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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack.package import *


class RGenefilter(RPackage):
    """Methods for filtering genes from high-throughput experiments.

    Some basic functions for filtering genes."""

    bioc = "genefilter"

    version('1.76.0', commit='8d630fd25f0d2a4101e05e123c3959591203a7ea')
    version('1.72.1', commit='b01b00a766982ef7d80b90a252085c8c4f085e1b')
    version('1.72.0', commit='8cb0b2e73531a417d53e5625bcf436265cdbe101')
    version('1.66.0', commit='1c4c471ccca873bf92dcf0b50f611eaa64c4f0cf')
    version('1.64.0', commit='82e91b7751bae997b9c898c219ea201fd02a8512')
    version('1.62.0', commit='eb119894f015c759f93f458af7733bdb770a22ad')
    version('1.60.0', commit='c98f695253c330a9380b2b4ffa27f3b7d66773e4')
    version('1.58.1', commit='ace2556049677f60882adfe91f8cc96791556fc2')

    depends_on('r-biocgenerics@0.31.2:', type=('build', 'run'), when='@1.68.0:')
    depends_on('r-annotationdbi', type=('build', 'run'))
    depends_on('r-annotate', type=('build', 'run'))
    depends_on('r-biobase', type=('build', 'run'))
    depends_on('r-survival', type=('build', 'run'))

    depends_on('r-s4vectors@0.9.42:', type=('build', 'run'), when='@:1.66.0')