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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Steps(CMakePackage):
"""STochastic Engine for Pathway Simulation"""
homepage = "https://groups.oist.jp/cnu/software"
git = "https://github.com/CNS-OIST/STEPS.git"
version("3.3.0", submodules=True)
version("3.2.0", submodules=True)
version("develop", branch="master", submodules=True)
variant("native", default=True, description="Generate non-portable arch-specific code")
variant("lapack", default=False, description="Use new BDSystem/Lapack code for E-Field solver")
variant("petsc", default=False, description="Use PETSc library for parallel E-Field solver")
variant("mpi", default=True, description="Use MPI for parallel solvers")
depends_on("blas")
depends_on("lapack", when="+lapack")
depends_on("mpi", when="+mpi")
depends_on("petsc~debug+int64", when="+petsc")
depends_on("python")
depends_on("py-cython")
patch("for_aarch64.patch", when="target=aarch64:")
def cmake_args(self):
args = []
spec = self.spec
if "+native" in spec:
args.append("-DTARGET_NATIVE_ARCH:BOOL=True")
else:
args.append("-DTARGET_NATIVE_ARCH:BOOL=False")
if "+lapack" in spec:
args.append("-DUSE_BDSYSTEM_LAPACK:BOOL=True")
else:
args.append("-DUSE_BDSYSTEM_LAPACK:BOOL=False")
if "+petsc" in spec:
args.append("-DUSE_PETSC:BOOL=True")
else:
args.append("-DUSE_PETSC:BOOL=False")
if "+mpi" in spec:
args.append("-DUSE_MPI:BOOL=True")
else:
args.append("-DUSE_MPI:BOOL=False")
args.append("-DBLAS_LIBRARIES=" + spec["blas"].libs.joined(";"))
return args
def setup_run_environment(self, env):
# This recipe exposes a Python package from a C++ CMake project.
# This hook is required to reproduce what Spack PythonPackage does.
env.prepend_path("PYTHONPATH", self.prefix)
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