1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
|
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
from spack.pkg.builtin.boost import Boost
class Samrai(AutotoolsPackage):
"""SAMRAI (Structured Adaptive Mesh Refinement Application Infrastructure)
is an object-oriented C++ software library enables exploration of
numerical, algorithmic, parallel computing, and software issues
associated with applying structured adaptive mesh refinement
(SAMR) technology in large-scale parallel application development.
"""
homepage = "https://computing.llnl.gov/projects/samrai"
url = "https://computing.llnl.gov/projects/samrai/download/SAMRAI-v3.11.2.tar.gz"
list_url = homepage
tags = ["radiuss"]
version("3.12.0", sha256="b8334aa22330a7c858e09e000dfc62abbfa3c449212b4993ec3c4035bed6b832")
version("3.11.5", sha256="6ec1f4cf2735284fe41f74073c4f1be87d92184d79401011411be3c0671bd84c")
version("3.11.4", sha256="fa87f6cc1cb3b3c4856bc3f4d7162b1f9705a200b68a5dc173484f7a71c7ea0a")
# Version 3.11.3 permissions don't allow downloading
version("3.11.2", sha256="fd9518cc9fd8c8f6cdd681484c6eb42114aebf2a6ba4c8e1f12b34a148dfdefb")
version("3.11.1", sha256="14317938e55cb7dc3eca21d9b7667a256a08661c6da988334f7af566a015b327")
version("3.10.0", sha256="8d6958867f7165396459f4556e439065bc2cd2464bcfe16195a2a68345d56ea7")
version("3.9.1", sha256="ce0aa9bcb3accbd39c09dd32cbc9884dc00e7a8d53782ba46b8fe7d7d60fc03f")
version("3.8.0", sha256="0fc811ca83bd72d238f0efb172d466e80e5091db0b78ad00ab6b93331a1fe489")
version("3.7.3", sha256="19eada4f351a821abccac0779fde85e2ad18b931b6a8110510a4c21707c2f5ce")
version("3.7.2", sha256="c20c5b12576b73a1a095d8ef54536c4424517adaf472d55d48e57455eda74f2d")
version(
"3.6.3-beta", sha256="7d9202355a66b8850333484862627f73ea3d7620ca84cde757dee629ebcb61bb"
)
version(
"3.5.2-beta", sha256="9a591fc962edd56ea073abd13d03027bd530f1e61df595fae42dd9a7f8b9cc3a"
)
version(
"3.5.0-beta", sha256="3e10c55d7b652b6feca902ce782751d4b16c8ad9d4dd8b9e2e9ec74dd64f30da"
)
version(
"3.4.1-beta", sha256="5aadc813b75b65485f221372e174a2691e184e380f569129e7aa4484ca4047f8"
)
version(
"3.3.3-beta", sha256="c07b5dc8d56a8f310239d1ec6be31182a6463fea787a0e10b54a3df479979cac"
)
version(
"3.3.2-beta", sha256="430ea1a77083c8990a3c996572ed15663d9b31c0f8b614537bd7065abd6f375f"
)
version("2.4.4", sha256="33242e38e6f4d35bd52f4194bd99a014485b0f3458b268902f69f6c02b35ee5c")
# Debug mode reduces optimization, includes assertions, debug symbols
# and more print statements
variant(
"debug", default=False, description="Compile with reduced optimization and debugging on"
)
variant("silo", default=False, description="Compile with support for silo")
variant("shared", default=False, description="Build shared libraries")
depends_on("mpi")
depends_on("zlib-api")
depends_on("hdf5+mpi")
depends_on("m4", type="build")
depends_on("boost@:1.64.0", when="@3.0.0:3.11", type="build")
# TODO: replace this with an explicit list of components of Boost,
# for instance depends_on('boost +filesystem')
# See https://github.com/spack/spack/pull/22303 for reference
depends_on(Boost.with_default_variants, when="@3.0.0:3.11.99", type="build")
depends_on("silo+mpi", when="+silo")
# don't build SAMRAI 3+ with tools with gcc
patch("no-tool-build.patch", when="@3.0.0:%gcc")
# 2.4.4 needs a lot of patches to fix ADL and performance problems
patch(
"https://github.com/IBAMR/IBAMR/releases/download/v0.3.0/ibamr-samrai-fixes.patch?full_index=1",
sha256="1d088b6cca41377747fa0ae8970440c20cb68988bbc34f9032d5a4e6aceede47",
when="@2.4.4",
)
def configure_args(self):
options = []
options.extend(
[
"--with-CXX=%s" % self.spec["mpi"].mpicxx,
"--with-CC=%s" % self.spec["mpi"].mpicc,
"--with-F77=%s" % self.spec["mpi"].mpifc,
"--with-M4=%s" % self.spec["m4"].prefix,
"--with-hdf5=%s" % self.spec["hdf5"].prefix,
"--with-zlib=%s" % self.spec["zlib-api"].prefix,
"--without-blas",
"--without-lapack",
"--with-hypre=no",
"--with-petsc=no",
]
)
# SAMRAI 2 used templates; enable implicit instantiation
if self.spec.satisfies("@:3"):
options.append("--enable-implicit-template-instantiation")
if "+debug" in self.spec:
options.extend(["--disable-opt", "--enable-debug"])
else:
options.extend(["--enable-opt", "--disable-debug"])
if "+silo" in self.spec:
options.append("--with-silo=%s" % self.spec["silo"].prefix)
if "+shared" in self.spec:
options.append("--enable-shared")
if self.spec.satisfies("@3.0:3.11"):
options.append("--with-boost=%s" % self.spec["boost"].prefix)
return options
def setup_dependent_build_environment(self, env, dependent_spec):
if self.spec.satisfies("@3.12:"):
env.append_flags("CXXFLAGS", self.compiler.cxx11_flag)
|
