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| author | George Young <A-N-Other@users.noreply.github.com> | 2023-06-26 13:59:05 +0100 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-06-26 14:59:05 +0200 |
| commit | 105ac0c3772ae45cca1f0b28bf4e677bd9703052 (patch) | |
| tree | be0732d94ff0752cb88320a988dc6c2266d69354 /var | |
| parent | 1949f67a7111a810dbc6f5e6d6624e003434c229 (diff) | |
| download | spack-105ac0c3772ae45cca1f0b28bf4e677bd9703052.tar.gz spack-105ac0c3772ae45cca1f0b28bf4e677bd9703052.tar.bz2 spack-105ac0c3772ae45cca1f0b28bf4e677bd9703052.tar.xz spack-105ac0c3772ae45cca1f0b28bf4e677bd9703052.zip | |
mmseqs2: patching to support building with %gcc@13: (#38296)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/mmseqs2/package.py | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/mmseqs2/package.py b/var/spack/repos/builtin/packages/mmseqs2/package.py index 5ff1de3314..a081a416e5 100644 --- a/var/spack/repos/builtin/packages/mmseqs2/package.py +++ b/var/spack/repos/builtin/packages/mmseqs2/package.py @@ -23,6 +23,14 @@ class Mmseqs2(CMakePackage): depends_on("zstd") depends_on("mpi", when="+mpi") + # patch to support building with gcc@13: + patch( + "https://github.com/soedinglab/MMseqs2/commit/3e43617.patch?full_index=1", + sha256="673737ac545260e7800ca191c6eee14feef3318d9cfa5005db32bd2ab3c006fe", + when="%gcc@13:", + level=1, + ) + # apple-clang will build with +openmp with llvm-openmp as a dependency # however when running with real data, it threw segmentation faults conflicts("%apple-clang", when="+openmp") |