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| author | George Young <A-N-Other@users.noreply.github.com> | 2023-06-08 16:49:00 +0100 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-06-08 11:49:00 -0400 |
| commit | 8907e5293391f9d5256a757c47d9bd0c347311bb (patch) | |
| tree | 8dbce566b9ef3c92ef4c785780a4b191fff36473 | |
| parent | 80cefedac5ee28b9659b1770c8a36ae75d1d36e3 (diff) | |
| download | spack-8907e5293391f9d5256a757c47d9bd0c347311bb.tar.gz spack-8907e5293391f9d5256a757c47d9bd0c347311bb.tar.bz2 spack-8907e5293391f9d5256a757c47d9bd0c347311bb.tar.xz spack-8907e5293391f9d5256a757c47d9bd0c347311bb.zip | |
bismark: add 0.24.1, add HISAT2 dependency (#38210)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
| -rw-r--r-- | var/spack/repos/builtin/packages/bismark/package.py | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bismark/package.py b/var/spack/repos/builtin/packages/bismark/package.py index 85a967b8b0..5a5c7d6cc0 100644 --- a/var/spack/repos/builtin/packages/bismark/package.py +++ b/var/spack/repos/builtin/packages/bismark/package.py @@ -13,6 +13,7 @@ class Bismark(Package): homepage = "https://www.bioinformatics.babraham.ac.uk/projects/bismark" url = "https://github.com/FelixKrueger/Bismark/archive/0.23.0.tar.gz" + version("0.24.1", sha256="c5409f5fa470ea5ac07327ced28c60b793f5ef88c5a7bc75b71dde0f52f39894") version("0.23.0", sha256="ea1625808487c1442dbf825d9cbe5c0cbc37ea5bd1460f59e1e0ccc80cc01c9e") version("0.19.0", sha256="91707737f96a0574956a282b635abad7560e7d90bee188a67a7807b2470deae2") version("0.18.2", sha256="83391c5b5af33047178e7774ac25f5a69ce9315c13ae02f016baf7c50b73e702") @@ -20,6 +21,7 @@ class Bismark(Package): depends_on("bowtie2", type="run") depends_on("perl", type="run") depends_on("samtools", type="run") + depends_on("hisat2", type="run", when="@0.21.0:") def install(self, spec, prefix): mkdirp(prefix.bin) |