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# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Unblur(AutotoolsPackage):
"""Unblur is used to align the frames of movies recorded on an electron
microscope to reduce image blurring due to beam-induced motion."""
homepage = "https://grigoriefflab.janelia.org/unblur"
url = "http://grigoriefflab.janelia.org/sites/default/files/unblur_1.0.2.tar.gz"
version("1.0.2", sha256="1aa72b1f944114987ede644e1866eaebc08e191ecc566b3461409449360931e2")
variant("openmp", default=True, description="Enable OpenMP support")
variant("shared", default=True, description="Dynamic linking")
depends_on("zlib-api")
depends_on("jpeg")
depends_on("libtiff")
depends_on("gsl")
depends_on("jbigkit")
depends_on("fftw@3:")
# Requires Intel Fortran compiler
conflicts("%gcc")
conflicts("%pgi")
conflicts("%apple-clang")
conflicts("%clang")
conflicts("%cce")
conflicts("%xl")
conflicts("%xl_r")
conflicts("%nag")
configure_directory = "src"
def patch(self):
filter_file(r"<<<<<<<.*", "", "src/missing")
def configure_args(self):
spec = self.spec
return [
"FC=ifort",
"F77=ifort",
"--enable-static={0}".format("yes" if "~shared" in spec else "no"),
"--enable-openmp={0}".format("yes" if "+openmp" in spec else "no"),
"--enable-optimisations=yes",
]
def build(self, spec, prefix):
with working_dir("src"):
make(parallel=False)
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