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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class RTxdbHsapiensUcscHg18Knowngene(RPackage):
"""Annotation package for TxDb object(s).
Exposes an annotation databases generated from UCSC by exposing these as
TxDb objects"""
# This is a bioconductor package but ther is no available git repo
bioc = "TxDb.Hsapiens.UCSC.hg18.knownGene"
url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/TxDb.Hsapiens.UCSC.hg18.knownGene_3.2.2.tar.gz"
version("3.2.2", sha256="bc9ca40b4eab87f5ca64a4b876d42502b9b8e9f5983d745bfe0ee349d97b69fa")
depends_on("r-genomicfeatures@1.21.30:", type=("build", "run"))
depends_on("r-annotationdbi", type=("build", "run"))
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