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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RSinglecellexperiment(RPackage):
"""S4 Classes for Single Cell Data.
Defines a S4 class for storing data from single-cell experiments. This
includes specialized methods to store and retrieve spike-in information,
dimensionality reduction coordinates and size factors for each cell,
along with the usual metadata for genes and libraries."""
bioc = "SingleCellExperiment"
version('1.16.0', commit='bb27609ba08052607fc08529ffbbbcf1eab265cb')
version('1.12.0', commit='66063b74c8b0bd0fd1277c7ad425ad11823ab356')
version('1.6.0', commit='baa51d77a8dacd2a22e7293095a8cffaaa3293b4')
version('1.4.1', commit='b1efcb338e9176ae6829bb897957aa37e74d4870')
version('1.2.0', commit='fe512259da79e0c660b322b5387e9bb16f2e6321')
version('1.0.0', commit='545e974aa7ca7855e039bf9e3030290cd71d9031')
depends_on('r@3.4:', type=('build', 'run'))
depends_on('r@3.5:', type=('build', 'run'), when='@1.2.0:1.6.0')
depends_on('r-summarizedexperiment', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run'))
depends_on('r-biocgenerics', type=('build', 'run'))
depends_on('r-genomicranges', type=('build', 'run'), when='@1.16.0:')
depends_on('r-delayedarray', type=('build', 'run'), when='@1.16.0:')
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