus improves comparability of samples that are affected
by RNA degradation."""
homepage = "https://www.bioconductor.org/packages/AffyRNADegradation/"
git = "https://git.bioconductor.org/packages/AffyRNADegradation.git"
version('1.22.0', commit='0fa78f8286494711a239ded0ba587b0de47c15d3')
depends_on('r@3.4.0:3.4.9', when='@1.22.0')
depends_on('r-affy', type=('build', 'run'))
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