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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RReportingtools(RPackage):
"""Tools for making reports in various formats.
The ReportingTools software package enables users to easily display
reports of analysis results generated from sources such as microarray
and sequencing data. The package allows users to create HTML pages that
may be viewed on a web browser such as Safari, or in other formats
readable by programs such as Excel. Users can generate tables with
sortable and filterable columns, make and display plots, and link table
entries to other data sources such as NCBI or larger plots within the
HTML page. Using the package, users can also produce a table of contents
page to link various reports together for a particular project that can
be viewed in a web browser. For more examples, please visit our site:
http:// research-pub.gene.com/ReportingTools."""
bioc = "ReportingTools"
version("2.40.0", commit="808af36aa9756be8c907a8669726c90dcd02c73c")
version("2.38.0", commit="5c4971eebbaf3577ef20b74bf36c2db4e91561cc")
version("2.36.0", commit="34122d4bde5ce43415f63f2e39e3a088c55282cc")
version("2.34.0", commit="fb5aef0b6e1c6166d0f025d9e6ca60e54c68dbaf")
version("2.30.0", commit="fb9aee416f38cfd308d6d7264ccbcda0467642a7")
version("2.24.0", commit="d114c658affba9b682a37b4e2caf4341cf8da6cf")
version("2.22.1", commit="dce6af6c6a1cddff077fe61368f2c13e5a0e7bab")
version("2.20.0", commit="77e14ae13fdc16654300852dfd94e6cef58009da")
version("2.17.3", commit="b2e379cd5b813d8ccca37ec25f0660deec943622")
version("2.16.0", commit="b1aa0ea302da7f2993ce8087b1d09c11ddf03663")
depends_on("r+X", type=("build", "run"))
depends_on("r-knitr", type=("build", "run"))
depends_on("r-biobase", type=("build", "run"))
depends_on("r-hwriter", type=("build", "run"))
depends_on("r-category", type=("build", "run"))
depends_on("r-gostats", type=("build", "run"))
depends_on("r-limma@3.17.5:", type=("build", "run"))
depends_on("r-lattice", type=("build", "run"))
depends_on("r-annotationdbi", type=("build", "run"))
depends_on("r-edger", type=("build", "run"))
depends_on("r-annotate", type=("build", "run"))
depends_on("r-pfam-db", type=("build", "run"))
depends_on("r-gseabase", type=("build", "run"))
depends_on("r-biocgenerics@0.1.6:", type=("build", "run"))
depends_on("r-xml", type=("build", "run"))
depends_on("r-r-utils", type=("build", "run"))
depends_on("r-deseq2@1.3.41:", type=("build", "run"))
depends_on("r-ggplot2", type=("build", "run"))
depends_on("r-ggbio", type=("build", "run"))
depends_on("r-iranges", type=("build", "run"))
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