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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Unblur(AutotoolsPackage):
"""Unblur is used to align the frames of movies recorded on an electron
microscope to reduce image blurring due to beam-induced motion."""
homepage = "https://grigoriefflab.janelia.org/unblur"
url = "http://grigoriefflab.janelia.org/sites/default/files/unblur_1.0.2.tar.gz"
version('1.0.2', sha256='1aa72b1f944114987ede644e1866eaebc08e191ecc566b3461409449360931e2')
variant('openmp', default=True, description='Enable OpenMP support')
variant('shared', default=True, description='Dynamic linking')
depends_on('zlib')
depends_on('jpeg')
depends_on('libtiff')
depends_on('gsl')
depends_on('jbigkit')
depends_on('fftw@3:')
# Requires Intel Fortran compiler
conflicts('%gcc')
conflicts('%pgi')
conflicts('%apple-clang')
conflicts('%clang')
conflicts('%cce')
conflicts('%xl')
conflicts('%xl_r')
conflicts('%nag')
configure_directory = 'src'
def patch(self):
filter_file(r'<<<<<<<.*', '', 'src/missing')
def configure_args(self):
spec = self.spec
return ['FC=ifort',
'F77=ifort',
'--enable-static={0}'
.format('yes' if '~shared' in spec else 'no'),
'--enable-openmp={0}'
.format('yes' if '+openmp' in spec else 'no'),
'--enable-optimisations=yes']
def build(self, spec, prefix):
with working_dir('src'):
make(parallel=False)
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