diff options
| -rw-r--r-- | var/spack/repos/builtin/packages/perl-bio-ensembl-funcgen/package.py | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/perl-bio-ensembl-funcgen/package.py b/var/spack/repos/builtin/packages/perl-bio-ensembl-funcgen/package.py new file mode 100644 index 0000000000..bede5949f6 --- /dev/null +++ b/var/spack/repos/builtin/packages/perl-bio-ensembl-funcgen/package.py @@ -0,0 +1,37 @@ +# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) +from spack.package import * + + +class PerlBioEnsemblFuncgen(Package): + """Ensembl Funcgen Perl API and SQL schema.""" + + homepage = "http://ensembl.org/info/docs/api/funcgen/index.html" + url = "https://github.com/Ensembl/ensembl-funcgen/archive/release/111.zip" + + maintainers("teaguesterling") + + license("APACHE-2.0", checked_by="teaguesterling") + + version("112", sha256="d7398921779a6865b5e2f0269d51d268f9b8cd96e4ca3577c88e6f34593e683d") + version("111", sha256="67b1b7d6efde9e8be7b4ef73c54c0b5e7e3eadcd590a94bc980984514ef746d0") + version("110", sha256="c9e85a423a8c8653741aed799aea9762fa1dfb301f50dc11d291925e81d7aeee") + + extends("perl") + + depends_on("perl-role-tiny", type=("build", "run")) + depends_on("perl-bio-ensembl") + + variant("sql", default=False, description="Install SQL files") + variant("scripts", default=False, description="Install scripts") + variant("templates", default=False, description="Install templates") + + def install(self, spec, prefix): + install_tree("modules", prefix.lib.perl5) + mkdirp(prefix.share.ensembl.variation) + for extra in ["sql", "scripts", "templates"]: + if spec.satisfies(f"+{extra}"): + target = join_path(prefix.share.ensembl, extra) + install_tree(extra, target) |