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| -rw-r--r-- | var/spack/repos/builtin/packages/py-cyvcf2/package.py | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-cyvcf2/package.py b/var/spack/repos/builtin/packages/py-cyvcf2/package.py new file mode 100644 index 0000000000..153d00fe29 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-cyvcf2/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyCyvcf2(PythonPackage): + """fast vcf parsing with cython + htslib""" + + homepage = "https://github.com/brentp/cyvcf2" + url = "https://pypi.io/packages/source/c/cyvcf2/cyvcf2-0.11.7.tar.gz" + + version('0.11.7', sha256='a4b6229b89a0a1043684c65cbdd702c366a8800dc3591fb44c4b5a08640cbeec') + + depends_on('python@2.7:', type=('build', 'run')) + depends_on('py-setuptools', type='build') + + depends_on('py-cython@0.23.3:', type='build') + depends_on('py-numpy', type=('build', 'run')) + depends_on('py-coloredlogs', type=('build', 'run')) + depends_on('py-click', type=('build', 'run')) + + depends_on('curl') |