1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
|
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import re
from spack.package import *
class Zoltan(AutotoolsPackage):
"""The Zoltan library is a toolkit of parallel combinatorial algorithms
for parallel, unstructured, and/or adaptive scientific
applications. Zoltan's largest component is a suite of dynamic
load-balancing and partitioning algorithms that increase
applications' parallel performance by reducing idle time. Zoltan
also has graph coloring and graph ordering algorithms, which are
useful in task schedulers and parallel preconditioners.
"""
homepage = "https://sandialabs.github.io/Zoltan/"
url = "https://github.com/sandialabs/Zoltan/archive/v3.83.tar.gz"
license("Unlicense")
version("3.901", sha256="030c22d9f7532d3076e40cba1f03a63b2ee961d8cc9a35149af4a3684922a910")
version("3.83", sha256="17320a9f08e47f30f6f3846a74d15bfea6f3c1b937ca93c0ab759ca02c40e56c")
patch("notparallel.patch", when="@3.8")
variant("debug", default=False, description="Builds a debug version of the library.")
variant("shared", default=True, description="Builds a shared version of the library.")
variant("fortran", default=True, description="Enable Fortran support.")
variant("mpi", default=True, description="Enable MPI support.")
variant("parmetis", default=False, description="Enable ParMETIS support.")
variant("int64", default=False, description="Enable 64bit indices.")
depends_on("mpi", when="+mpi")
depends_on("parmetis@4: +int64", when="+parmetis+int64")
depends_on("parmetis@4:", when="+parmetis")
depends_on("metis+int64", when="+parmetis+int64")
depends_on("metis", when="+parmetis")
depends_on("perl@:5.21", type="build", when="@:3.6")
depends_on("autoconf", type="build")
depends_on("automake", type="build")
depends_on("m4", type="build")
conflicts("+parmetis", when="~mpi")
build_directory = "spack-build"
@property
def configure_directory(self):
spec = self.spec
# FIXME: The older Zoltan versions fail to compile the F90 MPI wrappers
# because of some complicated generic type problem.
if spec.satisfies("@:3.6+fortran+mpi"):
raise RuntimeError(
(
"Cannot build Zoltan v{0} with +fortran and "
"+mpi; please disable one of these features "
"or upgrade versions."
).format(self.version)
)
if spec.satisfies("@:3.6"):
zoltan_path = "Zoltan_v{0}".format(self.version)
return zoltan_path
return "."
@property
def parallel(self):
# NOTE: Earlier versions of Zoltan cannot be built in parallel
# because they contain nested Makefile dependency bugs.
return not self.spec.satisfies("@:3.6+fortran")
def autoreconf(self, spec, prefix):
autoreconf = which("autoreconf")
with working_dir(self.configure_directory):
autoreconf("-ivf")
def configure_args(self):
spec = self.spec
config_args = [
self.get_config_flag("f90interface", "fortran"),
self.get_config_flag("mpi", "mpi"),
]
config_cflags = ["-O0" if "+debug" in spec else "-O3", "-g" if "+debug" in spec else ""]
config_ldflags = []
config_libs = []
config_incdirs = []
# PGI runtime libraries
if "%pgi" in spec:
config_ldflags.append("-pgf90libs")
# NVHPC runtime libraries
if "%nvhpc" in spec:
config_ldflags.append("-fortranlibs")
if "+shared" in spec:
config_args.extend(["RANLIB=echo", "--with-ar=$(CXX) -shared $(LDFLAGS) -o"])
config_cflags.append(self.compiler.cc_pic_flag)
if spec.satisfies("%gcc"):
config_libs.append("-lgfortran")
# Although adding to config_libs _should_ suffice, it does not
# Add to ldflags as well
config_ldflags.append("-lgfortran")
if spec.satisfies("%intel"):
config_libs.append("-lifcore")
if "+int64" in spec:
config_args.append("--with-id-type=ulong")
if "+parmetis" in spec:
parmetis_prefix = spec["parmetis"].prefix
config_args.extend(
[
"--with-parmetis",
"--with-parmetis-libdir={0}".format(parmetis_prefix.lib),
"--with-parmetis-incdir={0}".format(parmetis_prefix.include),
]
)
config_ldflags.append("-L{0}".format(spec["metis"].prefix.lib))
config_incdirs.append("-I{0}".format(spec["metis"].prefix.include))
config_libs.append("-lparmetis")
config_libs.append("-lmetis")
# Although appending to config_libs _should_ suffice, it does not
# Add them to ldflags as well
config_ldflags.append("-lparmetis")
config_ldflags.append("-lmetis")
if "+int64" in spec["metis"]:
config_args.append("--with-id-type=ulong")
else:
config_args.append("--with-id-type=uint")
if "+mpi" in spec:
config_args.extend(
[
"CC={0}".format(spec["mpi"].mpicc),
"CXX={0}".format(spec["mpi"].mpicxx),
"--with-mpi={0}".format(spec["mpi"].prefix),
# NOTE: Zoltan assumes that it's linking against an MPI library
# that can be found with '-lmpi' which isn't the case for many
# MPI packages. We rely on the MPI-wrappers to automatically
# add what is required for linking and thus pass an empty
# list of libs
"--with-mpi-libs= ",
]
)
if "+fortran" in spec:
config_args.extend(["FC={0}".format(spec["mpi"].mpifc)])
config_fcflags = config_cflags[:]
config_cxxflags = config_cflags[:]
if spec.satisfies("%gcc@10:+fortran"):
config_fcflags.append("-fallow-argument-mismatch")
# NOTE: Early versions of Zoltan come packaged with a few embedded
# library packages (e.g. ParMETIS, Scotch), which messes with Spack's
# ability to descend directly into the package's source directory.
if config_cflags:
config_args.append("--with-cflags={0}".format(" ".join(config_cflags)))
if config_cxxflags:
config_args.append("--with-cxxflags={0}".format(" ".join(config_cxxflags)))
if config_fcflags:
config_args.append("--with-fcflags={0}".format(" ".join(config_fcflags)))
if config_ldflags:
config_args.append("--with-ldflags={0}".format(" ".join(config_ldflags)))
if config_libs:
config_args.append("--with-libs={0}".format(" ".join(config_libs)))
if config_incdirs:
config_args.append("--with-incdirs={0}".format(" ".join(config_incdirs)))
return config_args
# NOTE: Unfortunately, Zoltan doesn't provide any configuration
# options for the extension of the output library files, so this
# script must change these extensions as a post-processing step.
@run_after("install")
def solib_install(self):
if "+shared" in self.spec:
for lib_path in find(self.spec.prefix.lib, "lib*.a"):
lib_shared_name = re.sub(r"\.a$", ".{0}".format(dso_suffix), lib_path)
move(lib_path, lib_shared_name)
def get_config_flag(self, flag_name, flag_variant):
flag_pre = "en" if "+{0}".format(flag_variant) in self.spec else "dis"
return "--{0}able-{1}".format(flag_pre, flag_name)
|
