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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RIlluminahumanmethylation450kannoIlmn12Hg19(RPackage):
"""Annotation for Illumina's 450k methylation arrays.
Manifests and annotation for Illumina's 450k array data."""
# This package is available via bioconductor but there is no available git
# repository.
bioc = "IlluminaHumanMethylation450kanno.ilmn12.hg19"
url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz"
version(
"0.6.1",
url="https://bioconductor.org/packages/3.15/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.1.tar.gz",
sha256="3627d75a6303f4d307fa6daf0c5afd57649c60a268b3d4be7e8ac8edc4b1e288",
)
version(
"0.6.0",
url="https://bioconductor.org/packages/3.4/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz",
sha256="249b8fd62add3c95b5047b597cff0868d26a98862a47cebd656edcd175a73b15",
)
depends_on("r@3.3.0:", type=("build", "run"))
depends_on("r@3.5.0:", type=("build", "run"), when="@0.6.1:")
depends_on("r-minfi@1.19.15:", type=("build", "run"))
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