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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Structure(MakefilePackage):
"""Structure is a free software package for using multi-locus genotype
data to investigate population structure."""
homepage = "https://web.stanford.edu/group/pritchardlab/structure.html"
url = "https://web.stanford.edu/group/pritchardlab/structure_software/release_versions/v2.3.4/structure_kernel_source.tar.gz"
version("2.3.4", sha256="f2b72b9189a514f53e921bbdc1aa3dbaca7ac34a8467af1f972c7e4fc9c0bb37")
def url_for_version(self, version):
url = "http://web.stanford.edu/group/pritchardlab/structure_software/release_versions/v{0}/structure_kernel_source.tar.gz"
return url.format(version)
@when("%gcc@10:")
def edit(self, spec, prefix):
filter_file(r"(CFLAGS =.*$)", "\\1 -fcommon", "Makefile")
def install(self, spec, prefix):
mkdirp(prefix.bin)
install("structure", prefix.bin)
install("mainparams", prefix.bin)
install("extraparams", prefix.bin)
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