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| author | Justin S <3630356+codeandkey@users.noreply.github.com> | 2020-04-07 20:41:18 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-04-07 20:41:18 -0500 |
| commit | 998dc7a121088ceed237958942c23b8bfc8cd5e2 (patch) | |
| tree | 70af50816f7b12be22728770219156edec3d80a7 | |
| parent | 7927394fb36f0a55b679ea417fa3829dfe904fcc (diff) | |
| download | spack-998dc7a121088ceed237958942c23b8bfc8cd5e2.tar.gz spack-998dc7a121088ceed237958942c23b8bfc8cd5e2.tar.bz2 spack-998dc7a121088ceed237958942c23b8bfc8cd5e2.tar.xz spack-998dc7a121088ceed237958942c23b8bfc8cd5e2.zip | |
py-cyvcf2: new package at 0.11.7 (#15908)
* py-cyvcf2: new package at 0.11.7
* py-cyvcf2: update dependencies
| -rw-r--r-- | var/spack/repos/builtin/packages/py-cyvcf2/package.py | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-cyvcf2/package.py b/var/spack/repos/builtin/packages/py-cyvcf2/package.py new file mode 100644 index 0000000000..153d00fe29 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-cyvcf2/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyCyvcf2(PythonPackage): + """fast vcf parsing with cython + htslib""" + + homepage = "https://github.com/brentp/cyvcf2" + url = "https://pypi.io/packages/source/c/cyvcf2/cyvcf2-0.11.7.tar.gz" + + version('0.11.7', sha256='a4b6229b89a0a1043684c65cbdd702c366a8800dc3591fb44c4b5a08640cbeec') + + depends_on('python@2.7:', type=('build', 'run')) + depends_on('py-setuptools', type='build') + + depends_on('py-cython@0.23.3:', type='build') + depends_on('py-numpy', type=('build', 'run')) + depends_on('py-coloredlogs', type=('build', 'run')) + depends_on('py-click', type=('build', 'run')) + + depends_on('curl') |