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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
from spack.pkg.builtin.boost import Boost
class Sailfish(CMakePackage):
"""Sailfish is a tool for transcript quantification from RNA-seq data."""
homepage = "https://www.cs.cmu.edu/~ckingsf/software/sailfish"
url = "https://github.com/kingsfordgroup/sailfish/archive/v0.10.1.tar.gz"
license("GPL-3.0-only")
version("0.10.1", sha256="a0d6d944382f2e07ffbfd0371132588e2f22bb846ecfc3d3435ff3d81b30d6c6")
depends_on("boost@1.55:")
# TODO: replace this with an explicit list of components of Boost,
# for instance depends_on('boost +filesystem')
# See https://github.com/spack/spack/pull/22303 for reference
depends_on(Boost.with_default_variants)
depends_on("tbb")
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