var/spack/repos/builtin/packages/r-txdb-hsapiens-ucsc-hg18-knowngene/package.py


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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class RTxdbHsapiensUcscHg18Knowngene(RPackage):
    """Annotation package for TxDb object(s)

    Exposes an annotation databases generated from UCSC by exposing these as
    TxDb objects"""

    # This is a bioconductor package but ther is no available git repo
    homepage = "https://bioconductor.org/packages/release/data/annotation/html/TxDb.Hsapiens.UCSC.hg18.knownGene.html"
    url      = "https://bioconductor.org/packages/release/data/annotation/src/contrib/TxDb.Hsapiens.UCSC.hg18.knownGene_3.2.2.tar.gz"

    version('3.2.2', sha256='bc9ca40b4eab87f5ca64a4b876d42502b9b8e9f5983d745bfe0ee349d97b69fa')

    depends_on('r-genomicfeatures@1.21.30:', type=('build', 'run'))
    depends_on('r-annotationdbi', type=('build', 'run'))