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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Stringtie(MakefilePackage):
"""StringTie is a fast and highly efficient assembler of RNA-Seq alignments
into potential transcripts."""
homepage = "https://ccb.jhu.edu/software/stringtie"
url = "https://github.com/gpertea/stringtie/archive/v1.3.3b.tar.gz"
license("MIT")
version("2.2.1", sha256="19592aa37e293f4dcd684a4c6e0a1439ee34876d9f22944fb4edceba8c09631b")
version("1.3.4d", sha256="0134c0adc264efd31a1df4301b33bfcf3b3fe96bd3990ce3df90819bad9af968")
version("1.3.4a", sha256="6164a5fa9bf8807ef68ec89f47e3a61fe57fa07fe858f52fb6627f705bf71add")
version("1.3.3b", sha256="30e8a3a29b474f0abeef1540d9b4624a827d8b29d7347226d86a38afea28bc0f")
depends_on("zlib-api")
def build(self, spec, prefix):
make("release")
def install(self, spec, prefix):
mkdirp(prefix.bin)
install("stringtie", prefix.bin)
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